BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004480
(750 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439759|ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Vitis vinifera]
gi|297741486|emb|CBI32618.3| unnamed protein product [Vitis vinifera]
Length = 842
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/716 (64%), Positives = 557/716 (77%), Gaps = 17/716 (2%)
Query: 40 LASSSSLSSIPTVHS--SQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESV 97
L +S+S P + S S+ LLS VR DL++ Y+D+A+KL +DGR ++F+ + E++
Sbjct: 36 LLTSTSARLSPPISSLRSRHPLLSDVRWDLNN----YSDLATKLVQDGRFDDFSTMAETL 91
Query: 98 VVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKL 157
++S +S+ +E+V++GI +REGR+ CVV VL+K+++LG+ PLELFDGS +L
Sbjct: 92 ILSGVELSQL-----VELVSAGISGLLREGRVYCVVEVLRKVDKLGICPLELFDGSTLEL 146
Query: 158 LKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV 217
L EC+R+L+ G+VE V L+E+L+ F PVK+L E +++CVNK + NLA+RYACI+
Sbjct: 147 LSKECRRILNCGQVEEVVELIEILDGFHFPVKKLLEPLDFIKICVNKRNPNLAVRYACIL 206
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A ILFC + EFGKKRDL SAL A++ASK+ L PNMY RT+IDVCG+C Y KSR
Sbjct: 207 PHAQILFCTIIHEFGKKRDLGSALTAFEASKQKLIGPNMYCYRTMIDVCGLCSHYQKSRY 266
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
IYE+L +Q +T NIYVFNSLMNVN HDL +T VYKNMQ LGV ADMASYNILLKACC+A
Sbjct: 267 IYEELLAQKITPNIYVFNSLMNVNVHDLSYTFNVYKNMQNLGVTADMASYNILLKACCVA 326
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G LAQEIY EV++LE+ G+LKLDVFTYSTI+KVFADAK WQMALK+KEDMLSAGV PN
Sbjct: 327 GRVDLAQEIYREVQNLESNGMLKLDVFTYSTIIKVFADAKLWQMALKIKEDMLSAGVIPN 386
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+TWS+LI++CANAG+ EQA+ LF+EML AGCEPNSQC NILL ACVEACQ+DRAFRLF+
Sbjct: 387 TVTWSALISSCANAGITEQAIQLFKEMLLAGCEPNSQCYNILLHACVEACQYDRAFRLFQ 446
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SW S+ Q +E K + IT+ PN + NSH+ SF K F F PTTTT
Sbjct: 447 SWKDSRFQEI---SGGTGNGNTVGVELKHQNCITSMPNCLSNSHHLSFSKSFPFTPTTTT 503
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YNILMKAC TDYYR KALM+EM+T GLSPNHISW+ILID CGG+GN+ GA++ILK MRE
Sbjct: 504 YNILMKACGTDYYRAKALMDEMKTAGLSPNHISWSILIDICGGTGNIVGAVRILKTMREA 563
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDVVAYTTAIK CV SK LK AFSLF EMK YQIQPNLVTY TLLRARSRYGSLHEV
Sbjct: 564 GIKPDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVTYNTLLRARSRYGSLHEV 623
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLL 697
QQCLA+YQ M KAGYK+ND YLKELIEEWCEGVIQD N NQ + + R + RPQSLLL
Sbjct: 624 QQCLAIYQHMRKAGYKSNDYYLKELIEEWCEGVIQDNNLNQSKFSSVNRADWGRPQSLLL 683
Query: 698 EKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG---TDEFHIML 750
EKVA HLQKS AE+LAIDL+GLT+VEARI+VLAVLRM+KENY LG D+ I+L
Sbjct: 684 EKVAAHLQKSVAESLAIDLQGLTQVEARIVVLAVLRMIKENYILGHPIKDDILIIL 739
>gi|224068636|ref|XP_002326162.1| predicted protein [Populus trichocarpa]
gi|222833355|gb|EEE71832.1| predicted protein [Populus trichocarpa]
Length = 828
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/699 (64%), Positives = 533/699 (76%), Gaps = 9/699 (1%)
Query: 49 IPTVHSSQTALLSTV----RRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNV 104
IP VHS LLST+ + SS DY+A++ASKLA+DGRL++F MI ESV+ S
Sbjct: 45 IPAVHSRSPPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEP 104
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
S F + LS+ VA GI K++++G +DCVV LKK ELGV+ L+ DG LLK E R
Sbjct: 105 SSFVAALSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKEFIR 164
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP-RADIL 223
+++ G+VE V +ME L F KEL + I+++CV+K + +A+RYA I P IL
Sbjct: 165 IVNCGDVEQVVYIMETLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRIL 224
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN + EFG+K L SAL AYD +K LS PNMY+ RTIIDVCG+CGDYMKSR IYEDL
Sbjct: 225 FCNIISEFGRKGHLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLI 284
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ V N+YVFNSLMNVNAHDL +T V+KNMQ LGV AD+ASYNILLKACC+AG LA
Sbjct: 285 NRKVIPNVYVFNSLMNVNAHDLGYTFSVFKNMQNLGVTADVASYNILLKACCIAGRVDLA 344
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++IY EVK LE+ VLKLDVFTY IVK+FADAK WQMALK+KEDMLS+GVTPN WSS
Sbjct: 345 KDIYREVKQLESAEVLKLDVFTYCMIVKIFADAKMWQMALKIKEDMLSSGVTPNMHIWSS 404
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ACANAGLVEQA+ LFEEML +GC+PNSQCCNILL ACV+ACQ+DRAFRLF+ W S+
Sbjct: 405 LISACANAGLVEQAIQLFEEMLLSGCKPNSQCCNILLHACVQACQYDRAFRLFQCWKGSE 464
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q D+ GN D I EH K N VPNSH+ +F K+F F PT TY++LMK
Sbjct: 465 AQEVFHGDHSGNADEI---EHAQKHC-PNMTTIVPNSHHLNFIKKFPFTPTPATYHMLMK 520
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
AC +DY+R KALM+EM+TVG+SPNHISW+ILID CG SGNV GA+QILK MR G+ PDV
Sbjct: 521 ACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRMAGVEPDV 580
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
VAYTTAIKVCV +K LK AFSLF EMK QI PNLVTY TLLRAR+RYGSL EVQQCLA+
Sbjct: 581 VAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLREVQQCLAI 640
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVH 703
YQDM KAGYK+ND YLK+LIEEWCEGVIQD NQ QG C+RT+ RP+SLLLEKVA H
Sbjct: 641 YQDMRKAGYKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCKRTDLGRPRSLLLEKVAAH 700
Query: 704 LQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
LQ + +ENLAIDL+GLTKVEARI+VLAVLRM+KENY+LG
Sbjct: 701 LQNNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLG 739
>gi|449448705|ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/765 (59%), Positives = 564/765 (73%), Gaps = 24/765 (3%)
Query: 1 MRV--VFGSSSSSSSAIVATQTRLYNHRN-KPNKHPVTKLFPLASSSSLSSIPTVHSSQT 57
MRV + GSSS+S + R Y H + K K ++ L P + SS + S
Sbjct: 1 MRVFLILGSSSASIAG-----PRRYRHSHCKAPKSSLSNLSPTGTHLPFSSHTSTRHSPP 55
Query: 58 ALLSTVRRDLSSRND-------YYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASM 110
ALLS+V D++ + +YA +ASKLA+ G+LE+FAM+VESVVV+ S+F +M
Sbjct: 56 ALLSSVELDIAGASSGGRIPIQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAM 115
Query: 111 LSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGE 170
L++E+VA GI + +REG++ VV VL+K+ ELG++ LEL D + L+ +C+R+ SGE
Sbjct: 116 LAVELVAKGISRCLREGKVWSVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAKSGE 175
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
+E V LMEVL F V+E+ + +++LCV+ + +AIRYA I+P ADILFC + E
Sbjct: 176 LEELVELMEVLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINE 235
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGKKRDL SA AY SK +++ NMYI RTIIDVCG+CGDY KSR IY+DL +QNV N
Sbjct: 236 FGKKRDLKSAYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVIPN 295
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+VFNSLMNVNAHDL +T ++YKNMQ LGV ADMASYNILLKACCLAG LAQ+IY EV
Sbjct: 296 IFVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV 355
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
KHLE GVLKLDVFTYSTIVKVFADAK W+MAL+VKEDM SAGV+PN +TWSSLI++CAN
Sbjct: 356 KHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCAN 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+GLVE A+ LFEEM+ AGCEPN+QCCN LL ACVE QFDRAFRLFRSW + ++ G
Sbjct: 416 SGLVELAIQLFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAFRLFRSW--KEKELWDGI 473
Query: 471 DYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
+ +TD +N++ + NT PN + H SF F+FKPT TTYNILMKAC TD
Sbjct: 474 ERKSSTD--NNLDADSTSQLCNTKMPNAPSHVHQISFVGNFAFKPTITTYNILMKACGTD 531
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
YY KALM EM++VGL+PNHISW+IL+D CG S +VE A+QIL MR G+ PDVVAYTT
Sbjct: 532 YYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRMAGVDPDVVAYTT 591
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
AIKVCV K K AFSLFEEMK ++IQPNLVTY TLLRARS YGSLHEVQQCLA+YQDM
Sbjct: 592 AIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMR 651
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSA 708
K+G+K+ND YLKELI EWCEGVIQ NQ E+T C + + +P+ L+LEKVA HLQKS
Sbjct: 652 KSGFKSNDHYLKELIAEWCEGVIQKNNQQPVEITPCNKIDIGKPRCLILEKVADHLQKSF 711
Query: 709 AENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG---TDEFHIML 750
AE+L IDL+ LTKVEARI+VLAVLRM+KENY+LG D+ I+L
Sbjct: 712 AESLTIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIIL 756
>gi|30679784|ref|NP_195903.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332278227|sp|Q8GYL7.3|PP361_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g02830, chloroplastic; Flags: Precursor
gi|332003140|gb|AED90523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 852
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/753 (56%), Positives = 544/753 (72%), Gaps = 18/753 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNSS-FTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAA 709
AGYK ND +LKELIEEWCEGVIQ+ Q+Q +++ N+ RP SLL+EKVA H+Q+ A
Sbjct: 661 AGYKPNDHFLKELIEEWCEGVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTA 720
Query: 710 ENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
NLAIDL+GLTK+EAR++VLAVLRM+KE+Y G
Sbjct: 721 GNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRG 753
>gi|449521499|ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02830, chloroplastic-like [Cucumis sativus]
Length = 855
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/769 (58%), Positives = 560/769 (72%), Gaps = 26/769 (3%)
Query: 1 MRV--VFGSSSSSSSAIVATQTRLYNHRN-KPNKHPVTKLFPLASSSSLSSIPTVHSSQT 57
MRV + GSSS+S + R Y H + K K ++ L P + SS + S
Sbjct: 1 MRVFLILGSSSASIAG-----PRRYRHSHCKAPKSSLSNLSPTGTHLPFSSHTSTRHSPP 55
Query: 58 ALLSTVRRDLSSRND-------YYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASM 110
ALLS+V D++ + +YA +ASKLA+ G+LE+FAM+VESVVV+ S+F +M
Sbjct: 56 ALLSSVELDIAGASSGGRIPIQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAM 115
Query: 111 LSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGE 170
L++E+VA GI + +REG++ VV VL+K+ ELG++ LEL D + L+ +C+R+ SGE
Sbjct: 116 LAVELVAKGISRCLREGKVWSVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAKSGE 175
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
+E V LMEVL F V+E+ + +++LCV+ + +AIRYA I+P ADILFC + E
Sbjct: 176 LEELVELMEVLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINE 235
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGKKRDL SA AY SK +++ NMYI RTIIDVCG+CGDY KSR IY+DL +QNVT N
Sbjct: 236 FGKKRDLKSAYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVTPN 295
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+VFNSLMNVNAHDL +T ++YKNMQ LGV ADMASYNILLKACCLAG LAQ+IY EV
Sbjct: 296 IFVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV 355
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
KHLE GVLKLDVFTYSTIVKVFADAK W+MAL+VKEDM SAGV+PN +TWSSLI++CAN
Sbjct: 356 KHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCAN 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+GLVE A+ LFEEM+ AGCEPN+QCCN LL ACVE QFDRAFRLFRSW + ++ G
Sbjct: 416 SGLVELAIQLFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAFRLFRSW--KEKELWDGI 473
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ +TD + + + T PN + H SF +FKPT TTYNILMKAC TDYY
Sbjct: 474 ERKSSTDNNLDADSTSQLCTTKMPNAPSHVHQISFVGNLAFKPTITTYNILMKACGTDYY 533
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KALM EM++VGL+PNHISW+IL+D CG S +VE A+QIL MR G+ PDVVAYTTAI
Sbjct: 534 HAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRMAGVDPDVVAYTTAI 593
Query: 591 KVCVRSKRL------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
KV + L K AFSLFEEMK ++IQPNLVTY TLLRARS YGSLHEVQQCLA+Y
Sbjct: 594 KVSIPLAVLVLKXNWKLAFSLFEEMKGFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIY 653
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHL 704
QDM K+G+K+ND YLKELI EWCEGVIQ NQ E+T C + + +P+ L+LEKVA HL
Sbjct: 654 QDMRKSGFKSNDHYLKELIAEWCEGVIQKNNQQPVEITPCNKIDIGKPRCLILEKVADHL 713
Query: 705 QKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG---TDEFHIML 750
QKS AE+L IDL+ LTKVEARI+VLAVLRM+KENY+LG D+ I+L
Sbjct: 714 QKSFAESLTIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIIL 762
>gi|39104565|dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
Length = 852
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/753 (56%), Positives = 544/753 (72%), Gaps = 18/753 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNSS-FTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAA 709
AGYK ND +LKELIEEWCEGVIQ+ ++Q +++ N+ RP SLL+EKVA H+Q+ A
Sbjct: 661 AGYKPNDHFLKELIEEWCEGVIQENGRSQDKISDQEGDNAGRPVSLLIEKVATHMQERTA 720
Query: 710 ENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
NLAIDL+GLTK+EAR++VLAVLRM+KE+Y G
Sbjct: 721 GNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRG 753
>gi|255568444|ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535493|gb|EEF37162.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 786
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/635 (62%), Positives = 482/635 (75%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
+S L + +A GI K++RE +D VV L ++LG+ P +LFD + LLK EC R+++
Sbjct: 41 SSGLHMIALAKGISKNLRERNVDSVVDALNTADQLGLPPSQLFDAASMDLLKTECLRIVN 100
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
G +E + LME L + +KEL E R+++LCV++ + +LA+RYA + P IL C+
Sbjct: 101 FGRLEDIILLMETLAGYSFSIKELVEPSRVIKLCVHQRNPHLAVRYARLFPHEGILMCSI 160
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V++FGKK DL SAL AY+A +H + P+MY+ R +IDVCG+CGDYM+SR I+ED+ SQ V
Sbjct: 161 VKQFGKKGDLDSALAAYEAYMQHSTVPDMYLYRALIDVCGLCGDYMQSRYIFEDIVSQKV 220
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI+VFNSLMNVNAHDL +TL VYK MQ LGV ADM SYNILLK+C LAG LAQ+IY
Sbjct: 221 IPNIFVFNSLMNVNAHDLGYTLHVYKKMQNLGVTADMTSYNILLKSCSLAGKVDLAQDIY 280
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E K LE G+LKLD FTY TI+K+FADAK WQ+ALK+KEDMLS+GVTPNT TWSSLI+A
Sbjct: 281 REAKQLELAGLLKLDDFTYCTIIKIFADAKLWQLALKIKEDMLSSGVTPNTFTWSSLISA 340
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
ANAGLV+QA+ LFEEML AGC PNS CCNILL ACVEACQ+DRAFRLF +W S+ Q
Sbjct: 341 SANAGLVDQAIKLFEEMLLAGCVPNSHCCNILLHACVEACQYDRAFRLFNAWKGSEIQNT 400
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DY+ D IS+ H + I PN NS + SF K+F F P++ TYN LMKAC +
Sbjct: 401 FTTDYNCPVDDISSAMHACEDYIITVPNLASNSLHLSFLKKFPFTPSSATYNTLMKACGS 460
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY R KALM+EM+ VGLSPNHISW+ILID CG SGN+EGA+QILK MR G+ PDV+AYT
Sbjct: 461 DYNRAKALMDEMQAVGLSPNHISWSILIDICGSSGNMEGAIQILKNMRMAGIEPDVIAYT 520
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
TAIKV V SK LK AFSLF EMK YQ++PNLVTY TLLRAR+RYGSL EVQQCLA+YQDM
Sbjct: 521 TAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVTYDTLLRARTRYGSLKEVQQCLAIYQDM 580
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKS 707
KAGYK+ND YLK+LIEEWCEGVIQD +Q Q + C+R RP SLLLEKVA HL +
Sbjct: 581 RKAGYKSNDNYLKQLIEEWCEGVIQDNDQCQDDFKPCKRAEFGRPHSLLLEKVAAHLHHN 640
Query: 708 AAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
AE+L++DL+GLTKVEARI+VLAVLRM+KENY G
Sbjct: 641 VAESLSVDLQGLTKVEARIVVLAVLRMVKENYIQG 675
>gi|356572391|ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 811
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/742 (55%), Positives = 520/742 (70%), Gaps = 41/742 (5%)
Query: 3 VVFGSSSSSSSAIVATQTRLYNHRNKPNKHP-VTKLFPLASSSSLSSIPTVHSSQTALLS 61
V+ GSS + + +T + H KP P + KL P +S+ ++S AL
Sbjct: 5 VILGSSVVTPFSSSSTPHHQHRHPIKPPHKPSLPKLAPFSSNWNIS---------CAL-- 53
Query: 62 TVRRDLSSRNDYYADMASKLAKDGRL-EEFAMIVESVVVSEGNVSKFASMLSLEMVASGI 120
A +A D +L +EF ++ E + S ++ E++A +
Sbjct: 54 ------------QAPLALSHCADSKLVQEFEVVFEDFIDS--------GVVDAELLAKVV 93
Query: 121 VKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEV 180
+ IR ++ V+ L K+ ++ +GS ++ EC RL+ VE V LMEV
Sbjct: 94 LLGIRGKKVRSVIHALNKVQGRRISLSTHLNGS--DIIAKECCRLVTCSHVEEAVELMEV 151
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
L F++ ++EL + I++ CV + LA+RYAC++P A ILFCN + EFGK+RDLVSA
Sbjct: 152 LARFQISIRELVQPSDIIKRCVLSRNPILAVRYACLLPHAHILFCNIISEFGKRRDLVSA 211
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L+AY+ASKKHL++PNMYI R ID CG+C DYMKSR IYEDL +Q +T NIYVFNSLMNV
Sbjct: 212 LKAYEASKKHLNTPNMYIYRATIDTCGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNV 271
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N+HDL +TL +Y+NMQ LG+ DM SYNILLKACC+AG LAQ+IY E+KHLE+ G LK
Sbjct: 272 NSHDLSYTLNLYQNMQNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLK 331
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LDVFTYSTI+KVFAD K WQMALK+K+DMLSAGV+ N + WSSLINACA+AGLVEQA+ L
Sbjct: 332 LDVFTYSTIIKVFADVKLWQMALKIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQL 391
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FEEML AGCEPN+QC NI+L ACVEA Q+DRAFR F SW K + GE Y+ S
Sbjct: 392 FEEMLLAGCEPNTQCFNIILNACVEAYQYDRAFRFFHSWKGKKMLGSSGEGYN------S 445
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
N+ +T+ PN + NSH +F +RF F PTTTTYNIL+KAC TDYY KAL+ EM
Sbjct: 446 NIGQGHMHDVTSIPNGISNSHILNFAERFPFTPTTTTYNILLKACGTDYYHAKALIKEME 505
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
TVGLSPN ISW+ILID CG S NVEGA++ILK M + G+ PDV+AYTTAIKVCV SK
Sbjct: 506 TVGLSPNQISWSILIDICGASSNVEGAIEILKTMGDAGIKPDVIAYTTAIKVCVESKNFM 565
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
QA +L+EEMK YQI+PN VTY TLL+ARS+YG LHEVQQCLA+YQDM KAGYK ND YL+
Sbjct: 566 QALTLYEEMKCYQIRPNWVTYNTLLKARSKYGFLHEVQQCLAIYQDMRKAGYKPNDYYLE 625
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLT 720
ELIEEWCEGVIQ+ + QGE + ++ S+RPQSLLLEK+A HL K A+ LAID++GLT
Sbjct: 626 ELIEEWCEGVIQNNREKQGEFSSSNKSESERPQSLLLEKIAAHLLKRVADILAIDVQGLT 685
Query: 721 KVEARIIVLAVLRMMKENYSLG 742
KVEAR++VLAVLRM+KENY LG
Sbjct: 686 KVEARLVVLAVLRMIKENYGLG 707
>gi|357510555|ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500581|gb|AES81784.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 829
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/677 (57%), Positives = 497/677 (73%), Gaps = 22/677 (3%)
Query: 66 DLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIR 125
+LS RN+ + + + L L+EF ++ + S+ +V E++A+ ++ I+
Sbjct: 40 NLSPRNNSTSLLQTPLI----LKEFETVLHGELDSDVDV---------ELLANAVLIGIQ 86
Query: 126 EGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ + V+ L K+ G++ + L + NEC ++ G +E V LMEVL F+
Sbjct: 87 DRNVRTVIDSLNKVE--GLSEISLSTHLDASAIANECCHMVTCGHIEEAVELMEVLSRFQ 144
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
L + +L + I++ C+ LA+RYA ++P+A +LFC+ + EF K+RDLVSAL+AYD
Sbjct: 145 LSIAKLVQPSDIIKRCILSRKPTLAVRYASLLPQAPVLFCSIISEFSKRRDLVSALKAYD 204
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
A KK+L PNMYI R IID CG+CGD+MKSR IYEDL +Q +T NIYVFNSLMNVNAHDL
Sbjct: 205 ALKKNLKGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNAHDL 264
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++L +Y+NMQKLG+ DMASYNILLKACC+AG +AQ++Y ++KHLE+ G LKLDVFT
Sbjct: 265 SYSLNLYQNMQKLGLKPDMASYNILLKACCVAGRVDVAQDMYRDLKHLESVGQLKLDVFT 324
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YSTI+KVFADAK WQMALK+K DMLSAGV+ NTI WSSLINACA+AGLVEQA+ LFEEML
Sbjct: 325 YSTIIKVFADAKLWQMALKIKRDMLSAGVSLNTIAWSSLINACAHAGLVEQAIQLFEEML 384
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AGCEPN+QC NI+L ACVE CQ+DRAFRLF SW SK V L E + SN E
Sbjct: 385 LAGCEPNTQCFNIILHACVEGCQYDRAFRLFHSWKGSKMLVPLDESCN------SNSEQG 438
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
++T P + +SH SF +RF F PTTTTYNIL+KAC T+YY KAL+NEMRTVGLS
Sbjct: 439 GMHNVTTVPTGISSSHILSFTERFPFTPTTTTYNILLKACGTNYYHAKALINEMRTVGLS 498
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ISW+ILI+ CG S NV+G ++IL+ M + G+ PDV++YTTAIKVCV SK QA +L
Sbjct: 499 PNQISWSILINICGASENVDGVIEILRTMVDAGIKPDVISYTTAIKVCVESKNFTQALTL 558
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ EMK Y PNLVTY TLLRARS+YGSL EVQQ LA+YQDM KAGYK+ND YL+ELIEE
Sbjct: 559 YREMKSYGTHPNLVTYNTLLRARSKYGSLREVQQGLAIYQDMRKAGYKSNDYYLEELIEE 618
Query: 666 WCEGVIQDKNQNQG-EVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEA 724
WCEGVIQD + +G E + +++ +RPQSLLLEK+A HL K A+ LAID++GLTKVEA
Sbjct: 619 WCEGVIQDNEEYEGEEFSSSKKSEIERPQSLLLEKIASHLLKRVADILAIDVQGLTKVEA 678
Query: 725 RIIVLAVLRMMKENYSL 741
R+++LAVLRM+KENY++
Sbjct: 679 RLVILAVLRMIKENYAI 695
>gi|7413558|emb|CAB86037.1| putative protein [Arabidopsis thaliana]
Length = 798
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/757 (49%), Positives = 488/757 (64%), Gaps = 80/757 (10%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNSS-FTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIR + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIR--------------IIHGFG 229
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 230 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 289
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 290 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 349
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 350 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 409
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 410 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 469
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 470 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 526
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 527 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 586
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK EM+ YQI+PN DM
Sbjct: 587 IK----------------EMRRYQIKPNW---------------------------DMRN 603
Query: 650 AGYKAN----DTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQ 705
AGY+ T++ L + VIQ+ Q+Q +++ N+ RP SLL+EKVA H+Q
Sbjct: 604 AGYEQFLLLWSTFI-SLPDGSATRVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQ 662
Query: 706 KSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
+ A NLAIDL+GLTK+EAR++VLAVLRM+KE+Y G
Sbjct: 663 ERTAGNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRG 699
>gi|115452331|ref|NP_001049766.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|108707551|gb|ABF95346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|108707553|gb|ABF95348.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548237|dbj|BAF11680.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|215686909|dbj|BAG90779.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/711 (45%), Positives = 451/711 (63%), Gaps = 28/711 (3%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E + S ++T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PNLVTY TLL AR++Y
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNKY 609
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQR 691
GSL EVQQCLA+YQ+M KAGY+AND YLK LI EWCEGV+ N N+ L +R S +
Sbjct: 610 GSLQEVQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKESFK 669
Query: 692 PQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
L+LEKV LQK +N +D+RGL+KVE+R++VL+VLR +KE Y LG
Sbjct: 670 ---LVLEKVTTFLQKDVDQNQTVDVRGLSKVESRVVVLSVLRKIKEKYLLG 717
>gi|242036071|ref|XP_002465430.1| hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor]
gi|241919284|gb|EER92428.1| hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor]
Length = 821
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/670 (47%), Positives = 432/670 (64%), Gaps = 13/670 (1%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCV 132
YYA +AS LA GRL +F + E + + G+ FA+ +S +++ G+ ++RE + V
Sbjct: 62 YYARVASNLAGAGRLRDFLLAAEGLRAAAGDDPSFAARISARLLSRGVAAAVRERGLPFV 121
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
+ + + V +E+ D + C+ LL+ + FV ++E L + V+ +
Sbjct: 122 LEFFRDAERVRVPAVEMLDADASDTVAGACRMLLEERRMVEFVEVVEALARYGFYVQGIV 181
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
++++ V + + ++AIRYA I P + +L CN + FGK+++L +AL + A K L
Sbjct: 182 NPMDVLKIFVKQRNPDIAIRYARIFPNSQLLLCNTMEAFGKRKELKNALLVFGALKDQLG 241
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
NM+ CR+IID+CG CG +++R I+E L + +T N YVFNSLMNVNA+ L + VY
Sbjct: 242 GINMFACRSIIDICGHCGSSVQARIIFEGLLADKITPNTYVFNSLMNVNAYSLSYNFSVY 301
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K+MQ L V D+ SYNILLK CC A LAQEIY E+K E G+LKLDVFTYST++KV
Sbjct: 302 KHMQNLSVPPDLTSYNILLKTCCNAREFNLAQEIYEEMKKKERNGLLKLDVFTYSTMIKV 361
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FADAK W+MA +KEDM G+ N +TWSSLIN AN+GLV++A+ + EEM++ GC+P
Sbjct: 362 FADAKVWKMASNIKEDMQVNGIRLNLVTWSSLINVYANSGLVDRAIEILEEMIRDGCQPT 421
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ C NI+L ACV++CQ+DRAFRLF SW S +++L + D K+ S +
Sbjct: 422 APCFNIILTACVKSCQYDRAFRLFYSWKESGIKISLSPEQKRGLDGGFTF-CKEYPSSGS 480
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
T VP F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+
Sbjct: 481 TILVVP------------FRPTVTTYNILMKACGTNAERAKSVMNEMRRNGLCPDLISWS 528
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+D G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +
Sbjct: 529 ILMDIYGTSQNRDGAVQALRRMQRVGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTH 588
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
Q++PNLVTY TLL ARS YGSL EVQQCLA+YQ+M KAGY+AND YLKELI EWCEGV+
Sbjct: 589 QLKPNLVTYKTLLAARSNYGSLLEVQQCLAIYQEMRKAGYQANDYYLKELIMEWCEGVLS 648
Query: 673 DKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVL 732
+ NQ L + + +L LEKV LQK +N +D+RGL+KVEARI+VL+VL
Sbjct: 649 SRGDNQDFYNLDLQPKRKESFNLFLEKVVTVLQKDTDQNQTVDVRGLSKVEARIVVLSVL 708
Query: 733 RMMKENYSLG 742
R +KE Y LG
Sbjct: 709 RKIKEQYLLG 718
>gi|326533124|dbj|BAJ93534.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534390|dbj|BAJ89545.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 837
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/728 (44%), Positives = 455/728 (62%), Gaps = 30/728 (4%)
Query: 29 PNKHPVTKLFPLASS----SSLSSIPTVHSSQTA--------LLSTVRRDLSSRNDYYAD 76
PN +P K+ PL S S + PT + + + LLS V + S+ DYY+
Sbjct: 35 PNPNPKAKVIPLLSDVGRLQSATPTPTPNGNPNSNPKGKVLPLLSDVGSNPSAI-DYYSR 93
Query: 77 MASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVL 136
+AS LA GRL +F + E + + G+ FA+ ++ +++ G+V ++RE + V+ L
Sbjct: 94 VASNLAGAGRLGDFLIAAEGLRAASGDAG-FAARINWRLLSRGVVAALREHGLPHVLEFL 152
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ + +GV + D + C++LLD + FV +E L VK + +
Sbjct: 153 RDADRIGVHAAVMLDADASDAIAAACRKLLDDRIMAEFVEAIEALASCGFFVKGIVDPMD 212
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D ++AIRYA I P + +L CN + FGK+++L AL+ + A K L NM
Sbjct: 213 VLKIFVRKRDPDMAIRYARIFPHSQLLLCNTMEAFGKRKELKYALKVFGALKDQLGGINM 272
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+C CG +++R I+E L ++ +T N +VFNSLMN NAH + + VYK+MQ
Sbjct: 273 FACRSIIDICSHCGSSVQARIIFEGLLAEKITPNTHVFNSLMNANAHSMSYNFSVYKHMQ 332
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KLGV D+ASYNILLK CC A AQEIY E+K E G+LKLDVFTYST++KVFA+A
Sbjct: 333 KLGVRPDLASYNILLKTCCNAREFNTAQEIYEEMKKKENDGILKLDVFTYSTMMKVFAEA 392
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W+MA +K+DM + G N +TWSSLINA AN+GL++ A+ + EEM++ GC+P + C
Sbjct: 393 KMWKMASNIKDDMRAVGARLNLVTWSSLINAYANSGLIDGAIEILEEMIRDGCQPTAPCF 452
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TP 494
NI+L A V++CQ+DRAFRLF SW +V+L + G+ N ++ TN T
Sbjct: 453 NIILTALVKSCQYDRAFRLFNSWMEFGIKVSLSLEQKGSLP--DNFTFCEEHPSTNGGTI 510
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
VP F+PT TTYNILM AC T+ R K++MNEM+ GL P+ ISW+IL
Sbjct: 511 LVVP------------FRPTVTTYNILMMACGTNDERAKSVMNEMKRNGLCPDRISWSIL 558
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+D G S N GA+Q L+ M+ G+ +V AYT AIK CV SK LK A LFEEMK +Q+
Sbjct: 559 MDIYGTSQNRNGAIQALRRMQRVGIKLNVSAYTVAIKACVESKDLKLALHLFEEMKAHQL 618
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+PN+VTY TLL ARS+YGSL E+Q+CLA+YQ+M +AGY+A D YLKELI EW EGV+
Sbjct: 619 KPNMVTYRTLLTARSKYGSLKEIQKCLAIYQEMRQAGYQAYDYYLKELIVEWSEGVLSSD 678
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRM 734
N+ L R+ +L LEKVA LQK +N +D+RGL+KVEARI+VL+ LR
Sbjct: 679 GGNRNFYHLDRKDERNESFNLFLEKVARFLQKDVDQNQTVDVRGLSKVEARIVVLSTLRK 738
Query: 735 MKENYSLG 742
+KE + LG
Sbjct: 739 IKEKHLLG 746
>gi|357112772|ref|XP_003558181.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Brachypodium distachyon]
Length = 849
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/726 (43%), Positives = 450/726 (61%), Gaps = 27/726 (3%)
Query: 29 PNKHPVTKLFP-------LASSSSLSSI-----PTVHSSQTALLSTVRRDLSSRNDYYAD 76
PN K+ P L S++S S+ P++ + LLS V + S+ +YY+
Sbjct: 35 PNPKAKAKVIPVLSDVGRLQSATSTSTPNGNPNPSLKAKVLPLLSDVGSNPSAI-EYYSR 93
Query: 77 MASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVL 136
+AS LA GRL +F + E + + G+ FA+ +S +++ G+V ++ + + V+ L
Sbjct: 94 VASNLAGAGRLGDFLIAAEGLRAASGDAG-FAARISWRVLSRGVVVALGQHGLPHVLEFL 152
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ + +G+ + D + C++LL+ + FV +E L VK + +
Sbjct: 153 RDADRIGLHAAAMLDADASDAVAAACRQLLEERIMTEFVKAIEDLANCGFFVKGIVDPMD 212
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D ++AIRYA I P + +L CN + FGK+++L AL+ + A K L NM
Sbjct: 213 VLKIFVKKRDPDMAIRYARIFPHSQLLLCNTMEAFGKRKELKHALKVFGALKDQLGGINM 272
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+C CG +++R I+E L ++ +T N +VFNSLMN NAH L + L VYK+MQ
Sbjct: 273 FACRSIIDICSHCGSSVQARIIFEGLLAEKITPNTHVFNSLMNANAHSLSYNLSVYKHMQ 332
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KLGV D+ASYNILLK CC A AQEIY E+K E G+LKLDVFTYST++KVFA+A
Sbjct: 333 KLGVSPDLASYNILLKTCCNAREFDSAQEIYEEMKKKEQNGLLKLDVFTYSTMMKVFAEA 392
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W+MA +KEDM + G N +TWSSLINA AN+GLV+ A+ + EEM++ GC+P + C
Sbjct: 393 KMWKMASNIKEDMRAVGARLNLVTWSSLINAYANSGLVDGAIEILEEMIRDGCQPTAPCF 452
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
NI+L A V++ Q+DRAFRLF SW S +++L + G + S T
Sbjct: 453 NIILTALVKSRQYDRAFRLFYSWKESGIRISLSLEQKGCLPDNFTFCKEHPSSNGGTILE 512
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
VP F+PT TTYNILM AC T+ R +++MNEMR GL P+ ISW+IL+D
Sbjct: 513 VP------------FRPTVTTYNILMMACGTNDERARSIMNEMRRNGLCPDRISWSILMD 560
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G S N GA+Q L+ M+ G+ +V AYT AIK CV SK L A LFEEMK +Q++P
Sbjct: 561 IYGTSQNRNGAIQALRRMQRVGIKLNVSAYTVAIKACVESKDLNTALHLFEEMKAHQLKP 620
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
N+VTY TLL AR +YGSL E+QQCLA+YQ+M KAGY+A D YLKELI EW EGV+ ++
Sbjct: 621 NMVTYRTLLTARCKYGSLQEIQQCLAIYQEMRKAGYQAYDYYLKELIVEWSEGVLSSESV 680
Query: 677 NQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMK 736
N+ E + + +L LEKVA LQK +N +D+RGL+KVEARI+VL+ LR +K
Sbjct: 681 NR-EFYRLDLKDKRDKFNLFLEKVARFLQKDVDQNQTVDIRGLSKVEARIVVLSTLRKIK 739
Query: 737 ENYSLG 742
E LG
Sbjct: 740 EKCHLG 745
>gi|218192576|gb|EEC75003.1| hypothetical protein OsI_11066 [Oryza sativa Indica Group]
Length = 668
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/587 (43%), Positives = 360/587 (61%), Gaps = 25/587 (4%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E + S ++T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PNL
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNL 596
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I +D++S V LN+ ++SL+N A+ + +E+ + M + G +NI+L C
Sbjct: 376 IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCV 435
Query: 336 LAGNTVLAQEIYGEVKHL--------EAKGVL----------------------KLDVFT 365
+ A ++ + K E KG + V T
Sbjct: 436 KSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCEEHTSNSSTLLVVPFRPTVTT 495
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++K A + A V +M G+ P+ I+WS L++ ++ + A+ M
Sbjct: 496 YNILMK--ACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQ 553
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED----YDGNTDR 478
+ G + N + ++ACVE A LF + + LG++ YD D+
Sbjct: 554 RVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLGQESHDSYDQQVDQ 610
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI-- 570
P +N LM + ++ M+ +G+ P+ S+ IL+ C + + A +I
Sbjct: 280 PNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYE 339
Query: 571 -LKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+K ++G+ DV Y+T +KV +K K A + ++M+ ++ NLVT+ +L+ A
Sbjct: 340 EIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINA- 398
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
Y + V + + + ++M + G
Sbjct: 399 --YANSGLVDRAIEILEEMTRDG 419
>gi|27476073|gb|AAO17004.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 572
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/561 (42%), Positives = 339/561 (60%), Gaps = 25/561 (4%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E S +T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCEEHTSNS--STLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKV 592
+ M+ GM +V AYT AIKV
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKV 570
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 339 NTVLAQEIYGEVKH-LEAKGVLK-----LDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
NT+ A E+KH L G LK +++F +I+ + A + E +L+
Sbjct: 217 NTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSSVQARIIFEGLLAD 276
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+TPN ++SL+N NA +++ M G P+ NILL+ C A ++ A
Sbjct: 277 KITPNVYVFNSLMNV--NAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLA 334
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ ++ K++ + F YS+ K F+
Sbjct: 335 QEIYE-----------------------EIKKKEQNGLLKLDVFT----YSTMMKVFA-- 365
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ M +D + +M++ G+ N ++W+ LI+A SG V+ A++IL+
Sbjct: 366 ------DAKMWKLASD------IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILE 413
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
M DG P + + CV+S + +AF LF + K Y ++ +L
Sbjct: 414 EMTRDGCQPTAPCFNIILTGCVKSCQYDRAFRLFYDWKEYGVKISL 459
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ----IQPNLVTYIT 623
+ K M+ G+ PD+ +Y +K C +K K A ++EE+K + ++ ++ TY T
Sbjct: 300 FSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYST 359
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+++ + + + QDM AG + N LI + + D+
Sbjct: 360 MMKV---FADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDR 407
>gi|222624701|gb|EEE58833.1| hypothetical protein OsJ_10405 [Oryza sativa Japonica Group]
Length = 483
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/423 (50%), Positives = 285/423 (67%), Gaps = 15/423 (3%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D N+AIRYA I P++ +L CN + FGK+++L AL + A K NM
Sbjct: 3 VLKIFVKKRDPNMAIRYARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINM 62
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+CG CG +++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ
Sbjct: 63 FACRSIIDICGHCGSSVQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQ 122
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
LGV D+ SYNILLK CC A LAQEIY E+K E G+LKLDVFTYST++KVFADA
Sbjct: 123 NLGVPPDLTSYNILLKTCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADA 182
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W++A +K+DM SAGV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C
Sbjct: 183 KMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCF 242
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPN 495
NI+L CV++CQ+DRAFRLF W +++L + G D S E + S ++T
Sbjct: 243 NIILTGCVKSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLL 300
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
VP F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+
Sbjct: 301 VVP------------FRPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILM 348
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++
Sbjct: 349 DIYGSSQNRDGAIQALRRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLK 408
Query: 616 PNL 618
PNL
Sbjct: 409 PNL 411
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 43/252 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I +D++S V LN+ ++SL+N A+ + +E+ + M + G +NI+L C
Sbjct: 191 IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCV 250
Query: 336 LAGNTVLAQEIYGEVKHL--------EAKGVL----------------------KLDVFT 365
+ A ++ + K E KG + V T
Sbjct: 251 KSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCEEHTSNSSTLLVVPFRPTVTT 310
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++K A + A V +M G+ P+ I+WS L++ ++ + A+ M
Sbjct: 311 YNILMK--ACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQ 368
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED----YDGNTDR--- 478
+ G + N + ++ACVE A LF + + LG++ YD D+
Sbjct: 369 RVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLGQESHDSYDQQVDQRTY 428
Query: 479 --ISNMEHKDKQ 488
S+ HK Q
Sbjct: 429 AAWSDQAHKKHQ 440
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI-- 570
P +N LM + ++ M+ +G+ P+ S+ IL+ C + + A +I
Sbjct: 95 PNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYE 154
Query: 571 -LKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+K ++G+ DV Y+T +KV +K K A + ++M+ ++ NLVT+ +L+ A
Sbjct: 155 EIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAY 214
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G V + + + ++M + G
Sbjct: 215 ANSGL---VDRAIEILEEMTRDG 234
>gi|413956099|gb|AFW88748.1| hypothetical protein ZEAMMB73_433087 [Zea mays]
gi|413956100|gb|AFW88749.1| hypothetical protein ZEAMMB73_433087 [Zea mays]
Length = 487
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/399 (53%), Positives = 273/399 (68%), Gaps = 23/399 (5%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K E G+LKLDVFTYST++KVFADAK W+MA +KEDM + GV N +TWSSLINA A
Sbjct: 1 MKKKERDGLLKLDVFTYSTMMKVFADAKMWKMASNIKEDMQANGVRLNLVTWSSLINAYA 60
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+GLV++A+ + +EM++ GC+P + C NI+L ACV++CQ+DRAFRLF SW S +++L
Sbjct: 61 NSGLVDRAIEILKEMIRDGCQPTAPCFNIILTACVKSCQYDRAFRLFYSWKESGIKISLS 120
Query: 470 ED----YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+ DG + D +T VP F+PT TTYNILMKAC
Sbjct: 121 SEQKRVIDGGFTFCKEYPNND-----STILVVP------------FRPTVTTYNILMKAC 163
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T+ R K+ MNEMR GL P+ ISW+ILID G S N +GA+Q L+ M+ GM +V A
Sbjct: 164 GTNAERAKSTMNEMRRNGLCPDLISWSILIDIYGSSQNRDGAVQALRRMQRVGMRLNVSA 223
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT AIK CV +K LK A LFEEMK +Q++PNLVTY TLL AR YGSL EVQQCLA+YQ
Sbjct: 224 YTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAARINYGSLQEVQQCLAIYQ 283
Query: 646 DMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQS--LLLEKVAVH 703
+M KAG++AND YLKELI EWCEGV+ ++ NQ L + ++R +S L LEKV
Sbjct: 284 EMRKAGFQANDYYLKELIVEWCEGVLSSRSDNQDFYNLDLQPETERKESFNLFLEKVVTV 343
Query: 704 LQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
LQK +N +D+RGL+KVEARI+VL+VLR +KE Y LG
Sbjct: 344 LQKDTDQNQIVDVRGLSKVEARIVVLSVLRKIKEQYLLG 382
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YNIL+KAC N A+ E++ + L D+ ++S ++ ++ ++ A+
Sbjct: 153 VTTYNILMKAC--GTNAERAKSTMNEMR----RNGLCPDLISWSILIDIYGSSQNRDGAV 206
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M G+ N ++ I AC ++ A+HLFEEM +PN LL A
Sbjct: 207 QALRRMQRVGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAA 265
>gi|168055626|ref|XP_001779825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668737|gb|EDQ55338.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 734
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 342/618 (55%), Gaps = 16/618 (2%)
Query: 39 PLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVV 98
P S S+L+ T+ + +RR YY +A +LA +G + +F +++ +
Sbjct: 99 PSTSESALAQFETISPEDVKV--CLRR--KGMLKYYTLLAGQLASEGYMTQFTELLQMLA 154
Query: 99 VSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL 158
+ + F L + G + ++D V +L+ L + G S LL
Sbjct: 155 DAGIDKELFTYKLDTAQLNIGFRLLLSRQQLDLFVSILRNLTKAGYTAPNFVQKSTLDLL 214
Query: 159 KNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP 218
+E L+ +G E V L+E L E V+ L + +V C +++LA R+ ++
Sbjct: 215 ADELLSLVKAGRTEFCVELVEYLTESGFFVRNLIDPVSVVSSCAKLRNIDLARRFVELLS 274
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
R + +REF + +L S + D K+ P+++ R +ID CG + K+ +
Sbjct: 275 RNPWHYNLIIREFSRHGNLRSCFKVLDFMKELGVMPDVFTYRVLIDSCGRHKEPSKATIV 334
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+E + + N +V+NS+MNVN +L +++MQ G+ AD+ SYNILLKA +G
Sbjct: 335 FEKMLNDGFEPNRFVYNSIMNVNVGNLSEVRRYFQHMQGAGIAADVTSYNILLKAYAASG 394
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA ++Y ++K G + LDV YST++ VF AK W+ AL+VK DML AGVTPN
Sbjct: 395 RADLAGDLYAQIKK---AGKVTLDVVFYSTLINVFGKAKMWEEALRVKADMLEAGVTPNV 451
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+TW+S+I ACA AGLV+Q+ F+EML AGC PN C N+LLQAC+ A QFDRAF LF
Sbjct: 452 VTWTSIIGACATAGLVDQSFREFDEMLNAGCRPNVNCYNMLLQACIMASQFDRAFLLFEE 511
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF---DKRFS-FKPT 514
W + + E ++ S K + IT P + S+ D R + +P
Sbjct: 512 WKTTGRMRSYSEIFN-----YSAPLAKTHELITVIPGSLLQSNLGEKIDEDVRLACCRPN 566
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN +MKAC + +V++LM EMR +GL P+ SW+IL+D+ G G+VEGA + L+ M
Sbjct: 567 IITYNCMMKACGSASEKVRSLMREMRALGLVPDVKSWSILLDSYGSKGDVEGASEALEEM 626
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PDVVAYT+ I+ CV++ L++AF F +MK ++PN VTY +LLR YG+L
Sbjct: 627 KAAGFKPDVVAYTSLIQACVQAGHLEKAFDYFSKMKAAGVRPNAVTYNSLLRRHRNYGTL 686
Query: 635 HEVQQCLAVYQDMWKAGY 652
EVQ+ LA+Y++M +AG+
Sbjct: 687 PEVQRALALYEEMREAGH 704
>gi|108707552|gb|ABF95347.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215765857|dbj|BAG87554.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 451
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 249/365 (68%), Gaps = 18/365 (4%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W++A +K+DM SAGV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI
Sbjct: 2 WKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNI 61
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFV 497
+L CV++CQ+DRAFRLF W +++L + G D S E + S ++T V
Sbjct: 62 ILTGCVKSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVV 119
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D
Sbjct: 120 P------------FRPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDI 167
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PN
Sbjct: 168 YGSSQNRDGAIQALRRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPN 227
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
LVTY TLL AR++YGSL EVQQCLA+YQ+M KAGY+AND YLK LI EWCEGV+ N N
Sbjct: 228 LVTYKTLLTARNKYGSLQEVQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGN 287
Query: 678 QGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKE 737
+ L +R S + L+LEKV LQK +N +D+RGL+KVE+R++VL+VLR +KE
Sbjct: 288 REYYQLDQRKESFK---LVLEKVTTFLQKDVDQNQTVDVRGLSKVESRVVVLSVLRKIKE 344
Query: 738 NYSLG 742
Y LG
Sbjct: 345 KYLLG 349
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +N LM + + V M++ G+ D+ S++IL+ + G++ +
Sbjct: 125 VTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMD---IYGSSQNRDGAIQAL 181
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ G +KL+V Y+ +K + K ++AL + E+M + + PN +T+ +L+ A
Sbjct: 182 RRMQRVG-MKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNK 240
Query: 411 AGL---VEQAMHLFEEMLQAGCEPNSQCC-NILLQAC----------VEACQFDRAFRLF 456
G V+Q + +++EM +AG + N N++++ C E Q D+ F
Sbjct: 241 YGSLQEVQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKESF 300
Query: 457 RSWTLSKTQVALGEDYDGN 475
+ L K L +D D N
Sbjct: 301 K-LVLEKVTTFLQKDVDQN 318
>gi|302769928|ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
gi|300164027|gb|EFJ30637.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
Length = 532
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 295/530 (55%), Gaps = 40/530 (7%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVV--VSEGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y A +LA+ GRL E +V+ + + G+ F ++ + V G V + + R+
Sbjct: 26 FYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHAVRDGCVSVLEQRRLP 85
Query: 131 CVVGVLKKLNELGVA-PLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
+V + L+E+G++ P + G +L+ +EC RLL VE + +E L + VK
Sbjct: 86 YLVEFCRALSEMGISSPSDYLGRYGLQLVIDECGRLLQENRVEECIRCLERLAKCGFVVK 145
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF-CNFV-REFGKKRDLVSALRAYDAS 247
L + ++ C + LA+RYAC++P DIL CN + ++F + DL S + + A
Sbjct: 146 NLVKPTLCMEACARMHNTALALRYACLLP--DILHSCNMIMQKFRDQGDLQSVFQVFQAL 203
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ P+MY +ID CG CGD K+ AI+E L LN+YV NS+MN +A +++
Sbjct: 204 ESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVCNSMMNAHAGNIQH 263
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L +Y+ MQ G+ AD+ +YNI+ KAC L+ N VLA +Y E+K E +KL+V +Y
Sbjct: 264 VLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE----IKLNVLSYG 319
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++++F +AK ++K DM S G+ PN +TW+SL+ AC+ LVE+ + ++++M+QA
Sbjct: 320 TLIQIFGEAKMLDRVFQMKRDMDSTGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQA 379
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN+ N LL ACV+ Q D+A +LFR W S +A +E +D+
Sbjct: 380 GCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA-------------GIEVQDE 426
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
I +S + +P + YN +M+AC + +A+M EM + GL P+
Sbjct: 427 SVI-----------FSEW-----VRPDSVAYNTMMRACDKLPKQAEAVMQEMVSSGLRPD 470
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
SW ILI++ G +G+ +GA+Q + M + G+ DVVAYT IKV +SK
Sbjct: 471 KRSWCILINSYGCNGDKQGAVQAFQRMGKSGIIADVVAYTAIIKVRFKSK 520
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 147/368 (39%), Gaps = 55/368 (14%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ ++ + ++AC NT LA L +L + + + I++ F D
Sbjct: 143 VVKNLVKPTLCMEACARMHNTALA---------LRYACLLPDILHSCNMIMQKFRDQGDL 193
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q +V + + S GV P+ ++ LI+AC G E+A +FE +L+AG N CN +
Sbjct: 194 QSVFQVFQALESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVCNSM 253
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A A RL+R S G D T I + ++ P
Sbjct: 254 MNA--HAGNIQHVLRLYRQMQGS------GIAADVTTYNIVFKACR----LSKNPVLALR 301
Query: 500 SHYSSFDKRFSFKPTT--TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ K + T I +A D RV + +M + G+ PN ++WT L+ A
Sbjct: 302 LYEELKAKEIKLNVLSYGTLIQIFGEAKMLD--RVFQMKRDMDSTGIVPNVVTWTSLVGA 359
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK------- 610
C VE LQ+ + M + G +P+ Y + CV + +A LF E K
Sbjct: 360 CSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA 419
Query: 611 -----------HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++P+ V Y T++RA + +Q AV Q+M +G + +
Sbjct: 420 GIEVQDESVIFSEWVRPDSVAYNTMMRACDKLP-----KQAEAVMQEMVSSGLRPDK--- 471
Query: 660 KELIEEWC 667
WC
Sbjct: 472 ----RSWC 475
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
N +M A + V L +M+ G++ + ++ I+ AC S N AL++ + ++
Sbjct: 251 NSMMNAHAGNIQHVLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE 310
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ +V++Y T I++ +K L + F + +M I PN+VT+ +L+ A S+ G+L V+
Sbjct: 311 IKLNVLSYGTLIQIFGEAKMLDRVFQMKRDMDSTGIVPNVVTWTSLVGACSK-GAL--VE 367
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ L VYQDM +AG N L+ +G DK
Sbjct: 368 KTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDK 403
>gi|302765062|ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
gi|300166766|gb|EFJ33372.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
Length = 533
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 294/531 (55%), Gaps = 41/531 (7%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVV--VSEGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y A +LA+ GRL E +V+ + + G+ F ++ + V G V + + R+
Sbjct: 26 FYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHAVRDGCVSVLEQRRLP 85
Query: 131 CVVGVLKKLNELGVA-PLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
VV + L+ELG++ P + G +L+ +EC RLL VE + +E L + VK
Sbjct: 86 YVVEFCRALSELGISSPSDYLGRYGLQLVIDECGRLLQENRVEECIRCLERLAKCGFVVK 145
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-FCNFV-REFGKKRDLVSALRAYDAS 247
L + ++ C + LA+RYAC++P DIL CN + ++F + DL S + + A
Sbjct: 146 NLVKPTLCMEACARMHNTALALRYACLLP--DILQSCNMIMQKFRDQGDLQSVFQVFQAL 203
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ P+MY +ID CG CGD K+ AI+E L LN+YV NS+MN +A +++
Sbjct: 204 ESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVCNSMMNAHAGNIQH 263
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L +Y+ MQ G+ AD+ +YNI+ KAC L+ N VLA +Y E+K E +K++V +Y
Sbjct: 264 VLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE----IKMNVLSYG 319
Query: 368 TIVKV-FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
T+++V F +AK ++K DM S G+ PN +TW+SL+ AC+ LVE+ + ++++M+Q
Sbjct: 320 TLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQ 379
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AGC PN+ N LL ACV+ Q D+A +LFR W S +A +E +D
Sbjct: 380 AGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA-------------GIEVQD 426
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
+ +I +S + +P + YN +M+AC + +A+M EM + GL P
Sbjct: 427 ESAI-----------FSEW-----VRPDSVAYNTMMRACDKLPKQAEAVMQEMVSSGLRP 470
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+ SW ILI++ G +G+ +GA+Q + M G+ DVVAYT IKV S+
Sbjct: 471 DKRSWCILINSYGCNGDKQGAVQAFQRMGRSGIIADVVAYTAIIKVRFESR 521
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 155/379 (40%), Gaps = 50/379 (13%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ ++ + ++AC NT LA L +L + + + I++ F D
Sbjct: 143 VVKNLVKPTLCMEACARMHNTALA---------LRYACLLPDILQSCNMIMQKFRDQGDL 193
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q +V + + S GV P+ ++ LI+AC G E+A +FE +L+AG N CN +
Sbjct: 194 QSVFQVFQALESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVCNSM 253
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A A RL+R S G D T I + ++ P +
Sbjct: 254 MNA--HAGNIQHVLRLYRQMQGS------GIAADVTTYNIVFKACR----LSKNP-VLAL 300
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYY---RVKALMNEMRTVGLSPNHISWTILID 556
Y + K +Y L++ + RV + ++M + G+ PN ++WT L+
Sbjct: 301 RLYEELKAK-EIKMNVLSYGTLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVG 359
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK------ 610
AC VE LQ+ + M + G +P+ Y + CV + +A LF E K
Sbjct: 360 ACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRIL 419
Query: 611 ------------HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++P+ V Y T++RA + +Q AV Q+M +G + +
Sbjct: 420 AGIEVQDESAIFSEWVRPDSVAYNTMMRACDKLP-----KQAEAVMQEMVSSGLRPDKRS 474
Query: 659 LKELIEEW-CEGVIQDKNQ 676
LI + C G Q Q
Sbjct: 475 WCILINSYGCNGDKQGAVQ 493
>gi|224102265|ref|XP_002334200.1| predicted protein [Populus trichocarpa]
gi|222870081|gb|EEF07212.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 187/273 (68%), Gaps = 5/273 (1%)
Query: 49 IPTVHSSQTALLSTV----RRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNV 104
IP VHS LLST+ + SS DY+A++ASKLA+DGRL++F MI ESV+ S
Sbjct: 45 IPAVHSRSPPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEP 104
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
S F + LS+ VA GI K++++G +DCVV LKK ELGV+ L+ DG LLK EC R
Sbjct: 105 SSFVAALSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKECIR 164
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP-RADIL 223
+++ G+VE V +ME L F KEL + I+++CV+K + +A+RYA I P IL
Sbjct: 165 IVNCGDVEQVVYIMETLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRIL 224
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN + EFG+K L SAL AYD +K LS PNMY+ RTIIDVCG+CGDYMKSR IYEDL
Sbjct: 225 FCNIISEFGRKGHLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLI 284
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
++ V N+YVFNSLMNVNAHDL + V+KNMQ
Sbjct: 285 NRKVIPNVYVFNSLMNVNAHDLGYPFRVFKNMQ 317
>gi|168063169|ref|XP_001783546.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664933|gb|EDQ51635.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 198/341 (58%), Gaps = 25/341 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+P++Y R +ID CG C + K+ ++E + N++V+NSLMNV+ DL Y
Sbjct: 7 APDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMNVSVGDLDEVQRYY 66
Query: 313 KNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++MQ+ G+ ++AS+NILLKA G LA ++Y ++ G L LDV +Y+ ++
Sbjct: 67 QHMQQGAGITGNLASFNILLKAYAACGRADLAADLYFRIQQ---TGELNLDVVSYNAVIN 123
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
VF AK W+ AL+VK D++ AGVTPN +TW+S+I ACA AGLVE+ F+EML AGC P
Sbjct: 124 VFGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEACATAGLVERVFQEFDEMLSAGCCP 183
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N C N LLQACV A Q +RAF+LF+ W T +I H +
Sbjct: 184 NVDCYNALLQACVMAGQNERAFQLFQEWK--------------QTGQI----HIFPRPSP 225
Query: 492 NTPNFVPNSHYSSFDKRFS-FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
+ ++ ++ S R S KP TYN +MKAC R+++LM EM+ L P+ S
Sbjct: 226 SWNGYIDEENWDSL--RLSRCKPNLLTYNWMMKACGAAPERIRSLMLEMQAFNLIPDVTS 283
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
W+IL+ A G +G++EG + K MR PDVVAYTT IK
Sbjct: 284 WSILLGAYGSNGDLEGCMDTFKEMRRARFKPDVVAYTTLIK 324
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 22/229 (9%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M GV P+ T+ +LI++C +A +FE ML+ G +PN N L+ V
Sbjct: 1 MREFGVAPDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMN--VSVGD 58
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D R ++ + G GN N+ K + + Y +
Sbjct: 59 LDEVQRYYQ-------HMQQGAGITGNLASF-NILLKAYAACGRAD--LAADLYFRIQQT 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRT------VGLSPNHISWTILIDACGGSG 562
+YN ++ + R K +R G++PN ++WT +I+AC +G
Sbjct: 109 GELNLDVVSYNAVINV----FGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEACATAG 164
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
VE Q M G P+V Y ++ CV + + ++AF LF+E K
Sbjct: 165 LVERVFQEFDEMLSAGCCPNVDCYNALLQACVMAGQNERAFQLFQEWKQ 213
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGAL 568
FKP YN LM D V+ M+ G++ N S+ IL+ A G + A
Sbjct: 40 GFKPNVFVYNSLMNVSVGDLDEVQRYYQHMQQGAGITGNLASFNILLKAYAACGRADLAA 99
Query: 569 QI-LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +I + ++ DVV+Y I V R+K ++A + ++ + PN+VT+ +++ A
Sbjct: 100 DLYFRIQQTGELNLDVVSYNAVINVFGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEA 159
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + V Q + +M AG
Sbjct: 160 CATAGLVERVFQ---EFDEMLSAG 180
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR G++P+ ++ LID+CG A + + M +DG P+V Y + + V V
Sbjct: 1 MREFGVAPDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMNVSVGD-- 58
Query: 599 LKQAFSLFEEMKH-YQIQPNLVTYITLLRARSRYG 632
L + ++ M+ I NL ++ LL+A + G
Sbjct: 59 LDEVQRYYQHMQQGAGITGNLASFNILLKAYAACG 93
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 191/411 (46%), Gaps = 59/411 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKL 318
++I CG + ++ + E +R+Q V+ N+ +NS ++ A ++ L++ + M +
Sbjct: 292 SVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTV 351
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV-------------------- 358
G++ + SYN AC + G V A E+ +K + A+G+
Sbjct: 352 GLVPTVISYNSATAACAVNGRWVEALEL---LKEMPAQGIAPNTISYNSALDACAKGGQW 408
Query: 359 ---LKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+KL D+ ++++ + + W+ A+++ +M +AG+TPN IT++S
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSA 468
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I AC + ++AM LF EM G PN N ++ AC + Q++ A +L +
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG--MPAR 526
Query: 465 QVALGE-DYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
VA Y+ + E + Q + P P KP +YN
Sbjct: 527 GVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGP-------------KPDIISYNSA 573
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ AC + L+ +M TVGL+PN +S+ I ACG + A++ILK M+ G
Sbjct: 574 VTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGA 633
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+P+++ Y+ AI C + R K+A L +++ + P+ TY+T++ A R
Sbjct: 634 TPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 193/432 (44%), Gaps = 44/432 (10%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYN 328
D+ + A ++ + +L+ +N + N + + + M GV D+ +YN
Sbjct: 90 DWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYN 149
Query: 329 ILLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ AC G A ++ + V E + DV TY++ + ++ W+ A+ + E
Sbjct: 150 SAIAACSKGGRWKEAMDLLTQMVAPTEG---ITPDVVTYNSAIAACSNGGRWKEAMDLLE 206
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M++ GV PN IT++S I ACA E+AM L EE+++ G P+++ N ++ AC +
Sbjct: 207 QMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGG 266
Query: 448 QFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
++ A L S++ G + D + M Q ++ PN
Sbjct: 267 RWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMR---TQGVS--PN 321
Query: 496 FVP-NSHYSSFDKRFSFK---------------PTTTTYNILMKACCTDYYRVKAL--MN 537
+ NS + K +K PT +YN AC + V+AL +
Sbjct: 322 VISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLK 381
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G++PN IS+ +DAC G E A+++L+ M G PD++++ +AI C R +
Sbjct: 382 EMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQ 441
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ + A L EM + PN++TY + + A R Q+ + ++++M G N
Sbjct: 442 QWETAVELLREMPTAGLTPNVITYNSAIEACGRSARW---QEAMGLFREMPTRGLSPNVV 498
Query: 658 YLKELIEEWCEG 669
+I+ +G
Sbjct: 499 TYNSMIDACAKG 510
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 136/591 (23%), Positives = 246/591 (41%), Gaps = 103/591 (17%)
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE-----FRLP 187
+GVL + E + P G+ + G+ + V L +L E +R
Sbjct: 46 LGVLSRRGEGSLEPSTRSRGAASR-----------GGKPKSLVKLKSILLEAKGRDWRTA 94
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF---GKKRDLVSALRAY 244
+ LDE F+I ++ N+AI AC R +RE G D+V+ A
Sbjct: 95 LAALDE-FKISGGSLDTTSYNIAI-AACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAI 152
Query: 245 DASKKHLS------------------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
A K +P++ + I C G + ++ + E + +Q
Sbjct: 153 AACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQG 212
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +NS + A ++ +++ + + + G +YN ++ AC G + A
Sbjct: 213 VPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAM 272
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ G++ + + DV +YS+++ + W+ A+ + E M + GV+PN I+++S
Sbjct: 273 DLLGQMLTND----IPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSA 328
Query: 405 INACANA----------------GLVE-------------------QAMHLFEEMLQAGC 429
I+ACA GLV +A+ L +EM G
Sbjct: 329 IDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGI 388
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKD 486
PN+ N L AC + Q+++A +L R +G D D N+ + +
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRG------MSTVGSDPDIISFNSAIDACGRGQQ 442
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
++ +P + P TYN ++AC + L EM T GL
Sbjct: 443 WETAVELLREMPTA---------GLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGL 493
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN +++ +IDAC E A+Q+L M G++PDV++Y +AI+ C + ++ + A
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L + M +P++++Y + + A ++ G E L + +DM G N
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRWREA---LGLLKDMATVGLTPN 601
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+ ++ID C + + + + ++ V ++ +NS + + L+
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M G D+ SYN + AC +G +E G +K + G L + +Y +
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRW---REALGLLKDMATVG-LTPNTVSYGAAI 609
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ W +A+++ ++M + G TPN IT+S+ I+ACA G ++A+ L ++ + G
Sbjct: 610 HACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLT 669
Query: 431 PNSQ 434
P++Q
Sbjct: 670 PDAQ 673
>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 49/420 (11%)
Query: 236 DLVSALRAYDASKK------HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
D ALRA D K+ H S M +I CG G + ++ + ++ + ++
Sbjct: 9 DRRKALRALDGMKRLPRELLHQKSHCM-----VITACGRGGQWEQAVKLLREMPTAGLSP 63
Query: 290 NIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N++ A K L + K M +G+ D+ +Y+ + AC A +
Sbjct: 64 NVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALAL- 122
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI-------- 399
+K + A G L DV TYS+ V A + W+ AL + ++M + G+TPN I
Sbjct: 123 --LKEMTAVG-LTPDVITYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSM 179
Query: 400 ----TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T++S I+ C+ G ++ + L +EM G PN N + AC + Q+ A L
Sbjct: 180 SPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALAL 239
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF---- 511
+ T V L D IS D S T P + + +
Sbjct: 240 LKE----MTAVGL------TPDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEM 289
Query: 512 -----KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +Y+ + D ++V AL+ +M VGL+P+ I+ IDAC G E
Sbjct: 290 TVVGLTPNVVSYSAAIACAKGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWE 349
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL +LK M G++P VV Y +AI C R R K+ L EEM+ + P+++TY L+
Sbjct: 350 TALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHALM 409
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 64/286 (22%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A+K+ +M +AG++PN IT++++ ACA + A+ L +EM G P+ +
Sbjct: 46 WEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSS 105
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ AC + Q+ A L K+ ++ TP+ +
Sbjct: 106 AVDACAKGEQWKGALALL----------------------------KEMTAVGLTPDVI- 136
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL-- 554
TY+ + AC + AL+ EM VGL+PN IS+ L
Sbjct: 137 ------------------TYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPS 178
Query: 555 ----------IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
ID C G + L +LK M G++P+V+ Y +AI C + + K+A +
Sbjct: 179 MSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALA 238
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L +EM + P++++Y + + A S+ G+ ++ C + WK
Sbjct: 239 LLKEMTAVGLTPDVISYSSAIDACSK-GATAQLFPC--AKGEQWKG 281
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ EM T GLSPN I++ + AC +GAL +LK M G++PDV+ Y++A+ C
Sbjct: 52 LLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACA 111
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ ++ K A +L +EM + P+++TY + + A ++ + ++ LA+ ++M G
Sbjct: 112 KGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKG---EQWKEALALLKEMTAVGLTP 168
Query: 655 NDTYLKEL--IEEWC 667
N L + WC
Sbjct: 169 NVISYNGLPSMSPWC 183
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV------------ 300
+PN+ + ID C G + ++ A+ +++ + +T ++ ++S ++
Sbjct: 214 TPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPC 273
Query: 301 -NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
K L + K M +G+ ++ SY+ + AC +A + +K + A G L
Sbjct: 274 AKGEQWKGALALLKEMTVVGLTPNVVSYSAAI-ACAKGDQWKVALAL---LKKMTAVG-L 328
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV T ++ + + W+ AL + ++M + G+TP+ + ++S I+ACA G ++ +
Sbjct: 329 TPDVITCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVD 388
Query: 420 LFEEMLQAGCEPNSQCCNILLQACV 444
L EEM + G P+ + L+ CV
Sbjct: 389 LLEEMRELGVVPDVITYHALMVTCV 413
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I ACG G E A+++L+ M G+SP+V+ Y C + ++ K A +L +EM
Sbjct: 35 MVITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAV 94
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ P+++TY + + A ++ + + LA+ ++M
Sbjct: 95 GLTPDVITYSSAVDACAKG---EQWKGALALLKEM 126
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR-AIYEDLRSQNVTL 289
G D++S A DA K ++ ++ C G+ K A+ +++ +T
Sbjct: 246 VGLTPDVISYSSAIDACSKG-ATAQLFPCAK--------GEQWKGALALLKEMTVVGLTP 296
Query: 290 NIYVFNSLMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
N+ +++ + D K L + K M +G+ D+ + N + AC G A +
Sbjct: 297 NVVSYSAAIACAKGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWETALAL-- 354
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K + A G L V Y++ + A W+ + + E+M GV P+ IT+ +L+ C
Sbjct: 355 -LKEMAAVG-LTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHALMVTC 412
Query: 409 AN 410
N
Sbjct: 413 VN 414
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 191/416 (45%), Gaps = 55/416 (13%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ ++ V LR ++ +P++ I CG G + S + +++ + V N
Sbjct: 299 GRWKEAVEVLRQMESQG---VTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNT 355
Query: 292 YVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FNS + ++ +E+ + + LG+ D S+N + AC +G A E+
Sbjct: 356 IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALEL--- 412
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K + AK LK D +Y++ ++ W+MAL+++ M + G+TPN I+ + I AC
Sbjct: 413 LKEMPAK-RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G ++ + L +M G PN N ++ C + Q+++A
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL---------------- 515
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFK---------------P 513
D ++ M+ + TP+ + NS ++ KR +K P
Sbjct: 516 -------DLLAKMKE-----LAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y + A + + R L+ +M T GL+PN I++ +I ACG G E AL +L
Sbjct: 564 DVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLL 623
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K ++E ++PD+++Y AI C + R ++A L EM + P++++Y + +RA
Sbjct: 624 KELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRA 679
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 20/389 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN++ + I+ CG + + ++ ++ + V + +NS + ++ +
Sbjct: 177 SPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIG 236
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M +G+ D +YN ++ C G +E + + AKG L + +Y+ +
Sbjct: 237 LLREMPSVGLTPDAITYNSVITGC---GKEGQWKEALSVLTEMSAKG-LTPETISYNMAI 292
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W+ A++V M S GVTP+ I++ + I AC G E ++ L +EM G
Sbjct: 293 RACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVA 352
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ N + AC + Q+++A L R T + L D I+ +
Sbjct: 353 PNTIHFNSAIVACGKGGQWEKAVELLR----EVTALGLTPDATSFNSAIA--------AC 400
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
T + + KP +YN ++AC + L +M T GL+PN
Sbjct: 401 TKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS I I ACG G + L++L+ M G++P+V+ Y +AIK C + + ++A L +
Sbjct: 461 ISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAK 520
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEV 637
MK + P+ +TY + + A S+ G E
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEA 549
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 167/391 (42%), Gaps = 41/391 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I CG G + K+ + ++ + +T + FNS + + K LE
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M + D SYN ++AC G +A E+ + + KG L +V + + +
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELR---RQMPTKG-LTPNVISSNIAI 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + WQ L++ M + G+TPN IT++S I C G E+A+ L +M +
Sbjct: 468 RACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMT 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
P+S N + AC + ++ A L R S+T + ++ +
Sbjct: 528 PDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVEL 587
Query: 479 ISNMEHKDKQSITNTPNFVP-----------NSHYSSFD-----KRFSFKPTTTTYNILM 522
+ M K TPN + + D K + P +YN+ +
Sbjct: 588 LRQMPTKGL-----TPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAI 642
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC +AL + EM GL+P+ IS+T I AC G E AL +L +M G+S
Sbjct: 643 SACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVS 702
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
P +Y+ AI+ C + R ++A L EM
Sbjct: 703 PTATSYSLAIEACGKGGRREEAVCLVREMAQ 733
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 177/407 (43%), Gaps = 35/407 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM-QKLGVMADMAS 326
G + ++ I ++++ V + + + + ++ LE+ + + ++ GV ++
Sbjct: 124 GKWREALGILDEMKEGGVVC-AHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++AC +A + E+ E + D +Y++ +K W+ + +
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADRE----VVPDEISYNSAIKACGRGGQWERVIGLL 238
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+M S G+TP+ IT++S+I C G ++A+ + EM G P + N+ ++AC +
Sbjct: 239 REMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRS 298
Query: 447 CQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITN 492
++ A + R S+ + G ++ + D + M + +I
Sbjct: 299 GRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHF 358
Query: 493 TPNFVPNSHYSSFDK---------RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMR 540
V ++K P T++N + A CT R K L+ EM
Sbjct: 359 NSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAI-AACTKSGRWKEALELLKEMP 417
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
L P+ IS+ I+ACG G E AL++ + M G++P+V++ AI+ C R +
Sbjct: 418 AKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQ 477
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ L +M + PN++TY + ++ + G + LA +++
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKEL 524
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 194/467 (41%), Gaps = 93/467 (19%)
Query: 118 SGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGL 177
S IV + G+ + V +L+++ LG+ P D + F C + SG +
Sbjct: 360 SAIVACGKGGQWEKAVELLREVTALGLTP----DATSFNSAIAACTK---SGR---WKEA 409
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+E+L+E +P K L KPD AI Y + I C G + ++
Sbjct: 410 LELLKE--MPAKRL------------KPD---AISY-----NSAIEACGK----GGQWEM 443
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
LR +K +PN+ I CG G + + + + +Q +T N+ +NS
Sbjct: 444 ALELRRQMPTKGL--TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501
Query: 298 MNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ ++ L++ M++L + D +YN + AC G +E ++ +
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW---KEAVALLREMPG 558
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G L DV +Y+ + + W+ A+++ M + G+TPN IT++S+I AC G E
Sbjct: 559 QG-LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWE 617
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A+ L +E+ + P+ N+ + AC + +++ A L R
Sbjct: 618 KALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE----------------- 660
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
+P P +Y ++AC + + +
Sbjct: 661 ---------------------MPAE---------GLTPDVISYTSAIRACNAEGEWEKAL 690
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
L+N M G+SP S+++ I+ACG G E A+ +++ M + G+S
Sbjct: 691 GLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLS 737
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 52/308 (16%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-KEDMLSAGVT 395
A T +E G + ++ GV+ +Y+T + W+ AL++ +E GV+
Sbjct: 120 AATTGKWREALGILDEMKEGGVVC--AHSYTTAITTCGRQGQWEKALELLREIPEQEGVS 177
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN ++S I AC + E A+ L EM P+ N ++AC Q++R L
Sbjct: 178 PNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGL 237
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R + S+ TP+ +
Sbjct: 238 LR----------------------------EMPSVGLTPDAI------------------ 251
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN ++ C + +AL + EM GL+P IS+ + I ACG SG + A+++L+
Sbjct: 252 -TYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQ 310
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G++PDV++Y AIK C + + + L +EM + PN + + + + A + G
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370
Query: 634 LHEVQQCL 641
+ + L
Sbjct: 371 WEKAVELL 378
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 521 LMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMREDG 578
L +A T +R +++EM+ G+ H S+T I CG G E AL++L+ I ++G
Sbjct: 117 LREAATTGKWREALGILDEMKEGGVVCAH-SYTTAITTCGRQGQWEKALELLREIPEQEG 175
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+SP+V Y +AI+ C + + A SL EM ++ P+ ++Y + ++A R G V
Sbjct: 176 VSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 59/405 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
++RD AL DA L ++ I CG + ++ + +++++ + ++
Sbjct: 206 RRRDWTRALTVLDAP---LIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLV 262
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN+ M+ A LE++ ++ G ++ SYN + AC AG A E+ E+
Sbjct: 263 SFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREM 322
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACA 409
+ L ++ D +Y+T++ FA W+ AL++ +M A GV P+ I++++ ++ CA
Sbjct: 323 QGLS----VRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCA 378
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AG E+A L E L G +P+ N ++ AC A ++ +A LF +
Sbjct: 379 KAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLF----------GMM 428
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CT 527
E+ DR+S +N M AC
Sbjct: 429 EEVGVAPDRVS-------------------------------------FNTAMHACNRAL 451
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ ++ EM ++PN S+TI +DACG +G E AL++++ M G+ +V YT
Sbjct: 452 KWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYT 511
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A+ C R + + L EEM ++PN+V+Y + A +R G
Sbjct: 512 AAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVG 556
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 169/417 (40%), Gaps = 86/417 (20%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ F + GK AL + + H +PN+ T I CG G
Sbjct: 258 RPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAG------- 310
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
M AH E+ + MQ L V D SYN ++ A
Sbjct: 311 --------------------MVDRAH------ELLREMQGLSVRPDSVSYNTVMAAFAKK 344
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A E+ E+K EA GV D+ +Y+T + V A A W+ A ++ + L G+ P+
Sbjct: 345 NQWKAALELLAEMK--EAPGV-DPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPD 401
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++++++++AC AG QA+ LF M + G P+ N + AC A ++ A ++ R
Sbjct: 402 VVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILR 461
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
ME + S P +
Sbjct: 462 -----------------------EMEAR------------------------SIAPNVKS 474
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y I + AC ++ R LM EM G+ N ++T +DAC G V+ L +L+ M
Sbjct: 475 YTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMD 534
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G+ P+VV+YT A+ R + +A ++ E+M ++ + V+Y T L R G
Sbjct: 535 GKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +T+ I ACG + AL +L+ M+ G+ PD+V++ TA+ ++ + A LF E
Sbjct: 227 VGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTE 286
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + PNLV+Y T + A R G + + L Q +
Sbjct: 287 IEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL 325
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 220/554 (39%), Gaps = 118/554 (21%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY---------MK 274
+C + G+ A+R ++P++ +ID C G + M
Sbjct: 36 YCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMP 95
Query: 275 SRAIYEDLRS--------------------------QNVTLNIYVFNSLMN--VNAHDLK 306
++ I D RS ++VT N+ ++NS +N A +
Sbjct: 96 TKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWE 155
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + K M +G+ D+ SY+ + AC G A E++ + + GV DV TY
Sbjct: 156 IAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELF---EDMRTSGVAP-DVITY 211
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A+ W+ A+ + + + G+TPN I++SS+I ACA G + A+ L EM
Sbjct: 212 GSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKA 271
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNME 483
PN N + AC + ++ A L R V L D Y D S +
Sbjct: 272 MRLAPNIITYNAAIDACAKGGRWKEAIDLLR----EMPTVGLPPDVVSYSSVIDACSKGD 327
Query: 484 H--------KDKQSITNTPNFVP-NSHYSSFDKRFSFK---------PTTTT------YN 519
++ ++ +PN + NS + K +K PT YN
Sbjct: 328 RWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYN 387
Query: 520 ILMKACCTD-------------------------------------YYRVKALMNEMRTV 542
+ AC + + K L+ EM TV
Sbjct: 388 SAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATV 447
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL+PN + + IDACG E A+ +L+ M G+SPDV +Y++AI C + + K+A
Sbjct: 448 GLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEA 507
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ +EM + P+L+ Y + + A S+ G + +A+ +M AG N
Sbjct: 508 LAVLKEMSAAGLAPDLICYNSAIDACSKGGRW---KMAVALLGEMRAAGLTPNIISYSSA 564
Query: 663 IE------EWCEGV 670
I+ +W EG+
Sbjct: 565 IDACVRGGQWKEGI 578
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 198/438 (45%), Gaps = 33/438 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + + G+ AL ++ + +P++ + I C G + ++ ++
Sbjct: 174 ISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRK 233
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +T N+ ++S++ A + K L++ + M+ + + ++ +YN + AC G
Sbjct: 234 IPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGR 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+ + L DV +YS+++ + W+ A+ + +M + G++PN I
Sbjct: 294 WKEAIDLLREMPTVG----LPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAI 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++S I+ACA G ++A L EM AG N + AC + Q+ A L R
Sbjct: 350 SYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREM 409
Query: 460 TLSKTQVALGEDYDGNTDRIS--NMEHKDKQSITN--TPNFVPNS--HYSSFD------- 506
+ Y D N+ K K+ + T PN + S+ D
Sbjct: 410 PTVGLHTTV-FSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQ 468
Query: 507 -----------KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTI 553
P +Y+ + AC + A++ EM GL+P+ I +
Sbjct: 469 WEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNS 528
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
IDAC G + A+ +L MR G++P++++Y++AI CVR + K+ +L EEM+
Sbjct: 529 AIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSG 588
Query: 614 IQPNLVTYITLLRARSRY 631
+ P+++TY L+ ++Y
Sbjct: 589 VVPDVITYHALMVTCAKY 606
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 49/274 (17%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+D +Y + W+ A+++ +M + G P+ +S++I+ACA G + A+
Sbjct: 31 IDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFF 90
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EM G P+++ + AC ++ A L R
Sbjct: 91 LMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLR----------------------- 127
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNE 538
M +D TPN + YN + +C + +L+ E
Sbjct: 128 EMLARDV-----TPNVI-------------------IYNSAINSCAKAGQWEIAVSLVKE 163
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M TVGL+P+ IS++ I ACG G E AL++ + MR G++PDV+ Y +AI C R
Sbjct: 164 MATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGR 223
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K+A SL ++ + PN+++Y +++ A ++ G
Sbjct: 224 WKEAVSLLRKIPTVGLTPNVISYSSVITACAKEG 257
>gi|224102261|ref|XP_002334199.1| predicted protein [Populus trichocarpa]
gi|222870080|gb|EEF07211.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 648 WKA--GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQ 705
W+ YK+ND YLK+LIEEWCEGVIQD NQ QG C+RT+ RP+SLLLEKVA HLQ
Sbjct: 8 WRTLCSYKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCKRTDLGRPRSLLLEKVAAHLQ 67
Query: 706 KSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
+ +ENLAIDL+GLTKVEARI+VLAVLRM+KENY+LG
Sbjct: 68 NNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLG 104
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 46/418 (11%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314
+++ T+I +C CG Y ++ A+ E++ ++NV+ NIY FN+L+ V + L +L K
Sbjct: 189 DVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKR 248
Query: 315 MQKL-------------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L G+ D+ +YN LL G +E Y + +E + V+
Sbjct: 249 QNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKW---KESYDILFEIEDQHVIT- 304
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV TYST++ FA + + +A+++ E M+ V PN IT++SLI AC A QA F
Sbjct: 305 DVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFF 364
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVAL------G 469
++M G PN + ++ +C + AF LF + T AL
Sbjct: 365 DDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHS 424
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------YSSFD--KRFSFKPTTT 516
+ ++ D + M+ Q N + H + D KR KP
Sbjct: 425 KQWEQAMDVLEWMQDAGIQ--LNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVI 482
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ L+ AC D R ++ M+ ++PN +++ +L+ C GN A Q++ ++
Sbjct: 483 MFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLL 542
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+E G ++ + T IK CVRS ++AF ++ +M+ +I+P+L T+ L A G
Sbjct: 543 QEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGG 600
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 179/394 (45%), Gaps = 37/394 (9%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I Y + +YE + + V N+ +NSL+ + A++ + +MQ
Sbjct: 311 TLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQ 370
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +Y+ ++ +C N V A +++ E+ E + D T+S ++ V +K
Sbjct: 371 GISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKE----IPPDPMTFSALLSVCQHSKQ 426
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A+ V E M AG+ N +S++++ C AG ++ A + +E + G +PN
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTA 486
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ AC A DRAFR+ + ED+ N+ + T V
Sbjct: 487 LIHACKVARDLDRAFRVLE---------LMKEDHVTPNLVTFNV-------LLGTCEVVG 530
Query: 499 NS----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
NS + + F+ T+N L+K C + KA + ++M+ + P+ ++
Sbjct: 531 NSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFN 590
Query: 553 ILIDACGGSGNVEGALQIL--------KIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L A G+ A+ ++ KI+ R G +P V AY + I CV+S ++AF
Sbjct: 591 ALSMAAEEGGDWRRAIDVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAF 650
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+++ MK ++ N+VTY ++ S L EV
Sbjct: 651 DVYKGMKTSGVRANIVTYNLIISILSGQRKLSEV 684
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASY 327
GD+ ++ AI + V +I +N++++ H D++ + K M++ V D+ S+
Sbjct: 100 GDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVFVMLKRMRE-KVSPDIVSF 158
Query: 328 NILLKAC---CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
N L AC C + V E+ E + ++ DVFT+ST++ + + A
Sbjct: 159 NTALAACQRQCDWESGVAILEMMSEDQ-------IERDVFTFSTLISLCDRCGKYDEAFA 211
Query: 385 VKEDMLSAGVTPNTITWSSLINACANA-----------GLVEQAMHLFEEMLQAGCEPNS 433
+KE+M + V+PN T+++LI C N+ + A LF E AG P+
Sbjct: 212 LKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDI 271
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N LL +E ++ ++ + ED TD I+ T
Sbjct: 272 VTYNSLLGVYMEMGKWKESYDILFEI----------EDQHVITDVITYS--------TLI 313
Query: 494 PNFVPNSHYS----SFDKRFSFK--PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
F YS ++K + P TYN L+ AC ++ + A ++M+ G+S
Sbjct: 314 STFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGIS 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++++ +I +C N A + M + PD + ++ + VC SK+ +QA +
Sbjct: 374 PNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDV 433
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E M+ IQ N+ Y ++ + G L + + L
Sbjct: 434 LEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRIL 469
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 175/454 (38%), Gaps = 99/454 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + F K R A+ Y+ + PN+ ++I C ++ ++ A ++D
Sbjct: 307 ITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDD 366
Query: 282 LRSQNVTLNI-----------------------------------YVFNSLMNVNAHDLK 306
+++Q ++ N+ F++L++V H +
Sbjct: 367 MQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQ 426
Query: 307 F--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++V + MQ G+ ++ Y+ ++ C AG A I E K + +K +V
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECK----RDGIKPNVI 482
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ ++ A+ A +V E M VTPN +T++ L+ C G A + +
Sbjct: 483 MFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLL 542
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ G N Q N L++ CV + ++ +AF ++ L +
Sbjct: 543 QEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQR--------------------- 581
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT- 541
+P+ +T+N L A D+ R +M +MR
Sbjct: 582 --------------------------IRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIK 615
Query: 542 --------VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
G +P+ ++ LI AC S N + A + K M+ G+ ++V Y I +
Sbjct: 616 TEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISIL 675
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L + + EMK ++ P+ T ++ A
Sbjct: 676 SGQRKLSEVLKVINEMKQEEVTPDSETIALMIDA 709
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 24/262 (9%)
Query: 191 LDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
LD+ FRI+ C KP+V I+F + RDL A R +
Sbjct: 462 LDDAFRILDECKRDGIKPNV--------------IMFTALIHACKVARDLDRAFRVLELM 507
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
K+ +PN+ ++ C + G+ + + L+ N+ FN+L+ V +H+
Sbjct: 508 KEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEW 567
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL---- 361
+ EVY MQ + ++++N L A G+ A ++ +++ K ++++
Sbjct: 568 QKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIKTEKILIRMAGHT 627
Query: 362 -DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V Y++++ + +Q A V + M ++GV N +T++ +I+ + + + + +
Sbjct: 628 PSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISILSGQRKLSEVLKV 687
Query: 421 FEEMLQAGCEPNSQCCNILLQA 442
EM Q P+S+ +++ A
Sbjct: 688 INEMKQEEVTPDSETIALMIDA 709
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 125/319 (39%), Gaps = 47/319 (14%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+KL ++ ++ W+ A+ + M GV P+ ++++++++A ++ ++
Sbjct: 82 IKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVF 141
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ + M + P+ N L AC C ++ + +S+ Q+
Sbjct: 142 VMLKRM-REKVSPDIVSFNTALAACQRQCDWESGVAILE--MMSEDQI------------ 186
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKACCTDY 529
++ T + +D+ F+ K P T+N L+ C
Sbjct: 187 -------ERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSL 239
Query: 530 YR-------------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ L E + GL P+ +++ L+ G + + IL + +
Sbjct: 240 ATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIED 299
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ DV+ Y+T I ++++ A ++E+M Q+ PN++TY +L+ A R +
Sbjct: 300 QHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNF-- 357
Query: 637 VQQCLAVYQDMWKAGYKAN 655
Q A + DM G N
Sbjct: 358 -SQAFAFFDDMQAQGISPN 375
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 48/540 (8%)
Query: 97 VVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFK 156
V+ S G + ++L EMVA G + +R + ++ + N+ G A FD
Sbjct: 4 VLASWGILDPLETLLK-EMVAEG--RPLRPNTLVKLITAYGRGNKSGDA----FD----- 51
Query: 157 LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACI 216
L N+ + S V F L+++L EF +L K ++ C
Sbjct: 52 -LFNQAESFACSPTVHAFTKLIDILVN--------SGEFERAELVYKK-----LVQKGCQ 97
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+ R + +R FG+ L SA+ + K S P+ Y +++ G G ++R
Sbjct: 98 LDR--FAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ + + +T NI +N LM+ L L ++ M++ G + +YNILL A
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG A++++ H D +TYST+V + + A KV +M+ GV
Sbjct: 216 CSAGRVGAARKLF----HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + ++SL+ A AG +++ L +EM + G P++ N ++ A +A + D A
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F S + L Y+ D + Q+ V F P
Sbjct: 332 VFARMVESGCKPDL-ISYNILIDSYARFGDA-AQARQMLEEMVEAG----------FIPE 379
Query: 515 TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TYN L+ TD A++ EM T G P+ +++ L+D G G + A ++ +
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ G+ PD ++Y I RL +A LF++MK + Y L+RA R G
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 199/440 (45%), Gaps = 37/440 (8%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G+ A ++ ++ SP ++ +ID+ G++ ++ +Y+ L +
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
L+ + +N L+ + L +E+++ M+ G D +Y L+ A AG A+
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + LE +G L ++ TY+ ++ F MAL + +M G P+ +T++ L
Sbjct: 156 SFFDAM--LE-RG-LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
++A +AG V A LF +M GC P+S + L+ ++ + + A ++FR
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 465 QVALGEDYD---------GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
V L +Y+ GN DR+ + + + F P++ FSF
Sbjct: 272 AVDL-VNYNSLLATLAKAGNMDRVWKLMKE-----MSRKGFHPDA--------FSF---N 314
Query: 516 TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
T + L KA D R + M G P+ IS+ ILID+ G+ A Q+L+ M
Sbjct: 315 TIMDALGKANKPDAAR--EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G P+ Y + I ++ +AF++ EEM+ +P++VTY L+ + G
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG--- 429
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
E Q+ ++Q M G + +
Sbjct: 430 ENQRAARLFQQMKDKGVEPD 449
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 180/404 (44%), Gaps = 56/404 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL ++ ++K N+Y ++ G G ++ +++ ++ N+ +N++++
Sbjct: 218 ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 277
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DLK L++++ MQK GV D ++N L+ C +Q ++ E ++ +
Sbjct: 278 ACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAE---MQRR 334
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D+FTY+T++ ++A + M ++PN +T+S++I+ G E+
Sbjct: 335 GI-EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEE 393
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ +M ++G P+ N L+ + +FD A +
Sbjct: 394 AIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACK------------------- 434
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ME R K TYN L+ A Y
Sbjct: 435 ----DME------------------------RVGLKADVVTYNALIDAYGKQGKYKDAAG 466
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M+ GL PN ++++ LIDA +G + A I + G+ PDVV Y++ I C
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A L +EM IQPN+VTY +L+ A R G + V+
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVE 570
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 152/321 (47%), Gaps = 29/321 (9%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHL 420
+V+ YS +V + + + ALKV + M AG PN IT++++I+AC G+ +++A+ +
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDI 292
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTD 477
FEEM + G EP+ N L+ C ++ + R+F + + +D Y+ D
Sbjct: 293 FEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVF----AEMQRRGIEQDIFTYNTLID 348
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVK 533
+ + + + + N P TY+ ++ K C +
Sbjct: 349 AVCKGGQMELAASIMSSMRLKN-----------ISPNVVTYSTMIDGYGKLGC--FEEAI 395
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L ++M+ G+ P+ +S+ LID G + AL K M G+ DVV Y I
Sbjct: 396 GLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY 455
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + K A LF++MK + PN++TY L+ A S+ G +H Q +++ + +AG K
Sbjct: 456 GKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAG-MH--QDATSIFVEFKRAGLK 512
Query: 654 ANDTYLKELIEEWCE-GVIQD 673
+ LI+ C+ G+++D
Sbjct: 513 PDVVLYSSLIDSCCKCGLVED 533
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 52/404 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN+ T+ID G G + ++ +Y D++ V + +N+L+++ A +F L
Sbjct: 372 SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALT 431
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+M+++G+ AD+ +YN L+ A G A ++ ++K A+G++ +V TYS ++
Sbjct: 432 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMK---AEGLVP-NVLTYSALI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A Q A + + AG+ P+ + +SSLI++C GLVE A+ L +EM QAG +
Sbjct: 488 DAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ A G ++ N+E
Sbjct: 548 PNIVTYNSLIDAY------------------------------GRNGQVDNVEAAKGNMP 577
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
N N V + K + + + ++ A ++ +EM+ GL PN ++
Sbjct: 578 INVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAV--------SVFHEMQQFGLKPNVVT 629
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ +++AC +++ A +L+ MR V + + +R +A LF+E+
Sbjct: 630 FSAILNACSRCSSLQEASVLLEQMRF--FDSWVYGIAHGLLMGLREHVWVEAQRLFDEIA 687
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA------VYQDMW 648
Y L +G Q+ + V+++ W
Sbjct: 688 RMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAW 731
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+I+I G G VE AL + ++ G +V AY+ + RS R ++A +F+ MK
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
+PNL+TY T++ A + G ++++ L ++++M K G + + LI G +
Sbjct: 263 AGCKPNLITYNTIIDACGKGGV--DLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSL 320
Query: 672 QDKNQ 676
+ +Q
Sbjct: 321 WEDSQ 325
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 198/455 (43%), Gaps = 59/455 (12%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R +L CN + + K + + +D H P++Y +I G+ ++
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ + + N+ +N ++ A L +E+ ++M G++ D+ +Y+IL+ C
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ + A+ + E+ + LK + TY+ ++ F + A ++K++M++ G+
Sbjct: 297 MEKRSREAKLMLLEMIDVG----LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 352
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N I W++L+N AG +E+A+ + +EM++ G EP+SQ ++L++ RAF L
Sbjct: 353 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
K+ PT
Sbjct: 413 LDEM-----------------------------------------------KKRKLAPTV 425
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY++++ C + A++ EM GL PN + +T L+ A G VE + IL+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MRE G+ PDV Y + I ++KR+++A + EM +++PN TY + S+ G
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + + +M G N LIE C+
Sbjct: 546 MEIADR---YFNEMLSCGVLPNVGIYTALIEGHCK 577
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 190/448 (42%), Gaps = 40/448 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ +++ A D KK +P + II+ CG+ + AI ++ + N
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 461
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+ +LM +A + ++ + + + M++ G++ D+ YN L+ C A A+ E+
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LE + L+ + TY + ++ A ++A + +MLS GV PN +++LI
Sbjct: 522 --LERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLS 462
G V +A +F +L + Q ++L+ + AF +F +
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ G GN D+ S + ++ I P TYNIL+
Sbjct: 638 YNSLISGSCKQGNVDKASQL--LEEMCIK------------------GINPDIVTYNILI 677
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + R K L +++ GL+PN +++ ++D S N A Q+L+ M G+
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 737
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD Y + C + ++ ++A LF+EM + V++ TL+ + G L E
Sbjct: 738 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHL 796
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE 668
L ++M + + N LI+ C+
Sbjct: 797 L---EEMIEKQFIPNHVTYTSLIDHNCK 821
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 208/496 (41%), Gaps = 62/496 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F ++ D+ A R D N+ I T+++ G+C G K+ I
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN--GVCKAGKMEKALEIM 378
Query: 280 EDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + V + ++ L+ + ++ E+ M+K + + +Y++++ C
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438
Query: 338 GN---------------------------TVLAQEIYGE-----VKHLEAKGVLKLDVFT 365
GN T A+E E ++ + +G+L DVF
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP-DVFC 497
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ F AK + A +ML + PN T+ + I+ + AG +E A F EML
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G PN L++ + AF +FR + LS+ + +D + I +
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR-FILSRRVL---QDVQTYSVLIHGLSRN 613
Query: 486 DKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K + + F + P TYN L+ C KA L+ EM
Sbjct: 614 GKM----------HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 663
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++P+ +++ ILID +G +E A + + G++P+ V Y + +SK
Sbjct: 664 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 723
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AF L EEM + P+ Y +L + + ++ L ++Q+M + G+ A+
Sbjct: 724 AFQLLEEMLLRGVPPDAFIYNVILNFCCKE---EKFEKALDLFQEMLEKGF-ASTVSFNT 779
Query: 662 LIEEWCE-GVIQDKNQ 676
LIE +C+ G +Q+ N
Sbjct: 780 LIEGYCKSGKLQEANH 795
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 214/482 (44%), Gaps = 52/482 (10%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
F+ + K ++ A R ++ PN+ I +I+ G C G+ ++ +++ + S
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCKEGNVTEAFSVFRFILS 593
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ ++ L++ + + K ++ +Q+ G++ + +YN L+ C GN
Sbjct: 594 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 653
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ + KG+ D+ TY+ ++ A + A + +D+ G+TPN +T++
Sbjct: 654 ASQL---LEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++++ + A L EEML G P++ N++L C + +F++A LF+ L
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE-MLE 768
Query: 463 K---TQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPN--SHYSSFD--------- 506
K + V+ +G + ++ H ++ I F+PN ++ S D
Sbjct: 769 KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK--QFIPNHVTYTSLIDHNCKAGMMG 826
Query: 507 --KRFSFK-------PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
KR + PT TY L+ + V AL EM G+ P+ +++ ++I
Sbjct: 827 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA GNV A ++ + GM V AY I+ + + + L E+ +
Sbjct: 887 DAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
L T + R G++ E + V + M K G+ +N T L +L+ D N
Sbjct: 947 LGLPTCSVIARGFQIAGNMDEAAE---VLRSMVKFGWVSNTTSLGDLV---------DGN 994
Query: 676 QN 677
QN
Sbjct: 995 QN 996
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQ 569
P TYN+++ C +A L M GL P+ ++ ILI+ C + E L
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L+ M + G+ P+ + Y I +R ++QAF + +EM I+ NL+ + TLL
Sbjct: 308 LLE-MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVC 366
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G + ++ L + Q+M + G + + LIE C G
Sbjct: 367 KAGKM---EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 403
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 16/229 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMA 322
G C G ++ + E++ + N + SL+ N A + ++ MQ+ VM
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+Y LL GN E+ + + AKG+ + D TY ++ + A
Sbjct: 843 TAKTYTSLLHGYHNIGNM---SEVSALFEEMVAKGI-EPDKMTYYVMIDAYCREGNVMEA 898
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+K+++L G+ + + +LI A + + L E+ ++G C+++ +
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958
Query: 443 CVEACQFDRAFRLFRS-----WTLSKTQVALGEDYDGNTDRISNMEHKD 486
A D A + RS W + T +LG+ DGN + +N E D
Sbjct: 959 FQIAGNMDEAAEVLRSMVKFGWVSNTT--SLGDLVDGNQNG-ANSEDSD 1004
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 56/404 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL ++ ++K N+Y ++ G G ++ +++ ++ N+ +N++++
Sbjct: 219 ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 278
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DLK L+++ MQK GV D ++N L+ C G +Q ++ E ++ +
Sbjct: 279 ACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE---MQRR 335
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D+FT++T++ ++A + M ++PN +T+S++I+ G E+
Sbjct: 336 GI-EQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEE 394
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ +M ++G P+ N L+ + +FD A
Sbjct: 395 AISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL----------------------- 431
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ KD + R K TYN L+ A Y
Sbjct: 432 -----IACKDME-------------------RVGLKADVVTYNALIDAYGKQGKYKDAAC 467
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M+ GL PN ++++ LID+ +G + + + G+ PDVV Y++ I C
Sbjct: 468 LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCC 527
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A L +EM IQPN+VTY +L+ A RYG +++
Sbjct: 528 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 151/321 (47%), Gaps = 29/321 (9%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHL 420
+V+ YS +V + + + ALKV + M AG PN IT++++I+AC G+ ++QA+ +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNT--D 477
F+EM + G EP+ N L+ C ++ + R+F + + +D + NT D
Sbjct: 294 FDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVF----AEMQRRGIEQDIFTFNTLID 349
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVK 533
+ + + T N P TY+ ++ K C +
Sbjct: 350 AVCKGGQMELAASIMTTMRGKN-----------ISPNVVTYSTMIDGYGKLGC--FEEAI 396
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L ++M+ G+ P+ +S+ LID G + AL K M G+ DVV Y I
Sbjct: 397 SLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAY 456
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + K A LF++MK + PN++TY L+ + S+ G +V V+ + +AG K
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSN---VFTEFKRAGLK 513
Query: 654 ANDTYLKELIEEWCE-GVIQD 673
+ LI+ C+ G+++D
Sbjct: 514 PDVVLYSSLIDSCCKCGLVED 534
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 184/408 (45%), Gaps = 61/408 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN+ T+ID G G + ++ ++Y D++ V + +N+L+++ A +F L
Sbjct: 373 SPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALI 432
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+M+++G+ AD+ +YN L+ A G A ++ ++K +G++ +V TYS ++
Sbjct: 433 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMK---GEGLVP-NVLTYSALI 488
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A Q V + AG+ P+ + +SSLI++C GLVE A+ L +EM QAG +
Sbjct: 489 DSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 548
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ A + R G D++ ++
Sbjct: 549 PNIVTYNSLIDA------YGRY---------------------GQADKLEAVK------- 574
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPN 547
N PN V S + KP + N +D+ V A + +EM+ GL PN
Sbjct: 575 ANMPNSVQKIGERSME--VVRKPPPSQQN------ASDHTGVLAAVSVFHEMQQFGLKPN 626
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++++ +++AC +++ A +L+ MR DG V + + +R + +A LF
Sbjct: 627 VVTFSAILNACSRCASLQEASVLLEQMRFFDGW---VYGIAHGLLMGLREQVWVEAQRLF 683
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA------VYQDMW 648
+E+ Y L +G Q+ + V+++ W
Sbjct: 684 DEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAW 731
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ N + G N +++ ++ A G SG AL++ + M++ G P+++ Y T I C
Sbjct: 222 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACG 281
Query: 595 RSK-RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ LKQA +F+EM+ ++P+ +T+ +L+ SR G + Q+ V+ +M + G +
Sbjct: 282 KGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQR---VFAEMQRRGIE 338
Query: 654 ANDTYLKELIEEWCEG 669
+ LI+ C+G
Sbjct: 339 QDIFTFNTLIDAVCKG 354
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+I+I G G VE AL + ++ G +V AY+ + RS R ++A +F+ MK
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
+PNL+TY T++ A + G +++Q L ++ +M K G + + LI G +
Sbjct: 264 AGCKPNLITYNTIIDACGKGGV--DLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGL 321
Query: 672 QDKNQ 676
+ +Q
Sbjct: 322 WEDSQ 326
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 181/388 (46%), Gaps = 35/388 (9%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F++ V M KLG+ D ++N L+ C G A
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ E+ K + +V +Y+T++ MA+ V + M G PN +T+S++
Sbjct: 184 ELFNEM----VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI 239
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM EM++ G PN N ++ Q + A RLF+
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM----- 294
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G D NT + + + K+ + + V + + ++ +P +TYN LM
Sbjct: 295 ---VGRDVMPNTVTFTILVDGLCKEGMVSEARLV----FETMTEK-GVEPDISTYNALM- 345
Query: 524 ACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
D Y ++ LMNE + V G +P S+ ILI+ S ++ A +L M
Sbjct: 346 ----DGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++PD V Y+T ++ + R K+A +LF+EM Y PNLVTY+ LL ++G L E
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIE 664
L + + M + + N + LIE
Sbjct: 462 A---LKLLKSMKEKKLEPNIVHYTILIE 486
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 217/505 (42%), Gaps = 49/505 (9%)
Query: 212 RYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
R I PR ++ F F+ F KK+ + + + + N+Y +I+
Sbjct: 83 RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
S ++ + + + FN+L+N N +K +E++ M K G ++ SY
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ C GNT +A +++ K +E G K +V TYSTI+ + A++ +
Sbjct: 203 TVINGLCKTGNTSMAVDVF---KKMEQNGC-KPNVVTYSTIIDSLCKDRLVNDAMEFLSE 258
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ G+ PN T++S+++ N G + +A LF+EM+ PN+ IL+ +
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTPNFVPNSHYS 503
A +F + T + + Y+ D R+ N E K I P +H
Sbjct: 319 VSEARLVFETMTEKGVEPDI-STYNALMDGYCLQRLMN-EAKKVFEIMIRKGCAPGAHSY 376
Query: 504 SF-------DKRF-------------SFKPTTTTYNILMKACCTDYYRVKALMN---EMR 540
+ +R + P T TY+ LM+ C R K +N EM
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC-QLGRPKEALNLFKEMC 435
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ G PN +++ IL+D G+++ AL++LK M+E + P++V YT I+ + +L+
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE 495
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
A LF ++ +P++ TY +++ + G E +++ M G+ N
Sbjct: 496 VAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD---LFRKMEDDGFLPNSCSYN 552
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCR 685
+I+ + QNQ T R
Sbjct: 553 VMIQGFL--------QNQDSSTAIR 569
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++K M G ++ +Y ILL C G+ A ++ +K E K L+ ++
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK--EKK--LEPNIVH 480
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +++ A ++A ++ + G P+ T++ +I GL ++A LF +M
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G PNS N+++Q ++ A RL + V L
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 200/456 (43%), Gaps = 46/456 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I C R++ + +L++++ A + P++ + I C + ++ +
Sbjct: 193 IAACGNARQWERAVELLASMAARG------TPPDVLTYSSAIAACAKVSRWKEAVGLLRS 246
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ Q V N+ V+++ ++ + +++ K M +G+ D+ +Y+ ++ AC G
Sbjct: 247 MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + E + KGV+ ++ TYS ++ A W+ A+ + +M GV P+ I
Sbjct: 307 WEPAFRLLME---MPTKGVVA-NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVI 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SS I+ACA G E+A+ L EM G PN+ I++ AC + ++ A L +
Sbjct: 363 TYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM 422
Query: 460 TLSKTQVALGEDYDGNTD---RISNMEH-----KDKQSITNTPNFVPNSHYSSFD----- 506
+ +Y D + S E ++ + TPN + S+ S+ D
Sbjct: 423 QAHGVPPDV-INYSAAIDACAQASRWEQALWLLREMPATGLTPNVI--SYNSAIDACAKT 479
Query: 507 -------------KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
P TY+ ++ +C +AL EM+ G++P+ +S
Sbjct: 480 GRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSC 539
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
I+AC G E AL +L M G+ PD ++Y TAI C + R K+ L EM
Sbjct: 540 NTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMST 599
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ P+ ++Y + A S G E L + +DM
Sbjct: 600 VGLTPDAISYRFAMSACSVDGLWKEA---LVLLRDM 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 190/427 (44%), Gaps = 26/427 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+RE + D AL D ++ P+ + I CG + ++ + + ++
Sbjct: 158 LREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGT 217
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ ++S + A K + + ++M+ GV ++ Y+ + AC G A +
Sbjct: 218 PPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVD 277
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ +K + A G L DV TYST++ A W+ A ++ +M + GV N IT+S +I
Sbjct: 278 L---LKEMPAVG-LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVI 333
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---S 462
ACA G E+A+ L EM + G P+ + + AC + Q++ A L R + +
Sbjct: 334 GACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVT 393
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ G R E D + VP P Y+ +
Sbjct: 394 PNAISYGIVISACAKRGRWREAIDLLQEMQA-HGVP--------------PDVINYSAAI 438
Query: 523 KAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC + + + L+ EM GL+PN IS+ IDAC +G + A+++L+ M G++
Sbjct: 439 DACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLA 498
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV+ Y+ I C ++ ++A LF EM+ I P++V+ T + A ++ G E
Sbjct: 499 PDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDV 558
Query: 641 LAVYQDM 647
L M
Sbjct: 559 LGEMPTM 565
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 44/401 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID C G + + + ++ ++ V NI ++ ++ A ++ +
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + MQ+ GV D+ +Y+ + AC G +E G ++ + +GV + +Y ++
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQW---EEAVGLLREMPMEGVTP-NAISYGIVI 403
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A W+ A+ + ++M + GV P+ I +S+ I+ACA A EQA+ L EM G
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
PN N + AC + + A L R +++ A+G ++ D
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDL 523
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
M+ +Q IT P + N + AC + +AL +
Sbjct: 524 FREMQ---RQGIT---------------------PDVVSCNTAINACAQGGWWEEALDVL 559
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM T+GL P+ IS+ IDAC + + +L+ M G++PD ++Y A+ C
Sbjct: 560 GEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVD 619
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
K+A L +M + P++VTY + + A ++ G E
Sbjct: 620 GLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEA 660
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 55/391 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN +I C G + ++ + +++++ V ++ +++ ++ A ++ L
Sbjct: 393 TPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALW 452
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M G+ ++ SYN + AC G + +A E+ ++ + A G L DV TYS ++
Sbjct: 453 LLREMPATGLTPNVISYNSAIDACAKTGRSKIAVEL---LREMPAHG-LAPDVITYSAVI 508
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + W+ AL + +M G+TP+ ++ ++ INACA G E+A+ + EM G
Sbjct: 509 ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ + AC + ++ L R + ++
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLR----------------------------EMSTV 600
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
TP+ + +Y M AC D + L+ +M VGLSP+
Sbjct: 601 GLTPDAI-------------------SYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDV 641
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ I+AC G + A +L+ M G++PDV ++ AI C + A + E
Sbjct: 642 VTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFE 701
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
M+ + PN TY+T + A R G + Q
Sbjct: 702 MRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ AL +L M+E G+ PD Y++AI C +++ ++A L M P+++TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + A ++ E + + + M G K N
Sbjct: 225 SSAIAACAKVSRWKEA---VGLLRSMKGQGVKPN 255
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 183/411 (44%), Gaps = 16/411 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN + I VCG CG ++ ++ +++ V L V++++ N +
Sbjct: 228 PNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAAST 287
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + V ++ +YN+ + C G +E + + G ++ DV TY+ +V
Sbjct: 288 LREIHDWPVKPNVFNYNLAICTCTDCGEW---EEALDLLHFMREVGGVEPDVVTYNIVVA 344
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + A+++ +M G+ P+ I++++ I+AC + GL E+A+ +F EM +AG P
Sbjct: 345 ACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRP 404
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ AC+ A Q++ A F G D + + +
Sbjct: 405 NIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTAL 464
Query: 492 NTPNFVPN-----SHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
+ S KR KP +YN ++ AC C + + AL+ EM GL
Sbjct: 465 SACEVGEQWGRALSLLRDMPKR-GVKPVVISYNTVISACGKCGEGDQALALLREMPERGL 523
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ I A SG + A+++++ M G++ D + Y++A+ + R +QA S
Sbjct: 524 MPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALS 583
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L EM+ + P ++ Y +RA G E L + ++M AG N
Sbjct: 584 LLREMQGAGVSPTVICYTAAIRACGEAGKGDEA---LLLLREMPTAGVTPN 631
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 194/474 (40%), Gaps = 56/474 (11%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I C E+ + DL+ +R + P++ ++ CG G K+ I+ +
Sbjct: 307 ICTCTDCGEWEEALDLLHFMREVGGVE-----PDVVTYNIVVAACGKAGQGEKAIEIFRE 361
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ F + ++ + + L +++ M++ GV ++ ++N ++ AC AG
Sbjct: 362 MSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQ 421
Query: 340 TVLAQEIYGEV------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
A + + EV V D +Y+T + + W AL +
Sbjct: 422 WEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLR 481
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM GV P I+++++I+AC G +QA+ L EM + G P+ N + A +
Sbjct: 482 DMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSG 541
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-----------KDKQSITNTPNF 496
+ D A RL R + + VA D + ++ + H ++ Q +P
Sbjct: 542 RPDDAVRLMRE--MPRAGVAA--DAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTV 597
Query: 497 V-------PNSHYSSFDKRF---------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+ D+ P +Y+ + AC D + + AL+NE
Sbjct: 598 ICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNE 657
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M +GL+PN +T I CG G E A+ + M G+ P VV YT+A+
Sbjct: 658 MPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGE 717
Query: 599 LKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A L EMK I+PN TY ++ A G H V Q V +DM AG
Sbjct: 718 VDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQ---VQRDMASAG 768
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 154/353 (43%), Gaps = 19/353 (5%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T+I CG CG+ ++ A+ ++ + + ++ FNS + N+ + + + M +
Sbjct: 497 TVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRA 556
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV AD +Y+ L AG A + ++ ++ GV V Y+ ++ +A
Sbjct: 557 GVAADAITYSSALTGLAHAGRWEQALSL---LREMQGAGV-SPTVICYTAAIRACGEAGK 612
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M +AGVTPN ++S+ I+AC G EQ + L EM G PN C
Sbjct: 613 GDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTA 672
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ C Q++RA FRS S Q + G T +S + H + +
Sbjct: 673 AITGCGIGGQWERAVATFRSMIASGIQPTV----VGYTSAVSALAHCGEVDLA------- 721
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
S + +P TY ++ AC + V + +M + G++P + I
Sbjct: 722 LELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIR 781
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A G GN A +L M G+ P V Y AI C +S + ++A L +EM
Sbjct: 782 ASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEM 834
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 168/373 (45%), Gaps = 57/373 (15%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+ + RA + ++ ++ +V++ ++ A ++ L++ M +LG M + N
Sbjct: 104 ELAEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVN 163
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L AC AG QE G ++ A G+ +LDV +Y+ + W++AL + +
Sbjct: 164 AALDACGKAGRV---QEALGLMRDARASGI-ELDVVSYNCAIPACVTGGDWELALSMIRE 219
Query: 389 MLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M + G+ PN IT+ + I C G ++A L EM G + L+ V +
Sbjct: 220 MEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGG---------VPLKTSVYSA 270
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F+ AFR W + + L E +D
Sbjct: 271 VFN-AFRRVDHWQAAAST--LREIHD---------------------------------- 293
Query: 508 RFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV-GLSPNHISWTILIDACGGSGNV 564
+ KP YN+ + C C ++ L++ MR V G+ P+ +++ I++ ACG +G
Sbjct: 294 -WPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQG 352
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A++I + M E G+ PDV+++TTAI C ++A S+F EM+ ++PN++T+ +
Sbjct: 353 EKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAV 412
Query: 625 LRARSRYGSLHEV 637
+ A G E
Sbjct: 413 MSACIAAGQWEEA 425
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 177/457 (38%), Gaps = 80/457 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN Y +D CG G ++ + D R+ + L++ +N + V D + L +
Sbjct: 157 PNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSM 216
Query: 312 YKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ + G+ + +Y +K C G A + E+K G + L YS +
Sbjct: 217 IREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKD----GGVPLKTSVYSAVF 272
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGC 429
F WQ A ++ V PN ++ I C + G E+A+ L M + G
Sbjct: 273 NAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGV 332
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP+ NI++ AC +A Q ++A +FR ++V + D T IS
Sbjct: 333 EPDVVTYNIVVAACGKAGQGEKAIEIFR----EMSEVGIKPDVISFTTAISACGSCG--- 385
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCT--------DYY--------- 530
+ S F +R +P T+N +M AC D++
Sbjct: 386 -------LSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGA 438
Query: 531 ------------------------------------RVKALMNEMRTVGLSPNHISWTIL 554
R +L+ +M G+ P IS+ +
Sbjct: 439 ANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTV 498
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I ACG G + AL +L+ M E G+ PDV+ + +AI S R A L EM +
Sbjct: 499 ISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGV 558
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +TY + L + G +Q L++ ++M AG
Sbjct: 559 AADAITYSSALTGLAHAGRW---EQALSLLREMQGAG 592
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 5/206 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN++ I CG G + + A+ ++ + +T N + + + + ++ +
Sbjct: 629 TPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVA 688
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++M G+ + Y + A G LA E+ E+K E G+ + + TY+ ++
Sbjct: 689 TFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMK--EEAGI-EPNEQTYAAVI 745
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +V+ DM SAG+TP + S I A G +A L EM AG
Sbjct: 746 LACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVP 805
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF 456
P C N + AC ++ ++ A L
Sbjct: 806 PTVSCYNAAITACGKSGKWQEALDLL 831
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C + ++ M +G PN +DACG +G V+ AL +++ R G+ DVV+
Sbjct: 137 CFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVS 196
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y AI CV + A S+ EM+ Y I+PN +TY ++ R G E L
Sbjct: 197 YNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEM 256
Query: 645 QD 646
+D
Sbjct: 257 KD 258
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+PN + I CGI G + ++ A + + + + + + S ++ AH ++ LE
Sbjct: 664 TPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALE 723
Query: 311 VYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M ++ G+ + +Y ++ AC G L ++ + + + G+ + Y +
Sbjct: 724 LLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQ---RDMASAGITP-RLTGYLSA 779
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + W A + +M +AGV P +++ I AC +G ++A+ L +EM G
Sbjct: 780 IRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGL 839
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+S L A + ACQ +A R ++ L + + + + G D +
Sbjct: 840 VRDSG----TLSAAISACQ--KAGRGVKAAGLVEEMLEMAREKGGERDSLEG 885
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 58/403 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP +I++ G MK+ +++++Q +TLN ++ L++ V D
Sbjct: 298 SPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFS 357
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M + G+ D +YNILLKA C + A ++ G +K ++ TY TI+
Sbjct: 358 VFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQ----TYITII 413
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +MA K +M AG PN T++ +++ G +++A + +EM AG +
Sbjct: 414 DGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQ 473
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L+Q + AF+ + R++ + K
Sbjct: 474 PNFRSYTTLMQGFASIGEIGLAFKCLK--------------------RVNEITQK----- 508
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
P +Y L+KACC A+ EM G+ N+
Sbjct: 509 ----------------------PPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNN 546
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ L+D G++ A I++ MR++G +PD+ +YT+ + C ++ +++A EE
Sbjct: 547 YIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEE 606
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
MK +QPNL TY L+ + S+ ++ L Y +M AG
Sbjct: 607 MKQQDLQPNLQTYTILIHG---WTSVSHPEKALICYDEMKAAG 646
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 190/444 (42%), Gaps = 42/444 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ N +R + ++L A+ + + PN II G G+ + ++
Sbjct: 161 YNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSV 220
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S+N N+ +++S+++ A +++ + +M++ G+ A + YNIL+
Sbjct: 221 SENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEA 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ ++K G L TY ++ ++ AL+ ++M + G+T N T+
Sbjct: 281 QCLNVFHKLKARIDTG-LSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTY 339
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S L++ G A +FE+M +AG EP+ NILL+A ++ Q RA +L
Sbjct: 340 SMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQL------ 393
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------- 512
+ M+ + T + + + D R ++K
Sbjct: 394 -----------------LGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAG 436
Query: 513 --PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TTYN++M R ++++EM G+ PN S+T L+ G + A
Sbjct: 437 CRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAF 496
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ LK + E P +++Y + +K C ++ R++ A ++ EEM + N + TLL
Sbjct: 497 KCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGW 556
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGY 652
++ G + E + Q M + G+
Sbjct: 557 AQRGDMWEA---YGIMQKMRQEGF 577
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 169/389 (43%), Gaps = 27/389 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+I G GD +R +E +R+ + +++ +N+L+ + A +L+ + + M+ G
Sbjct: 129 LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEG 188
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + A+++ ++ +GN A++ + +V YS+I+ + A
Sbjct: 189 IFPNAATFSAIISGYGSSGNVEAAEKWF----QRSVSENWNHNVAIYSSIIHAYCKAGNM 244
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM---LQAGCEPNSQCC 436
+ A + DM G+ ++ L++ A + Q +++F ++ + G P +
Sbjct: 245 ERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTY 304
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ + + ++ ++ K A G + NT + + N
Sbjct: 305 GCLINL------YTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANA--- 355
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
+S F+ +P TYNIL+KA C +A L+ M+T G SP ++
Sbjct: 356 -----FSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYI 410
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID +G+V A + + M+ G P+ Y + V+ ++ +A S+ +EM+
Sbjct: 411 TIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELA 470
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+QPN +Y TL++ + G + +CL
Sbjct: 471 GVQPNFRSYTTLMQGFASIGEIGLAFKCL 499
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 14/297 (4%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ +++ + A+ Q A+ E+M G+ PN T+S++I+ ++G VE A F+
Sbjct: 158 VHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQ 217
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ N + ++ A +A +RA L + LG Y+ D +
Sbjct: 218 RSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGL-YNILMDGYARC 276
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
H + Q + V + + D S PT TY L+ +KAL EM+
Sbjct: 277 -HIEAQCLN-----VFHKLKARIDTGLS--PTAVTYGCLINLYTKLGKMMKALEFCKEMK 328
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G++ N ++++L+D G+ A + + M E G+ PD V Y +K +S+++
Sbjct: 329 AQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMT 388
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+A L MK P + TYIT++ + G +V+ +M AG + N T
Sbjct: 389 RAIQLLGRMKTRGCSPTIQTYITIIDGFMKTG---DVRMAYKTVSEMKLAGCRPNAT 442
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + F K D+ A + K PN I+ G ++ ++ +++
Sbjct: 409 YITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEME 468
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + +LM A ++ + K + ++ + SY LLKACC AG
Sbjct: 469 LAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQ 528
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
A + E+ A + ++ + ++T++ +A W+ A + + M G TP+ +
Sbjct: 529 NAIAVTEEM----AFAGVPMNNYIFNTLLDGWAQRGDMWE-AYGIMQKMRQEGFTPDIHS 583
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++S +NAC AG +++A EEM Q +PN Q IL+ ++A
Sbjct: 584 YTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKAL 636
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI G G+ GA + MR G+ V AY I+ + ++ L+ A S EEM+
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC--- 667
I PN T+ ++ S YGS V+ +Q + N +I +C
Sbjct: 186 IEGIFPNAATFSAII---SGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAG 242
Query: 668 -----EGVIQDKNQNQGEVTL 683
E ++ D + E TL
Sbjct: 243 NMERAEALVADMEEQGLEATL 263
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N YI T++D GD ++ I + +R + T +I+ + S +N A D++ E
Sbjct: 545 NNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETI 604
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M++ + ++ +Y IL+ + A Y E+K A G++ Y + +
Sbjct: 605 EEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMK---AAGLIPDKPLYYCIVTSL 661
Query: 373 FADA 376
+ A
Sbjct: 662 LSKA 665
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 29/428 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F K DL AL + S +I G CG +++ AI+E++R +
Sbjct: 280 FAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPR 339
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N+L+ V A LK V M++ GV + +Y+ L+ A AG A+ +
Sbjct: 340 TRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIV-- 397
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +EA V + + + +S I+ + D WQ + +V +M ++GV P+ + ++ +I+
Sbjct: 398 -LKEMEASNV-QPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTF 455
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSK 463
++ AM F+ ML G EP++ N L+ A + DRA LF ++
Sbjct: 456 GKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCN 515
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T + + G+ +R ++ K+ + + VPNS T T I +
Sbjct: 516 TTFNIMINSFGDQERWDDV--KNLLAHMRSQGLVPNS-------------VTYTTLIDIY 560
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ +++M+ GL P+ + LI+A G E A+ + MR DG+ P +
Sbjct: 561 GKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSL 620
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+A + I +R +AF++ + MK ++P++VTY TL++A R +V +V
Sbjct: 621 LALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVP---SV 677
Query: 644 YQDMWKAG 651
Y++M +G
Sbjct: 678 YEEMILSG 685
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 191/429 (44%), Gaps = 45/429 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L++ A +DL+ L + M++ G +D +Y+++
Sbjct: 180 QSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLI 239
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ ++ + Q++Y E++ + L+LDV + I+ FA A AL+
Sbjct: 240 IRSLMRKNRVDSAILQKLYREIECDK----LELDVQLSNDIIVGFAKAGDLSKALEFLGV 295
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ +G++ T T ++I A N G +A +FEEM G +P ++ N LL+ V+A
Sbjct: 296 VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 449 FDRAFRLFRSWTLSKTQVALGE-------DYDGNTDR-------ISNMEHKDKQSITNTP 494
A F + ++ V+ E D GN R + ME + Q
Sbjct: 356 LKDA--EFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVF 413
Query: 495 NFVPNSHYSSFDKRFSF-----------KPTTTTYNILM----KACCTDYYRVKALMNEM 539
+ + +S+ + + SF +P YN+++ K C D+ A + M
Sbjct: 414 SRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDH--AMATFDRM 471
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID +G + A ++ + M E G SP + I +R
Sbjct: 472 LSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERW 531
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+L M+ + PN VTY TL+ + G ++ +CL DM AG K + T
Sbjct: 532 DDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECL---DDMKAAGLKPSSTMY 588
Query: 660 KELIEEWCE 668
LI + +
Sbjct: 589 NALINAYAQ 597
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 104/262 (39%), Gaps = 42/262 (16%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D +F N + FGK L A+ +D P+ T+ID G + ++
Sbjct: 442 RPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEE 501
Query: 278 IYEDL-----------------------------------RSQNVTLNIYVFNSLMNVNA 302
++E++ RSQ + N + +L+++
Sbjct: 502 LFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYG 561
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+F +E +M+ G+ YN L+ A G L+++ + + G LK
Sbjct: 562 KSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG---LSEQAVSAFRAMRVDG-LK 617
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ ++++ F + + A V + M + P+ +T+++L+ A ++ +
Sbjct: 618 PSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSV 677
Query: 421 FEEMLQAGCEPNSQCCNILLQA 442
+EEM+ +GC P+ + +L A
Sbjct: 678 YEEMILSGCTPDRKARAMLRSA 699
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y+IL+ A +A + R L+P +++ LI AC + ++E AL ++ MR+D
Sbjct: 171 YSILIHALGQSEKLYEAFLLSQRQ-NLTP--LTYNALISACARNNDLEKALNLITRMRQD 227
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAF--SLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G D V Y+ I+ +R R+ A L+ E++ +++ ++ ++ ++ G L
Sbjct: 228 GYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLS 287
Query: 636 EVQQCLAVYQ 645
+ + L V Q
Sbjct: 288 KALEFLGVVQ 297
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 202/474 (42%), Gaps = 87/474 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--- 278
++F + + K LV A+ + K P++ C +++ GD +K +
Sbjct: 155 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLL------GDLLKGNKVELF 208
Query: 279 ---YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTL--------------EVYKNMQ 316
++ + + V ++Y + ++++ N D K L E+ ++M
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G++ D+ +Y+IL+ C+ + A+ + E+ + LK + TY+ ++ F
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG----LKPEPITYNALIDGFMRQ 324
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A ++K++M++ G+ N I W++L+N AG +E+A+ + +EM++ G EP+SQ
Sbjct: 325 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 384
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
++L++ RAF L
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEM------------------------------------- 407
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
K+ PT TY++++ C + A++ EM GL PN + +T L
Sbjct: 408 ----------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ A G VE + IL+ MRE G+ PDV Y + I ++KR+++A + EM ++
Sbjct: 458 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN TY + S+ G + + + +M G N LIE C+
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADR---YFNEMLSCGVLPNVGIYTALIEGHCK 568
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 190/448 (42%), Gaps = 40/448 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ +++ A D KK +P + II+ CG+ + AI ++ + N
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+ +LM +A + ++ + + + M++ G++ D+ YN L+ C A A+ E+
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LE + L+ + TY + ++ A ++A + +MLS GV PN +++LI
Sbjct: 513 --LERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLS 462
G V +A +F +L + Q ++L+ + AF +F +
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ G GN D+ S + ++ I P TYNIL+
Sbjct: 629 YNSLISGSCKQGNVDKASQL--LEEMCIK------------------GINPDIVTYNILI 668
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + R K L +++ GL+PN +++ ++D S N A Q+L+ M G+
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 728
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD Y + C + ++ ++A LF+EM + V++ TL+ + G L E
Sbjct: 729 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHL 787
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE 668
L ++M + + N LI+ C+
Sbjct: 788 L---EEMIEKQFIPNHVTYTSLIDHNCK 812
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 208/496 (41%), Gaps = 62/496 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F ++ D+ A R D N+ I T+++ G+C G K+ I
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN--GVCKAGKMEKALEIM 369
Query: 280 EDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + V + ++ L+ + ++ E+ M+K + + +Y++++ C
Sbjct: 370 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 429
Query: 338 GN---------------------------TVLAQEIYGE-----VKHLEAKGVLKLDVFT 365
GN T A+E E ++ + +G+L DVF
Sbjct: 430 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP-DVFC 488
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ F AK + A +ML + PN T+ + I+ + AG +E A F EML
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G PN L++ + AF +FR + LS+ + +D + I +
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR-FILSRRVL---QDVQTYSVLIHGLSRN 604
Query: 486 DKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K + + F + P TYN L+ C KA L+ EM
Sbjct: 605 GKM----------HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++P+ +++ ILID +G +E A + + G++P+ V Y + +SK
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 714
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AF L EEM + P+ Y +L + + ++ L ++Q+M + G+ A+
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKE---EKFEKALDLFQEMLEKGF-ASTVSFNT 770
Query: 662 LIEEWCE-GVIQDKNQ 676
LIE +C+ G +Q+ N
Sbjct: 771 LIEGYCKSGKLQEANH 786
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 185/416 (44%), Gaps = 60/416 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
F+ + K ++ A R ++ PN+ I +I+ G C G+ ++ +++ + S
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCKEGNVTEAFSVFRFILS 584
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ ++ L++ + + K ++ +Q+ G++ + +YN L+ C GN
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ + KG+ D+ TY+ ++ A + A + +D+ G+TPN +T++
Sbjct: 645 ASQL---LEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++++ + A L EEML G P++ N++L C + +F++A LF+
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM--- 757
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+K F+ +T ++N L+
Sbjct: 758 ------------------------------------------LEKGFA---STVSFNTLI 772
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ C +A L+ EM PNH+++T LID +G + A ++ M+E +
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
P YT+ + + + +LFEEM I+P+ +TY ++ A R G++ E
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 543 GLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL P+ ++ ILI+ C + E L +L+ M + G+ P+ + Y I +R ++Q
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLE-MIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AF + +EM I+ NL+ + TLL + G + ++ L + Q+M + G + +
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM---EKALEIMQEMMEKGVEPDSQTYSL 386
Query: 662 LIEEWCEG 669
LIE C G
Sbjct: 387 LIEGHCRG 394
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 42/372 (11%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY M G+ ++ ++N ++K C G A+ I G + H A D FTY+++
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACP----DTFTYTSL 243
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A ++ + M+ G PN++T+S+LIN + G +E+AM + EEM+ G
Sbjct: 244 IIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGI 303
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
EP I + + +A + A +L + T + G DG +
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIG 363
Query: 482 MEHKDKQSITNTPNFVPNS-HYSSF------DKRFSFK-------------PTTTTYNIL 521
+ HK VP + YS+ + RF P T TYN++
Sbjct: 364 VYHK-----MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C+ Y + A+ ++M G SPN I++ I+I G + A+++L++M+ +G+
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D Y I R +L+ AFSLF EM + I PN+VTY ++ Y ++ +V
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING---YLTVAKVDD 535
Query: 640 CLAVYQDMWKAG 651
LA++ M ++G
Sbjct: 536 ALALFWKMVESG 547
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 192/461 (41%), Gaps = 41/461 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ KK PN+ +I G + + +Y + + + +++L+N
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ +F L +++ M + + +YN+++K C G A I+ ++ K
Sbjct: 386 QLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM----LKA 441
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+V TY+ I+ ++ + A+++ E M G+ +T T+++LI+ + G +E A
Sbjct: 442 GPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHA 501
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT-QVALGEDYD--- 473
LF EM++ G PN N ++ + + D A LF W + ++ V Y+
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF--WKMVESGNVPSSGTYNMMI 559
Query: 474 ---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
T+RIS E+ + + P TY + C +
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQ-----------------GLLPNVITYTSFIDGLCKNGR 602
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A + +EM+ PN +++ LID G E A ++L +DG P+V YTT
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTT 658
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ R +A L E MK +QP+ Y LL + + EV+ L ++ M
Sbjct: 659 LVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN---LEVESALKIFDSMV 715
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNS 689
G++ + K LI C+ + K Q + L + NS
Sbjct: 716 TTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNS 756
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 126/311 (40%), Gaps = 28/311 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G + +++ ++ ++ N+ +N+++N + + L ++ M + G + +Y
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+++ A+ G+ + +G+L +V TY++ + +A K+
Sbjct: 556 NMMISGFSKTNRISEAENFCGK---MVKQGLLP-NVITYTSFIDGLCKNGRTSLAFKIFH 611
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M PN T+SSLI+ G E A E +L GCEPN L++
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKG 667
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A +L S + K + E E + N S FD
Sbjct: 668 RCYEADQLVES--MKKKGLQPSE------------EIYRALLVGQCKNLEVESALKIFDS 713
Query: 508 RFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F+P + Y L+ A C +R KA + M + + + WT+L+D G
Sbjct: 714 MVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE 773
Query: 564 VEGALQILKIM 574
+ +L++L +M
Sbjct: 774 TDLSLELLHVM 784
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 201/468 (42%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D A+R ++ + +P +I G G ++ A++E++
Sbjct: 243 LMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEI 302
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK V M+K GV D +Y++L+ AG
Sbjct: 303 RENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRW 362
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA V + + + +S I+ + D WQ + +V +DM S+GV P+
Sbjct: 363 ESARIV---LKEMEASNV-QPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHF 418
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM FE ML G P+ N L+ ++ + D A LF
Sbjct: 419 YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELF---- 474
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S M+ + + P TTYNI
Sbjct: 475 -------------------SEMQQR------------------------GYSPCITTYNI 491
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
++ + + +V A +++M++ GL PN I++T L+D G SG A++ L++++
Sbjct: 492 MINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 551
Query: 577 ---------------------------------DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+G++P ++A + I +R +AF
Sbjct: 552 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAF 611
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK I+P++VTY TL++A R + + Q+ AVY++M +G
Sbjct: 612 AVLQYMKENNIEPDVVTYTTLMKALIR---VEKFQKVPAVYEEMVASG 656
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 179/429 (41%), Gaps = 45/429 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L+ A D++ L + M++ G D +Y+ +
Sbjct: 151 RSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 210
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ + ++ + Q++Y E++ +++D + I+ F+ A A++
Sbjct: 211 IQYLTRSNKIDSPILQKLYAEIE----TDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAM 266
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
S G+ P T ++I A N+G +A LFEE+ + G EP ++ N LL+ V
Sbjct: 267 AQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGS 326
Query: 449 FDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + K V E Y D ++ + I N PNS+
Sbjct: 327 LKDA--EFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVF 384
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ A M
Sbjct: 385 SRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDH--AMATFERM 442
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID SG + A ++ M++ G SP + Y I +R
Sbjct: 443 LSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRW 502
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+Q + +M+ +QPN +TY TL+ + G + +CL V + G+K T
Sbjct: 503 EQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS---TGFKPTSTMY 559
Query: 660 KELIEEWCE 668
LI + +
Sbjct: 560 NALINAYAQ 568
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
SP + +I+ G + + A ++SQ + N + +L++V +F+ +E
Sbjct: 483 SPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIE 542
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++ G YN L+ A G + LA + + + +G L + ++++
Sbjct: 543 CLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF---RLMTTEG-LTPSLLALNSLI 598
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + + A V + M + P+ +T+++L+ A ++ ++EEM+ +GC
Sbjct: 599 NAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCT 658
Query: 431 PNSQCCNILLQA 442
P+ + +L A
Sbjct: 659 PDRKARAMLRSA 670
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 24/360 (6%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN- 339
R V ++Y ++ LM+ A ++ L + M+ GV D ++ + AC G
Sbjct: 61 REDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGGQW 120
Query: 340 ----TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+L Q + + A G L +V T+S+ V +A W+ AL + + M GV
Sbjct: 121 ERAVALLDQRALRLLGEMAAVG-LSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVP 179
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+S+ ++AC AG A+ + M A C PN Q + AC +A ++ RL
Sbjct: 180 PNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEW----RL 235
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + + + IS + + + Q N +P+ +P
Sbjct: 236 AQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPS---------MGVQPN 286
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y + AC + + R A+ +MR+ G+ + +S+T IDAC G E AL +L
Sbjct: 287 MWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLD 346
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
MR++G+ P V +++TAI C + ++ +A +L EM+ + PN V++ + A R G
Sbjct: 347 EMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAG 406
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 201/501 (40%), Gaps = 95/501 (18%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R GR + V+ +L + GVAP D F N C + G+ E V L
Sbjct: 81 RSGRWEEVLVLLDVMRSEGVAP----DHFAFGAAVNACAK---GGQWERAVAL------- 126
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
LD+ R ++L V L+ F + V G AL
Sbjct: 127 ------LDQ--RALRLLGEMAAVGLSPNV--------TTFSSAVAACGNAGQWERALGLL 170
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D + PN + + CG G + + I +R+ N N+ + + ++ A
Sbjct: 171 DQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKA 230
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ + + M++ GV ++ ++N + A GN QE ++ + + GV + +
Sbjct: 231 GEWRLAQGLLAEMREKGVAPNVITFNSAISAL---GNGGQWQEALNLLRDMPSMGV-QPN 286
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+++Y+ V D W AL V E M S G+ + +++++ I+ACA G E A+ L +
Sbjct: 287 MWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLD 346
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM G P + + + AC + Q+ RA L R
Sbjct: 347 EMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLR------------------------- 381
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ + + +PN V ++N + AC + +L+++M
Sbjct: 382 ---EMEEVGVSPNEV-------------------SFNAAIDACGRAGQWRAALSLLDKMS 419
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIM-----REDG-MSP----DVVAYTTAI 590
+ G+ I++ +I ACG A+ +L+ M + DG M+P DVV+Y+ AI
Sbjct: 420 SAGVPRGTITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAI 479
Query: 591 KVCVRSKRLKQAFSLFEEMKH 611
CVR+ ++A SL E ++
Sbjct: 480 DACVRAGEWEEAISLVELLRR 500
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 154/375 (41%), Gaps = 65/375 (17%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + F V GK AL + PN+ ID CG G++ ++
Sbjct: 178 VPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQ 237
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++R + V N+ FNS ++ N + L + ++M +GV +M SY + AC
Sbjct: 238 GLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTAC 297
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A ++ + + ++G+ + D +++ + A W+MAL + ++M G+
Sbjct: 298 GDNNRWARALAVH---EQMRSRGI-RGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGI 353
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P ++S+ I+AC +A+ L EM + G PN N + AC A Q+ A
Sbjct: 354 PPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALS 413
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L DK S P
Sbjct: 414 LL-----------------------------DKMSSAGVPR------------------G 426
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEM-----RTVG-LSP----NHISWTILIDACGGSG 562
T TYN ++ AC ++ R +++ EM +T G ++P + +S++ IDAC +G
Sbjct: 427 TITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAG 486
Query: 563 NVEGALQILKIMRED 577
E A+ +++++R D
Sbjct: 487 EWEEAISLVELLRRD 501
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ EM VGLSPN +++ + ACG +G E AL +L M E+G+ P+ ++ A+
Sbjct: 130 RALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAV 189
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
C ++ + + A ++ M+ PN+ TY + A + G Q LA
Sbjct: 190 SACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLA 241
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N R G+ + ++++L+ A SG E L +L +MR +G++PD A+ A+ C +
Sbjct: 58 NLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKG 117
Query: 597 KRLKQAFSLFE--------EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ ++A +L + EM + PN+ T+ + + A G+ + ++ L + M
Sbjct: 118 GQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAA---CGNAGQWERALGLLDQMA 174
Query: 649 KAGYKAND 656
+ G N+
Sbjct: 175 EEGVPPNE 182
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 187/431 (43%), Gaps = 59/431 (13%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
+D H +P+++ +I+ G G Y S + + ++ + V+ +I +N+++N A
Sbjct: 169 FDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCAR 228
Query: 304 ---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
D + L ++ M+ G+ AD+ +YN LL AC G L E + + G+L
Sbjct: 229 GGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRG---LGDEAEMVFRTMNEGGILP 285
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ TYS +V+ F + ++ ++M S G P+ +++ L+ A A +G +++AM +
Sbjct: 286 -DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGV 344
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F +M AGC PN+ +ILL ++D LF +S T+
Sbjct: 345 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTE--------------- 389
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNE 538
P TYNIL+ Y V L ++
Sbjct: 390 --------------------------------PNAATYNILINVFGEGGYFKEVVTLFHD 417
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + PN ++ LI ACG G E A +IL M E G+ P AYT I+ ++
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 477
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++A F M +P + TY +L++ ++ G E + A+ M ++G N
Sbjct: 478 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESE---AILLKMGQSGVARNRDT 534
Query: 659 LKELIEEWCEG 669
+IE + +G
Sbjct: 535 FNGVIEAFRQG 545
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 194/464 (41%), Gaps = 60/464 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ S+L D KK SP++ T+I+ C G D+ + ++ +
Sbjct: 184 FTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQM 243
Query: 283 RSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + + +I +N+L++ A L E V++ M + G++ D+ +Y+ L++ G
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETF---GKL 300
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ +K +E+ G D+ +Y+ +++ A + + A+ V M AG PN T
Sbjct: 301 NRLEKVSELLKEMESGGSFP-DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAAT 359
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+N G + LF EM + EPN+ NIL+ E F LF
Sbjct: 360 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFH--- 416
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
D + + +P TY
Sbjct: 417 ----------------DMVEE----------------------------NVEPNMETYEG 432
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ AC + K ++ M G+ P+ ++T +I+A G + E AL M E G
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
P V Y + I++ + K++ ++ +M + N T+ ++ A + G E
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEE-- 550
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
+ Y +M KA ++ L+ ++ +C G++++ + GE+
Sbjct: 551 -AIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEI 593
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 184/451 (40%), Gaps = 58/451 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I +I V G G K + I++++
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S V +++ F +L+N + ++ +LE+ M+K V + +YN ++ +C G
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGG-- 230
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ +E+ G + +G+ + D+ TY+T++ A A V M G+ P+ T
Sbjct: 231 LDWEELLGLFAQMRHEGI-QADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITT 289
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+ +E+ L +EM G P+ N+LL+A ++ A +FR
Sbjct: 290 YSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFR--- 346
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ Q A VPN+ TY+I
Sbjct: 347 --QMQGA---------------------------GCVPNA---------------ATYSI 362
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y V+ L EM+ PN ++ ILI+ G G + + + M E+
Sbjct: 363 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 422
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P++ Y I C + + A + M + P+ Y ++ A YG +
Sbjct: 423 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEA---YGQAALYE 479
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ L + M + G K LI+ + +G
Sbjct: 480 EALVAFNTMNEVGSKPTVETYNSLIQMFAKG 510
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + + + +G+ AL A++ + S P + ++I + G Y +S
Sbjct: 458 VVPSSKA-YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKES 516
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + V N FN ++ +F ++ Y M+K D + +L
Sbjct: 517 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSV 576
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E +GE+K L G+L V Y ++ V+A A W A ++ ++M +
Sbjct: 577 YCFAGLVEESEEQFGEIKAL---GILP-SVMCYCMMLAVYAKADRWDDAHQLLDEMFTNR 632
Query: 394 VTPNTITWSSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ +I +N +VE ++FE++ GC + N LL+A Q
Sbjct: 633 VSNIHQVIGQMIRGDYDDDSNWQMVE---YVFEKLKSEGCSLGVRFYNTLLEALWWLGQK 689
Query: 450 DRAFRLFRSWT 460
+RA R+ T
Sbjct: 690 ERATRVLNEAT 700
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 206 DVNLAIRYACIVPRADI--LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
D+ L ++ + P A + N E G +++V+ +D ++++ PNM +I
Sbjct: 378 DLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF--HDMVEENVE-PNMETYEGLI 434
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
CG G + ++ I + + V + + ++ + L + M ++G
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 494
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YN L++ G L +E + + GV + + T++ +++ F ++
Sbjct: 495 PTVETYNSLIQMFAKGG---LYKESEAILLKMGQSGVAR-NRDTFNGVIEAFRQGGQFEE 550
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+K +M A P+ T ++++ AGLVE++ F E+ G P+ C ++L
Sbjct: 551 AIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLA 610
Query: 442 ACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNME 483
+A ++D A +L +S +G+ G+ D SN +
Sbjct: 611 VYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQ 655
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 190/418 (45%), Gaps = 31/418 (7%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K SPN+ ++++ G +++ ++E+L++ T ++ ++ L+N A +
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LEV MQ G ++ +YN L+ AG A + E++ G + DV TY
Sbjct: 62 AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD---NGCVP-DVRTY 117
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ A A + +M G P+T T++SLI G ++AM L EEM +
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGE--DYDG 474
GC P+ + L+ + + +AF+LF+ S T + ALG+ D
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFD--KRFSFKPTTTTYNILMK 523
+ + M+ + + T N + Y+ D KR KP TY+ L+
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLIT 297
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+A ++ +M G P+ I++ LI+ G +G + A ++ M+ G +P
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y+T I ++ R++ A LFEEM+ IQP+L TY +++ + G + + +
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADR 415
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 151/336 (44%), Gaps = 48/336 (14%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN LL A AG AQ ++ E+K + DV +YS ++ A W+ A
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAK----WTPDVVSYSCLINSLGRAGKWEAA 63
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L+V +M + G PN T+++L++ AG ++A+ L EM GC P+ + N L+
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+A + AF LF E +++ + +T F NS
Sbjct: 124 LGKAGRLSEAFTLF-------------------------AEMRERGCVPDT--FTYNSLI 156
Query: 503 SSFDK---------------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
K R P TY+ L+ D VKA L EM+ G
Sbjct: 157 YGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRK 216
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++T L+DA G +G V+ AL++L M+E G+ P VV Y I + L +A++L
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+EMK +P++VTY L+ + L E Q L
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL 312
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 207/491 (42%), Gaps = 65/491 (13%)
Query: 205 PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID 264
PDV + Y+C++ G+ +AL + PN++ T++D
Sbjct: 42 PDV---VSYSCLI-----------NSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVD 87
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G G + ++ + ++R ++ +N L++ A L ++ M++ G +
Sbjct: 88 CLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP 147
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D +YN L+ G + A E+ ++ +E G DV TYS+++ A
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMEL---LEEMERHGC-PPDVMTYSSLITGLGKDGETVKA 203
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ ++M G P++IT+++L++A AG V+ A+ L +EM + G +P N L+
Sbjct: 204 FKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263
Query: 443 CVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ A+ L +++ T + D + ME +
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323
Query: 491 TNTPNFVPNSHYSS---------FDKRFS--FKPTTTTYNILMKACCTDYYRVKA---LM 536
T T N + N + FD+ S P TY+ L+ A RV++ L
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA-LGKAARVESACVLF 382
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +VG+ P+ ++ +I G +G V+ A ++ MR G+SPDV+ Y + R
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R K+A +FE+MK + P++ TY LL S+ EV +
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSK---TKEVDDACGL------------- 486
Query: 657 TYLKELIEEWC 667
LKELIE+ C
Sbjct: 487 --LKELIEQGC 495
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 196/446 (43%), Gaps = 44/446 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ + ++H P++ ++I G G+ +K+ ++++++ + + F +LM+
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMD 227
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A + LE+ M++ GV + +YN L+ G+ V A + E+K +
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK----RN 283
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
K DV TYS ++ A A +V + M G P+TIT+++LIN AGL+ A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSKTQVA 467
LF+ M GC P+ + L+ A +A + + A LF +T
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITV 403
Query: 468 LGEDYD-GNTDRI-SNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFK------------ 512
LG+ + DR+ S M K +P+ + N+ +S + FK
Sbjct: 404 LGKAGQVDDADRLFSEMRGKGL-----SPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Query: 513 ---PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TY+ L+ + L+ E+ G + + + + ++ GNV+ A
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L+ G+ P +Y I ++ R+ +AF+ E++K +P++V+Y +L+ A
Sbjct: 519 HELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISA 578
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ G ++ + ++M K G K
Sbjct: 579 LGQTG---QIDTAFELLEEMSKRGLK 601
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 177/445 (39%), Gaps = 78/445 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + GK + AL D K+ P + +I G GD +++ + ++
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ ++ L+ + A L +V K M+K G D +YN L+ AG
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 340 TVLAQEIY----------------------GEVKHLEAKGVL---------KLDVFTYST 368
A ++ G+ +E+ VL + D+FTY +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ V A A ++ +M G++P+ IT+++ +N+ G ++A +FE+M ++G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ + LL + + D A L K + G +D +++ +
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLL------KELIEQGCAFD-------SLKFDECL 506
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
I + V +H L+ + GL P
Sbjct: 507 EILTSWGNVDEAH--------------------------------ELLQFANSKGLWPGA 534
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ LIDA +G V A L+ ++E G PD+V+Y++ I ++ ++ AF L EE
Sbjct: 535 SSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594
Query: 609 MKHYQIQPNLVTYITLLRARSRYGS 633
M ++ + +Y L+R +G+
Sbjct: 595 MSKRGLKLSPRSYSNLVRKLQDWGA 619
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 21/317 (6%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLE-----LFDGSGFKLLKNECQRLLDSGEVEMF 174
I I+ ++D VLKK+ + G P L +G G L N+ RL D + +
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK-- 353
Query: 175 VGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-FCNFVREFGK 233
G + + + L + R+ CV L + + D+ +C+ + GK
Sbjct: 354 -GCNPDVVTYSTLITALGKAARVESACV------LFEEMESVGIQPDLFTYCSIITVLGK 406
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+ A R + + SP++ ++ G G + ++R I+ED++ + ++
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 294 FNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+++L+ ++ + K + + G D ++ L+ GN A E+ ++
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL---LQ 523
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+KG+ +Y+ ++ A A A ED+ G P+ +++SSLI+A
Sbjct: 524 FANSKGLWP-GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 412 GLVEQAMHLFEEMLQAG 428
G ++ A L EEM + G
Sbjct: 583 GQIDTAFELLEEMSKRG 599
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN +++ L++A +G E A + + ++ +PDVV+Y+ I R+ + + A
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ EM+ +PNL TY TL+ + G E + LA +D
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD 107
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 192/429 (44%), Gaps = 42/429 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+FG+ ++S + +K P++ ++D GD + A+ + + S+ +
Sbjct: 174 QFGEVDTVISEM------EKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKP 227
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ +NS++ + ++ EV++ M GV D+ S+N+L+ C AG A Y
Sbjct: 228 GLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFY 287
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E++ + DV ++S ++ +F A + +M G+ P+ + ++ +I
Sbjct: 288 KEMRGRR----VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT------- 460
AGL+ +A+ + +EM+ GC P+ N LL + + A L
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 461 -LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T + G DGN ++ ++ D S D+R +P TYN
Sbjct: 404 LCTFTTLIHGYCRDGNIEKA--LQFFDTIS----------------DQRL--RPDIVTYN 443
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C D + L ++M + + PNH++++ILID+ G V+ A L M
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+++ Y + IK RS + + +M+H ++ P+L+TY TL+ + G +HE
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 638 QQCLAVYQD 646
L + ++
Sbjct: 564 FNLLKIMEN 572
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 181/435 (41%), Gaps = 39/435 (8%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + + + +KG+ K + TY++++K W A +V M + GV P
Sbjct: 207 AGDVEAAMAL---IDSMVSKGI-KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI AG +E+A+ ++EM P+ + L+ + D A
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDR---ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
R R + L V G + + +D+ F
Sbjct: 323 REMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA------------------FG 364
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN L+ C + A L+NEM+ G+ P+ ++T LI GN+E AL
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
Q + + + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
G +V A +M G N +I+ +C + N ++G+ L + +
Sbjct: 485 CEKG---QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC----RSGNVSKGQQFLPKMRH 537
Query: 689 SQRPQSLLLEKVAVH 703
+ L+ +H
Sbjct: 538 DKVMPDLITYNTLIH 552
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 36/417 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G + K+R ++ + + V ++ FN L+ A +L+ L YK M+ V D+ S+
Sbjct: 243 GRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSF 302
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ L+ G A E E++ L D Y+ ++ F A AL+V++
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFG----LMPDGVIYTMVIGGFCRAGLMLEALRVRD 358
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M++ G P+ +T+++L+N + A L EM + G P+ L+
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
Query: 448 QFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP- 498
++A + F R ++ + G G+ + +N D S PN V
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK-ANELWDDMHSREIFPNHVTY 477
Query: 499 ----NSH--YSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+SH D F+F P TYN ++K C + + + + +MR
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ P+ I++ LI G + A +LKIM + + PD V Y I +++
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
A ++++M I+P+ TY++++ G+ ++ ++ +M + G +D +
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGN---SKKSFQLHDEMLQKGLAPDDKF 651
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + ++ AL+ +D P++ T+ID G+C GD K
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID--GMCRQGDLGK 457
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +++D+ S+ + N ++ L++ + + M G++ ++ +YN ++K
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +GN Q+ +++H + + D+ TY+T++ + A + + M +
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDK----VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V P+ +T++ +I+ + G +++A ++++M G EP+ ++ V A ++
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKS 633
Query: 453 FRL 455
F+L
Sbjct: 634 FQL 636
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/476 (18%), Positives = 189/476 (39%), Gaps = 84/476 (17%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
+R GR D V + ++ GVAP D F +L R +GE+E + + +
Sbjct: 240 LRNGRWDKAREVFRAMDACGVAP----DVRSFNMLIGGFCR---AGELEEALRFYKEMRG 292
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYA------CIVPRADILFCNFVREFGKKRDL 237
R+ ++ ++ L + +++ A Y ++P +++ + F + +
Sbjct: 293 RRV-TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG-VIYTMVIGGFCRAGLM 350
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFN 295
+ ALR D P++ T+++ G+C + S A + +++ + V ++ F
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLN--GLCKERRLSDAEELLNEMKERGVPPDLCTFT 408
Query: 296 SLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++ D ++ L+ + + + D+ +YN L+ C G+ A E++ ++
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E + + TYS ++ + A ++M++ G+ PN +T++S+I +G
Sbjct: 469 E----IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V + +M P+ N L+ V+ + AF L +
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKI--------------- 569
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
ME+++ Q P TYN+++ + V
Sbjct: 570 --------MENENVQ------------------------PDAVTYNMIISG-----FSVH 592
Query: 534 ALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
M E M G+ P+ ++ +I+ +GN + + Q+ M + G++PD
Sbjct: 593 GNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 22/385 (5%)
Query: 254 PNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN + ++I +CG+ G +++ + +++ + + +++YVF L++ + L E
Sbjct: 218 PNEFTYGSLIRGLCGV-GKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M G ++ + L+ CL GN +A+E++ + + K DV+TY+ +
Sbjct: 277 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI----GEWGFKRDVWTYNVFI 332
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A++V ++M GV PN +T++SLI+ AG V A + + M ++G
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ C ILL ++ + D+A LF S L D T I + +
Sbjct: 393 PDIVTCCILLDGLCKSKRLDQAILLFNQLVES----GLTPDVWSYTILIHGC--CTSRRM 446
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N + + H + P TY+ L+ C A L+NEM G P+
Sbjct: 447 GEAMNLLRDMHLKNL------VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I+++IL+DA +++ A+ + M + G+ PDV+ YT I +S+R+ +A +LF E
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560
Query: 609 MKHYQIQPNLVTYITLLRARSRYGS 633
M + P++VTY L A + GS
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGS 585
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 152/375 (40%), Gaps = 48/375 (12%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
S +I+ + + L+ N+++ VN LK LE + + G + SY IL+
Sbjct: 91 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLK-ALEFHDEIVNNGFSLNEVSYGILI 149
Query: 332 KACCLAGNTV----LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
C G L + I E + + +K +V YS ++ + +
Sbjct: 150 NGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYN 209
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA----- 442
+M+ GV PN T+ SLI G + L +EM++ G + + +L+
Sbjct: 210 EMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNG 269
Query: 443 -CVEACQ-FDRAF-RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
VEA + FD R + ++ T + G GN D +
Sbjct: 270 MLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL----------------- 312
Query: 500 SHYSSFDK--RFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWT 552
FD + FK TYN+ + C D RV +EM G+ PN +++
Sbjct: 313 -----FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV---FDEMCREGVVPNIVTYN 364
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G V GA +I+K M G++PD+V + +SKRL QA LF ++
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
Query: 613 QIQPNLVTYITLLRA 627
+ P++ +Y L+
Sbjct: 425 GLTPDVWSYTILIHG 439
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 22/326 (6%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ Y+I++ C G E Y E + GV + FTY ++++ +
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNE---MMGNGVCP-NEFTYGSLIRGLCGVGKF 236
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ ++M+ G+ + ++ LI+ G++ +A +F+EM+ G EPN C L
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL 296
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ D A LF A+GE N+ + + V
Sbjct: 297 MGGYCLKGNVDMARELFD---------AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV-- 345
Query: 500 SHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
FD+ R P TYN L+ C + ++ M GL+P+ ++ IL+
Sbjct: 346 ---RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 402
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D S ++ A+ + + E G++PDV +YT I C S+R+ +A +L +M +
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 462
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P++VTY L+ R G + + L
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLL 488
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 127/357 (35%), Gaps = 64/357 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ F+ ++ + K G D + N +LK C+ G + A E + E+ L+
Sbjct: 88 VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEI----VNNGFSLNEV 143
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAG--------VTPNTITWSSLINACANAGLVEQ 416
+Y ++ + A+ + + V N + +S +I+ G V++
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+ EM+ G PN L++ +F F L
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI---------------- 247
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
R + + +L+ C + V+A
Sbjct: 248 -------------------------------RRGLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ +EM G PN ++ T L+ GNV+ A ++ + E G DV Y I
Sbjct: 277 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYC 336
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R++ A +F+EM + PN+VTY +L+ + G EV + + M ++G
Sbjct: 337 KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG---EVSGAWEIVKTMHRSG 390
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F K Y+I++ C + + + NEM G+ PN ++ LI G G
Sbjct: 179 FFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLE 238
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
++ M G+ V +T I ++ L +A +F+EM + +PN+VT L+
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
G++ ++ ++ + + G+K + I +C+ G ++D
Sbjct: 299 GYCLKGNVDMARE---LFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRD 343
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 187/402 (46%), Gaps = 23/402 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
I T++D I G+ K +++ L+ T ++ + L+N + + LEV K M
Sbjct: 431 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 490
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I++ F
Sbjct: 491 EVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV----VKDGLKPDVVLYNNIIRAFCG 546
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +A+ +F+ M +GC P
Sbjct: 547 MGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHT 606
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE CQ ++A + +L+ N + + H S+ +T
Sbjct: 607 FNALILGLVEKCQMEKAVEILDEMSLAGISP--------NEHTYTTIMH-GYASLGDTGK 657
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
Y + K + TY L+KACC AL EM + + N + I
Sbjct: 658 AF---EYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNI 714
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A ++++ M+++G+ PD+ YT+ I C ++ +++A +EM+
Sbjct: 715 LIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL+ +R SL E + L +Q+M AG K +
Sbjct: 775 VKPNIKTYTTLIHGWAR-ASLPE--KALKCFQEMKSAGLKPD 813
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 187/448 (41%), Gaps = 69/448 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E +R++ + +V+ SL++ A D++ L + M++ G+ + +Y
Sbjct: 303 GDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 362
Query: 328 NILLKACCLAGN---------------TVLAQEIYGE-----------------VKHLEA 355
+IL+ + T L IYG V+ +E
Sbjct: 363 SILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEE 422
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G TP+ I++ LIN G V
Sbjct: 423 EGIDAPIDI--YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ V + AF +F K V L +
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 540
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFK-------- 512
GN DR + M+ + + T T F+P H S D R + +
Sbjct: 541 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRT--FMPIIHGFARSGDMRRALEIFDMMRWS 598
Query: 513 ---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA +++EM G+SPN ++T ++ G+ A
Sbjct: 599 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 658
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ ++ +G+ DV Y +K C +S R++ A ++ EM +I N Y L+
Sbjct: 659 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 718
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+R G + E + + Q M + G + +
Sbjct: 719 WARRGDVWEAAELM---QQMKQEGVQPD 743
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ A+R +K P II GD ++ I++
Sbjct: 535 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 594
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+ V ++ +E+ M G+ + +Y ++ G+
Sbjct: 595 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 654
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + ++K +G L+LDV+TY ++K + Q AL V +M S + NT
Sbjct: 655 TGKAFEYFTKLK---TEG-LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 710
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G V +A L ++M Q G +P+ + AC +A RA +
Sbjct: 711 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATK 765
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN + TI+ GD K+ + L+++ + L++Y + +L+ + ++ L
Sbjct: 636 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 695
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A E+ ++ ++ +GV + D+ TY++ +
Sbjct: 696 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL---MQQMKQEGV-QPDIHTYTSFI 751
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A K ++M GV PN T+++LI+ A A L E+A+ F+EM AG +
Sbjct: 752 NACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 811
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 812 PDKAVYHCLMTS 823
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 27/294 (9%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ ++ E + P+ + ++ A G + A FE M G EP S
Sbjct: 274 WQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTS 329
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPN 495
L+ A + A R +++L Y G +I++ E D
Sbjct: 330 LIHAYAVGRDMEEALSCVRKMKEEGIEMSL-VTYSILVGGFAKIADAEAAD--------- 379
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
H+ K Y ++ A C + + +AL+ EM G+ +
Sbjct: 380 -----HWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 434
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D GN E L + ++E G +P V++Y I + ++ ++ +A + + M+
Sbjct: 435 MMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 494
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
I+ N+ TY L+ R L + AV++D+ K G K + +I +C
Sbjct: 495 IKHNMKTYSMLINGFVR---LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFC 545
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 201/468 (42%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D A+R ++ + +P +I G G ++ A++E++
Sbjct: 259 LMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEI 318
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R +N+L+ V LK V M+K GV D +Y++L+ A AG
Sbjct: 319 RENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRW 378
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA V + + + YS I+ + D WQ + +V +DM S GV P+
Sbjct: 379 ESARIV---LKEMEASNV-EPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHF 434
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM FE ML G P++ N L+ ++ + + A LF
Sbjct: 435 YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELF---- 490
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GE M+ + + P TTYNI
Sbjct: 491 --------GE-----------MQQR------------------------GYSPCITTYNI 507
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
++ + + +V +++M++ GL PN I++T L+D G SG A++ L++++
Sbjct: 508 MINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 567
Query: 577 ---------------------------------DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+G++P ++A + I +R +AF
Sbjct: 568 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAF 627
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK I+P++VTY TL++A R + + Q+ AVY++M +G
Sbjct: 628 AVLQYMKENNIEPDVVTYTTLMKALIR---VEKFQKVPAVYEEMVTSG 672
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 45/429 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L+ A D++ L + M++ G D +Y+ +
Sbjct: 167 RSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 226
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ + ++ + Q++Y E++ +++D + I+ F+ A A++
Sbjct: 227 IQYLTRSNKIDSPILQKLYTEIE----TDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAM 282
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
S G+ P T ++I A N+G +A LFEE+ + G EP ++ N LL+ V+
Sbjct: 283 AQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGS 342
Query: 449 FDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + K V E Y D ++ + I N PNS+
Sbjct: 343 LKDA--EFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVY 400
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ A M
Sbjct: 401 SRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDH--AMATFERM 458
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LI+ SG A ++ M++ G SP + Y I +R
Sbjct: 459 LSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRW 518
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+Q +M+ + PN +TY TL+ + G + +CL V + G+K T
Sbjct: 519 EQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKS---TGFKPTSTMY 575
Query: 660 KELIEEWCE 668
LI + +
Sbjct: 576 NALINAYAQ 584
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++SQ + N + +L++V +F+ +E + ++ G YN L+ A G
Sbjct: 528 MQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 587
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ LA + + + +G L + ++++ F + + A V + M + P+ +
Sbjct: 588 SELAVNAF---RLMTTEG-LTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVV 643
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
T+++L+ A ++ ++EEM+ +GC P+ + +L A
Sbjct: 644 TYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 212/470 (45%), Gaps = 63/470 (13%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 339 N-----TVLAQ---------------------EIYGEVK------HLEAKGVLKLDVFTY 366
N +LAQ EI E K L+A G L TY
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG-LSPTAATY 309
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
IVK+F A AL + E+M GV+PN + ++ +++ A G A ++E+M+
Sbjct: 310 GCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 369
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG +P+ NIL+ A +A + D+A + + ++ + E Y D H
Sbjct: 370 AGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTI-ETYTSILDGYVKGGHIQ 428
Query: 487 KQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTV 542
K FD K +P +YN L+ A + +++EM
Sbjct: 429 KA-------------LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLAN 475
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN S+T L + +G+VE A + + M+++ ++ D+VAY +K C +S +++A
Sbjct: 476 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 535
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+F+++ ++ N +TY T+L +R G L + + L +DM K G+
Sbjct: 536 VEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL---KDMQKHGF 582
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 174/409 (42%), Gaps = 55/409 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + F + RD L + K SP I+ + G+ K+ I E++
Sbjct: 273 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 332
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V+ N ++ +M+ A FT +V+++M G+ D+ +YNIL+ A C AG
Sbjct: 333 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRM 392
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ G +++++A +L + TY++I+ + Q AL+V + + +AG+ P ++
Sbjct: 393 ---DKALGVLENIQANRLLPT-IETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVS 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++ A A +E A + +EML G PN + L + A ++AF +F+
Sbjct: 449 YNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQR-- 506
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +A+ Y
Sbjct: 507 MKKENLAI---------------------------------------------DIVAYGA 521
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KACC R + ++ GL N I++ ++D G + A +LK M++ G
Sbjct: 522 LLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHG 581
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D + YT+ IK C RS ++ M+ +++ N TY TL+
Sbjct: 582 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 630
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP Y +L+ A D +A MR + PN +T LI A + ++EGA+
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+ + + + I + + A FE+ K + P + Y ++++A
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ G++ V+ LA M + G++ N
Sbjct: 248 QAGNMETVEALLA---QMEEEGFQGN 270
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 45/413 (10%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
I T++D I G+ K +++ L+ T ++ + L+N + + LEV K M
Sbjct: 410 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 469
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I++ F
Sbjct: 470 EVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV----VKDGLKPDVVLYNNIIRAFCG 525
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +A+ +F+ M +GC P
Sbjct: 526 MGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHT 585
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE CQ ++A + +L+ IS EH T
Sbjct: 586 FNALILGLVEKCQMEKAVEILDEMSLAG---------------ISPNEH--------TYT 622
Query: 496 FVPNSHYSSFDKRFSFKPTTT-----------TYNILMKACCTDYYRVKAL--MNEMRTV 542
+ + + S D +F+ T TY L+KACC AL EM +
Sbjct: 623 TIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQ 682
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ N + ILID G+V A ++++ M+++G+ PD+ YT+ I C ++ +++A
Sbjct: 683 KIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRA 742
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+EM+ ++PN+ TY TL+ +R SL E + L +Q+M AG K +
Sbjct: 743 TKTIQEMEVVGVKPNIKTYTTLIHGWAR-ASLPE--KALKCFQEMKSAGLKPD 792
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 190/461 (41%), Gaps = 69/461 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E +R++ + +V+ SL++ A D++ L + M++ G+ + +Y
Sbjct: 282 GDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 341
Query: 328 NILLKACCLAGN---------------TVLAQEIYGE-----------------VKHLEA 355
+IL+ + T L IYG V+ +E
Sbjct: 342 SILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEE 401
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G TP+ I++ LIN G V
Sbjct: 402 EGIDAPIDI--YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ V + AF +F K V L +
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 519
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFK-------- 512
GN DR + M+ + + T T F+P H S D R + +
Sbjct: 520 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRT--FMPIIHGFARSGDMRRALEIFDMMRWS 577
Query: 513 ---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA +++EM G+SPN ++T ++ G+ A
Sbjct: 578 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 637
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ ++ +G+ DV Y +K C +S R++ A ++ EM +I N Y L+
Sbjct: 638 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 697
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+R G + E + + Q M + G + + I C+
Sbjct: 698 WARRGDVWEAAELM---QQMKQEGVQPDIHTYTSFINACCK 735
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ A+R +K P II GD ++ I++
Sbjct: 514 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 573
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+ V ++ +E+ M G+ + +Y ++ G+
Sbjct: 574 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 633
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + ++K +G L+LDV+TY ++K + Q AL V +M S + NT
Sbjct: 634 TGKAFEYFTKLK---TEG-LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 689
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
++ LI+ A G V +A L ++M Q G +P+ + AC +A RA
Sbjct: 690 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRA 742
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN + TI+ GD K+ + L+++ + L++Y + +L+ + ++ L
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A E+ ++ ++ +GV + D+ TY++ +
Sbjct: 675 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL---MQQMKQEGV-QPDIHTYTSFI 730
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A K ++M GV PN T+++LI+ A A L E+A+ F+EM AG +
Sbjct: 731 NACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 790
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 791 PDKAVYHCLMTS 802
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 27/294 (9%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ ++ E + P+ + ++ A G + A FE M G EP S
Sbjct: 253 WQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTS 308
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPN 495
L+ A + A R +++L Y G +I++ E D
Sbjct: 309 LIHAYAVGRDMEEALSCVRKMKEEGIEMSL-VTYSILVGGFAKIADAEAAD--------- 358
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
H+ K Y ++ A C + + +AL+ EM G+ +
Sbjct: 359 -----HWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 413
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D GN E L + ++E G +P V++Y I + ++ ++ +A + + M+
Sbjct: 414 MMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 473
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
I+ N+ TY L+ R L + AV++D+ K G K + +I +C
Sbjct: 474 IKHNMKTYSMLINGFVR---LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFC 524
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 170/403 (42%), Gaps = 58/403 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP + +I++ G K+ I ++ Q + N ++ +++ V D
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M G+ D +YNIL+ A C G A E+ ++ + L+ TY+ I+
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLR----TYTIII 482
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +MA + DM AG P+ T++ +++ A AG +++A + +EM+ AG
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L++ AF+ F +RI
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYF--------------------NRI----------- 571
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
K KP Y L+KACC A+ EM G+ N+
Sbjct: 572 ----------------KEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNN 615
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ IL+D G++ A I++ MR +G++PD+ +YT+ I C ++ + +A E+
Sbjct: 616 YIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQ 675
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
MK +QPNL Y TL+ + S ++ L Y +M AG
Sbjct: 676 MKQQGVQPNLQAYTTLIHG---WASASYPEKALICYDEMKSAG 715
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 44/449 (9%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
++R A I P + N + + +DL A+ + + SPN II G
Sbjct: 217 SMRAAGIEPNVHS-YTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRL 275
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD + ++ S+N N ++N++++ A +++ + M++ G+ A + Y
Sbjct: 276 GDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLY 335
Query: 328 NILLKAC--CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
N+L+ C A + L ++ +K G L V +Y ++ +++ AL++
Sbjct: 336 NMLMDGYVHCRAVDKCL--NVFRRLKARTETG-LSPTVVSYGCLINLYSKLGKMDKALQI 392
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+M G+ N T+S +I+ G A +FE+M AG +P+ NIL+ A +
Sbjct: 393 SNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCK 452
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q +RA L ++ ME D T + +
Sbjct: 453 NGQMNRALEL-----------------------LARMESGDCPPTLRTYTIIIDGFMKIG 489
Query: 506 DKRFS-----------FKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
D R + F+P+ TYN++M A R ++++EM G+ PN S+T
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYT 549
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI+ G++ A + ++E G+ PDV+AY + +K C ++ R++ ++ EM
Sbjct: 550 TLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAA 609
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ N Y LL ++ G + E +
Sbjct: 610 GVPMNNYIYNILLDGWAQRGDMWEASDIM 638
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 203/513 (39%), Gaps = 119/513 (23%)
Query: 224 FCNFVREFGKK-RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F N V + K R +V A K + P +++ G GD +RA +E +
Sbjct: 166 FRNLVEDHPKDARKVVDAF-------KRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESM 218
Query: 283 RSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R+ + N++ + +L++ A DL+ + + M+ GV + A+Y++++
Sbjct: 219 RAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISG------- 271
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
YG + +EA +W+Q AL S N +
Sbjct: 272 ------YGRLGDVEAA-------------------ERWFQRAL-------SENWHHNDVI 299
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++I+A AG +E+A + M + G E N+L+ V D+ +FR
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 461 ------LSKTQVALG---EDYD--GNTDR---ISN-MEHKDKQSITNTPNFVPNSHYSSF 505
LS T V+ G Y G D+ ISN ME + + T + + + +
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Query: 506 DKRFSF-----------KPTTTTYNILMKACCTDYYRVKAL------------------- 535
D +F KP TYNILM A C + +AL
Sbjct: 420 DTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYT 479
Query: 536 ------------------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ +M+ G P+ ++ +++ +G ++ A I+ M
Sbjct: 480 IIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVA 539
Query: 578 GMSPDVVAYTTAIK--VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P+ +YTT I+ C+ L AF F +K ++P+++ Y +LL+A + G +
Sbjct: 540 GVHPNERSYTTLIEGYACIGDMGL--AFKYFNRIKEVGLKPDVIAYASLLKACCKAGRM- 596
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Q LA+ +M AG N+ L++ W +
Sbjct: 597 --QSTLAITAEMAAAGVPMNNYIYNILLDGWAQ 627
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ GD + + ++ + ++ + SL+ A ++ TL +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M GV + YNILL G+ A +I +++H +G L D+ +Y++ +
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRH---EG-LTPDIHSYTSFIN 658
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + E M GV PN +++LI+ A+A E+A+ ++EM AG P
Sbjct: 659 ACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIP 718
Query: 432 N 432
+
Sbjct: 719 D 719
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 65/400 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+++ ++I G G K+ I+E ++ N+ V+N++++ D L ++
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIF 213
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + G+ D ++N L+ A A I+ E +E +G+ + DV TY+T++
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE---MEERGIARDDV-TYNTLIAT 269
Query: 373 FADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + E M S+G+ P+ IT+S++I+ A GL +A+ LF+EM EP
Sbjct: 270 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ C N ++ FD A + R+ ME
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRA-----------------------MEEA------ 360
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
F TYN L+ + + +L+ EM+ G SPN +
Sbjct: 361 ------------------GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 402
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ LIDA G A+ + + +++ G+ PDVV Y+T + C ++ +A +L EEM
Sbjct: 403 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 462
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I+PN++TY +LL A R QCL V ++ K
Sbjct: 463 ADNGIRPNVITYNSLLDAYGR--------QCLMVRKNFPK 494
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF YS+++ + + A+++ E M PN + ++++I+AC+ G A+ +F
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 213
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EML+ G P+ N L+ A A +++ R+F + + +A +D NT I+
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE--MEERGIAR-DDVTYNT-LIAT 269
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM 539
+ + + + K +P+ TY+ ++ A + AL EM
Sbjct: 270 YCRGGQMHLGA-------ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 322
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R + P+ I + ++D GN + A I + M E G + D+V Y + + +
Sbjct: 323 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 382
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A SL EEMK PN++TY L+ A ++G H + +A++QD+ KAG + +
Sbjct: 383 REAMSLLEEMKQRGASPNILTYSALIDAYCKHG-FH--RDAMALFQDVKKAGLQPDVVLY 439
Query: 660 KELIEEWCEGVIQDK 674
L++ C+ D+
Sbjct: 440 STLVDGCCKNGSPDE 454
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 188/465 (40%), Gaps = 96/465 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++ + + +G+ L A+ ++A K + PN+ + +ID C GDY + I+ +
Sbjct: 157 FVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIFRE 215
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q ++ + FN+L++ A+ + ++ M++ G+ D +YN L+ C G
Sbjct: 216 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ 275
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L + ++ + ++ V TYST++ +A A+ + ++M + V P+ I
Sbjct: 276 MHLGAAL---METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 332
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++ A G ++A + M +AG + N LL + + +F A L
Sbjct: 333 CYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLE-- 390
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
E K + + P TY+
Sbjct: 391 -----------------------EMKQRGA----------------------SPNILTYS 405
Query: 520 ILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A C + AL +++ GL P+ + ++ L+D C +G+ + AL +L+ M ++
Sbjct: 406 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 465
Query: 578 GMSPDVVAYTTAIKVCVR------------------------------------SKRLKQ 601
G+ P+V+ Y + + R + KQ
Sbjct: 466 GIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQ 525
Query: 602 AFSL-----FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A L F EM ++PN+VT+ ++L A S S+ + L
Sbjct: 526 ALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLL 570
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 54/399 (13%)
Query: 217 VPRADILFCNFVREF--GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ R D+ + + + G + L +AL A + P++ T+ID G +
Sbjct: 256 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE-PSVITYSTMIDGYAKLGLAHE 314
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ A+++++R+QNV + +N++++++A F + + M++ G D+ +YN LL
Sbjct: 315 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 374
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ G A + E+K A ++ TYS ++ + + + A+ + +D+ A
Sbjct: 375 SYGKQGKFREAMSLLEEMKQRGASP----NILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ + +S+L++ C G ++A+ L EEM G PN N LL A C R
Sbjct: 431 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRK 490
Query: 453 -FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F R + L + + L D D+ S ++ K KQ++
Sbjct: 491 NFPKLRFFLLPRVTMLLKPSVD--YDQQSLVDPKQKQAL--------------------- 527
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+L A + EM G+ PN ++++ +++AC +VE A +L
Sbjct: 528 --------VLAAA---------RVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLL 570
Query: 572 KIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ MR DG V T + + R + + A +LF E+
Sbjct: 571 EAMRVFDGR---VYGVTHGLLMGFRIRVWRDAETLFNEL 606
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
K T+T + L + +D+ ++ + + G N ++ LI A G SG + A++I
Sbjct: 122 KVTSTIISSLGRLGRSDWAQL--IFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF 179
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ P++V Y I C + A +F EM + P+ +T+ TL+ A R
Sbjct: 180 EAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGR- 237
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ ++C ++ +M + G +D LI +C G
Sbjct: 238 --ANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 273
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 136/550 (24%), Positives = 225/550 (40%), Gaps = 72/550 (13%)
Query: 213 YACIVPRADILFC---NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+A VPR + +C N +E GK + L ++ PN T+I C
Sbjct: 259 FANDVPRDEYTYCAAMNACKEAGKWMQAAAFLPRM---REDGVPPNTIAYNTVIGACAFF 315
Query: 270 GDYMKS----RAIYEDLRSQNVTLNIYVFNSLMNVNAHDL-KFTLEVYKNMQKLGVMADM 324
G K+ R LR + N S A D F L + + M++ GV D+
Sbjct: 316 GRPNKAWNNNRETSSFLRPTSTRENKGRGLSPAQAEASDAGDFALGLMEEMKREGVEPDI 375
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+Y L+ A L+ + +I E+ AK LK + TY + ++ + D W+ A
Sbjct: 376 ITYGSLMSA--LSPRGLAGADIVLELFETLAKSGLKPNSITYVSAIRAYGDKGDWERA-- 431
Query: 385 VKEDMLSA-----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
E ML GV PN +S+++ A AN G ++A+ +EM + G +
Sbjct: 432 --EQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMRECGLSADPVVYTAA 489
Query: 440 LQACVEACQFDRAFRLF----------RS--WTLSKTQVALGE--DYDGNTDRISNMEHK 485
+ AC + Q+++A RS W + ALG+ +G D ++ M
Sbjct: 490 IGACEKFGQWEKALDTLSKLVSEKPPMRSLMWGYNAAISALGKAKQMEGIKDLVATM--- 546
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
K KP TY +M+A D + +++ EM G
Sbjct: 547 ---------------------KASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAG 585
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ PN + + LI + +E A IL MRE G+ PDV YTT + C R ++A
Sbjct: 586 VRPNRVVYNTLIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAE 645
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+L EM+ + ++PN T +L+ YG EV++ LA+++ Y A+ + +
Sbjct: 646 ALLSEMESFGVKPNSRTLTAVLKV---YGDAGEVERALALFEQ-----YDASGMVMDVIC 697
Query: 664 EEWCEGVIQDKNQNQGEVTLCRRTNSQ--RPQSLLLEKVAVHLQKSAAENLAIDLRGLTK 721
G + K+ + + L R S+ P SL + V +++ A A L +
Sbjct: 698 FNTLMGPVLKKDDPETVLELFSRMESRGVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMR 757
Query: 722 VEARIIVLAV 731
E +I + V
Sbjct: 758 EEGGVIAMQV 767
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 148/370 (40%), Gaps = 40/370 (10%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N L+ A + EV + ++ G+ D +Y ++K + + +
Sbjct: 160 VFTYNLLIAALARSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVL 219
Query: 348 GEVKHLEAKGVLKLDV-FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ K LE +G LD+ YS +V +A W+ A + ++M + V + T+ + +N
Sbjct: 220 EDAK-LELEG---LDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMN 275
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF--RLFRSWTLSKT 464
AC AG QA M + G PN+ N ++ AC AF R ++W ++
Sbjct: 276 ACKEAGKWMQAAAFLPRMREDGVPPNTIAYNTVIGAC--------AFFGRPNKAWNNNRE 327
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-------KRFSFKPTTTT 517
+ + ++ + +P S F KR +P T
Sbjct: 328 TSSF----------LRPTSTRENKGRGLSPAQAEASDAGDFALGLMEEMKREGVEPDIIT 377
Query: 518 YNILMKACCTDYYR----VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y LM A V L + GL PN I++ I A G G+ E A Q+L
Sbjct: 378 YGSLMSALSPRGLAGADIVLELFETLAKSGLKPNSITYVSAIRAYGDKGDWERAEQMLVG 437
Query: 574 M-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +E G+ P+ Y+ +K + K+A +EM+ + + V Y + A ++G
Sbjct: 438 MQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMRECGLSADPVVYTAAIGACEKFG 497
Query: 633 SLHEVQQCLA 642
+ L+
Sbjct: 498 QWEKALDTLS 507
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/296 (18%), Positives = 99/296 (33%), Gaps = 47/296 (15%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V +++ G N T+ + A G +A+ EEM AG ++ C + AC
Sbjct: 21 RVMQELRDEGAEFNLRTYRGCLAFLAKGGRGREALMYLEEMESAGVAADNACLGHVATAC 80
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGED------YDGNTDRISNMEHKDKQSITNTPNFV 497
D A + R VA + +G + T N
Sbjct: 81 ARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSSRSSFRRTALSNME 140
Query: 498 PNSHYSSFD--KRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWT 552
+ + PT TYN+L+ A + V L+++MR G+ P+ ++
Sbjct: 141 CEAAVGLLGEMQACGAHPTVFTYNLLIAALARSRRPHSEVLNLLDQMRCDGIKPDSYTYV 200
Query: 553 ILIDACGG------------------------------------SGNVEGALQILKIMRE 576
++ G G+ E A ++ M
Sbjct: 201 GVVKGIQGPKKNAMMRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFA 260
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + D Y A+ C + + QA + M+ + PN + Y T++ A + +G
Sbjct: 261 NDVPRDEYTYCAAMNACKEAGKWMQAAAFLPRMREDGVPPNTIAYNTVIGACAFFG 316
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 65/394 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+++ ++I G G K+ I+E ++ N+ V+N++++ D L ++
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIF 212
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + G+ D ++N L+ A A I+ E +E +G+ + DV TY+T++
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE---MEERGIARDDV-TYNTLIAT 268
Query: 373 FADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + E M S+G+ P+ IT+S++I+ A GL +A+ LF+EM EP
Sbjct: 269 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 328
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ C N ++ FD A + R+ ME
Sbjct: 329 DGICYNTMVDIHARLGNFDEAHSIRRA-----------------------MEEA------ 359
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
F TYN L+ + + +L+ EM+ G SPN +
Sbjct: 360 ------------------GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 401
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ LIDA G A+ + + +++ G+ PDVV Y+T + C ++ +A +L EEM
Sbjct: 402 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 461
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
I+PN++TY +LL A R QCL V
Sbjct: 462 ADNGIRPNVITYNSLLDAYGR--------QCLMV 487
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF YS+++ + + A+++ E M PN + ++++I+AC+ G A+ +F
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 212
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EML+ G P+ N L+ A A +++ R+F + + +A +D NT I+
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE--MEERGIAR-DDVTYNT-LIAT 268
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM 539
+ + + + K +P+ TY+ ++ A + AL EM
Sbjct: 269 YCRGGQMHLGA-------ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 321
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R + P+ I + ++D GN + A I + M E G + D+V Y + + +
Sbjct: 322 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 381
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A SL EEMK PN++TY L+ A ++G H + +A++QD+ KAG + +
Sbjct: 382 REAMSLLEEMKQRGASPNILTYSALIDAYCKHG-FH--RDAMALFQDVKKAGLQPDVVLY 438
Query: 660 KELIEEWCEGVIQDK 674
L++ C+ D+
Sbjct: 439 STLVDGCCKNGSPDE 453
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 188/465 (40%), Gaps = 96/465 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++ + + +G+ L A+ ++A K + PN+ + +ID C GDY + I+ +
Sbjct: 156 FVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIFRE 214
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q ++ + FN+L++ A+ + ++ M++ G+ D +YN L+ C G
Sbjct: 215 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ 274
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L + ++ + ++ V TYST++ +A A+ + ++M + V P+ I
Sbjct: 275 MHLGAAL---METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 331
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++ A G ++A + M +AG + N LL + + +F A L
Sbjct: 332 CYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLE-- 389
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
E K + + P TY+
Sbjct: 390 -----------------------EMKQRGA----------------------SPNILTYS 404
Query: 520 ILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A C + AL +++ GL P+ + ++ L+D C +G+ + AL +L+ M ++
Sbjct: 405 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 464
Query: 578 GMSPDVVAYTTAIKVCVR------------------------------------SKRLKQ 601
G+ P+V+ Y + + R + KQ
Sbjct: 465 GIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQ 524
Query: 602 AFSL-----FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A L F EM ++PN+VT+ ++L A S S+ + L
Sbjct: 525 ALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLL 569
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 175/399 (43%), Gaps = 54/399 (13%)
Query: 217 VPRADILFCNFVREF--GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ R D+ + + + G + L +AL A + P++ T+ID G +
Sbjct: 255 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE-PSVITYSTMIDGYAKLGLAHE 313
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ A+++++R+QNV + +N++++++A F + + M++ G D+ +YN LL
Sbjct: 314 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 373
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ G A + E+K A ++ TYS ++ + + + A+ + +D+ A
Sbjct: 374 SYGKQGKFREAMSLLEEMKQRGASP----NILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR- 451
G+ P+ + +S+L++ C G ++A+ L EEM G PN N LL A C R
Sbjct: 430 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRK 489
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F R + L + + L D+ S ++ K KQ++
Sbjct: 490 TFPKLRFFLLPRVTMLLKPSM--QDDQQSLVDPKQKQAL--------------------- 526
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+L A + EM G+ PN ++++ +++AC +VE A +L
Sbjct: 527 --------VLAAA---------RVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLL 569
Query: 572 KIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ MR DG V T + + R + + A +LF E+
Sbjct: 570 EAMRVFDGR---VYGVTHGLLMGFRIRVWRDAETLFNEL 605
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
K T+T + L + +D+ ++ + + G N ++ LI A G SG + A++I
Sbjct: 121 KVTSTIISSLGRLGRSDWAQL--IFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF 178
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ P++V Y I C + A +F EM + P+ +T+ TL+ A R
Sbjct: 179 EAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 237
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
E C ++ +M + G +D LI +C G
Sbjct: 238 NRWEE---CDRIFAEMEERGIARDDVTYNTLIATYCRG 272
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 37/423 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++Y ++ + G ++ D+ + V +I +N L N L +K
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-GFRILGLISGAWK 361
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Q++ G+ D+ +Y IL+ C GN +E + + + ++G LKL + TY+ ++
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNI---EESFKLKEKMLSQG-LKLSIVTYTVLL 417
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A+ + +M G+ P+ +T+S LI+ G VE+A+ L+EEM
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-------LGEDYDGNTDRISNME 483
PNS C+ ++ E A F S T K+ VA + D I
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVT--KSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 484 HKDKQSITN--TPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
KQ I +P V NS F K+ PT+ TY LM
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C D + + +++EM + P I++T+++ G + ++Q+LK M G+ PD
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y T I+ ++ L++AF L +M + +QP+ VTY L+ YG+L + + L
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715
Query: 644 YQD 646
QD
Sbjct: 716 LQD 718
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 190/454 (41%), Gaps = 53/454 (11%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D+ SYNILL C+AG+ A E + +E GV + D+ TY+ + F
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND---MENHGV-EPDIVTYNILANGFR 351
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T++ LI G +E++ L E+ML G + +
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY-------DGNTDRISNMEHKDK 487
+LL + ++ + D A L + + L D G R + E +
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEV----IGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467
Query: 488 QSITNTPNFVPNSHYSS------FDK------RFSFKPTTTT--------YNILMKACCT 527
+ PNS S F+K + F T + YNI++
Sbjct: 468 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG--- 524
Query: 528 DYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
Y ++ + +R+ G+SP +++ LI G + A+++L ++ G+ P
Sbjct: 525 -YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YTT + + F + EM+ I+P +TY +++ + G LHE Q L
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGV-IQDKNQNQGEVTLCRRTNSQRPQSLLLEKV 700
+ M+ G + +I+ +C+ +Q Q ++ S ++L+ +
Sbjct: 644 ---KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700
Query: 701 AVHLQKSAAENLAIDLRG----LTKVEARIIVLA 730
V+ A+ L + L+ LTKV I+ A
Sbjct: 701 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 734
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 144/352 (40%), Gaps = 72/352 (20%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
HD F L M+ L + +A+YN LL +T + ++Y E+K A GV + +
Sbjct: 185 HDALFVL---AKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIK---ASGVPQ-N 234
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+T ++ Q A+ + P+ +++++L++ G V+ A F
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M++ G P+ NILL A + A ++M
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF-----------------------TNDM 331
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN----- 537
E+ +P TYNIL +R+ L++
Sbjct: 332 ENH------------------------GVEPDIVTYNILANG-----FRILGLISGAWKV 362
Query: 538 --EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M GL+P+ +++TILI GN+E + ++ + M G+ +V YT + +
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S R+ +A L EM+ ++P+L+TY L+ + G+ V++ + +Y++M
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA---VEEAIELYEEM 471
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/403 (18%), Positives = 158/403 (39%), Gaps = 60/403 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
PN ++C II G +++ ++ + +V I ++N +++ A ++ +
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
YK + + G+ + ++N L+ C G A ++ +K G++ V TY+T++
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK---VHGLVPTSV-TYTTLMN 593
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + +M + + P IT++ ++ G + +++ L + M G P
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N ++Q+ +A +AF+L ++H
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQM----------------------LQH------- 684
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNH 548
S +P+ TYN+L+ C Y +K L+ ++ +
Sbjct: 685 ------------------SLQPSPVTYNVLINGLCV-YGNLKDADRLLVTLQDQSIRLTK 725
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T +I A G+V+ AL M E G + Y+ I + + A F
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M + I P+ + +L A R G + V + A+ M K G
Sbjct: 786 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM---MIKCG 825
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P+ ++N LM C K+ M GL P+ S+ IL+ +G++E AL
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ M G+ PD+V Y + A+ + + M + P+LVTY L+
Sbjct: 326 EFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGH 385
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G+ +++ + + M G K + L+ C+
Sbjct: 386 CQMGN---IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 32/334 (9%)
Query: 330 LLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++K C T +A+ ++ + K L K LK+ Y+ ++ F + ++A + E+
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV----YNLLIDGFLEVHNVEVAWNLFEE 815
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M SAG P+T T++SLI+A +G + + L++EML GC+PN+ N+++ V++ +
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 449 FDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYS 503
D+A L+ S S T G DG + R+ + F HY
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEM----------FDGMVHYG 925
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
+P + YNIL+ + A M G+ P+ S+TIL+D +
Sbjct: 926 C-------RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V+ AL + +++ G+ PD+VAY I RS+R ++A SLF EM++ I P+L TY
Sbjct: 979 GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+L+ G + E + +Y+++ G K N
Sbjct: 1039 NSLILNLGIVGMIEEAGK---IYEELQFIGLKPN 1069
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 180/409 (44%), Gaps = 49/409 (11%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKA 333
+ E++ S + NIY + + V D K E Y+ M+++ G D+ +Y +L+ A
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKID-EAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A A ++ ++K K D TY T++ F+D K+ +M + G
Sbjct: 309 LCTARKLDDAMCLFTKMKSSSHKP----DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ +T++ L+NA AG + +A L + M + G PN N L+ + A + D A
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424
Query: 454 RLF---RSWTLSKTQVA--LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + T L DY G + P +F+K
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGH-------------------PGKALETFEK- 464
Query: 509 FSFKPTTTTYNILMKACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACG 559
K NI+ AC Y + KA+ NE+++ GL+P+ +++ +++
Sbjct: 465 --MKARGIAPNIV--ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G V+ A+++L M + PDV+ + I ++ R+++A+ +F M+ + P +V
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVV 580
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY LL + G ++Q+ + +++ M G N L++ C+
Sbjct: 581 TYNILLAGLGKEG---QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCK 626
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 209/493 (42%), Gaps = 40/493 (8%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
R L A+ + K P+ T++D CG K I+ ++ + ++ F
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
L+N A + ++ M+K GV+ ++ +YN L+ A A +++ +
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF---SN 429
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ GV + +TY ++ + AL+ E M + G+ PN + ++ + + A G
Sbjct: 430 MESLGV-EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A +F E+ +G P+S N++++ + Q D A +L +SK Q D
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE--MSKVQCE--PDV 544
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
I + + + F + + PT TYNIL+ +
Sbjct: 545 IVINSLIDTLYKAGRVE----------EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KA L M G SPN I++ L+D + V+ AL++ M PDV+ + T
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ ++K A LF +MK ++P+ VT TLL + G +++ + +D +
Sbjct: 655 IIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSG---QIEDAFRITEDFF 710
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDKNQNQ----GEVTLCRRTNSQRPQSLLLEKVAV-- 702
Y+ + E+ G++ + + GE +CR + S+L+ + V
Sbjct: 711 ---YQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAI--CKDDSVLIPIIKVLC 765
Query: 703 -HLQKSAAENLAI 714
H + S A N+ +
Sbjct: 766 KHKKTSVARNVFV 778
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 27/350 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQ+ + ++ +Y I+ K+ + G L Q K EA VL + ++Y+ ++
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGG--LRQAPSALEKMREAGFVL--NAYSYNGLI 201
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + AL+V M+S G+ P+ T+S+L+ A ++ M L EEM G
Sbjct: 202 HFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLR 261
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDK 487
PN I ++ + D A+R+ + G D Y D + D
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRM----DDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLS 545
T K S KP TY L+ + C +V+ + EM G +
Sbjct: 318 AMCLFTKM-----------KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++TIL++A +G + A +L MR+ G+ P++ Y T I +R+ RL A L
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
F M+ ++P TYI L+ + G + L ++ M G N
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSG---HPGKALETFEKMKARGIAPN 473
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 153/374 (40%), Gaps = 58/374 (15%)
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L++ + H+++ +++ M+ G D +YN L+ A G + E++
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA---HGKSGKINELFDLY 848
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +G K + TY+ ++ + A+ + +++S +P T+ LI+
Sbjct: 849 DEMLTRGC-KPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+G ++ A +F+ M+ GC PNS NIL+ + D A F+
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV---------- 957
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
K+ I +P +Y IL+ C
Sbjct: 958 ----------------KEGI---------------------RPDLKSYTILVDILCIAGR 980
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL +++ GL P+ +++ ++I+ G S E AL + M+ G+ PD+ Y +
Sbjct: 981 VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I +++A ++EE++ ++PN+ TY L+R + G+ + +Y+ M
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN---SELAYGIYKKMM 1097
Query: 649 KAGYKANDTYLKEL 662
G N +L
Sbjct: 1098 VGGCDPNTGTFAQL 1111
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP+ T++ LM A + V L+ EM ++GL PN ++TI I G G ++ A
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I+K M +DG PDVV YT I +++L A LF +MK +P+ VTY+TLL
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S G L +V++ ++ +M GY + L+ C+
Sbjct: 344 FSDCGHLDKVEK---IWTEMEADGYAPDVVTFTILVNALCK 381
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 170/424 (40%), Gaps = 44/424 (10%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK AL ++ K +PN+ C + G +++A++ +L+S + +
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 292 YVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N +M + + +++ M K+ D+ N L+ AG A +++
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + L V TY+ ++ Q A+++ E M G +PNTIT+++L++
Sbjct: 570 MEEMN----LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLC 625
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--LSKTQVA 467
V+ A+ +F +M C P+ N ++ ++ Q A LF L V
Sbjct: 626 KNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVT 685
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-------------SFKPT 514
L G I + + +D IT + S+ D+ F + K
Sbjct: 686 LCTLLPG---VIKSGQIEDAFRITEDFFYQVG---SNIDRSFWEDVMGGILTEAGTEKAI 739
Query: 515 TTTYNILMKACCTD----YYRVKALMNEMRT-------------VGLSPNHISWTILIDA 557
++ +A C D +K L +T +G+ P + +LID
Sbjct: 740 LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
NVE A + + M+ G +PD Y + I +S ++ + F L++EM +PN
Sbjct: 800 FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859
Query: 618 LVTY 621
+TY
Sbjct: 860 TITY 863
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY---------MKSRAIYEDLR 283
K L A +D + PN I +++ G G M I DL+
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
S + ++I A + L ++ +++ G+ D+ +YN+++ + T A
Sbjct: 967 SYTILVDILCI-------AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEA 1019
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ E+++ +G++ D++TY++++ + A K+ E++ G+ PN T+++
Sbjct: 1020 LSLFHEMQN---RGIVP-DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNS 433
LI +G E A ++++M+ GC+PN+
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNT 1105
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/351 (18%), Positives = 134/351 (38%), Gaps = 55/351 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A ++ K +P+ + ++ID G G + +Y+++ ++ N +N +++
Sbjct: 809 AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V ++ L +++Y N+ ++ L+ +G A E++ + H +
Sbjct: 869 NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ Y+ +V + A + + M+ G+ P+ +++ L++ AG V+ A
Sbjct: 929 ----NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+H FE++ QAG +P+ N+++ + + + A LF
Sbjct: 985 LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE------------------- 1025
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYRVKAL 535
M+++ P TYN IL +
Sbjct: 1026 ----MQNR------------------------GIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
E++ +GL PN ++ LI SGN E A I K M G P+ +
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ Y C P + I + V +GK + +A + K P++ ++D+ I G
Sbjct: 922 VHYGC-RPNSAI-YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYN 328
+ +E L+ + ++ +N ++N + + L ++ MQ G++ D+ +YN
Sbjct: 980 RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ + G A +IY E++ + LK +VFTY+ +++ + + ++A + +
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIG----LKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095
Query: 389 MLSAGVTPNTITWSSLIN 406
M+ G PNT T++ L N
Sbjct: 1096 MMVGGCDPNTGTFAQLPN 1113
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + GL P+ +++ L+ A G N++ + +L+ M G+ P++ YT I+V R +
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A+ + + M P++VTY L+ A + ++ + ++ M + +K +
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALC---TARKLDDAMCLFTKMKSSSHKPDKVT 336
Query: 659 LKELIEEWCE 668
L++++ +
Sbjct: 337 YVTLLDKFSD 346
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 36/287 (12%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+ + T+ST++ + ++A + +ML AG+TP+ +SLINA A AG +QA+
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F++M + G P+ N L+ AC A DRA ++F + Q L N
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLS----QAGLSP----NDRT 236
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
S + H SH D+ FS+ +P TY+ L+ AC
Sbjct: 237 FSALIH---------------SHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGR 281
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A ++EM G+ PN ++WT LIDACG +E + ++ K MRE G P+ V
Sbjct: 282 AGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVT 341
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + C+++ L AF++ E M I+P VTY +LL +R G
Sbjct: 342 CSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLG 388
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 158/377 (41%), Gaps = 57/377 (15%)
Query: 201 CVNKPDVNLAIRYACIVPR-ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYI 258
C+++ + LA A P+ + CN F+R G + + AY+A P +
Sbjct: 72 CMSRRRLKLAAATAAASPKQGGVPACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVT 131
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ 316
T+I G C + + ++ +T ++ NSL+N A L+V+ M
Sbjct: 132 FSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMS 191
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ GV + ++N L+ AC AG+ A++++ L G+ D T+S ++ A
Sbjct: 192 RYGVTPSVITFNTLIDACGRAGDIDRARQVF---SRLSQAGLSPND-RTFSALIHSHAVQ 247
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A ++M + G+ PN +T+S+LINAC AG + +A +EM G EPN
Sbjct: 248 GQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTW 307
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ AC + + + +F+LF+ E +++ ++ PN
Sbjct: 308 TTLIDACGKGKELEWSFKLFK-------------------------EMRERGTV---PNG 339
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTIL 554
V T + LM AC + A++ M VG+ P +++T L
Sbjct: 340 V-------------------TCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSL 380
Query: 555 IDACGGSGNVEGALQIL 571
+ C G + A +L
Sbjct: 381 LTQCARLGQADRAGIVL 397
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
N KA D + + ++M G++P+ I++ LIDACG +G+++ A Q+ + + G
Sbjct: 172 NAFAKAGSPD--QALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAG 229
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+SP+ ++ I ++ +AFS +EM+ ++PN VTY L+ A R G L
Sbjct: 230 LSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAF 289
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
Q L +M+ G + N LI+ +G
Sbjct: 290 QTL---DEMFGTGIEPNVVTWTTLIDACGKG 317
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P ++++ LI G V A + + M E G++PDV A + I ++ QA
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+F++M Y + P+++T+ TL+ A R G + +Q V+ + +AG ND LI
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQ---VFSRLSQAGLSPNDRTFSALI 241
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 511 FKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+PT T++ L+ C + EM G++P+ + LI+A +G+ + AL
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M G++P V+ + T I C R+ + +A +F + + PN T+ L+ +
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSH 244
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G +V + + Q+M G + N LI
Sbjct: 245 AVQG---QVDEAFSWLQEMRARGLEPNRVTYSALI 276
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED----GMSPDV 583
+ +RV + EMR+ G+ P+ ++ L++ C G + AL ++++M +D G+ PD
Sbjct: 874 NLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDA 933
Query: 584 VAYTTAIKVCVRS--KRLKQAFSLFEEMK----HYQI--QPNLVTYITLLRA 627
V YT+ IK R+ R+++A +F M+ H+ +P VTY L+RA
Sbjct: 934 VTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRA 985
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP--NHISWTILIDACGGSGNVEGAL 568
P T+ +L+ A T KA LM R G N ++++ L+ ACG + + A
Sbjct: 575 PDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAF 634
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+I++ MRE G+ P Y ++VC S+ K A +FE M+ ++P + +Y +LL+A
Sbjct: 635 RIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAI 694
Query: 629 SRYGSLH 635
S +L
Sbjct: 695 SEENTLR 701
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + GE +G +++ S ++++F A A KV E M+ +P+
Sbjct: 517 GGATTGEGGSGETATARGRGAWRMNRKLESDLLQLFGQADQVDAAFKVLEGMVERRDSPD 576
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEACQFDRAFRL 455
TW L+NA AG +++A+ L E G E N + LL AC A + RAFR+
Sbjct: 577 GETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRI 636
Query: 456 FRS 458
+S
Sbjct: 637 VQS 639
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F+EM G P+ + N L+ C + +FDRA + R L D T I
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 480 SNMEH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYR 531
++ + I T N H+S+F +PT TY LM+A DY R
Sbjct: 941 KAAARAVPPRVEEAEEIFATMQQRTN-HFSTF-----ARPTEVTYAHLMRASVMAEDYGR 994
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + + G++P S + ACGG+G+V+ ALQ+ +MRE G+ P+ A +
Sbjct: 995 ALEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVN 1054
Query: 592 VC 593
+C
Sbjct: 1055 LC 1056
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV--VAYTTAIKVCVRSKRLKQA 602
SP+ +W +L++A +G ++ A+++++ R +G ++ + Y+ + C R+K+L +A
Sbjct: 574 SPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARA 633
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA-RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
F + + M+ ++P TY+ L+ R S V+ A+ + + G ++ + LK
Sbjct: 634 FRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKA 693
Query: 662 LIEE 665
+ EE
Sbjct: 694 ISEE 697
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM----QKLGVMADMASYNILL 331
+++++RS+ V ++ +N+L+N A +F L V + M + G+ D +Y L+
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 332 KACCLAGNTVL--AQEIYGEVK----HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
KA A + A+EI+ ++ H + TY+ +++ A+ + AL++
Sbjct: 941 KAAARAVPPRVEEAEEIFATMQQRTNHFST--FARPTEVTYAHLMRASVMAEDYGRALEI 998
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
LSAGV P + + + AC AG V+ A+ +++ M + G PNS+ L+ C
Sbjct: 999 WRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRA 1058
Query: 446 ACQFDRAFRLFRSWTLS-------KTQVALGEDYDGNTDRISNMEHKD 486
A R+ R + + ++ V++ + G+T R N ++
Sbjct: 1059 NGLQSVAARIMRERSKTDATTNRRRSNVSMRRNSAGSTSRKRNKSTRN 1106
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 44/462 (9%)
Query: 237 LVSALRAYD-------ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
L+ A R YD + +K + + + T+I + G K+ +
Sbjct: 4 LLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRP 63
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
Y ++S++ V D++ L +YK M K + D ++NIL+ + A A ++
Sbjct: 64 TAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVF 123
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + DV+TY+ +++ +K+ E M + G PN T+ S+++A
Sbjct: 124 GDMFKLN----VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
+AG V++A +F++M+Q G +P++ NIL+ A + Q +RAF RS+T T
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT 239
Query: 465 QVALGEDYDGNTDRISNME----HKDKQSITNTPNF---------------VPNSHYSSF 505
+L D ME K K ++N + V +
Sbjct: 240 YNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMV 299
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSG 562
D + T N+L C + RV+A L +M+ GL+ + +++ ILI+ G +G
Sbjct: 300 DNDIKYDIVTIN-NVL--DCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A +L M E+G +P+++ Y T I + L A LF EMK + PN+V+Y
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYS 416
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+L+ +G ++++++M G N LI+
Sbjct: 417 SLIEG---FGKAGRTDAAISLFREMKAEGCPPNHVTYNLLID 455
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 191/467 (40%), Gaps = 66/467 (14%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + +G+ + AL+ A K P Y ++I V GD +Y+ +
Sbjct: 32 LFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQM 91
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ FN L++ A ++ V+ +M KL V D+ +Y IL+++ G
Sbjct: 92 LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRI 151
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ + + A+G + ++FTY +++ F A A + + M+ G+ P+ +T
Sbjct: 152 DAVMKLF---ESMTAQGC-QPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVT 207
Query: 401 WSSLINACANAGLVEQA--------------------------------MHLFEEMLQAG 428
++ LI+A G +E+A M LF +M G
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG 267
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N IL++ A + + ++L+ + + N D
Sbjct: 268 LVSNELTYAILIERLGWAGRVEDVWQLY-------------------LEMVDNDIKYDIV 308
Query: 489 SITNTPNFVPNSH-----YSSF-DKRF-SFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+I N + + + + F D +F T TYNIL+ AL+ EM
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G +PN I++ LI + G N+ A ++ M+E G++P+VV+Y++ I+ ++ R
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A SLF EMK PN VTY L+ R G + L +D
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 164/394 (41%), Gaps = 45/394 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP++Y +I G G ++E + +Q N++ ++S+M+ +A + +
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M + G+ D +YNIL+ A G A + G+ + + TY++++
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE-------VTYNSLL 244
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
Q +++ M + G+ N +T++ LI AG VE L+ EM+ +
Sbjct: 245 SSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIK 304
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N +L +A + + AF LF+ +M+ K +
Sbjct: 305 YDIVTINNVLDCLSKAGRVEAAFELFQ-----------------------DMKFKGLNAD 341
Query: 491 TNTPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMN 537
T T N + N D + P TYN L+ + ++ L
Sbjct: 342 TVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFL 401
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ G++PN +S++ LI+ G +G + A+ + + M+ +G P+ V Y I +R+
Sbjct: 402 EMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAG 461
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
R A EM+ Q VT L+R +Y
Sbjct: 462 RFGAAMEYLREMRDAGCQMGKVTKSLLVRIPPQY 495
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 56/357 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ +ID G G RA +S++ T N +NSL++ D++ +E+
Sbjct: 203 PDAVTYNILIDAFGKTGQL--ERAFDFVGKSRSFT-NEVTYNSLLSSLGRKGDIQGLMEL 259
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G++++ +Y IL++ AG ++Y E+ + +K D+ T + ++
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND----IKYDIVTINNVLD 315
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + A ++ +DM G+ +T+T++ LIN AG ++ A L EM + GC P
Sbjct: 316 CLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAP 375
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ + + A RLF +E K++
Sbjct: 376 NIITYNTLISSYGKWSNLSAATRLF-------------------------LEMKERGV-- 408
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
PN V YSS + F KA TD +L EM+ G PNH+++
Sbjct: 409 -APNVVS---YSSLIEGFG------------KAGRTD--AAISLFREMKAEGCPPNHVTY 450
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+LID +G A++ L+ MR+ G V T ++ V + + +++A S F+E
Sbjct: 451 NLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKV--TKSLLVRIPPQYMEEAQSFFQE 505
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ + + + G+K D+ + + K N +I+ G G +Y
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ +I N++++ A ++ E++++M+ G+ AD +YNIL+ AG
Sbjct: 297 EMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTP 396
A + E +E G ++ TY+T++ + KW + A ++ +M GV P
Sbjct: 357 KLDAAGALLLE---MEENGCAP-NIITYNTLISSYG--KWSNLSAATRLFLEMKERGVAP 410
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +++SSLI AG + A+ LF EM GC PN N+L+ + A +F A
Sbjct: 411 NVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYL 470
Query: 457 R 457
R
Sbjct: 471 R 471
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 188/438 (42%), Gaps = 93/438 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP +I G G +++ AI+E+++ + +N L+ V A LK
Sbjct: 288 SPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEF 347
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M++ GV D +Y++L+ A AG A+ + +K +EA ++ + + +S I+
Sbjct: 348 IVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIV---LKEMEANNIMP-NSYVFSRIL 403
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D WQ + +V ++M ++GV P+ ++ +I+ ++ AM F++ML G +
Sbjct: 404 ASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQ 463
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ N L+ +A +RA LF ME
Sbjct: 464 PDTVTWNTLIDCHCKAELHERAEELFEEM----------------------MEK------ 495
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
F P TT+NI++ + + VK LM MR++GL PN
Sbjct: 496 -------------------GFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNV 536
Query: 549 ISWTILIDACGGSGNVEGALQIL-----------------------------------KI 573
+++T LID G SG A++ L ++
Sbjct: 537 VTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRL 596
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR D + P ++A + I +R +AFS+ + MK ++P++VTY TL++A R
Sbjct: 597 MRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDK 656
Query: 634 LHEVQQCLAVYQDMWKAG 651
++V +VY++M AG
Sbjct: 657 FNKVP---SVYEEMILAG 671
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 223/499 (44%), Gaps = 63/499 (12%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L+ +N+L+N A +DL+ + + M++ G +D +Y+++
Sbjct: 166 RSEKLYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLI 225
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ + ++ + Q++Y E++ L+LDV + I+ FA A A++
Sbjct: 226 IQSLVRSNRIDSPILQKLYSEIQC----DKLELDVQLSNDIIVGFAKAGDPNKAMEFLGM 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ ++G++P T T ++I+A ++G + +A +FEEM G +P ++ N LL+ V+A
Sbjct: 282 VQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGM 341
Query: 449 FDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + ++ V+ E Y D SN + I N +PNS+
Sbjct: 342 LKDA--EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVF 399
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ ++M
Sbjct: 400 SRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDH--AMDTFDKM 457
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID + E A ++ + M E G SP V + I +R
Sbjct: 458 LSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERW 517
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+L M+ + PN+VTY TL+ + G + +CL +DM AG K + T
Sbjct: 518 DDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECL---EDMKSAGLKPSSTMY 574
Query: 660 KELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGL 719
LI + + + ++ N + R +S +P L L N I+ G
Sbjct: 575 NALINAYAQKGLSEQAVNAFRLM---RADSLKPSLLAL-------------NSLINAFGE 618
Query: 720 TKVEARIIVLAVLRMMKEN 738
+ +A +VL+ MKEN
Sbjct: 619 DRRDAE--AFSVLKYMKEN 635
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 140/311 (45%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN Y+ I+ G++ KS + +++++ V + + +N +++ L ++
Sbjct: 394 PNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDT 453
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C A A+E++ E+ KG V T++ ++
Sbjct: 454 FDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMME---KGFSPC-VTTFNIMIN 509
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + W + +M S G+ PN +T+++LI+ +G A+ E+M AG +P
Sbjct: 510 SFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFRL R+ +L + +AL + + + +D +
Sbjct: 570 SSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGE-----DRRDAE 624
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + + K KP TY LMKA + +V ++ EM G +P
Sbjct: 625 AFS----------VLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTP 674
Query: 547 NHISWTILIDA 557
+ + +L A
Sbjct: 675 DRKARAMLRSA 685
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 21/349 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 339
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 340 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 399
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 400 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 454
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 455 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
++P++VTY T++ G LHEV+ A+Y M + G ND L +
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEGLMKNDCTLSD 613
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 172/394 (43%), Gaps = 38/394 (9%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ VT N + ++ A + + + M G D+ +Y +++ C G+T L
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + +++ +G L+ V Y+TI+ K AL + ++M + G+ PN +T+S
Sbjct: 854 AFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ N G A L +M++ P+ + L+ A V+ + A +L
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL------- 962
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------PTTT 516
YD R + S+ N F + + F F P
Sbjct: 963 ---------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMFEFMVSKHCFPDVV 1011
Query: 517 TYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+K C Y RV+ M EM GL N +++ ILI +G+ + A +I K
Sbjct: 1012 TYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 1070
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + TY ++ + G
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG- 1129
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+V+ ++ ++ G K + +I +C
Sbjct: 1130 --KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 1161
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 868 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 981
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 982 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 1075
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 1076 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 1175 EMKEDGTLPNSGCYNTLIRARLRDG 1199
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 184/433 (42%), Gaps = 46/433 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 678 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 783
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 784 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D AF L K + + Y+ D + +H K+ ++
Sbjct: 844 GLCKRGDTDLAFNLLNKMEQGKLEPGV-LIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 902
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T++ L+ A + V+A L
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + P+ ++++ LI+ ++ A Q+ + M PDVV Y T IK +
Sbjct: 963 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 1022
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
KR+++ +F EM + N VTY L++ + G Q+ ++++M G N
Sbjct: 1023 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPN 1079
Query: 656 DTYLKELIEEWCE 668
L++ C+
Sbjct: 1080 IMTYNTLLDGLCK 1092
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 55/361 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + +++ F++L++ + K ++
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M K + + +Y+ L+ C+ A++++ + + +K DV TY+T++K
Sbjct: 963 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF---EFMVSKHCFP-DVVTYNTLIK 1018
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F K + ++V +M G+ NT+T++ LI AG + A +F+EM+ G P
Sbjct: 1019 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N LL + + ++A +F SK +
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME-------------------------- 1112
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
PT TYNI+++ C L + G+ P+ +
Sbjct: 1113 ---------------------PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 1151
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I G+ E A + K M+EDG P+ Y T I+ +R + + L +EM
Sbjct: 1152 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211
Query: 610 K 610
+
Sbjct: 1212 R 1212
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 37/314 (11%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 212 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 270
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLS 462
V A+ L ++M++ G +P+ N ++ + + + + AF F R ++
Sbjct: 271 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
T + G + N+ + + S + P TY+ L+
Sbjct: 331 YTALVNG--------------------LCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + K L EM + + P+ ++++ LI+ ++ A Q+ +M G
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + + Q+
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 641 LA------VYQDMW 648
+ + D+W
Sbjct: 491 FSQMDFFGISPDIW 504
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 997 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 1052
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 1144
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 1145 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 1186 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 251 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 309
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 310 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L A + G + E ++ ++++M + + LI C I + NQ
Sbjct: 370 LDAFVKNGKVLEAKE---LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +N L+ A Y V +L +M +G+ + ++ I+I+ V AL I
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PD V + + R R+ A SL ++M +P++V Y ++ + +
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V ++++ + G + N L+ C
Sbjct: 306 ---TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 339
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 21/349 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
++P++VTY T++ G LHEV+ A+Y M + G ND L +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEGLMKNDCTLSD 510
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ LI+ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L A + G + E ++ ++++M + + LI C I + NQ
Sbjct: 267 LDAFVKNGKVLEAKE---LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +N L+ A Y V +L +M +G+ + ++ I+I+ V AL I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PD V + + R R+ A SL ++M +P++V Y ++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V ++++ + G + N L+ C
Sbjct: 203 T---KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 21/349 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLVNG---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
++P++VTY T++ G LHEV+ A+Y M + G ND L +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEGLMKNDCTLSD 510
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ L++ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L A + G + E ++ ++++M + + L+ C I + NQ
Sbjct: 267 LDAFVKNGKVLEAKE---LFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +N L+ A Y V +L +M +G+ + ++ I+I+ V AL I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PD V + + R R+ A SL ++M +P++V Y ++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V ++++ + G + N L+ C
Sbjct: 203 T---KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 188/440 (42%), Gaps = 60/440 (13%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
R RD A R + ++ SPN+Y II GD K + + ++
Sbjct: 180 RSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGIS 239
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ +N+L++ + +K + + + M GV A++ SYN ++ C G E+
Sbjct: 240 PNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGEL 299
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V+ + KG++ D TY+T+V F L + +M+ G++PN +T+++LIN
Sbjct: 300 ---VEEMRGKGLVP-DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLIN 355
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG + +A+ +F++M G PN + L+ + + A+++ +S
Sbjct: 356 CMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS---- 411
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
F P+ TYN L+ C
Sbjct: 412 -------------------------------------------GFSPSVVTYNALVHGYC 428
Query: 527 TDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
RV+ + +R + GL P+ +S++ +I + A Q+ + M E G+ PD
Sbjct: 429 F-LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y++ I+ ++L +AF LF EM + P+ VTY +L+ A G E+ + L +
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG---ELSKALRL 544
Query: 644 YQDMWKAGYKANDTYLKELI 663
+ +M + G+ ++ LI
Sbjct: 545 HDEMVQRGFLPDNVTYSVLI 564
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 169/406 (41%), Gaps = 68/406 (16%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
DY + ++ D+ V+ N+Y +N ++ V+ DL+ L + M+K G+ ++ +YN
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ A C +E ++ + GV ++ +Y++++ ++ E+
Sbjct: 247 TLIDASCKKKKV---KEAMALLRAMAVGGVAA-NLISYNSVINGLCGKGRMSEVGELVEE 302
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P+ +T+++L+N G + Q + L EM+ G PN L+ +A
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
RA +F D+ +
Sbjct: 363 LSRAVEIF-----------------------------DQMRVR----------------- 376
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGS 561
+P TY L+ C K LMNE M G SP+ +++ L+
Sbjct: 377 -GLRPNERTYTTLIDGFCQ-----KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V+ A+ IL+ M E G+ PDVV+Y+T I R + L +AF + EEM + P+ VTY
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+L++ L E ++++M + G ++ LI +C
Sbjct: 491 SSLIQGLCLQQKLVE---AFDLFREMMRRGLPPDEVTYTSLINAYC 533
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 251/609 (41%), Gaps = 90/609 (14%)
Query: 50 PTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFAS 109
PTV S L + +RR S+ DY D A ++ +D M+ V +
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDY--DDAERVFRD-------MVRNGVS---------PN 206
Query: 110 MLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKLLKNECQR 164
+ + ++ G+V +G ++ +G ++K+ + G++P L D S K E
Sbjct: 207 VYTYNVIIRGVVS---QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMA 263
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL + V G+ L + + L + R+ ++ ++ +R +VP ++ +
Sbjct: 264 LLRAMAVG---GVAANLISYNSVINGLCGKGRMSEVG----ELVEEMRGKGLVPD-EVTY 315
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
V F K+ +L L SPN+ T+I+ G+ ++ I++ +R
Sbjct: 316 NTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRV 375
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTV 341
+ + N + +L++ E YK + ++ G + +YN L+ C G
Sbjct: 376 RGLRPNERTYTTLIDGFCQK-GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV- 433
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
QE G ++ + +G L DV +YST++ F + A ++KE+M+ GV P+T+T+
Sbjct: 434 --QEAVGILRGMVERG-LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490
Query: 402 SSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSW 459
SSLI C LVE A LF EM++ G P+ L+ A CV+ + +A RL
Sbjct: 491 SSLIQGLCLQQKLVE-AFDLFREMMRRGLPPDEVTYTSLINAYCVDG-ELSKALRLHDEM 548
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------- 512
Q D + I+ + K + + KR K
Sbjct: 549 ----VQRGFLPDNVTYSVLINGLNKKARTKVA---------------KRLLLKLFYEESV 589
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
P TYN L++ C NE ++V L+ G + A ++ K
Sbjct: 590 PDDVTYNTLIENCSN---------NEFKSV---------EGLVKGFCMKGLMNEADRVFK 631
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + P+ Y I R + +A++L+ E++H + V I L++A +R G
Sbjct: 632 TMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691
Query: 633 SLHEVQQCL 641
E+ + L
Sbjct: 692 MNDELSRLL 700
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 52/319 (16%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+H A VL + + + + ++ + + A +V DM+ GV+PN T++ +I +
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + +M + G PN N L+ A + + A L R+ + L
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANL-- 277
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
+YN ++ C
Sbjct: 278 ---------------------------------------------ISYNSVINGLCGKGR 292
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
V L+ EMR GL P+ +++ L++ GN+ L +L M G+SP+VV YTT
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ L +A +F++M+ ++PN TY TL+ + G ++E + L+ +M
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS---EMI 409
Query: 649 KAGYKANDTYLKELIEEWC 667
+G+ + L+ +C
Sbjct: 410 VSGFSPSVVTYNALVHGYC 428
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 59/311 (18%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-----CANAGLVEQAMHL 420
+ +VK + + AL + G P ++++++++A +N + A +
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F +M++ G PN N++++ V ++ R
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM--------------------- 233
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMN 537
+K+ I+ P TYN L+ A C +VK AL+
Sbjct: 234 -----EKEGIS---------------------PNVVTYNTLIDASCKKK-KVKEAMALLR 266
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M G++ N IS+ +I+ G G + ++++ MR G+ PD V Y T + +
Sbjct: 267 AMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
L Q L EM + PN+VTY TL+ + G+L + + ++ M G + N+
Sbjct: 327 NLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL---SRAVEIFDQMRVRGLRPNER 383
Query: 658 YLKELIEEWCE 668
LI+ +C+
Sbjct: 384 TYTTLIDGFCQ 394
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 508 RFSFKPTTTTYNILMKACCT-------DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
R F PT +YN ++ A DY + + +M G+SPN ++ ++I
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++E L ++ M ++G+SP+VV Y T I + K++K+A +L M + NL++
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
Y +++ G + EV + + ++M G ++ L+ +C ++ N +QG
Sbjct: 280 YNSVINGLCGKGRMSEVGELV---EEMRGKGLVPDEVTYNTLVNGFC----KEGNLHQGL 332
Query: 681 VTL 683
V L
Sbjct: 333 VLL 335
>gi|387219047|gb|AFJ69232.1| hypothetical protein NGATSA_2004410 [Nannochloropsis gaditana
CCMP526]
gi|422293010|gb|EKU20311.1| hypothetical protein NGA_2004410 [Nannochloropsis gaditana CCMP526]
gi|422293947|gb|EKU21247.1| hypothetical protein NGA_2004420 [Nannochloropsis gaditana CCMP526]
Length = 1057
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 211/451 (46%), Gaps = 47/451 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNI 291
KKR+ S R + ++ + P++ + I CG G + + ++ ++R+ + L
Sbjct: 426 KKRNGASHHRRH---QRLVPEPDLVTYHSAIKACGHAGQWEHALSLLAEVRAARWIELEP 482
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+ + A +F E +++ G +++ +YN ++AC G LA ++ ++
Sbjct: 483 STYNAAIAACAKSGRFN-EALDLLKECGDASNVVTYNSAMQACSSGGRPDLAFQL---LQ 538
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++A GV + DV +Y+T+++ + +A V M +AGV+ +T+++L+NACA
Sbjct: 539 VMKANGV-EPDVVSYTTVMQRSSV----DVATSVLNRMRAAGVSVGVMTYNALLNACARE 593
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKT- 464
G ++ + EEM PN + ++AC Q+ A + T+ SK
Sbjct: 594 GDWRTSLAMLEEMDHQSVAPNVVTYTLAMEACGRGGQWQAALEVLNEMTVRGVPLDSKAC 653
Query: 465 QVALG-----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSH------YSSFDKRFSF-- 511
Q A+ +D++ + ++ + + I + + + ++F + +
Sbjct: 654 QTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTKELYEKAMAAFGRAGEWEK 713
Query: 512 ---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P N+ M+AC + L+ M + G++P+ S+ I AC
Sbjct: 714 VLWLLEGMDRPDQKVTNLAMRACAQAGRWEEAVGLLQNMTSKGIAPDQWSYNTAIHACAQ 773
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+GN E AL++LK M ++G+ PDVV+YTTA+ C ++ + L EEM + PN +
Sbjct: 774 AGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLRLLEEMVKKGVHPNHRS 833
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ A +G+ + + +AV M + G
Sbjct: 834 FNAIMSA---HGNAGQATEAIAVLGLMTEHG 861
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 104/487 (21%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-- 307
+L +P+ + RT++ C + A+ ++ +V ++ + ++ + A ++
Sbjct: 170 NLKAPSPLLVRTLLMACVNAESLPLALAV---VKMPHVHPSVQQYTLVIQICARQERWFE 226
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ + ++M+ G D+ +Y ++ C AG A + E+K + ++ D TY+
Sbjct: 227 AVRLLRDMRTRGAPPDLVAYTAVMDCCAKAGQWEAALTLIPEMK----EAGVRPDRITYN 282
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T + A WQ AL+ M PN I+++S +++CA G ++A+ L EEM QA
Sbjct: 283 TAIDACAKGGQWQRALEFLRGMEE----PNLISYNSALDSCAKTGRWKEAVGLLEEMRQA 338
Query: 428 G-------------------------------------CEPNSQCCNILLQACVEACQFD 450
G PN N ++AC + +F+
Sbjct: 339 GRRKDGRGSTVSDQTQEVGANQGNTTNTIPGNRGSKPSIRPNIISYNTAIEACAKRGRFE 398
Query: 451 RAFRLFRSWTLSKTQVALGEDY--DGNTDRISNMEHKDKQSITNTPNFVPN-------SH 501
A + RS + T+ A G + R H+ Q + P+ V H
Sbjct: 399 EALAILRSMQVPDTEKAGGHVPLPSASKKRNGASHHRRHQRLVPEPDLVTYHSAIKACGH 458
Query: 502 YSSFDKRFSF----------KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ S + +TYN + AC R ++ ++ G + N +++
Sbjct: 459 AGQWEHALSLLAEVRAARWIELEPSTYNAAIAACAKSG-RFNEALDLLKECGDASNVVTY 517
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-------------------- 591
+ AC G + A Q+L++M+ +G+ PDVV+YTT ++
Sbjct: 518 NSAMQACSSGGRPDLAFQLLQVMKANGVEPDVVSYTTVMQRSSVDVATSVLNRMRAAGVS 577
Query: 592 -----------VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
C R + + ++ EEM H + PN+VTY + A R G + Q
Sbjct: 578 VGVMTYNALLNACAREGDWRTSLAMLEEMDHQSVAPNVVTYTLAMEACGRGG---QWQAA 634
Query: 641 LAVYQDM 647
L V +M
Sbjct: 635 LEVLNEM 641
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 145/379 (38%), Gaps = 67/379 (17%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
+++ C GD+ S A+ E++ Q+V N+ + M + LEV M G
Sbjct: 586 LLNACAREGDWRTSLAMLEEMDHQSVAPNVVTYTLAMEACGRGGQWQAALEVLNEMTVRG 645
Query: 320 VMADMASYNILLKACCLAGN---------TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V D + + C + V AQ G KG K Y +
Sbjct: 646 VPLDSKACQTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTK---ELYEKAM 702
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A W+ L + E M P+ + + ACA AG E+A+ L + M G
Sbjct: 703 AAFGRAGEWEKVLWLLEGM----DRPDQKVTNLAMRACAQAGRWEEAVGLLQNMTSKGIA 758
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N + AC +A ++A +L + +G++
Sbjct: 759 PDQWSYNTAIHACAQAGNAEKALKLLKE---------MGQE------------------- 790
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
P +Y M AC + D L+ EM G+ PNH
Sbjct: 791 -------------------GVVPDVVSYTTAMDACASVGDVETSLRLLEEMVKKGVHPNH 831
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ ++ A G +G A+ +L +M E G++PDV +YT A+ +C+R + A + E
Sbjct: 832 RSFNAIMSAHGNAGQATEAIAVLGLMTEHGLTPDVKSYTLAMDICLRQGLWQVALKIVER 891
Query: 609 MKHYQIQPNLVTYITLLRA 627
M +++ + ++Y + A
Sbjct: 892 MHATRVRFDAISYGKAIHA 910
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 32/317 (10%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQN------------VTLNIYVFNSLMNVNAHDLK 306
C+T IDVC D+ K+ ++ D+ +Q T +Y A + +
Sbjct: 653 CQTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTKELYEKAMAAFGRAGEWE 712
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L + + M + D N+ ++AC AG +E G ++++ +KG+ D ++Y
Sbjct: 713 KVLWLLEGMDR----PDQKVTNLAMRACAQAGRW---EEAVGLLQNMTSKGIAP-DQWSY 764
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + A A + ALK+ ++M GV P+ +++++ ++ACA+ G VE ++ L EEM++
Sbjct: 765 NTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLRLLEEMVK 824
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN + N ++ A A Q A + T+ L D T M+
Sbjct: 825 KGVHPNHRSFNAIMSAHGNAGQATEAIAVLG----LMTEHGLTPDVKSYT---LAMDICL 877
Query: 487 KQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+Q + V H + R F + I + ++EM G
Sbjct: 878 RQGLWQVALKIVERMHAT----RVRFDAISYGKAIHAAHLGEQWEVAVGFLDEMVESGWL 933
Query: 546 PNHISWTILIDACGGSG 562
P+H S+T++++AC +G
Sbjct: 934 PSHKSYTLVVEACRRAG 950
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ Y ++++ C ++ L+ +MRT G P+ +++T ++D C +G E AL +
Sbjct: 206 PSVQQYTLVIQICARQERWFEAVRLLRDMRTRGAPPDLVAYTAVMDCCAKAGQWEAALTL 265
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+E G+ PD + Y TAI C + + ++A M+ +PNL++Y + L + ++
Sbjct: 266 IPEMKEAGVRPDRITYNTAIDACAKGGQWQRALEFLRGME----EPNLISYNSALDSCAK 321
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKAN 655
G E + + ++M +AG + +
Sbjct: 322 TGRWKEA---VGLLEEMRQAGRRKD 343
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+P+ + T I C G+ K+ + +++ + V ++ + + M+ A D++ +L
Sbjct: 758 APDQWSYNTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLR 817
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M K GV + S+N ++ A AG A + G L + L DV +Y+ +
Sbjct: 818 LLEEMVKKGVHPNHRSFNAIMSAHGNAGQATEAIAVLG----LMTEHGLTPDVKSYTLAM 873
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ WQ+ALK+ E M + V + I++ I+A E A+ +EM+++G
Sbjct: 874 DICLRQGLWQVALKIVERMHATRVRFDAISYGKAIHAAHLGEQWEVAVGFLDEMVESGWL 933
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + ++++AC A + A + R W K +A G +++ +D +
Sbjct: 934 PSHKSYTLVVEACRRAGESRLAEEVSRRWARDKESLARANRRRGGKG-LADTRRRDNRGK 992
Query: 491 TNT 493
+N+
Sbjct: 993 SNS 995
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 113/300 (37%), Gaps = 66/300 (22%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H L LD + IV A + + A+K +LS P+ + +L+ AC NA
Sbjct: 134 HASLHPPLLLDDERQAAIVSKLAKEGYLKQAVK----LLSNLKAPSPLLVRTLLMACVNA 189
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE- 470
+ A+ + + P+ Q +++Q C ++ A RL R +T+ A +
Sbjct: 190 ESLPLALAVVK---MPHVHPSVQQYTLVIQICARQERWFEAVRLLRD---MRTRGAPPDL 243
Query: 471 -DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
Y D + + ++T P K +P TYN + AC
Sbjct: 244 VAYTAVMDCCAKAGQWEA-ALTLIPEM----------KEAGVRPDRITYNTAIDACAKGG 292
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------- 578
+ R + M PN IS+ +D+C +G + A+ +L+ MR+ G
Sbjct: 293 QWQRALEFLRGME----EPNLISYNSALDSCAKTGRWKEAVGLLEEMRQAGRRKDGRGST 348
Query: 579 ----------------------------MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ P++++Y TAI+ C + R ++A ++ M+
Sbjct: 349 VSDQTQEVGANQGNTTNTIPGNRGSKPSIRPNIISYNTAIEACAKRGRFEEALAILRSMQ 408
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ + L+ AC + ++ AL ++K+ + P V YT I++C R +R +A
Sbjct: 173 APSPLLVRTLLMACVNAESLPLALAVVKMPH---VHPSVQQYTLVIQICARQERWFEAVR 229
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L +M+ P+LV Y ++ ++ G + + L + +M +AG + + I+
Sbjct: 230 LLRDMRTRGAPPDLVAYTAVMDCCAKAG---QWEAALTLIPEMKEAGVRPDRITYNTAID 286
Query: 665 EWCEG 669
+G
Sbjct: 287 ACAKG 291
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 57/316 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D +TY+ +V + AK ++ AL V M + PNT+T ++LI+A GL +QA+
Sbjct: 80 DQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAI 139
Query: 419 HLFEEM------LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+F +M L+ GCEPN N+L+ A + D ++ +
Sbjct: 140 QVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMR------------ 187
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
DGNTD+ S +P + TYN L+ AC Y
Sbjct: 188 DGNTDQ-------------------------------SVQPNSATYNTLINACGKGGLYE 216
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L++ M G+ P+HI++T LIDA G +G E A K M+ +S DV+AYT I
Sbjct: 217 KAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMI 276
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
R ++A +F+ M+H ++PN VTY++L+ A + G E + V+ M ++
Sbjct: 277 DAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRN---VFNIMRES 333
Query: 651 GYKANDTYLKELIEEW 666
GY+ N LI+ +
Sbjct: 334 GYEGNVLIYSSLIDAY 349
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 161/398 (40%), Gaps = 60/398 (15%)
Query: 230 EFGKKRDLVSALRAYDASKKH-LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
E ++ D L + SKK PN + +I G G + +++++ +
Sbjct: 19 ELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQ 78
Query: 289 LNIYVFNSLMNVNAHDLKF--TLEVYKNMQK---LGVMADMASYNILLKACCLAGNTVLA 343
+ Y + +L+N F L V+ +M++ + + N L+ A G A
Sbjct: 79 ADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQA 138
Query: 344 QEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA----GVTP 396
+++ +++ G+ + +V TY+ ++ + +KV + M V P
Sbjct: 139 IQVFFDMRD-GTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQP 197
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+ T+++LINAC GL E+A L + M++ G +P+ L+ A +A ++ A F
Sbjct: 198 NSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTF 257
Query: 457 RSWTLSKTQV----------ALGED--YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ + V A G + Y + M+H
Sbjct: 258 KGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHS------------------- 298
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDAC 558
+P TY LM+A Y + + + N MR G N + ++ LIDA
Sbjct: 299 -----GLRPNQVTYLSLMEA----YGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAY 349
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
G +GN A ++L +MR G P+++ Y+ + C +S
Sbjct: 350 GKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKS 387
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 141/337 (41%), Gaps = 33/337 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ V +GK + AL + K+ PN C +ID G Y ++ ++
Sbjct: 84 YTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFF 143
Query: 281 DLRSQNVTL------NIYVFNSLMNVNAHD--LKFTLEVYKNMQK----LGVMADMASYN 328
D+R L N+ +N L++ + L ++V + M+ V + A+YN
Sbjct: 144 DMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYN 203
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ AC G A+E+ V + GV + D TY+ ++ + A W+ A +
Sbjct: 204 TLINACGKGGLYEKAEEL---VDLMVEHGV-QPDHITYTALIDAYGKAGLWENAENTFKG 259
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V+ + + ++++I+A GL ++A +F+ M +G PN L++A +A
Sbjct: 260 MKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGL 319
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ + +F + Y+GN S++ + N++ + +R
Sbjct: 320 PEESRNVF--------NIMRESGYEGNVLIYSSL----IDAYGKAGNYLEAARMLDMMRR 367
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+P TY+ ++ +CC + + L+ ++ G
Sbjct: 368 AGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 29/387 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ + +Y ++ V+ N+Y +N L+ + +L+ L + M++ G + ++ +YN L
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL 255
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G E +G +K + +KG ++ ++ +Y+ I+ + A ++ E+M
Sbjct: 256 IDAYCKMGRI---DEAFGLLKSMSSKG-MQPNLISYNVIINGLCREGSMKEAWEILEEMG 311
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G TP+ +T+++L+N G QA+ + EM++ G P+ L+ + +A +
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 451 RAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
RA F R L + DG + +Q + N + N S
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFS----------RQGLLNEAYRILNEMTES--- 418
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F P+ TYN + C +AL + EM GL+P+ +S++ +I G ++
Sbjct: 419 --GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M E G+SPD V Y++ I+ +RL +A L +EM + P+ TY TL+
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGY 652
A G L+ + L ++ +M G+
Sbjct: 537 NAYCVEGDLN---KALHLHDEMIHKGF 560
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 147/361 (40%), Gaps = 56/361 (15%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EVY+ M + V ++ +YNIL++ C G +GE +E G L +V TY+T+
Sbjct: 200 EVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE---MERNGCLP-NVVTYNTL 255
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A + + M S G+ PN I+++ +IN G +++A + EEM G
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N LL + F +A +
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMV----------------------------- 346
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
R P+ TY L+ + C + R ++MR GL PN
Sbjct: 347 ------------------RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 388
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T LID G + A +IL M E G SP VV Y I +R+++A + +
Sbjct: 389 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 448
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM + P++V+Y T++ R G E+ + + Q+M + G + LI+ C
Sbjct: 449 EMVEKGLAPDVVSYSTIISGFCRKG---ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 505
Query: 668 E 668
E
Sbjct: 506 E 506
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 188/470 (40%), Gaps = 54/470 (11%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F +L L + +++ PN+ T+ID G ++ + + + S+
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N+ +N ++N +K E+ + M G D +YN LL C GN A
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I+ E+ + + V TY+ ++ A+ A++ + M G+ PN T+++L
Sbjct: 340 VIHAEM----VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW----- 459
I+ + GL+ +A + EM ++G P+ N + + + A + +
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455
Query: 460 ---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S + + G G DR M KQ + P
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQM----KQEMVEK----------------GVSPDAV 495
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ C +A L EM +GL P+ ++T LI+A G++ AL + M
Sbjct: 496 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 555
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY------------- 621
G PD V Y+ I + R ++A L ++ + + P+ VTY
Sbjct: 556 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 615
Query: 622 --ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ L++ G +HE + V++ M + +K + +I C G
Sbjct: 616 SVVALIKGFCMKGLMHEADR---VFESMVERNHKPGEAVYNVIIHGHCRG 662
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 154/383 (40%), Gaps = 63/383 (16%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASY 327
D M+ R + + R+ ++ + L+N E Y+ M + G + +Y
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLN----------EAYRILNEMTESGFSPSVVTY 427
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N + C+ +E G V+ + KG L DV +YSTI+ F A ++K+
Sbjct: 428 NAFIHGHCVLERM---EEALGVVQEMVEKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
+M+ GV+P+ +T+SSLI + +A L +EML G P+ L+ A CVE
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
L ++ L + G D T + + +KQ+ T
Sbjct: 544 -------DLNKALHLHDEMIHKGFLPDAVTYSVL-INGLNKQARTREA------------ 583
Query: 507 KRFSFK-------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
KR FK P+ TY+ L++ C ++ S LI
Sbjct: 584 KRLLFKLIYEESVPSDVTYDTLIENCSNIEFK------------------SVVALIKGFC 625
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + A ++ + M E P Y I R L +AF+L++EM H P+ V
Sbjct: 626 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 685
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
T ITL++A + G E+ + +
Sbjct: 686 TVITLIKALFKEGMNEEMSEVIG 708
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R P TYNIL++ C+ K L EM G PN +++ LIDA G ++
Sbjct: 207 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +LK M GM P++++Y I R +K+A+ + EEM + P+ VTY TLL
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G+ H Q L ++ +M + G + LI C+
Sbjct: 327 NGYCKEGNFH---QALVIHAEMVRNGVSPSVVTYTALINSMCKA 367
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 17/346 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K R+L A+ +D + PN T+ID G ++ I +
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ +N+ ++ + ++ L V + M + G+ D+ SY+ ++ C G
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E + KGV D TYS++++ + + A + ++ML G+ P+
Sbjct: 475 LDRAFQMKQE---MVEKGV-SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LINA G + +A+HL +EM+ G P++ ++L+ + + A RL
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKP 513
++ V YD + SN+E K ++ F D+ F + KP
Sbjct: 591 IYEES-VPSDVTYDTLIENCSNIEFKSVVALIK--GFCMKGLMHEADRVFESMVERNHKP 647
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YN+++ C KA L EM G P+ ++ LI A
Sbjct: 648 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKA 693
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 192/428 (44%), Gaps = 39/428 (9%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFT 308
L PN++ +ID G+ +++RA++ +++ + ++ +NSL++ DL+
Sbjct: 195 LPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ M+K G AD+ +YN L+ G A +GE+K +GV+ +V T+ST
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKR---QGVVA-NVVTFST 310
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
V F Q A+K+ M G+ PN T++SL++ AG ++ A+ L +EM+ G
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370
Query: 429 CEPNSQCCNILLQA-CVEA--CQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRIS 480
PN +++ C E + D L ++ L T + G + N++R
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNE 538
++ ++ K + + Y L+ C D K+L+++
Sbjct: 431 DLLNQMKNK--------------------GMELDVSLYGTLIWGLCKDQKVDEAKSLLHK 470
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL PN + +T ++DA +G A+ +L + + G P+VV Y I ++
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A S F +M+ + PN+ Y L+ + GSL++ + +M G +
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM---NEMIDKGMSLDKVV 587
Query: 659 LKELIEEW 666
LI+ +
Sbjct: 588 YTSLIDGY 595
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 229/533 (42%), Gaps = 42/533 (7%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L D G ++ V + + + R+P +++L N+ L R ++P ++
Sbjct: 144 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG-GLVRRLFDLLPVPNVFT 202
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N V +F K+ +LV A + K SP++ ++ID G CGD + + ++R
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ +N+L+N + ++ + M++ GV+A++ +++ + A C G
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG--- 319
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L QE + +G++ + FTY+++V A A+ + ++M+ G+ PN +T+
Sbjct: 320 LVQEAMKLFAQMRVRGMMP-NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +++ G V +A ++ M + G + N L+ +RA L
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Query: 462 SKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---- 509
++ + G D D ++ HK PN V + + D F
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK-MAGCGLRPNTV--IYTTIMDALFKAGK 495
Query: 510 --------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
F+P TY L+ C +A+ N+MR +GL PN ++T
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G++ A+ ++ M + GMS D V YT+ I ++ L+ AF+L +M
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+Q +L Y + S + +++ +Q+ V +M G + T LI ++
Sbjct: 616 LQLDLYCYTCFI---SGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+NI++ C + +AL M+ +G SP+ +++ LID G G++E Q+
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ MR+ G + DVV Y I + R+++A+S F EMK + N+VT+ T + A +
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQGEV 681
G VQ+ + ++ M G N+ L++ C+ V+ D+ +QG V
Sbjct: 318 EGL---VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 372
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN I TI+D G ++ A+ + N+ + +L++ A + +
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGN--------------------TVLAQEIYGEVK 351
+ M++LG+ ++ +Y L+ C G+ V I G +K
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597
Query: 352 H--------LEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L+ K + L+LD++ Y+ + F + Q A V +M+ G+TP+
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657
Query: 401 WSSLINACANAGLVEQAMHLFEEM 424
++ LI G +E+A L EM
Sbjct: 658 YNCLIRKYQKLGNMEEASSLQNEM 681
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 27/435 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + + F K DL AL + S T+I G CG ++ AI+E++
Sbjct: 273 LWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEM 332
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V A L+ V M++ GV+ + +Y++L+ A GN
Sbjct: 333 RDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY---GNA 389
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ +K +EA V + + + +S I+ + D WQ +V +M +GV P+ I
Sbjct: 390 ERWESARIVLKEMEASNV-QPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIF 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ LI+ ++ AM F+ ML G EP++ N L+ +A + DRA LF
Sbjct: 449 YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEE-M 507
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ K + ++ + + E D K +TN + P TY
Sbjct: 508 MEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNM-------------RSQGLLPNAVTY 554
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ A+ +++M+ GL P+ + L++A G + A+ MR+
Sbjct: 555 TTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRD 614
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG+ P ++A + I + +R +AF + + MK ++P++VTY TL++A +
Sbjct: 615 DGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDK 674
Query: 637 VQQCLAVYQDMWKAG 651
V +VY++M +G
Sbjct: 675 VP---SVYEEMILSG 686
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 193/435 (44%), Gaps = 45/435 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L++ A +D++ L + M++ G +D+ +Y+++
Sbjct: 181 QSEKLYEAFLLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLI 240
Query: 331 LKACCL--AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ N+ + Q+IY E+ + L++DV ++ I+ FA A AL+
Sbjct: 241 IRSLMKNNRANSSILQKIYREID----RDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGV 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ +G++ T T ++I N G E+A +FEEM G +P ++ N LL+ V+A
Sbjct: 297 VQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGL 356
Query: 449 F-DRAF---RLFRSWTLSKTQV-ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
D F + RS L Q +L D GN +R + K+ N PN++
Sbjct: 357 LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKE--MEASNVQPNAYVF 414
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+L+ K C D+ A + M
Sbjct: 415 SRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH--AMATFDRM 472
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ I+W L+D +G + A ++ + M E G P + I +R
Sbjct: 473 LSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERW 532
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+L M+ + PN VTY TL+ + G + +CL DM AG K + T
Sbjct: 533 DDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECL---DDMKAAGLKPSSTMY 589
Query: 660 KELIEEWCEGVIQDK 674
L+ + + + D+
Sbjct: 590 NALLNAYAQRGLSDQ 604
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D +F N + FGK L A+ +D P+ T++D G + ++
Sbjct: 443 RPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEE 502
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++E++ M+K G + ++NI++
Sbjct: 503 LFEEM--------------------------------MEK-GYLPCNTTFNIMI------ 523
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + +VK+L ++G+L + TY+T++ ++ + + A++ +DM +AG
Sbjct: 524 -NSFGDQERWDDVKNLLTNMRSQGLLP-NAVTYTTLIDIYGKSGRFDDAIECLDDMKAAG 581
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ P++ +++L+NA A GL +QA+ F M G +P+ N L+ A
Sbjct: 582 LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINA 630
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 211/470 (44%), Gaps = 63/470 (13%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 17 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136
Query: 339 N-----TVLAQ---------------------EIYGEVK------HLEAKGVLKLDVFTY 366
N +LAQ EI E K L+A G L TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG-LSPTAATY 195
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
IVK+F A AL + E+M GV+PN + ++ +++ A G A ++E+M+
Sbjct: 196 GCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 255
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG +P+ NIL+ A +A + D+A + + ++ + E Y D +
Sbjct: 256 AGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI-ETYTSILDGYVKGGNIQ 314
Query: 487 KQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTV 542
K FD K +P +YN L+ A + ++NEM
Sbjct: 315 KA-------------LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLAN 361
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN S+T L + +G+VE A + + M+++ ++ D+VAY +K C +S +++A
Sbjct: 362 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 421
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+F+++ ++ N +TY T+L +R G L + + L DM K G+
Sbjct: 422 AEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL---NDMQKHGF 468
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 171/409 (41%), Gaps = 55/409 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + F + RD L + K SP I+ + G+ K+ I E++
Sbjct: 159 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 218
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V+ N ++ +M+ A FT +V+++M G+ D+ YNIL+ A C AG
Sbjct: 219 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 278
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ G ++++EA +L + TY++I+ + Q AL+V + + +AG+ P ++
Sbjct: 279 ---DKALGVLENIEANRLLP-TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS 334
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++ A A +E A + EML G PN + L + A ++AF +F+
Sbjct: 335 YNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQR-- 392
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +A+ Y
Sbjct: 393 MKKENLAI---------------------------------------------DIVAYGA 407
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KACC R + ++ GL N I++ ++D G + A +L M++ G
Sbjct: 408 LLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHG 467
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D + YT+ IK C RS ++ M+ +++ N TY TL+
Sbjct: 468 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 516
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 33/305 (10%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+K +V Y++++ +A+A+ + A+ E+MLS G+ N + S+I+ A+AG E A
Sbjct: 48 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 107
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
H FE+ P N ++QA +A + L L++ + E + GN
Sbjct: 108 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL-----LAQMEE---EGFQGNLGL 159
Query: 479 ISNM-----EHKDKQSITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKACCTDYY 530
+ + E +D++ SF R PT TY ++K
Sbjct: 160 YTTVLNGFAEIRDEEKCL------------SFFHRLKACGLSPTAATYGCIVKLFTKAGN 207
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL + EM G+SPN + + +++D G+ A ++ + M G+ PD+V Y
Sbjct: 208 MAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNI 267
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ ++ R+ +A + E ++ ++ P + TY ++L + G+ +Q+ L V+ +
Sbjct: 268 LVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN---IQKALEVFDRIK 324
Query: 649 KAGYK 653
AG +
Sbjct: 325 TAGLR 329
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 119/312 (38%), Gaps = 54/312 (17%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y +V +A A E M ++ + PN ++SLI+A A A +E A+ EEML
Sbjct: 20 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79
Query: 426 QAGCEPNSQC-CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
G + N C+I+ G GN + +
Sbjct: 80 SQGIQLNEAVFCSIIS----------------------------GYASAGNNEAAEHWFE 111
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K N VP YN +++A C + V+AL+ +M
Sbjct: 112 KFK-----AENLVPGG---------------IVYNSIVQAYCQAGNMETVEALLAQMEEE 151
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G N +T +++ + E L ++ G+SP Y +K+ ++ + +A
Sbjct: 152 GFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKA 211
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ EEM + + PN + Y ++ +R G + V++DM AG K + L
Sbjct: 212 LDILEEMDKHGVSPNKMIYAMIMDGYARGG---DFTAAFKVWEDMVSAGLKPDIVIYNIL 268
Query: 663 IEEWCEGVIQDK 674
+ +C+ DK
Sbjct: 269 VHAFCKAGRMDK 280
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ DI+ N V F K + AL + + + P + +I+D G+ K+
Sbjct: 259 KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE 318
Query: 278 IYEDLRSQNVTLNIYVFNSLMN-------------------------------------V 300
+++ +++ + + +NSL++
Sbjct: 319 VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYA 378
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A D++ +++ M+K + D+ +Y LLKACC +G A E++ ++ LK
Sbjct: 379 RAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQI----TDAGLK 434
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ TY T++ +A A + DM G +TI ++S I AC +G E+
Sbjct: 435 HNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 494
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
M + E N++ L+ + A D+A + S Q+
Sbjct: 495 LAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQL 540
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 32/394 (8%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA-DMASYNILLK--ACCL 336
+R +++ NIY +++L+ L ++ M ++ +A + +YN ++K + C
Sbjct: 338 MREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCK 397
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ ++ + KG + DV TY+T++ F+ + ALK+ ++M A V P
Sbjct: 398 RNDCGGITRAMSLLREMATKGCIP-DVVTYATLIDAFSKRMEPERALKLFQEMKEANVKP 456
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +SSLI+A AG VE+A+ +FEEM P+ N L+ + Q D+AF ++
Sbjct: 457 NNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIY 516
Query: 457 RSWTLSKTQVALGEDYDGNTDRIS-----NMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ K Q+ DRI+ + K K SI + +
Sbjct: 517 DR--MRKLQI--------QPDRITFNALISASGKAKNSIRAL------EAMGDMTEIYGL 560
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ AC D+ + + EMRT G+ P +++ LI S ++ + +
Sbjct: 561 TPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFK 620
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I+ +M ++G++PD T I C R + L AF + E+ K + P+ VT+ T + A
Sbjct: 621 IVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA-- 678
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
G L ++ + +M G + L ++
Sbjct: 679 -VGKLDSSEKMFELLSEMESRGISPSKVTLNTIV 711
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 174/427 (40%), Gaps = 54/427 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K+ + AL+ + K+ PN Y ++I G ++ AI+E+
Sbjct: 424 VTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEE 483
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +++ FN+L++ + E+Y M+KL + D ++N L+ A A N
Sbjct: 484 MTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKN 543
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A E G++ + L D +Y+ ++ + + A +V E+M + G+ P T+
Sbjct: 544 SIRALEAMGDMTEIYG---LTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTV 600
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + + + + + + MLQ G P++ N L+ AC AF + +
Sbjct: 601 TFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKF 660
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K+ P T+N
Sbjct: 661 -----------------------------------------------KQLGVHPDNVTFN 673
Query: 520 ILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ A ++ L++EM + G+SP+ ++ ++ CG G ++ + + E
Sbjct: 674 TFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEK 733
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD V ++ I+ V L +A + K Q++ N + LL + R +
Sbjct: 734 RLEPDSVTFSLLIENYVSHHLLDKAVIAYHNCKRQQLELNSNVVMHLLESLIRKDEIEVA 793
Query: 638 QQCLAVY 644
+ L Y
Sbjct: 794 KLILKDY 800
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 136/358 (37%), Gaps = 71/358 (19%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL----- 413
+K DV ++S + + + A + M + PN T+S+LI GL
Sbjct: 308 VKRDVASWSIYITALGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRAL 367
Query: 414 ------------------------------------VEQAMHLFEEMLQAGCEPNSQCCN 437
+ +AM L EM GC P+
Sbjct: 368 SQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYA 427
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDY--DGNTDR-ISNMEHKDKQ 488
L+ A + + +RA +LF+ + + +L + G +R ++ E +
Sbjct: 428 TLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHE 487
Query: 489 SITNTPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYRV 532
I P+ F N+ F K + +P T+N L+ A +
Sbjct: 488 RI--VPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSI 545
Query: 533 KAL--MNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+AL M +M + GL+P+ S+ LIDACG SG+ A ++ + MR G+ P V +
Sbjct: 546 RALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNAL 605
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I RS L +F + + M + P+ T TL+ A +R L + L ++ +
Sbjct: 606 IYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQL 663
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 173/370 (46%), Gaps = 32/370 (8%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F + + M KLG+ +++N L+ C G A
Sbjct: 119 VTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ E+ + + +V +Y+TI+ MA+ V + M G P+ +T++++
Sbjct: 179 ELFNEM----VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM EML G PN N ++ Q + A RLF+
Sbjct: 235 IDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM----- 289
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G D +T ++ + + K+ + + V + + ++ +P +TYN LM
Sbjct: 290 ---VGRDVMPDTVTLTILVDGLCKEGMVSEARLV----FETMTEK-GVEPNISTYNALM- 340
Query: 524 ACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
D Y ++ LMNE + V G +P S+ ILI+ S ++ A +L M
Sbjct: 341 ----DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++PD V Y+T ++ + R K+A ++F+EM Y + PNLVTY LL ++G L E
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456
Query: 637 VQQCLAVYQD 646
+ L Q+
Sbjct: 457 ALKLLKSMQE 466
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 44/412 (10%)
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N N +K +E++ M + G ++ SYN ++ C GNT +A +++ K
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVF---K 217
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E G K DV TY+TI+ + A++ +ML G+ PN T++ +++
Sbjct: 218 KMEQNGC-KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCIL 276
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G + +A LF+EM+ P++ IL+ + A +F + T + +
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNI-ST 335
Query: 472 YDGNTD-----RISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF---------------- 509
Y+ D R+ N E K I P H Y+ F
Sbjct: 336 YNALMDGYCLQRLMN-EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEM 394
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGN 563
+ P T TY+ LM+ C + R K +N EM + GL PN ++++IL+D G+
Sbjct: 395 YHKALNPDTVTYSTLMQGLC-QFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ AL++LK M+E + P++V +T I+ + +L+ A LF ++ I+P + TY
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
+++ + G E +++ M G+ N +I +G +Q+++
Sbjct: 514 MIKGLLKEGLSDEAYD---LFRKMEDDGFLPNSCSYNVMI----QGFLQNQD 558
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ PT +T+N L+ C + +A L NEM G PN IS+ +I+ +GN
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ + K M ++G PDVV Y T I + + + A EM I PN+ TY ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
G L+E + ++++M + L L++ C EG++ +
Sbjct: 271 HGFCILGQLNEATR---LFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 55/323 (17%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG-EVKHLEAKGVLKLDVFTYSTI 369
V++ M + GV ++++YN L+ CL A++++ ++ A GV +Y+ +
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV-----HSYNIL 374
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F ++ A + +M + P+T+T+S+L+ G ++A+++F+EM G
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN +ILL + D A +L +S K +
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE------------------------ 470
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPN 547
PN V H++ IL++ K L +++ G+ P
Sbjct: 471 ----PNIV---HHT----------------ILIEGMFIAGKLEVAKELFSKLFADGIRPT 507
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T++I G + A + + M +DG P+ +Y I+ ++++ A L +
Sbjct: 508 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 567
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM + NL T+ LL S+
Sbjct: 568 EMVGKRFSANLSTFQMLLDLESQ 590
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 132/367 (35%), Gaps = 65/367 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V + + FA K + + + M GVT N + + LIN V+ A+ +
Sbjct: 88 VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILG 147
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDG 474
+M + G P + N L+ + A LF +S + G G
Sbjct: 148 KMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTG 207
Query: 475 NT----DRISNMEHKDKQSITNTPNFVPNS------------HYSSFDKRFSFKPTTTTY 518
NT D ME + T N + +S S R P TY
Sbjct: 208 NTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR-GIPPNVFTY 266
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C L EM + P+ ++ TIL+D G V A + + M E
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326
Query: 577 DGMSPDVVAYTT----------------AIKVCVR-------------------SKRLKQ 601
G+ P++ Y ++ +R S+R+ +
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A SL EM H + P+ VTY TL++ ++G ++ L ++++M G N
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFG---RPKEALNIFKEMCSYGLLPNLVTYSI 443
Query: 662 LIEEWCE 668
L++ +C+
Sbjct: 444 LLDGFCK 450
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++K M G++ ++ +Y+ILL C G+ A ++ +K ++ K L+ ++
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL---LKSMQEKK-LEPNIVH 475
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ +++ A ++A ++ + + G+ P T++ +I GL ++A LF +M
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G PNS N+++Q ++ A RL
Sbjct: 536 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 84/429 (19%)
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N F++L+N + K ++++ M K+G D+ +Y+ ++ C G+T +A ++
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL- 104
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS---- 403
+K +E KG K +V YSTI+ K A++ +M++ G++PN +T+SS
Sbjct: 105 --LKKMEEKGC-KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 404 -------------------------------LINACANAGLVEQAMHLFEEMLQAGCEPN 432
L++ + G++ +A +FE M++ G EPN
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 433 SQCCNILLQACVEACQFDRAFRLF------------RSWT-LSKTQVALGEDYDGNTDRI 479
N L+ Q D A +LF RS+ L K G D +
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR-IDEAKGLL 280
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
+ M HK + P T TY+ LMK C D A L+
Sbjct: 281 AEMSHK------------------------ALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EMR+ GL P+ ++++I++D G+++ A ++LK M+E + P++ YT I+
Sbjct: 317 EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFG 376
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+L+ A LF + IQP++VTY ++ + G +E + +++DM G N
Sbjct: 377 KLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE---LFRDMAVHGCLPNSC 433
Query: 658 YLKELIEEW 666
+I+ +
Sbjct: 434 TYNVIIQGF 442
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 359 LKLDVFTYSTIVKVF--ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
++ DV+T + ++ F ++ + A V +M G+ PN +T+S+L+N ++ +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDG 474
A+ LF+EM++ G EP+ + ++ + A +L + K V + Y
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV---YST 122
Query: 475 NTDRISNMEHKDKQSITNTPNFV---------PN-SHYSSFDKRFS-----------FK- 512
D + KDK IT F+ PN YSS F FK
Sbjct: 123 IIDSLC----KDKL-ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177
Query: 513 -------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T T+NIL+ + ++A + M G+ PN ++ L+D
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A ++ IM G +P V +Y IK +S R+ +A L EM H + P+ VTY T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 624 LLRARSRYGSLHEVQQCL 641
L++ + G + Q+ L
Sbjct: 298 LMKGFCQDGRPQDAQKLL 315
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ ++D G ++++ ++E + + V N+ +N+LM+ + + ++
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + SYNIL+K C +G A+ + E+ H L D TYST++K
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH----KALTPDTVTYSTLMK 300
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A K+ E+M S G+ P+ +T+S +++ G +++A L + M ++ EP
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
N IL+Q + + A LF + + Q
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
+++ + ++ + +T + +++LM D + ++ + M+ G++ D+ +Y+I+L
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G+ A E+ ++ E+K ++ ++F Y+ +++ + + A ++ ++
Sbjct: 335 DGLCKQGHLDEAFELLKAMQ--ESK--IEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +T++ +I+ GL +A LF +M GC PNS N+++Q +
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450
Query: 452 AFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
A RL R ++ + + D + + IS H Q
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQMLSDLESRDEIISLFMHGSSQG 493
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 510 SFKPTTTTYNILMKACCT---DYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +P T IL+ C D++ +++ M +GL PNH++++ L++ +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M + G PDV+ Y+T I + A L ++M+ +PN+V Y T++
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ + + E + L+ +M G N ++ +C
Sbjct: 125 DSLCKDKLITEAMEFLS---EMVNRGISPNVVTYSSILHGFC 163
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 178/401 (44%), Gaps = 59/401 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
IYE++ S ++ ++ F +L++ DL E++ M+ G++ + Y IL++ C
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A+ ++ ++ + GV +V+TY+T++ + + AL++ +DML G+
Sbjct: 229 SDNKIEEAESMHRAMREV---GVYP-NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLV 284
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+ LI+ G ++ A +LF M++ PN N L+ A + A L
Sbjct: 285 PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMAL 344
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F +RF P
Sbjct: 345 FLEL-----------------------------------------------ERFEVSPDV 357
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+IL++ C+ +A + +M G+ N +++ LID C G ++ AL+I
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E+G+ P+V+ ++T I + + L+ A ++ EM + P++VTY ++ +YGS
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ E L +Y DM G N + L++ C +G I D
Sbjct: 478 MKEA---LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 197/488 (40%), Gaps = 82/488 (16%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC- 269
+R IVP I++ +R + A + A ++ PN+Y T++D G C
Sbjct: 208 MRVKGIVPTV-IVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD--GYCK 264
Query: 270 -GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
+ ++ +Y+D+ + + ++ F L++ ++K ++ NM K V ++A
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN L+ A C G+ A ++ E++ E DVFTYS +++ + A +
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSP----DVFTYSILIRGLCSVSRTEEAGNIF 380
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E M G+ N++T++SLI+ C G +++A+ + +M + G EPN + L+ +
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
A ++ +
Sbjct: 441 RNLQAAMGIYSEMVIK-------------------------------------------- 456
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S P TY ++ C Y +K L ++M G++PN + + L+D G
Sbjct: 457 ---SLSPDVVTYTAMIDGHC-KYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512
Query: 564 VEGALQIL--KI--------MREDGMSPDV---VAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ AL++ KI + G P + VAYT I + + +A LF +M+
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWKAGYKANDTYLKELIEEWCEG 669
Y +QP+ V Y+ +LR L +V+ L ++ DM K G N L E + E
Sbjct: 573 RYGLQPDEVIYVVMLRG------LFQVKYILMMLHADMLKFGVIPNSAVHVILCECYQES 626
Query: 670 VIQDKNQN 677
QN
Sbjct: 627 GFLKSAQN 634
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 55/399 (13%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN 301
R Y+ + SP++ T+ID C GD ++++ +++++R + + + V+ L+
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGL 227
Query: 302 AHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
D K +++ M+++GV ++ +YN L+ C N A +Y + + +G++
Sbjct: 228 CSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY---QDMLGEGLV 284
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV T+ ++ + A + +M+ VTPN ++SLI+A G V +AM
Sbjct: 285 P-DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMA 343
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF E+ + P+ +IL++ + + A +F T
Sbjct: 344 LFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT------------------- 384
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
K+ I + TYN L+ CC + KAL +
Sbjct: 385 -------KEGIL---------------------ANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G+ PN I+++ LID N++ A+ I M +SPDVV YT I +
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+K+A L+ +M I PN T LL + G + +
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 149/340 (43%), Gaps = 31/340 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ + ++ID GD ++ A++ +L V+ +++ ++ L+ + +
Sbjct: 319 TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G++A+ +YN L+ CC G A EI + GV + +V T+ST++
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI---CSQMTENGV-EPNVITFSTLI 434
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + Q A+ + +M+ ++P+ +T++++I+ G +++A+ L+ +ML G
Sbjct: 435 DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGIT 494
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + LL + + A LF E + T R + K S+
Sbjct: 495 PNCYTISCLLDGLCKDGKISDALELFT------------EKIEFQTPRCNVDAGGSKPSL 542
Query: 491 TNTPNFVPNSHYSSFD-------------KRFSFKPTTTTYNILMKACCTDYYRVKALMN 537
TN + H D +R+ +P Y ++++ Y + L
Sbjct: 543 TNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHA 602
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M G+ PN IL + SG ++ A K + E+
Sbjct: 603 DMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 31/276 (11%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+VK Q+A + S+ TPN + LI LVE+A+ ++ + G
Sbjct: 88 LVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYH---KVG 142
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG---NTDRISNM 482
Q CN+LL V+ +F+ +R++ S LS + + G DG D +
Sbjct: 143 AALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQ 202
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E D+ + PT Y IL++ C+D +++ MR
Sbjct: 203 EMFDEMRVK------------------GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMR 244
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
VG+ PN ++ L+D N + AL++ + M +G+ PDVV + I + +K
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A +LF M + + PN+ Y +L+ A + G + E
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 195/428 (45%), Gaps = 37/428 (8%)
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDL 282
CN EFGK DL +++ ++ P+ + T+I G+C G+ +R + ++
Sbjct: 56 CN-AGEFGKALDLFQSMK-----REKRVEPDRWTYNTLIS--GLCSSGNTEGARKLLSEM 107
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R +N+ N++ ++S++ V + + +V + M G D+ ++N +++ + N
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGVTPNT 398
A+E+Y +H+ G K D +Y ++ A +LK+ +M +AG PN
Sbjct: 168 EKAREVY---QHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+S+LI+ G +E+A+ +F ML+AGC+PN L+ A + +A LF
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 459 WT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + VA G R +M+ +K Y +PT
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKR-GSMDEAEKL-------------YREMSGGAGLQPTI 329
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ C R L+ EM T GL+ + ++ ILI + ++ AL++ K
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MRE D V+ + + ++ + QA+++FE + PN T+ L + + G
Sbjct: 390 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 449
Query: 634 LHEVQQCL 641
+ + Q+ +
Sbjct: 450 VEDAQKLM 457
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 166/383 (43%), Gaps = 62/383 (16%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+V SL A L LEV++ M+ + + +YN+L+ + C AG A +++ +K
Sbjct: 15 FVVQSL--AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ D +TY+T++ + + A K+ +M + N T+SS+I +
Sbjct: 73 R---EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
E++ + EEM+ AGC P+ N ++Q + ++A +++ S
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES--------- 180
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---- 527
+KP +Y+IL+
Sbjct: 181 --------------------------------------GYKPDNVSYHILIHGLAKIGKL 202
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ ++ + M MR G PN I+++ LI +G +E AL++ M E G P+ Y
Sbjct: 203 DESLKILSEM-AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
TT I R++++ QA LFE+M I P+ V Y +L+ + GS+ E ++ +Y++
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK---LYRE 318
Query: 647 M-WKAGYKANDTYLKELIEEWCE 668
M AG + LI+ +C+
Sbjct: 319 MSGGAGLQPTIVTFNTLIDGFCK 341
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 173/392 (44%), Gaps = 58/392 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKAC 334
++E ++S++ ++ +N L+N NA + L+++++M++ V D +YN L+
Sbjct: 32 VFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGL 91
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C +GNT A+++ E++ + +VFTYS+I+K + + KV E+M++AG
Sbjct: 92 CSSGNTEGARKLLSEMRDKN----IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGC 147
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++ ++ A + +E+A +++ M+++G +P++ +IL+ + + D + +
Sbjct: 148 NPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 207
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + +VPN
Sbjct: 208 ILSEMAM------------------------------RAAGYVPN--------------- 222
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T++ L+ C KAL M G PN ++T LI + V A ++ +
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH-YQIQPNLVTYITLLRARSRY 631
M + + PD VAY + I + + +A L+ EM +QP +VT+ TL+ +
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
G L + +A +M G A+ + LI
Sbjct: 343 GKLGRANELVA---EMGTKGLAADTCTYRILI 371
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 183/438 (41%), Gaps = 65/438 (14%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + +R F G+K D + Y + P++ + T +D G+ K RAI
Sbjct: 491 IIYTSLIRNFFMHGRKED---GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED++S ++ ++ L++ A + T +++ M + G D +YN ++ C
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607
Query: 337 AGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G A E+ E VKH+ V TY +IV A A + E+ S G+
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPT------VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
N I +SSLI+ G +++A + EEM++ G PN N L+ A V+ + D A
Sbjct: 662 ELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI 721
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F+S K P
Sbjct: 722 CFQSM-----------------------------------------------KEMKCSPN 734
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TY+IL+ C Y + EM+ GL PN +++T +I GN+ A + +
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ +G PD ++ I+ + R +A+ +FEE + + N+ T I+LL A ++
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854
Query: 633 SLHEVQQCLAVYQDMWKA 650
L + AV ++ K+
Sbjct: 855 CLEQAAIVGAVLSEIAKS 872
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 192/440 (43%), Gaps = 42/440 (9%)
Query: 211 IRYACIVPRADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
++ +C+ P DI+ N + FGK + A + + K H P+ +++ V
Sbjct: 237 VKGSCLEP--DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKA 294
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMAS 326
G ++ ++ + ++ Y +N+++ +F + YK +++L G + + S
Sbjct: 295 GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD-DAYKLLERLRERGCIPSVVS 353
Query: 327 YNILLKACCLAGNTVLAQEI-YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+N +L CL + + + +V +AK ++ TY+ I+ + A A K+
Sbjct: 354 FNSIL--TCLGKKRKVDEALTLFDVMKKDAKP----NISTYNIIIDMLCMAGRVNEAYKI 407
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++M AG+ PN ++ + +++ A +E+A +FE + GC PNS L+ +
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGN----TDRISNM-EHKDKQSITNTPNFVPNS 500
+ D A+RLF L +D N T I N H K+ +
Sbjct: 468 KGKIDDAYRLFEKM--------LDAGHDANPIIYTSLIRNFFMHGRKE----------DG 509
Query: 501 H--YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
H Y +R +P T N M + + +A+ +M++ G P+ S++ILI
Sbjct: 510 HKIYKEMIRRGG-RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G I + M + G + D AY + +S ++ +A+ + EEMK + P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628
Query: 617 NLVTYITLLRARSRYGSLHE 636
+ TY +++ ++ L E
Sbjct: 629 TVATYGSIVDGLAKIDRLDE 648
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 184/448 (41%), Gaps = 66/448 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG---------DYMKSRAIYED 281
GKKR + AL +D KK + PN+ IID+ + G D M+ ++ +
Sbjct: 361 LGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 282 LRSQNVTLN-------------IYVFNSLMNVNAHDLKF---------------TLEVYK 313
L S N+ ++ I+ S N + + + +++
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M G A+ Y L++ + G +IY E+ + L L +T +
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL----LNTYMDCV 535
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A + + EDM S G P+ ++S LI+ AG + ++F+ M Q G ++
Sbjct: 536 FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA 595
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+ N ++ ++ + D+A+ + + + Y D ++ ++ D+
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT-YGSIVDGLAKIDRLDEA----- 649
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY----RVKA---LMNEMRTVGLSP 546
Y F++ K N+++ + D + R+ ++ EM GL+P
Sbjct: 650 --------YMLFEEA---KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 698
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +W L+DA + ++ AL + M+E SP+ Y+ I R ++ +AF +
Sbjct: 699 NVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 758
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSL 634
+EM+ + PN+VTY T++ ++ G++
Sbjct: 759 QEMQKQGLIPNVVTYTTMISGLAKVGNI 786
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F+P + Y +L+ A +AL + +M+ VG + +T L+ A G +
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E AL ++ ++ + PD+V Y I ++ + A+ F E+K + ++P+ V+Y ++
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287
Query: 625 LRARSRYGSLHEVQQ------------CLAVYQDM---WKAGYKANDTY--LKELIEEWC 667
+ + G L E ++ C Y M + + + +D Y L+ L E C
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D +RV + MR + P ++T+LI A + E AL++L+ M++ G V +T
Sbjct: 159 DAFRV---IGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFT 215
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T ++ R +++ A +L +E+K ++P++V Y + + GS V + ++
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS---VDMAWKFFHEL 272
Query: 648 WKAGYKANDTYLKELIEEWCEG 669
G + +D ++ C+
Sbjct: 273 KAHGLRPDDVSYTSMVWVLCKA 294
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 182/421 (43%), Gaps = 56/421 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + + R AL ++ K+ P++ IID+ G G + ++E++
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEM 179
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + Y +N+ + A + E++ M+ D +YN LL AG
Sbjct: 180 KAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAG-- 237
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
E +K +E+ G L ++ TY+ ++ F A A ++K+ M+S G+ P+ T
Sbjct: 238 -WYNEAANVLKEMESAGCLP-NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT 295
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++A + AG VEQAM ++ +M + C PNS N L+ + F +F
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF---- 351
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+D Q+ P+ V T+N
Sbjct: 352 ------------------------EDMQACGVEPDIV-------------------TWNS 368
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A + Y V + M+ G P+ ++ ILI+A G G+ + AL I M + G
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PD+ + T + R R + A + +E+ +PN + Y ++L A + G L +++
Sbjct: 429 CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLK 488
Query: 639 Q 639
+
Sbjct: 489 E 489
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 185/445 (41%), Gaps = 55/445 (12%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R G++ L + R + + ++ ++Y ++I + ++ +E ++
Sbjct: 89 LRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGP 148
Query: 288 TLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ +N ++++ + LE+++ M+ G+ D +YN + AC A
Sbjct: 149 QPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEAT 208
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ ++K D TY+ ++ V+ A W+ A V ++M SAG PN +T++ L
Sbjct: 209 ELFTQMKSSNCTP----DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNEL 264
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
++A AGL A + + M+ G EP+ LL A A + ++A ++
Sbjct: 265 LSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQ------ 318
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
T N PNS F+F I M
Sbjct: 319 --------------------------MRTSNCTPNS--------FTFNAL-----IGMHG 339
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++ + + +M+ G+ P+ ++W L+ A G +G L++ + M++ G PD
Sbjct: 340 KNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKA 399
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+ I+ R QA S+++ M P+L T+ TLL A +R G + L
Sbjct: 400 TFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL--- 456
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
++ ++ YK ND ++ + G
Sbjct: 457 DELNRSSYKPNDIAYASMLHAYANG 481
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 185/418 (44%), Gaps = 37/418 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ +++ G ++ IY +R+ N T N + FN+L+ ++ + F+ + +
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++MQ GV D+ ++N LL A G + E+ + ++ G + D T++ +++
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAF---GKNGMYSEVLKVFRGMKKAG-FEPDKATFNILIE 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + + ML AG TP+ T+++L+ A A G E A + +E+ ++ +P
Sbjct: 407 AYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKP 466
Query: 432 NSQCCNILLQACVEACQFDRAFR---------------LFRSWTLSKTQVALGEDYDGNT 476
N +L A + ++ L +++ L ++ +L D
Sbjct: 467 NDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSL---VDEAE 523
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSS--FDK---------RFSFKPTTTTYNILMKAC 525
D M H S T+T N + + + DK +P TYN LM
Sbjct: 524 DAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMY 583
Query: 526 CTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ Y + +A + E G +P+ +S+ +I + G + A +I M +G+ PD
Sbjct: 584 GREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDS 643
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y T + V +A S+ + M +P+ VTY TL+ A + G EV++ L
Sbjct: 644 FTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 183/464 (39%), Gaps = 77/464 (16%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
EL F LC ++ ++ I P + + + + + + A+ Y+ +
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV-FTYTSLLSAYSRAGKVEQAMEIYNQMRT 321
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT- 308
+PN + +I + G ++ + I+ED+++ V +I +NSL+ + ++
Sbjct: 322 SNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSE 381
Query: 309 -LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL----DV 363
L+V++ M+K G D A++NIL++A G++ A IY G+L+ D+
Sbjct: 382 VLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIY--------DGMLQAGCTPDL 433
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG----------- 412
T++T++ A W+ A + +++ + PN I ++S+++A AN G
Sbjct: 434 ATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDT 493
Query: 413 ------------------------LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
LV++A F M G ++ N ++ +
Sbjct: 494 LHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGM 553
Query: 449 FDRA---FRLFRSWTLSKTQVA----LGEDYDGNTDRISNMEHKDKQSITNTPNFVP--- 498
D+A F L RS L V +G R ++ + TP+ V
Sbjct: 554 MDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNT 613
Query: 499 -------NSHYSSFDKRF------SFKPTTTTYNILMKACCTD---YYRVKALMNEMRTV 542
+ SS + F +P + TYN + C + + +++ M
Sbjct: 614 VIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFV-GCYVNGGMFPEALSVVKHMHKT 672
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
G P+ +++ L+DA G E +ILK ++ + AY
Sbjct: 673 GCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAY 716
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 148/342 (43%), Gaps = 45/342 (13%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D T + ++++ ++ + + G + ++SLI+A + ++A+
Sbjct: 78 FRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEAL 137
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQ-FDRAFRLFR------------SWTLSKTQ 465
FE+M +AG +P+ N+++ + + ++ LF ++ + T
Sbjct: 138 GFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFK------------ 512
A G + T+ + M +S TP+ V N+ + K +
Sbjct: 198 CASGSLCEEATELFTQM-----KSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESA 252
Query: 513 ---PTTTTYNILMKA-----CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ A C +K + M + G+ P+ ++T L+ A +G V
Sbjct: 253 GCLPNIVTYNELLSAFGRAGLCNAAAEMK---DSMVSKGIEPDVFTYTSLLSAYSRAGKV 309
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A++I MR +P+ + I + ++K + +FE+M+ ++P++VT+ +L
Sbjct: 310 EQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSL 369
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
L A + G EV L V++ M KAG++ + LIE +
Sbjct: 370 LGAFGKNGMYSEV---LKVFRGMKKAGFEPDKATFNILIEAY 408
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 535 LMNEMR-TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ N MR +V P+ ++ +++ G + ++ K +RE+G DV AYT+ I
Sbjct: 68 VFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISAL 127
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
R+++ K+A FE+MK QP+LVTY ++ + G E L ++++M G +
Sbjct: 128 SRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE--NILELFEEMKAQGIQ 185
Query: 654 AND 656
++
Sbjct: 186 PDE 188
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 181/391 (46%), Gaps = 69/391 (17%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
LR + S + S ++Y T+I CG ++ + ++RS+ + N++ +++LMNV
Sbjct: 261 LRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNV 320
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHLE 354
A++L +VYK M + G ++ +YNIL+ K C +E + LE
Sbjct: 321 CIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQW-------EEAVKVLDTLE 373
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K ++ +V TY+T++ + + ALKV E ML+AGV P+ T+++LI+A G V
Sbjct: 374 -KQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQV 432
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+A+ +F +M++ GCE N + L+ AC +A +++ A LF
Sbjct: 433 EKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELF------------------ 474
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
S M HK+ + KP T+N L+ AC + KA
Sbjct: 475 -----SKM-HKE-----------------------NCKPNVVTFNSLIAACSHGGHWEKA 505
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L +M+T G P+ I++ LI A G AL+ + M+ G PD + + ++V
Sbjct: 506 SELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEV 565
Query: 593 CVRS------KRLKQAFSLFEEMKHYQIQPN 617
+S + Q ++L H++I N
Sbjct: 566 LWQSGVLLAQSKALQLWTLANRSGHFRIYTN 596
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 24/376 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK--LDVFTYSTIVKVFADAKWWQ 380
D ++ LLK G A EI+ +++LE L D++TY+T++ + +
Sbjct: 234 DSSAMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLR 293
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M S G+ N T+S+L+N C A ++ A ++++ML+ GC PN NIL+
Sbjct: 294 RALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILI 353
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
V+ CQ++ A ++ TL K Q E NT + + +K Q P
Sbjct: 354 DVYVKRCQWEEAVKVLD--TLEK-QAIQAEVRTYNT--VISACNKSGQ---------PEQ 399
Query: 501 HYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILID 556
++K + KP+ TTY L+ A KAL +M G N I+++ LI
Sbjct: 400 ALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLIS 459
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
AC +G E AL++ M ++ P+VV + + I C ++A LFE+M+ +P
Sbjct: 460 ACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKP 519
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKN 675
+ +TY L+ A R G + ++ L ++ M G + L+E W GV+ ++
Sbjct: 520 DSITYCGLITAYERGG---QWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQS 576
Query: 676 QNQGEVTLCRRTNSQR 691
+ TL R+ R
Sbjct: 577 KALQLWTLANRSGHFR 592
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 169/393 (43%), Gaps = 20/393 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV-FNSLMNVNAHDL-KFTLEV 311
PN+ T I CG G + + E++ + V N ++ D + + V
Sbjct: 317 PNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSV 376
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++M + GV A+ Y + +KAC A E+ ++ +E GV + V Y +
Sbjct: 377 LRSMSEAGVAAEAKCYAVTIKACGRGRRWARALEL---LREMEKNGVEPI-VMGYDACIA 432
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCE 430
D K W+ A+ + +M + GVTP +++S I AC + + A+ L EM Q AG
Sbjct: 433 ACGDGKQWEQAVALLREMPTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGIN 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ C N + A Q++ A L R ++G + ++ D
Sbjct: 493 PDAVCYNNCMTALGRGLQWEMALTLLRE------MPSVGLPIKAQSYTVAIKACGDAGE- 545
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
P + S P +Y + AC + + L+ EM ++G+SPN
Sbjct: 546 -GKPAV---ALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPND 601
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++T I ACG SG E AL +L+ M G P++ +YT IK C + ++A LF E
Sbjct: 602 RTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACGNGGQWERAVELFRE 661
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ Y ++A G++ + + L
Sbjct: 662 LPSAGITADVQAYNACVQACGNSGAVDQAVELL 694
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 200/464 (43%), Gaps = 42/464 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY---ICRTIIDVCGICGDYMKSRAIYE 280
F +++ G +RD A R ++ L P + +C +++ G + +
Sbjct: 182 FMRRLQQAGMRRDCDEAERVL---RQALECPGVVDTVMCNAVLNTFAADGRWQVVLEVMR 238
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+R +T + + + + + + ++ + K M GV + Y + AC ++G
Sbjct: 239 QMREAGLTPDALTYTNAIKACGKGREWRRSVALLKEMSAHGVELNSIHYVCAMTACKISG 298
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ E G ++ ++A G+ + +V Y+T + ++A+ + E+M + GV PNT
Sbjct: 299 ---MGAEAVGLLREMQAAGI-EPNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNT 354
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T + + A + EQA+ + M +AG ++C + ++AC ++ RA L R
Sbjct: 355 QTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWARALELLRE 414
Query: 459 WTLSKTQ-VALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFS 510
+ + + +G D DG + ++ ++ TP V SH ++ + +
Sbjct: 415 MEKNGVEPIVMGYDACIAACGDGKQWEQAVALLREMPTVGVTPTVVSYSHAIAACGQSYQ 474
Query: 511 FKPT----------------TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+KP YN M A + L+ EM +VGL S+T
Sbjct: 475 WKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYT 534
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ I ACG +G + A+ +L+ M+ E + P+V++YT AI C + + KQA L EM
Sbjct: 535 VAIKACGDAGEGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMAS 594
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ PN TY + A G E L++ ++M G N
Sbjct: 595 MGVSPNDRTYTAAITACGNSGKWEEA---LSLLREMPTMGADPN 635
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 142/325 (43%), Gaps = 27/325 (8%)
Query: 254 PNMYICRTIID---VCGICGDYMKSRAIYEDLR--SQNVTLN--IYVFNSLMNVNAHDLK 306
P + + T++ CG + + E LR Q +N +N+ M L+
Sbjct: 451 PTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQ 510
Query: 307 F--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ L + + M +G+ SY + +KAC AG A + ++ ++A+ + +V
Sbjct: 511 WEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVAL---LREMQAELSVPPNVI 567
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ + W+ AL++ +M S GV+PN T+++ I AC N+G E+A+ L EM
Sbjct: 568 SYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLREM 627
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
G +PN ++AC Q++RA LFR S A + Y+ N
Sbjct: 628 PTMGADPNIASYTATIKACGNGGQWERAVELFRE-LPSAGITADVQAYNACVQACGNSGA 686
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTD---YYRVKALMNEMR 540
D Q++ P + +P TYN + AC C D + + L+ EM
Sbjct: 687 VD-QAVELLREMAPAA---------GLEPNVFTYNAALMACSCPDGGRWGKALELLEEMA 736
Query: 541 TVGLSPNHISWTILIDACGGSGNVE 565
G++PN ++ + ACG G E
Sbjct: 737 WRGIAPNAVTHESALAACGERGRDE 761
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 158/349 (45%), Gaps = 55/349 (15%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
++Y TII CG K+ + ++R V N++ +++LMNV A++L+ L+VY
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + G ++ +YNIL+ GN QE + LE +G K +V TY+TI+
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNW---QEAVQVLDALEDQGT-KPEVRTYNTILSA 187
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + AL+V E ML+ G P T+++LI+A G +E+A+ +F++M++ GCE N
Sbjct: 188 CNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERN 247
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ L+ AC +A ++ A L + H+D
Sbjct: 248 VITYSSLISACEKAGRWQLALELL------------------------DEMHRD------ 277
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ KP T T+N L+ AC + + + +M + G P+ +S
Sbjct: 278 -----------------NCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVS 320
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ ILI A ALQ L M+ G PDV Y I+ RS L
Sbjct: 321 YAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVL 369
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 55/366 (15%)
Query: 290 NIYVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++Y + ++++ +H L+ LE+ M+ GV+ ++ +Y+ L+ C A LA ++Y
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G+ L +G ++ TY+ ++ + WQ A++V + + G P T++++++A
Sbjct: 132 GQ---LLREGCTP-NLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSA 187
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C +G E A+ ++E ML G +P + L+ A + + + A R+F+
Sbjct: 188 CNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMV------- 240
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
R + TY+ L+ AC
Sbjct: 241 ----------------------------------------RRGCERNVITYSSLISACEK 260
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ L++EM PN +++ L+ AC G + A + + M G PD V+
Sbjct: 261 AGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVS 320
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I R + +A +EM+ +P++ Y ++ A +R G L + ++Q
Sbjct: 321 YAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQ 380
Query: 646 DMWKAG 651
+ G
Sbjct: 381 AATRQG 386
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 136/327 (41%), Gaps = 59/327 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV+TY+TI+ + + AL++ +M GV N T+S+L+N C A +E A+ ++
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++L+ GC PN NIL+ + + A ++ D D+ +
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVL----------------DALEDQGTK 175
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
E + TYN ++ AC AL M
Sbjct: 176 PEVR-------------------------------TYNTILSACNRSGQPEHALRVYERM 204
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P ++T LI A G +G +E AL+I + M G +V+ Y++ I C ++ R
Sbjct: 205 LADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRW 264
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ A L +EM +PN VT+ LL A ++ G Q V++ M G K +
Sbjct: 265 QLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQD---VFEQMPSCGCKPDAVSY 321
Query: 660 KELIE------EWCEGV-IQDKNQNQG 679
LI +WC + D+ Q QG
Sbjct: 322 AILISAFDRGNQWCRALQALDEMQGQG 348
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L AL Y + +PN+ +ID+ G G++ ++ + + L Q +
Sbjct: 120 KANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVR 179
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N++++ + + L VY+ M G +Y L+ A G A I+ ++
Sbjct: 180 TYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDM 239
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +V TYS+++ A WQ+AL++ ++M PNT+T+++L++ACA
Sbjct: 240 ----VRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQ 295
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
G + A +FE+M GC+P++ IL+ A Q+ RA +
Sbjct: 296 GGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQ 339
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 528 DYYRVKALMNEMRTVGLS--------------PNH--------ISWTILIDACGGSGNVE 565
D + AL+ E+ VGLS NH ++T +I CG +
Sbjct: 31 DSRALAALLKELHKVGLSNRASELFDWLRSLPDNHELAHLCDVYTYTTIISQCGSHQQLR 90
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+++ MR G+ +V Y+ + VC+++ L+ A ++ ++ PNLVTY L+
Sbjct: 91 KALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILI 150
Query: 626 RARSRYGSLHEVQQCLAVYQD 646
+ G+ E Q L +D
Sbjct: 151 DIHGKMGNWQEAVQVLDALED 171
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 171/400 (42%), Gaps = 45/400 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ ++Y +++L+ DL+ +V + M++ G ++ +YN L+ C AG
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E +G K +E G++ D FTY I+ A + ++M AG+ PN +
Sbjct: 294 I---EEAFGYKKEMEDYGLVP-DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+S+LI+ G ++A + +EM AG +PN + L++ + + RA R+ +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-------- 511
T +I M T T N V H +K +F
Sbjct: 410 T-----------------KIGYMAD------TMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446
Query: 512 ---KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TY+I++ C + R L+ +M GL PN + LI G+
Sbjct: 447 GGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSL 506
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + LK M + ++PD+ Y + I ++ +A ++EM QPN TY L+
Sbjct: 507 ACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIH 566
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
S G+L + +Q L M +G ND +++E +
Sbjct: 567 GYSMAGNLEKAEQLL---HQMLNSGLNPNDFIYAQILEGY 603
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 38/399 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++R ++ N+Y ++ ++N + + + + M G+ + Y L+ C
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ LA E ++ + L D++ Y++++ ++ A++ ++ML G
Sbjct: 500 REGSFSLACETLKKM----TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQ 555
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+ LI+ + AG +E+A L +ML +G PN +L+ ++ ++
Sbjct: 556 PNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSST 615
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ----SITNTPNFVPNSH-YSSFDKRF- 509
+S L K + Y +S+ H S+ VP+S Y S F
Sbjct: 616 LKSM-LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674
Query: 510 ------------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+P + YN L+ C D + + N + GL PN +
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID +G++ A+ + M +G++PD Y+ C S L+QA + EEM
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794
Query: 610 --KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ Y I + ++ TL+ + G L E + L V D
Sbjct: 795 IARGYAI---ISSFNTLVHGFCKRGKLQETVKFLHVMMD 830
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 181/431 (41%), Gaps = 36/431 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ + T+ID G+ ++ I +++ + V N +++L+ + +
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M K+G MAD +YN++++ N A + E++ KG + +V+TYS I+
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMR----KGGISPNVYTYSIIIN 461
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + E M++ G+ PN ++ LI+ G A ++M + P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521
Query: 432 NSQCCNILLQACVEACQFDRAF--------RLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+ C N L+ + D A + F+ + + G GN ++ +
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
H+ S N +F+ + K + + ++T + M G
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSST------------------LKSMLEKG 623
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P++ + I+I SG+++ A+ +L ++ ++G+ PD + Y + I ++ +++A
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L +EM I+P + Y L+ + ++ ++ + G N LI
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDG---FCKSDDISHARNIFNSIICKGLPPNCVTYTTLI 740
Query: 664 EEWCE-GVIQD 673
+ +C+ G I+D
Sbjct: 741 DGYCKAGDIRD 751
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 168/397 (42%), Gaps = 34/397 (8%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
H+ + + M+K G+ ++ +Y+I++ C G + A G ++ + A G LK +
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS---GLLEQMIADG-LKPN 487
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
F Y+ ++ + + +A + + M +TP+ ++SLI +N G +++A+ ++
Sbjct: 488 AFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYD 547
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDG 474
EML+ G +PN L+ A ++A +L S Q+ G
Sbjct: 548 EMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSD 607
Query: 475 NTDRISN---------MEHKDKQSITNTPNFVPNSHYS------SFDKRFSFKPTTTTYN 519
N +++S+ + ++ N + H S ++ P + Y
Sbjct: 608 NLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYG 667
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C D + L++EM G+ P + LID S ++ A I +
Sbjct: 668 SLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK 727
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ V YTT I ++ ++ A L+ EM + P+ Y L S G L
Sbjct: 728 GLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDL--- 784
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
QQ L + ++M GY ++ L+ +C+ G +Q+
Sbjct: 785 QQALFITEEMIARGYAIISSF-NTLVHGFCKRGKLQE 820
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 27/291 (9%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV+ M AG++P+ T+S+LI A +E A + EEM + GC N N L+
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 444 VEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHK---DKQSITN-TPNF 496
A + AF + + L G +G R + K D+ S PN
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
V YS+ F + + + +++ + EM G+ PN I++ LI
Sbjct: 349 V---VYSTLIDGF-----------MRQGNADEAFKI---VKEMSAAGVQPNKITYDNLIR 391
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + A +ILK M + G D + Y I+ +R ++AF L EM+ I P
Sbjct: 392 GLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISP 451
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
N+ TY ++ + G E ++ + + M G K N LI +C
Sbjct: 452 NVYTYSIIINGLCQIG---ESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + P TY+ L++A C D K ++ EMR G S N +++ LI +
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A K M + G+ PD Y I + R QA L +EM + PN+V Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TL+ R G+ E + ++M AG + N LI C+
Sbjct: 352 STLIDGFMRQGNADEA---FKIVKEMSAAGVQPNKITYDNLIRGLCK 395
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 517 TYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
TYN L+ C R A+ EM GL P+ ++ +I+ G + A +
Sbjct: 280 TYNTLIGGLC----RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCL 335
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G+ P+VV Y+T I +R +AF + +EM +QPN +TY L+R +
Sbjct: 336 LDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCK 395
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ----------GE 680
G + + L + M K GY A DT L+ EG ++ N+ + G
Sbjct: 396 LGRMGRASRIL---KQMTKIGYMA-DTMTYNLV---IEGHLRQHNKEEAFLLLNEMRKGG 448
Query: 681 VT------------LCRRTNSQRPQSLLLEKVAVHLQKSA 708
++ LC+ S+R LL + +A L+ +A
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 190/454 (41%), Gaps = 56/454 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYIC---RTIIDVCGICGDYMKSR 276
I + V K D VSAL ++ H+ PN+ I R + G C S
Sbjct: 215 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK-PNVVIWPLERRTCMINGFCSSGRWSE 273
Query: 277 A---IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
A + E L + ++ ++ +N+L+N + KF E+Y M G++ +Y+ ++
Sbjct: 274 AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMI 333
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A+ ++ +L A D+ T++T++ + AK +K+ +M
Sbjct: 334 DGFCKQNRLDAAEHMF----YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG+ NTIT+++LI+ G + A L +EM+ +G PN CN LL + +
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +F++ SK + ++G
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNG------------------------------------V 473
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I++ +I ++ A Q
Sbjct: 474 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQ 533
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 534 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFR 593
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G+ + L ++Q+M +G + ++ ++
Sbjct: 594 KVGN---INGALDIFQEMMASGVYPDTITIRNML 624
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 169/422 (40%), Gaps = 45/422 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
D + GD ++SR + ++ F LM V L + +++ M+ V
Sbjct: 61 DAIDLFGDMVRSRPLP----------SVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ S+ IL+K C A +G++ L V T+ST++
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLG----FHPTVVTFSTLLHGLCVEDRISE 166
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL D+ PN +T+++L+N G V +A+ L + ML+ G +PN ++
Sbjct: 167 AL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ A L R E+ + + + + N F +
Sbjct: 223 GMCKMGDTVSALNLLRKM----------EEVSHIKPNVVIWPLERRTCMIN--GFCSSGR 270
Query: 502 YSSFDK-------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWT 552
+S + R P TYN L+ A + ++ + L +EM G+ P+ I+++
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYS 330
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID ++ A + +M G SPD++ + T I R+KR+ L EM
Sbjct: 331 SMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA 390
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVI 671
+ N +TY TL+ + G L+ Q L Q+M +G N L++ C+ G +
Sbjct: 391 GLVANTITYTTLIHGFCQVGDLNAAQDLL---QEMVSSGVCPNVVTCNTLLDGLCDNGKL 447
Query: 672 QD 673
+D
Sbjct: 448 KD 449
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 223 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 282
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 283 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 343 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 455
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 456 --------------------------DEMRESNCPL------------------GTTTYN 471
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 592 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 637
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 26/366 (7%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + Q +G+ + L+ + A A+ ++ E G +K Y+
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLE---FFLAGEIKPRTRAYN 296
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K + + A +V ++M GV P+ T+S L++A AG E A L +EM
Sbjct: 297 ALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 356
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +P+S + +L + ++ +AF + R S + DR H
Sbjct: 357 GVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR----------PDR-----HFYN 401
Query: 488 QSITNTPNFVPNSH-YSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
I + H +FD+ +P T+N L+ A C + R L +EMR
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
++ I+I+ G EG +L M+E G+ P+++ YTT + V RS R K+A
Sbjct: 462 NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEA 521
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
E MK ++P+ Y L+ A ++ G L V + M G +A+ L L
Sbjct: 522 VDCIEAMKADGLKPSPTMYHALVNAYAQRGL---ADHALNVVKAMRADGLEASTVVLNSL 578
Query: 663 IEEWCE 668
I + E
Sbjct: 579 INAFGE 584
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L + LA VK + A G L+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 572
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 632
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 633 MITSGCAPDRKARAMLRSA 651
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 59/444 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + +++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I+ ++ ++A F M P++ TY +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLV 519
Query: 646 DMWKAGYKANDTYLKELIEEWCEG 669
D +G N IE + +G
Sbjct: 520 D---SGIPRNRDTFNAQIEAYKQG 540
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 191/463 (41%), Gaps = 52/463 (11%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + +I +N+L++ A L E V++ M G++ D+ +Y+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV-- 289
Query: 334 CCLAGNTVLAQEIYGEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
E +G+++ LE A G D+ +Y+ +++ +A + + A+
Sbjct: 290 -----------ETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +AG TPN T+S L+N +G + LF EM + +P++ NIL++
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNS 500
E F LF + + E Y+G H+D + I + VP+S
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDM-ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 501 H-YSSFDKRF-------------------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
Y+ + F P+ TY+ L+ + +A+++
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G+ N ++ I+A G E A++ M + PD + V ++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + FEEMK I P+++ Y +L + +V + L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 54/346 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G E++ E + ++GV +
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDE---MPSQGVSR-S 175
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ + M + ++P+ +T++++INACA GL E + LF
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLF 235
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +FR+ DG
Sbjct: 236 AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN------------DGGI----- 278
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
P+ SH T+ L + +V L++EM +
Sbjct: 279 -----------VPDLTTYSHL------------VETFGKLRR-----LEKVSDLLSEMAS 310
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +L++A SG+++ A+ + M+ G +P+ Y+ + + +S R
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
LF EMK P+ TY L+ G EV + ++ DM
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV---VTLFHDM 413
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 55/304 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N DK S P+ TYN ++ AC D+ + L
Sbjct: 202 MKN----DKIS-----------------------PSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG N
Sbjct: 295 LRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAGCTPN 351
Query: 656 -DTY 658
+TY
Sbjct: 352 ANTY 355
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 176/408 (43%), Gaps = 66/408 (16%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLK 306
SPN+Y +I G C G+ K + ++ N+ +N+L++ + D
Sbjct: 7 SPNVYTYNILIR--GFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F L K+M G+ ++ SYN+++ C G+ A EI E+ + KG D TY
Sbjct: 65 FGL--LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY---KGFTP-DEVTY 118
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + AL + +M+ GV+P+ +T+++LIN+ A + +AM F++M
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN + L+ + A+R+ T S
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES------------------------ 214
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
F P+ TYN + C +AL + EM GL
Sbjct: 215 -----------------------GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ +S++ +I G ++ A Q+ + M E G+SPD V Y++ I+ +RL +A
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
L +EM + P+ TY TL+ A G L+ + L ++ +M G+
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLN---KALHLHDEMIHKGF 356
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 56/351 (15%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ +YNIL++ C G +GE +E G L +V TY+T++ +
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGE---MERNGCLP-NVVTYNTLIDAYCKMGRI 61
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A + + M S G+ PN I+++ +IN G +++A + EEM G P+ N L
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
L + F +A +
Sbjct: 122 LNGYCKEGNFHQALVIHAEMV--------------------------------------- 142
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
R P+ TY L+ + C + R ++MR GL PN ++T LID
Sbjct: 143 --------RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A +IL M E G SP VV Y I +R+++A + +EM + P+
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+V+Y T++ R G E+ + + Q+M + G + LI+ CE
Sbjct: 255 VVSYSTIISGFCRKG---ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 188/470 (40%), Gaps = 54/470 (11%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F +L L + +++ PN+ T+ID G ++ + + + S+
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N+ +N ++N +K E+ + M G D +YN LL C GN A
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I+ E+ + + V TY+ ++ A+ A++ + M G+ PN T+++L
Sbjct: 136 VIHAEM----VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW----- 459
I+ + GL+ +A + EM ++G P+ N + + + A + +
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 460 ---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S + + G G DR M KQ + P
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQM----KQEMVEK----------------GVSPDAV 291
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ C +A L EM +GL P+ ++T LI+A G++ AL + M
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY--- 631
G PD V Y+ I + R ++A L ++ + + P+ VTY TL+ S
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411
Query: 632 ------------GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
G +HE + V++ M + +K + +I C G
Sbjct: 412 SVVALIKGFCMKGLMHEADR---VFESMVERNHKPGEAVYNVIIHGHCRG 458
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 167/412 (40%), Gaps = 71/412 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R+L A+ +D + PN T+ID G ++ I ++ + ++
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 293 VFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+ ++ + ++ L V + M + G+ D+ SY+ ++ C G A ++ E
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE- 280
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ KGV D TYS++++ + + A + ++ML G+ P+ T+++LINA
Sbjct: 281 --MVEKGV-SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A+HL +EM+ G P++ ++L+ + + A RL ++ V
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES-VPSDV 396
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
YD + SN+E FK L+K C
Sbjct: 397 TYDTLIENCSNIE---------------------------FKSVVA----LIKGFC---- 421
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+K LM+E A ++ + M E P Y I
Sbjct: 422 -MKGLMHE----------------------------ADRVFESMVERNHKPGEAVYNVII 452
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R L +AF+L++EM H P+ VT ITL++A + G E+ + +
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R P TYNIL++ C+ K L EM G PN +++ LIDA G ++
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +LK M GM P++++Y I R +K+A+ + EEM + P+ VTY TLL
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G+ H Q L ++ +M + G + LI C+
Sbjct: 123 NGYCKEGNFH---QALVIHAEMVRNGVSPSVVTYTALINSMCK 162
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMA 322
G C GD K+ A++ D+ S+ + N + ++++ + +E +K + L +
Sbjct: 348 GYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFL 407
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYNI++ A C A + E+K + + +D+ Y+T++ + A
Sbjct: 408 DEVSYNIVVDALCKLEKVDQAVALLDEMKGKQ----MDMDIMHYTTLINGYCHVGKLVDA 463
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+V E+M G+ P+ +T++ L+ A + GL +A+ L+E M +PN+ N++++
Sbjct: 464 FRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEG 523
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ A F + + ++Y +H +K S +
Sbjct: 524 LCIGGKVTEAEAFF--CNMEDKSI---DNYGAMITGYCEAKHTEKAS----------ELF 568
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+R Y +L K C + R L+ M + + P+ + +I AC +
Sbjct: 569 FELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRA 628
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + I+R+ G++PD+ YTT I VC R RL +A +LF++MKH I+P+LVT+
Sbjct: 629 GDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTF 688
Query: 622 ITLL 625
LL
Sbjct: 689 TVLL 692
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 186/460 (40%), Gaps = 61/460 (13%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKF 307
HL +P++ II + G + +I+ L N + + L++ + H +
Sbjct: 89 HLKNPDIPAYAAIIRILCHWGLHKMLHSIFLHLHQNNNDFTSFDISHLLDTLSLPHHIDI 148
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE ++ + Y+ L+K+ AG + E + ++ +G L +FT++
Sbjct: 149 DLEKEDTVKHRSSFL-IQVYDALVKSYVTAG---MLDEAINALFQIKRRGFLP-HIFTFN 203
Query: 368 TIV-KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ K+ A+ K AL + + + S G+ PN T+S +I A G + +A ++F+EM
Sbjct: 204 YLMNKLIANGKV-DAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMEL 262
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN+ ++ + D +++ ++W + + Y N D
Sbjct: 263 CGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYA-YVAVIRGFCNEMKMD 321
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + +K+ Y+ L++ C D + AL N+M + G+
Sbjct: 322 RAEVV----------LGDMEKQ-ELISDARCYSELIRGYCKAGDLSKALALHNDMESKGI 370
Query: 545 SPN-----------------------------------HISWTILIDACGGSGNVEGALQ 569
N +S+ I++DA V+ A+
Sbjct: 371 KTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVA 430
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M+ M D++ YTT I +L AF +FEEM+ ++P++VT+ LL A S
Sbjct: 431 LLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFS 490
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
R G +E L +Y+ M K N +IE C G
Sbjct: 491 RRGLANEA---LKLYEYMKSQDLKPNAITHNVMIEGLCIG 527
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 160/415 (38%), Gaps = 89/415 (21%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN LMN + + L +YK ++ LG+ + +Y+I++KA C G+ V A ++
Sbjct: 198 HIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVF 257
Query: 348 GEVK-------------HLEA------------------KGVLKLDVFTYSTIVKVFADA 376
E++ ++E +G + +DV+ Y +++ F +
Sbjct: 258 QEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNE 317
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A V DM + + +S LI AG + +A+ L +M G + N
Sbjct: 318 MKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIV 377
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ +LQ E + F+ + ++ L E
Sbjct: 378 STILQYFCEKGMHSQVVEEFKRF--KDLRIFLDE-------------------------- 409
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
+YNI++ A C + AL++EM+ + + + +T L
Sbjct: 410 -------------------VSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTL 450
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ G + A ++ + M G+ PDVV + + R +A L+E MK +
Sbjct: 451 INGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDL 510
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+PN +T+ ++ G + E + +D K+ D Y +I +CE
Sbjct: 511 KPNAITHNVMIEGLCIGGKVTEAEAFFCNMED------KSIDNY-GAMITGYCEA 558
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
S +MY +I C GD + A+++ LR +T +I+ + +++NV + L
Sbjct: 614 SKDMY--GKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARN 671
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M+ G+ D+ ++ +LL G +K + + + F
Sbjct: 672 LFQDMKHRGIKPDLVTFTVLLD---------------GHLKRVHS------EAFARKRKE 710
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + W+ +M + + P+ I +++LI+ +E A+ L++EM+ G E
Sbjct: 711 VNLAASNIWK-------EMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVE 763
Query: 431 PNSQCCNILLQAC 443
P+ C LL C
Sbjct: 764 PDRATCTALLSGC 776
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 136/346 (39%), Gaps = 44/346 (12%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G C G + + ++E++ + + ++ FN L+ + L++Y+ M+ +
Sbjct: 453 GYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKP 512
Query: 323 DMASYNILLKACCLAGNTVLAQEI------------------YGEVKHLEA--------- 355
+ ++N++++ C+ G A+ Y E KH E
Sbjct: 513 NAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNYGAMITGYCEAKHTEKASELFFELS 572
Query: 356 -KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+L + Y + K+ + + AL + + ML + P+ + +I AC AG +
Sbjct: 573 ERGLLMDRGYIYKLLEKLCEEGEK-DRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDM 631
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGED 471
A +F+ + ++G P+ ++ C + A LF+ + V
Sbjct: 632 RNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVL 691
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
DG+ R+ + K+ N + S+ + +P Y L+ C R
Sbjct: 692 LDGHLKRVHSEAFARKRKEVN----LAASNIWKEMQNTEIRPDVICYTALIDGHCK-VDR 746
Query: 532 VK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ L +EM G+ P+ + T L+ C G+V+ L L ++
Sbjct: 747 LEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLNLI 792
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+++ G P+ ++ L++ +G V+ AL I K ++ G++P+ Y+ IK R
Sbjct: 189 QIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKG 248
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA-----RSRYGSLHEVQQCLAVYQDMWKAGY 652
L +A ++F+EM+ + PN Y T + RS +G ++V Q WK G
Sbjct: 249 SLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFG--YQVLQA-------WKEGN 299
Query: 653 KANDTYLK-ELIEEWCEGVIQDKNQ 676
D Y +I +C + D+ +
Sbjct: 300 IPIDVYAYVAVIRGFCNEMKMDRAE 324
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 223 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 282
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 283 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 343 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 455
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 456 --------------------------DEMRESNCPL------------------GTTTYN 471
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 592 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 637
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 26/366 (7%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + Q +G+ + L+ + A A+ ++ E G +K Y+
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLE---FFLAGEIKPRTRAYN 296
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K + + A +V ++M GV P+ T+S L++A AG E A L +EM
Sbjct: 297 ALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 356
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +P+S + +L + ++ +AF + R S + DR H
Sbjct: 357 GVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR----------PDR-----HFYN 401
Query: 488 QSITNTPNFVPNSH-YSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
I + H +FD+ +P T+N L+ A C + R L +EMR
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
++ I+I+ G EG +L M+E G+ P+++ YTT + V RS R K+A
Sbjct: 462 NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEA 521
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
E MK ++P+ Y L+ A ++ G L V + M G +A+ L L
Sbjct: 522 VDCIEAMKADGLKPSPTMYHALVNAYAQRGL---ADHALNVVKAMRADGLEASTVVLNSL 578
Query: 663 IEEWCE 668
I + E
Sbjct: 579 INAFGE 584
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L + LA VK + A G L+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 572
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 632
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 633 MITSGCAPDRKARAMLRSA 651
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 195/447 (43%), Gaps = 59/447 (13%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N +R+ K + + Y + + P++Y +I GD +K + + ++ +
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N++ +N+ + + LEV K M + G+ D +Y +L+ C + A
Sbjct: 272 -CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + + + G L + FTY+ ++ F + AL++K++M++ G+ N +T+++
Sbjct: 331 KLIF---ESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I A AG + +AM LF EML AG EP++ N+L+ +++ +A L K
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
P+ TY++L+
Sbjct: 447 -----------------------------------------------LTPSPFTYSVLIS 459
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +D + ++++M G+ PN + LI A E A+++LKIM +G+ P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+ Y I R+K++++A L +M I+PN TY + S+ G E+Q
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG---EIQVAE 576
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
++DM +G N+ LI+ C+
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCD 603
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 188/435 (43%), Gaps = 67/435 (15%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K D+ A K +P+ + +I G+C D K+ + + + V N
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLIS--GLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++++ +L+ + ++ +E+ K M GV+ D+ YN L+ C A A+ +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML-- 543
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + KG+ K + TY + +++ + Q+A + +DMLS+G+ PN + ++ LI
Sbjct: 544 -LVDMGEKGI-KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ G +A+ F+ ML+ G P+ + + ++ + + + A +F + KT V
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL--KTGV-- 657
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSFK--------------- 512
P+ F+ NS S F K +
Sbjct: 658 ------------------------VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693
Query: 513 PTTTTYNILMKACCTDYYRVKA--------LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P YN L+ DY K+ L +EM + G+SP+ + ILID CG GN+
Sbjct: 694 PNIVVYNTLI----NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E AL + ++ + + A+ + I + ++ +A LF++M ++ PN+VTY L
Sbjct: 750 EKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808
Query: 625 LRARSRYGSLHEVQQ 639
+ A + + E +Q
Sbjct: 809 IDAYGKAEMMEEAEQ 823
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 178/410 (43%), Gaps = 44/410 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + D+ + + N + + + +N+ + +++ +K+M G++ + Y IL+
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K C GNTV A + K + KG++ D+ YS I+ + + A+ V L
Sbjct: 599 KGHCDVGNTVEALSTF---KCMLEKGLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ--ACVEACQF 449
GV P+ ++SLI+ G +E+A L++EML G PN N L+ ++
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNMEHKDKQSITNTPNFVPNS 500
AF+LF +SK G Y +GN ++ ++ H+ +Q
Sbjct: 715 TEAFKLFDE-MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-------- 765
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+ + +N L+ + C ++A L ++M L+PN +++TILIDA
Sbjct: 766 -------------SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 812
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + +E A Q+ M + P+ + YT+ + + + SLF++M+ I +
Sbjct: 813 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 872
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ Y + A + G E L + G K D LI C+
Sbjct: 873 IAYGVMASAYCKEGKSLEA---LKLLNKSLVEGIKLEDDVFDALIFHLCK 919
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKF 307
P++++ ++I G C GD K+ +Y+++ + NI V+N+L+N + +L
Sbjct: 659 PDVFLYNSLIS--GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+++ M G+ D Y IL+ C GN A ++ E + K V L F +
Sbjct: 717 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ---KSVGSLSAF--N 771
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ F A ++ +DM+ +TPN +T++ LI+A A ++E+A LF +M
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831
Query: 428 GCEPNS 433
PN+
Sbjct: 832 NIIPNT 837
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----------- 460
G + +A +F + G P CCN L++ ++A ++++ S
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245
Query: 461 --LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHYSSFDKRFSFK----- 512
+ K +G+ G +S ME + K ++ F+ + D+ K
Sbjct: 246 TNVIKAHCKVGDVIKGKM-VLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304
Query: 513 ----PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TY +L+ C K + M + GL+PN ++T LID GN+E
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL+I M G+ +VV Y I ++ + +A SLF EM I+P+ TY L+
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424
Query: 627 ARSRYGSLHEVQQCLA 642
+ + + + LA
Sbjct: 425 GYLKSHDMAKACELLA 440
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 117/217 (53%), Gaps = 10/217 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP L+ + + F K+ D+ A + YD + +PN+ + T+I+ G C G+
Sbjct: 657 VVPDV-FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++++ S+ ++ + Y++ L++ +L+ L ++ Q+ V ++++N L+
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLI 774
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G + A+E++ ++ ++ K L ++ TY+ ++ + A+ + A ++ DM +
Sbjct: 775 DSFCKHGKVIEARELFDDM--VDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ PNT+T++SL+ + G + + LF++M G
Sbjct: 831 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 195/447 (43%), Gaps = 59/447 (13%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N +R+ K + + Y + + P++Y +I GD +K + + ++ +
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N++ +N+ + + LEV K M + G+ D +Y +L+ C + A
Sbjct: 272 -CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + + + G L + FTY+ ++ F + AL++K++M++ G+ N +T+++
Sbjct: 331 KLIF---ESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I A AG + +AM LF EML AG EP++ N+L+ +++ +A L K
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
P+ TY++L+
Sbjct: 447 -----------------------------------------------LTPSPFTYSVLIS 459
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +D + ++++M G+ PN + LI A E A+++LKIM +G+ P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+ Y I R+K++++A L +M I+PN TY + S+ G E+Q
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG---EIQVAE 576
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
++DM +G N+ LI+ C+
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCD 603
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 176/397 (44%), Gaps = 27/397 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P+ + +ID D K+ + +++++ +T + + ++ L++ H DL+ EV
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + GV ++ Y L+KA +A E+ +K + A GVL D+F Y+ ++
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL---LKIMIANGVLP-DLFCYNCLII 529
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK + A + DM G+ PN T+ + IN + +G ++ A F++ML +G P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL++ + A F+ L K + Y +S K K+++
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHSLSK-NGKTKEAMG 647
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
F+ + P YN L+ C D + L +EM G++PN +
Sbjct: 648 VFLKFL----------KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI+ G V A ++ + E + PDVV Y+T I +S L +AF LF+EM
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL-------HEVQQ 639
I P+ Y L+ + G+L HE QQ
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 175/416 (42%), Gaps = 92/416 (22%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + D+ + + N + + + +N+ + +++ +K+M G++ + Y IL+
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K C GNTV A + K + KG++ D+ YS I+ + + A+ V L
Sbjct: 599 KGHCDVGNTVEALSTF---KCMLEKGLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P+ ++SLI+ G +E+A L++EML G PN N L+ + + +
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK 714
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A LF +E KD
Sbjct: 715 ARELF-----------------------DEIEEKD------------------------L 727
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL- 568
P TY+ ++ C +A L +EM + G+SP+ + ILID CG GN+E AL
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 569 ---------------------------------QILKIMREDGMSPDVVAYTTAIKVCVR 595
++ M + ++P++V YT I +
Sbjct: 788 LFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +++A LF +M+ I PN +TY +LL + ++ G+ ++ +++++DM G
Sbjct: 848 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM---ISLFKDMEARG 900
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 172/386 (44%), Gaps = 55/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLE-- 310
PN + I++ G+ + ++D+ S + N ++ L + H D+ T+E
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL--IKGHCDVGNTVEAL 611
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+K M + G++ D+ +Y+ ++ + G T A ++ +K L+ GV+ DVF Y+++
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKT-GVVP-DVFLYNSL 667
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A ++ ++ML G+ PN + +++LIN G V +A LF+E+ +
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRIS 480
P+ + ++ ++ AF+LF +SK G Y +GN ++
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEM-ISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 481 NMEHKDKQ-SITNTPNFVPNSHYSSF-----------------DKRFSFKPTTTTYNILM 522
++ H+ +Q S+ + F NS SF DK+ + P TY IL+
Sbjct: 787 SLFHEAQQKSVGSLSAF--NSLIDSFCKHGKVIEARELFDDMVDKKLT--PNIVTYTILI 842
Query: 523 KACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
D Y +M E M T + PN +++T L+ + GN + + K M
Sbjct: 843 -----DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897
Query: 576 EDGMSPDVVAY-TTAIKVCVRSKRLK 600
G++ D +AY A C K L+
Sbjct: 898 ARGIACDAIAYGVMASAYCKEGKSLE 923
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP L+ + + F K+ D+ A + YD + +PN+ + T+I+ G+C G+
Sbjct: 657 VVPDV-FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN--GLCKLGEVT 713
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+R +++++ +++ ++ ++++++ + +L +++ M G+ D Y IL+
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++ E + K V L F ++++ F A ++ +DM+
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQ---KSVGSLSAF--NSLIDSFCKHGKVIEARELFDDMVD 828
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+TPN +T++ LI+A A ++E+A LF +M PN+
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 870
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 26/271 (9%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + I+ G + +A +F + G P CCN L++ ++A ++++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 457 RS----------WTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHY 502
S +T + K +G+ G +S ME + K ++ F+
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM-VLSEMEKECKPNLFTYNAFIGGLCQT 289
Query: 503 SSFDKRFSFK---------PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISW 551
+ D+ K P TY +L+ C K + M + GL+PN ++
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LID GN+E AL+I M G+ +VV Y I ++ + +A SLF EM
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++P+ TY L+ + + + + LA
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K ++ A +D ++ P++ TIID G C G+ ++ ++
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID--GYCKSGNLTEAFKLF 754
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ S+ ++ + Y++ L++ +L+ L ++ Q+ V ++++N L+ + C
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKH 813
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + A+E++ ++ ++ K L ++ TY+ ++ + A+ + A ++ DM + + PN
Sbjct: 814 GKVIEARELFDDM--VDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+T++SL+ + G + + LF++M G
Sbjct: 870 TLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 204/476 (42%), Gaps = 60/476 (12%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+I + + F + A++ + KKH P + T++D G G ++ ++
Sbjct: 527 GEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ Q ++ ++SLM + +L ++ M + G +AD+++Y++++ C +
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646
Query: 338 GNTVLAQEIYGEVKHLEAKGVLK-------------------------------LDVFTY 366
+ A +++G +K + +L D F Y
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ +V + A K+ + M + + P+ T++SL++ +G +E+A ++F +M +
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYDGNTDRIS 480
G EP+ L+ + + A +FR+ + T +L D G R+
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL-IDSLGKEGRVE 825
Query: 481 NMEHKDKQSITN--TPNF-VPNSHYSSFDK---------------RFSFKPTTTTYNILM 522
+ + SI+ TPN V +S SF K R P TYN L+
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885
Query: 523 K--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + L+ EM VG P+ +++ ILID G G V+ A K M+E G+
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDV+ +T+ I+ + +L +A LF+ M+ P++VTY L+ R G +HE
Sbjct: 946 PDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 190/446 (42%), Gaps = 43/446 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + GK + A + K PN+ +I V G G ++ ++ D
Sbjct: 393 IAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHD 452
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ Q +++ +N+L++V + L + K M + G C ++ +
Sbjct: 453 LKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG------------GECIISRD 500
Query: 340 TVLAQE--IYGEVKHLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ E I G + +E + G L TY+T++ F A+K+ E M
Sbjct: 501 SNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+++L++ AG +++A+ L EM + GCEP+ + L+ + + Q + + L
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
F +++L + +D D D M+ + + + + +S
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
F+ + P T YNI++ +A L++ M+ + P+ +
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T L+D G SG +E A + M E+G PDVVAYT+ + V + +L A +F M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+ P++VTY +L+ + + G + E
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEE 826
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 198/456 (43%), Gaps = 38/456 (8%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + +R FG ++ AL ++ K +P+ + ++++ G Y + ++ L
Sbjct: 219 LLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL 278
Query: 283 ---RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R Q +F N + L E + M K G+ + ++ +L+ A +GN
Sbjct: 279 GQFRIQPDAQTFRIFVHSFNRSGR-LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGN 337
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + + +K+L +V TY+T+V A A + A +V +M +P+ I
Sbjct: 338 IDEACKFFNGMKNLRCSP----NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAI 393
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++LI+ AG + A LF+EM G PN + NI++ +A + A++LF
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 460 TLSKTQVALGEDYDGNT-----------DR----ISNMEHKDKQS-ITNTPNFVPNSHYS 503
K Q A+ + + NT D+ I M K + I+ N
Sbjct: 454 ---KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIE 510
Query: 504 SFDK-----RFSFKP-TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
D+ FK TYN LM A + + +A L+ M+ P +++T L+
Sbjct: 511 GADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLV 570
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G +G ++ A+ +L+ M + G P VV Y++ + + + +++ SLF+EM
Sbjct: 571 DGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCV 630
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ TY ++ + +V Q L V+ M + G
Sbjct: 631 ADVSTYSLVINCLCKS---DDVDQALDVFGRMKEEG 663
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 60/371 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + +++QN+ +++ + SL++ + L+ ++ M + G D+ +Y L+
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A I+ + AK DV TYS+++ + A E+ +S G T
Sbjct: 785 KGGKLSHALIIFRAM----AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCT 840
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +SSLI++ G+V++A+ LFEEM + C PN N LL +A + + A +L
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ + + P+ V
Sbjct: 901 L----------------------------EEMEKVGCVPDLV------------------ 914
Query: 516 TTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYNIL+ K D ++ M+ G+ P+ I++T LI++ G + A ++
Sbjct: 915 -TYNILIDGVGKMGMVD--EAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS-R 630
M E+G +P VV Y I + R+ ++ +A +F EMK P+ +T + R S R
Sbjct: 972 DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVR 1031
Query: 631 YGSLHEVQQCL 641
H +++ L
Sbjct: 1032 EQQFHALEEGL 1042
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 25/337 (7%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+ ++K A A+ +++ M G + +SL+ + V A+ +F
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M GC P++ N +L+ V+ + A +F + Q D T RI
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQP------DAQTFRI--F 293
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
H +S P P + P T+ +L+ A +A N M+
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMI----KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ SPN +++T L++ +G +E A ++ M+E+ SPD +AY T I ++
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
A LF+EMK + PNL TY ++ + G E Q ++ D+ + G +
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ---LFHDLKEQGAVPDVFTYN 466
Query: 661 ELIEEWCEG--------VIQDKNQNQGEVTLCRRTNS 689
LI+ +G +I++ + GE + R +N+
Sbjct: 467 TLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNA 503
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + GK+ + A ++ S +PN+ + ++ID G G ++ ++E+
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + NI +N+L++ A L ++ + M+K+G + D+ +YNIL+ G
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG---VGK 925
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ E K ++ KG++ DV T++++++ A ++ + M G P+ +
Sbjct: 926 MGMVDEAESYFKRMKEKGIVP-DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVV 984
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
T++ LI+ AG V +A +F EM GC P+ I+
Sbjct: 985 TYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + GK L AL + A K P++ ++ID G G ++ +E+
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
S+ T N+ V++SL++ + LE+++ MQ+ ++ +YN LL AG
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A+++ ++ +E G + D+ TY+ ++ A + M G+ P+ I
Sbjct: 894 LNVAEKL---LEEMEKVGCVP-DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI 949
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI + + +A LF+ M + G P+ N+L+ A + A +F
Sbjct: 950 TFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 196/434 (45%), Gaps = 47/434 (10%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+V+ Y I
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ + +A S F +M+ + PN+ Y L+ + G L+E Q ++ +M G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ---LFNEMVHKGM 569
Query: 653 KANDTYLKELIEEW 666
+ L++ +
Sbjct: 570 SLDKVVYTALLDGY 583
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 203/481 (42%), Gaps = 41/481 (8%)
Query: 217 VPRADILFCNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+P ++ N V +F K+ +L A + K+ P++ ++ID G CG+ +
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E++R ++ +N+L+N ++ + M++ GVMA++ +++ + A
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A +++ +++ +G + L+ FTY+ ++ A A+ + ++M+ G
Sbjct: 303 FCKEGLVREAMKLFAQMR---VRG-MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N +T++ L++ V +A + M +AG N L+ ++A
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--------PNFVPNSHYSSF 505
L ++ + Y + N+ D+ T PN++ + +
Sbjct: 419 GLLSEMKNKGLELDISL-YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI--IYTTMM 475
Query: 506 DKRF------------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
D F F+P TY L+ C +A+ N+MR +GL
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++T L+D +G + A+Q+ M GMS D V YT + ++ L AF+L
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+M +Q +L Y + S + +L+ + + V+ +M G + LI +
Sbjct: 596 KAKMIDSGLQLDLFCYTCFI---SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 666 W 666
+
Sbjct: 653 Y 653
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 171/421 (40%), Gaps = 59/421 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F FV F K+ + A++ + + + N + +ID G C G + +
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLID--GTCKAGRLDDAIVLL 351
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+++ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ +
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN
Sbjct: 412 KNSEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
I ++++++AC +G V +A+ + +++L +G +PN L+ +A D A
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI---- 523
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SH++ + P
Sbjct: 524 ------------------------------------------SHFNKM-RDLGLDPNVQA 540
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ C + +A L NEM G+S + + +T L+D GN+ A + M
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ D+ YT I + +A +F EM + I P+ Y L+ + G+L
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLE 660
Query: 636 E 636
E
Sbjct: 661 E 661
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+NI++ C + ++L + M+ +G P+ +++ LID G G ++ Q+
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ MR G DVV Y I + R++ A+ F MK + N+VT+ T + A +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQG 679
G V++ + ++ M G N+ LI+ C+ V+ D+ QG
Sbjct: 306 EGL---VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 106/288 (36%), Gaps = 58/288 (20%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T++ +I+ G + +A LF M + GC P+ N L+ + + D +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L +R K
Sbjct: 245 LVEEM-----------------------------------------------RRSGCKAD 257
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + R++ M+ G+ N ++++ +DA G V A+++
Sbjct: 258 VVTYNALINCFCK-FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLF 316
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
MR GM+ + YT I ++ RL A L +EM + N+VTY L+ +
Sbjct: 317 AQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKE 376
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
+ E + L + M KAG +AN+ LI G +KN +
Sbjct: 377 RKVAEAEDVLRM---MEKAGVRANELLYTTLI----HGHFMNKNSEKA 417
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN I T++D C G ++ A+ + + N+ + +L++ A + +
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------- 352
+ M+ LG+ ++ +Y L+ C G A +++ E+ H
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585
Query: 353 ---------LEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L+AK + L+LD+F Y+ + F + A +V +M+ G+ P+
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645
Query: 401 WSSLINACANAGLVEQAMHLFEEM 424
++ LI+ G +E+A+ L +EM
Sbjct: 646 YNCLISKYQKLGNLEEAISLQDEM 669
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
NHI + D G ++++ + E +P+V + I + L +A SLF
Sbjct: 161 NHILLRLARDRSG---------RLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLF 211
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
MK P++VT+ +L+ + G L EV+Q + ++M ++G KA+ LI +
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ---LVEEMRRSGCKADVVTYNALINCF 268
Query: 667 CE 668
C+
Sbjct: 269 CK 270
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 200/442 (45%), Gaps = 48/442 (10%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+V+ Y I
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ + +A S F +M+ + PN+ Y L+ + G L+E Q ++ +M G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ---LFNEMVHKGM 569
Query: 653 KANDTYLKELIEEWC-EGVIQD 673
+ L++ + +G + D
Sbjct: 570 SLDKVVYTALLDGYLKQGNLHD 591
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 203/481 (42%), Gaps = 41/481 (8%)
Query: 217 VPRADILFCNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+P ++ N V +F K+ +L A + K+ P++ ++ID G CG+ +
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E++R ++ +N+L+N ++ + M++ GVMA++ +++ + A
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A +++ +++ +G + L+ FTY+ ++ A A+ + ++M+ G
Sbjct: 303 FCKEGLVREAMKLFAQMR---VRG-MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N +T++ L++ V +A + M +AG N L+ ++A
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--------PNFVPNSHYSSF 505
L ++ + Y + N+ D+ T PN++ + +
Sbjct: 419 GLLSEMKNKGLELDISL-YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI--IYTTMM 475
Query: 506 DKRF------------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
D F F+P TY L+ C +A+ N+MR +GL
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++T L+D +G + A+Q+ M GMS D V YT + ++ L AF+L
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+M +Q +L Y + S + +L+ + + V+ +M G + LI +
Sbjct: 596 KAKMIDSGLQLDLFCYTCFI---SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 666 W 666
+
Sbjct: 653 Y 653
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 177/432 (40%), Gaps = 58/432 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K+ + A++ + + + N + +ID G + + ++
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ + N
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN I
Sbjct: 414 SEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++AC +G V +A+ + +++L +G +PN L+ +A D A
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI------ 523
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SH++ + P Y
Sbjct: 524 ----------------------------------------SHFNKM-RDLGLDPNVQAYT 542
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + +A L NEM G+S + + +T L+D GN+ A + M +
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ D+ YT I + +A +F EM + I P+ Y L+ S+Y L +
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI---SKYQKLGNL 659
Query: 638 QQCLAVYQDMWK 649
++ +++ +M +
Sbjct: 660 EEAISLQDEMER 671
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 106/288 (36%), Gaps = 58/288 (20%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T++ +I+ G + +A LF M + GC P+ N L+ + + D +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L +R K
Sbjct: 245 LVEEM-----------------------------------------------RRSGCKAD 257
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + R++ M+ G+ N ++++ +DA G V A+++
Sbjct: 258 VVTYNALINCFCK-FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLF 316
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
MR GM+ + YT I ++ RL A L +EM + N+VTY L+ +
Sbjct: 317 AQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKE 376
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
+ E + L + M KAG +AN+ LI G +KN +
Sbjct: 377 RKVAEAEDVLRM---MEKAGVRANELLYTTLI----HGHFMNKNSEKA 417
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
NHI + D G ++++ + E +P+V + I + L +A SLF
Sbjct: 161 NHILLRLARDRSG---------RLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLF 211
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
MK P++VT+ +L+ + G L EV+Q + ++M ++G KA+ LI +
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ---LVEEMRRSGCKADVVTYNALINCF 268
Query: 667 CE 668
C+
Sbjct: 269 CK 270
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 40/440 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I II + G G KS I+E++
Sbjct: 109 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEM 168
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG-N 339
+ V +++ + +L+N ++ +LE+ + M+K V + +YN ++ +C G N
Sbjct: 169 PTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLN 228
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ E++H +G+ + D+ TY+T++ A+ A V M G+ P+
Sbjct: 229 WEGLLSLFAEMRH---EGI-QPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDIT 284
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ +L+ +E+ L +EM +G P+ N+LL+A A +FR
Sbjct: 285 TYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQM 344
Query: 460 TLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++ T L Y G+ E + ++NT +P
Sbjct: 345 QEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNT------------------EP 386
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN+L++ Y V L ++M + PN ++ LI ACG G E A +IL
Sbjct: 387 DVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKIL 446
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+ P AYT I+ ++ ++A +F M +P + TY +L+ +R
Sbjct: 447 LHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFAR- 505
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G L++ + + MWK G
Sbjct: 506 GGLYKESEAI-----MWKMG 520
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 197/453 (43%), Gaps = 37/453 (8%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
VPR+ + + +G+ +L + KK +P++ T+I+ C G ++
Sbjct: 173 VPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGL 232
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
+++ ++R + + +I +N+L+N A+ L E V++ M + G++ D+ +Y L++
Sbjct: 233 LSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVET 292
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G +++ +K +E+ G L D+ +Y+ +++ +A + A+ V M A
Sbjct: 293 F---GKLNKLEKVSELLKEMESSGNLP-DISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T+S L+N G + LF EM + EP+ N+L++ E F
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVV 408
Query: 454 RLFRSWTLSKTQVALGEDYDG----------NTDRISNMEHKDKQSITNTPNFVPN---- 499
LF + +G Y+G + D + H D++ I +
Sbjct: 409 TLFHDMVEENVEPNMG-TYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEA 467
Query: 500 -SHYSSFDK---------RFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPN 547
+S+++ KPT TYN L M A Y +A+M +M G++ +
Sbjct: 468 YGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARD 527
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ +I+ G E A++ + + PD + + V + + ++ F
Sbjct: 528 RDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFR 587
Query: 608 EMKHYQIQPNLVTYITLLR--ARS-RYGSLHEV 637
E++ I P+++ Y ++ ARS R+ +EV
Sbjct: 588 EIRASGILPSVMCYCMMIAVYARSNRWDDAYEV 620
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP + + +G+ AL ++ + S P + ++I++ G Y +S
Sbjct: 454 IVPSTKA-YTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKES 512
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + V + FN ++ +F ++ Y ++K D ++ +L
Sbjct: 513 EAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSV 572
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E + E++ A G+L V Y ++ V+A + W A +V ++M++
Sbjct: 573 YCTAGLVDESEEQFREIR---ASGILP-SVMCYCMMIAVYARSNRWDDAYEVLDEMVTNK 628
Query: 394 VTPNTITWSSLINA----CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ ++ +N +VE ++F+++ GC + N LL+A Q
Sbjct: 629 VSNIHQVVGKMMKGDYDDYSNWQMVE---YVFDKLNSEGCGLGMRFYNTLLEALWWLGQK 685
Query: 450 DRAFRLF 456
+RA R+
Sbjct: 686 ERAARVL 692
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 102/235 (43%), Gaps = 9/235 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G + ++ I + + + + + ++ + L +
Sbjct: 421 PNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVM 480
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN L+ G L +E + + GV + D +++ +++
Sbjct: 481 FNTMNEMGSKPTVETYNSLINMFARGG---LYKESEAIMWKMGESGVAR-DRDSFNGVIE 536
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++ A+K ++ A P+ T+ ++++ AGLV+++ F E+ +G P
Sbjct: 537 GYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILP 596
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKT---QVALGEDYDGNTDRISNME 483
+ C +++ + ++D A+ + +K +G+ G+ D SN +
Sbjct: 597 SVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQ 651
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 90 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 149
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 150 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 209
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 210 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 265
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 266 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 322
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 323 --------------------------DEMRESNCP------------------LGTTTYN 338
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 339 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 398
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 399 GLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 458
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 459 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 504
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 26/366 (7%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + Q +G+ + L+ + A A+ ++ E G +K Y+
Sbjct: 107 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLE---FFLAGEIKPRTRAYN 163
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K + + A +V ++M GV P+ T+S L++A AG E A L +EM
Sbjct: 164 ALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 223
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +P+S + +L + ++ +AF + R S + DR H
Sbjct: 224 GVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR----------PDR-----HFYN 268
Query: 488 QSITNTPNFVPNSH-YSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
I + H +FD+ +P T+N L+ A C + R L +EMR
Sbjct: 269 VMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 328
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
++ I+I+ G EG +L M+E G+ P+++ YTT + V RS R K+A
Sbjct: 329 NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEA 388
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
E MK ++P+ Y L+ A ++ G L V + M G +A+ L L
Sbjct: 389 VDCIEAMKADGLKPSSTMYHALVNAYAQRGL---ADHALNVVKAMRADGLEASTVVLNSL 445
Query: 663 IEEWCE 668
I + E
Sbjct: 446 INAFGE 451
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 380
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L ++ LA VK + A G L+
Sbjct: 381 RSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 439
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 440 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 499
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 500 MITSGCAPDRKARAMLRSA 518
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 51/423 (12%)
Query: 267 GICGDYMKSRAI------YEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKL 318
G+ D +K+ + Y + NV ++Y + L+N + A + K + M++
Sbjct: 206 GLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEK 265
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +YN+++ C AG E + E+K L K L DVFTYS ++ F K
Sbjct: 266 GCSPSLVTYNVVIGGLCRAGEV---DEAF-ELKKLMDKKGLVADVFTYSILIDGFGKQKR 321
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + E+M S G+ P + +++LI+ G +A + EEML G + N N
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNA 381
Query: 439 LLQACVEACQFDRAFRLFRSWTL------SKTQVALGEDY--DGNTDRISNMEHKDKQSI 490
L++ + ++A L + ++T + E Y + NT R+ ++ + K+S
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS- 440
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLS 545
N VP T T +++ C D RV +M ++G+
Sbjct: 441 ----NLVP---------------TAYTCGMIINGLCRHGSIEDASRVFEIM---VSLGVK 478
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + +T LI G + A++ILK+M + G+ PDV+ Y + I +S+++++A
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
EM ++PN+ TY L+ + G E+Q +++M G ND LI+
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSG---EMQVADRYFKEMLGCGIAPNDVVCTALIDG 595
Query: 666 WCE 668
+C+
Sbjct: 596 YCK 598
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 44/428 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN+Y +I G C G+ + ++++ + N V +L++ + T
Sbjct: 549 PNVYTYGALIH--GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M V D+ +Y+ L+ G A E+ E LE KG++ DVFTY++I
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF--LE-KGLVP-DVFTYNSI 662
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M G++PN IT+++LIN AG +E+A LF+ + G
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGL 722
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDRISN 481
N+ ++ ++ +AFRLF TL + + G +GNT++ +
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS 782
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ S K F+ +T++ N LM C ++A L+ +M
Sbjct: 783 L------------------FLESVQKGFA---STSSLNALMDGFCKSGKVIEANQLLEDM 821
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ P+H+++TILID +G ++ A Q M++ + P+ + YT + + R
Sbjct: 822 VDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR 881
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ F+LF+EM I+P+ VT+ ++ A + G + + L + DM K G +
Sbjct: 882 SEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG---DHVKTLKLVDDMLKKGGNVSKNVC 938
Query: 660 KELIEEWC 667
LI+ C
Sbjct: 939 HVLIDPLC 946
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 190/449 (42%), Gaps = 70/449 (15%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
+DL+S + KK P Y C II+ G+C G + ++E + S V N
Sbjct: 431 KDLLSEM------KKSNLVPTAYTCGMIIN--GLCRHGSIEDASRVFEIMVSLGVKPNAV 482
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ +L+ + + +F + + K M K GV D+ YN ++ C + A++ E+
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+G LK +V+TY ++ + + Q+A + ++ML G+ PN + ++LI+
Sbjct: 543 IE---RG-LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +A +F ML P+ + + L+ + + A L + L K V
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF-LEKGLV---- 653
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
P TYN ++ C
Sbjct: 654 ------------------------------------------PDVFTYNSIISGFCKQGG 671
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KA L M G+SPN I++ LI+ +G +E A ++ + G++ + V Y T
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I +S L +AF LF+EM + P+ Y L+ + G+ ++ L+++ +
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN---TEKALSLFLESV 788
Query: 649 KAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ G+ A+ + L L++ +C+ G + + NQ
Sbjct: 789 QKGF-ASTSSLNALMDGFCKSGKVIEANQ 816
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/458 (18%), Positives = 174/458 (37%), Gaps = 110/458 (24%)
Query: 253 SPNMYICRTIIDVCGICGDY-----------MKSRAIYEDLRS----------------- 284
+PN +C +ID G C + M R+++ D+R+
Sbjct: 583 APNDVVCTALID--GYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 285 ---------QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + +++ +NS+++ + ++++ M + G+ ++ +YN L+
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG A+E++ + KG L + TY+TI+ + + A ++ ++M G
Sbjct: 701 LCKAGEIERARELFDGIP---GKG-LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-----VEACQ 448
V P++ +S+LI+ C G E+A+ LF E +Q G S ++ C +EA Q
Sbjct: 757 VPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQ 816
Query: 449 F--DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--KDKQSITNTPNFVP------ 498
D + + ++ T + DY T + E D Q PN +
Sbjct: 817 LLEDMVDKHVKPDHVTYTILI---DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLS 873
Query: 499 --------NSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL------------- 535
+ ++ FD+ + +P T+++++ A + VK L
Sbjct: 874 GYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNV 933
Query: 536 ------------------------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ ++ GL+ + + + L+ +G ++GA ++L
Sbjct: 934 SKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVL 993
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
K M PD I V S + A ++M
Sbjct: 994 KSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031
>gi|298707694|emb|CBJ26011.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1173
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 161/384 (41%), Gaps = 78/384 (20%)
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I ++N+ + + L V++ MQ GV D SY ++ AC G A +
Sbjct: 165 RIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALALL 224
Query: 348 GEVKHL------------------------EAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
E+K + G D+ Y+ ++K A K WQ A+
Sbjct: 225 AEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAI 284
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQA 442
++ +DM +AGV PN + ++ ++ACA G V +A L +EM + G P + N ++
Sbjct: 285 RLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYGVAPEVRSYNSVISG 344
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
A ++ A L + ME D +PN
Sbjct: 345 HERAGEWREALALAK-----------------------RMEQAD--------GVLPN--- 370
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
T+N ++ AC T +AL + +R GL P+ IS+ I AC
Sbjct: 371 ------------VVTFNSVIGACKTAGRPEEALAVLGMLRRKGLQPDVISFNSAIGACAS 418
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM---KHYQIQPN 617
G E ALQ+L++M +G++PD++ Y A+ CV+ + + A SLF+E+ ++P+
Sbjct: 419 GGKWEVALQLLELMPSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPD 478
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
L TY TL+ S G L + L
Sbjct: 479 LYTYNTLMTVFSDAGMLPRALELL 502
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 200/462 (43%), Gaps = 79/462 (17%)
Query: 217 VPRADILFCNFVRE---FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
P D+L V + +GK+ A+R D +PN+ + T + C CG
Sbjct: 259 APAPDLLLYAVVMKACAWGKR--WQQAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVS 316
Query: 274 KSRAIYEDLRSQ-NVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKL-GVMADMASYNI 329
++ + ++++ + V + +NS+++ + A + + L + K M++ GV+ ++ ++N
Sbjct: 317 RATQLLQEMQEKYGVAPEVRSYNSVISGHERAGEWREALALAKRMEQADGVLPNVVTFNS 376
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ AC AG A + G ++ KG L+ DV ++++ + A W++AL++ E M
Sbjct: 377 VIGACKTAGRPEEALAVLGMLRR---KG-LQPDVISFNSAIGACASGGKWEVALQLLELM 432
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE---PNSQCCNILLQACVEA 446
S GVTP+ +T++ ++AC G E AM LF+E++ +G E P+ N L+ +A
Sbjct: 433 PSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPDLYTYNTLMTVFSDA 492
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
RA L E K K+
Sbjct: 493 GMLPRALELLE-------------------------EAKAKR------------------ 509
Query: 507 KRFSFKPTTTTYNILMKAC----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+P TY+ L++AC + L+++M G+ PN+ ++ + + G S
Sbjct: 510 ----LRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSA 565
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM----KHYQIQPNL 618
L +L+ M G PD + Y +KV R ++A LFEEM + + P +
Sbjct: 566 RPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAI 625
Query: 619 V--TYITLLRARSRYGSLHEVQQCLAVYQDMW--KAGYKAND 656
TY +RA R G E L D W K Y A++
Sbjct: 626 AEETYCCGIRALERLGKWSEAVALL----DQWRQKGSYDADN 663
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 171/463 (36%), Gaps = 87/463 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I C G ++ A+ LR + + ++ FNS + A K+ L++
Sbjct: 369 PNVVTFNSVIGACKTAGRPEEALAVLGMLRRKGLQPDVISFNSAIGACASGGKWEVALQL 428
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ M GV D+ +YNI L AC G +A ++ E+
Sbjct: 429 LELMPSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPDLYTYNTLMTV 488
Query: 351 --------KHLE----AKGV-LKLDVFTYSTIVKVFADAKWWQ--MALKVKEDMLSAGVT 395
+ LE AK L+ DV TYST+++ + Q +ALK+ DM + GV
Sbjct: 489 FSDAGMLPRALELLEEAKAKRLRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEAEGVR 548
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC----------------CNIL 439
PN T+ + + + + + L M G P++ C ++L
Sbjct: 549 PNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLL 608
Query: 440 LQACVEA---------------CQFDRAFRLFRSWTLSKT---QVALGEDYDGNTDRISN 481
+ VE C RA W+ + Q YD + DR+ +
Sbjct: 609 FEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYD 668
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
++ + ++ + K T+ I+ A A+M M +
Sbjct: 669 QWYRALRLLST----------GGLPEETDVK--TSRAAIVSAARGGLVEDALAIMRSMES 716
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G + + I+A +G E L++ M G+ PDV+ Y A + C R
Sbjct: 717 RGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAG 776
Query: 602 AFSLFEEMKHYQIQPNLVTYIT---LLRARSRYGSLHEVQQCL 641
A S E + P T+ T L R RY L ++++ +
Sbjct: 777 AISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELM 819
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN ++A C + ++ EM++ G+ P+ S+ ++ AC G + AL +
Sbjct: 164 PRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALAL 223
Query: 571 LKIMR---------------------------EDGM-SPDVVAYTTAIKVCVRSKRLKQA 602
L M+ EDG +PD++ Y +K C KR +QA
Sbjct: 224 LAEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQA 283
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L ++M + PN+V T L A ++ G + Q L Q+
Sbjct: 284 IRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQE 327
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F EM G +P+ ++ AC + + +KT +AL
Sbjct: 185 ALSVFREMQSDGVDPDRDSYFFVMSACSKRGE-------------AKTALAL-------- 223
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSF----DKRFSFKPTTTTYNILMKACC--TDYY 530
++ M+ + +Q + D+ + P Y ++MKAC +
Sbjct: 224 --LAEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQ 281
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVVAYTTA 589
+ L+++M G++PN + + AC G V A Q+L+ M+E G++P+V +Y +
Sbjct: 282 QAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYGVAPEVRSYNSV 341
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
I R+ ++A +L + M+ + PN+VT+ +++ A G E L + +
Sbjct: 342 ISGHERAGEWREALALAKRMEQADGVLPNVVTFNSVIGACKTAGRPEEALAVLGMLR 398
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 183/403 (45%), Gaps = 35/403 (8%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+++ E++ S + NIY + + V A + + K M+ G D+ +Y +L+ A
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDA 308
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG A E++ ++K K D TY T++ F+D + +M + G
Sbjct: 309 LCTAGKLDDAMELFVKMKASSHKP----DRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ IT++ L+NA AG +++A HL + M + G PN N L+ + + D A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 454 RLFRSW-TLSKTQVA----LGEDYDGNTDRISN-MEHKDKQSITN-TPNFVP-NSHYSSF 505
LF + TL A L D+ G + R +E +K I PN V N+ S
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + K + N +++ GL+P+ +++ +++ +G V+
Sbjct: 485 AEMGRLR------------------EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++L M E+ PD++ + I ++ R+ +A+ +F +K ++ P +VTY TL+
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G +VQ+ + ++ M G N +++ C+
Sbjct: 587 AGLGKEG---QVQRAMELFASMTGNGCPPNTITFNTILDCLCK 626
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 163/358 (45%), Gaps = 31/358 (8%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++K C ++AQ ++ ++ + GV K + +Y+ +++ F +MA + +M
Sbjct: 760 IIKVLCKHKQALVAQSVF--IRFTKELGV-KPTLESYNFLIEGFLGVHNDEMAWNLFTEM 816
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+AG P+ T++ L++A +G + + L+E+M+ + C+PN+ NI++ V++
Sbjct: 817 KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSL 876
Query: 450 DRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSIT---NTPNFVPNSH 501
D+A LF S S T G DG + R+ + ++ + N + N
Sbjct: 877 DKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNIL 936
Query: 502 YSSFDK---------------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+ F K R +P +Y L+ C AL +++ GL
Sbjct: 937 INGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ I++ ++ID G S +E AL + M+ G++PD+ Y + I + ++QA
Sbjct: 997 YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGK 1056
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L+EE++ ++PN+ TY L+R S G+ AVY+ M G N +L
Sbjct: 1057 LYEELQFIGLEPNVFTYNALIRGYSMSGN---SDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 52/351 (14%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ T + M++ G + SYN L+ +G A E+Y + + +G LK +
Sbjct: 175 LRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMY---RRMVLEG-LKPSLK 230
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+S ++ + + + E+M S G+ PN T++ I AG +++A + + M
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM 290
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
GC P+ +L+ A A + D A LF S + DR++ +
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK----------PDRVTYITM 340
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
DK S C D RVK +EM G
Sbjct: 341 LDKFSD-----------------------------------CGDLGRVKEFWSEMEADGY 365
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ I++TIL++A +GN++ A +L +MR+ G+ P++ Y T I +R RL A
Sbjct: 366 APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALD 425
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
LF M+ + P TYI + YG + L ++ M G N
Sbjct: 426 LFNNMETLGVVPTAYTYILFI---DFYGKSGRSDKALETFEKMKIRGIAPN 473
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP+ T++ LM A D VK+L+ EM ++GL PN ++TI I G +G ++ A
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I+K M +DG PDVV YT I + +L A LF +MK +P+ VTYIT+L
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK 343
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S G L V++ + +M GY + L+ C+
Sbjct: 344 FSDCGDLGRVKE---FWSEMEADGYAPDVITFTILVNALCK 381
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 166/415 (40%), Gaps = 43/415 (10%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+ + K P+ T++D CGD + + + ++ + ++ F
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+N A ++ + M+K GV+ ++ +YN L+ A +++ ++E
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF---NNME 431
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
GV+ +TY + + + AL+ E M G+ PN + ++ + + A G +
Sbjct: 432 TLGVVP-TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRL 490
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+A +F + G P+S N++++ +A Q D A L
Sbjct: 491 REAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL------------------- 531
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMK 523
+S+M + N + N+ Y + K PT TYN L+
Sbjct: 532 ----LSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIA 587
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ R L M G PN I++ ++D + V+ AL++L M P
Sbjct: 588 GLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMP 647
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DV+ + T I V KR+ A LF +MK + P+ VT TLL + G + +
Sbjct: 648 DVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMED 701
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 181/449 (40%), Gaps = 33/449 (7%)
Query: 216 IVPRAD--ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+VP A ILF +F +GK AL ++ K +PN+ C + G
Sbjct: 435 VVPTAYTYILFIDF---YGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLR 491
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I+ L+S + + +N +M A + +E+ +M + D+ N L+
Sbjct: 492 EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AG A +++ +K ++ L V TY+T++ Q A+++ M
Sbjct: 552 NTLYKAGRVDEAWKMFCRLKDMK----LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PNTIT++++++ V+ A+ + +M C P+ N ++ V +
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667
Query: 452 AFRLFRSW--TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF L+ V L G + N +D I +FV + D+RF
Sbjct: 668 AIWLFHQMKKMLTPDCVTLCTLLPG---VVKNGLMEDAFKIAE--DFV-HRLGVYVDRRF 721
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG---LSPNHISWTILIDACGGSGNVEG 566
+ LM T K ++ R V + I+ C +
Sbjct: 722 --------WEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
++ +E G+ P + +Y I+ + + A++LF EMK+ P++ TY LL
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A + G ++E+ +Y+ M + K N
Sbjct: 834 AHGKSGKINEL---FELYEQMICSSCKPN 859
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN I +I+ G GD + +++ + + + ++ + SL+ A + L
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ +++ G+ D +YN+++ + A +Y E ++++G+ D+FTY++++
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE---MQSRGI-NPDLFTYNSLIL 1043
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + A K+ E++ G+ PN T+++LI + +G + A +++ M+ GC P
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSP 1103
Query: 432 NS 433
N+
Sbjct: 1104 NT 1105
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 120/309 (38%), Gaps = 54/309 (17%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
V +L ++K D+ TY I K +F Q + M AG N +++ LI+
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGK-MREAGFHLNAYSYNGLIHLL 204
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+GL +A+ ++ M+ G +P+ + T S VA
Sbjct: 205 LQSGLCREALEMYRRMVLEGLKPSLK-------------------------TFSALMVAT 239
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+ D T + S +E + KP TY I ++
Sbjct: 240 GKRRDTETVK-SLLEEMES---------------------LGLKPNIYTYTICIRVLGRA 277
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A +M M G P+ +++T+LIDA +G ++ A+++ M+ PD V Y
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + L + + EM+ P+++T+ L+ A + G++ E L V
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDV--- 394
Query: 647 MWKAGYKAN 655
M K G N
Sbjct: 395 MRKQGVLPN 403
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK D+ +A + + P++ +++ G + +E L+
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ L+ +N +++ +H ++ L +Y MQ G+ D+ +YN L+ +AG A
Sbjct: 996 LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++Y E++ + L+ +VFTY+ +++ ++ + A V + M+ G +PNT T++ L
Sbjct: 1056 KLYEELQFIG----LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Query: 405 IN 406
N
Sbjct: 1112 PN 1113
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 26/373 (6%)
Query: 290 NIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ FN+L+N + + T VY M G + D+ +++ L+ C G A E+
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V ++AKG K ++ TY+ ++ F + A + +ML+ G + NT+ +++LI+
Sbjct: 405 ---VNDMDAKGC-KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G + +A+ +F EM GC+P+ N L+ + + A L+R L +
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL---EG 517
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP-TTTTYNILMKAC 525
+ NT + + + Q N D F P TYN L+KA
Sbjct: 518 VIANSVTFNTLIHAFLRRGEIQEALKLVN----------DMLFRGCPLDEITYNGLIKAL 567
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C K L EM GL+P+ I+ ILI+ +G V AL+ ++ M G SPD+
Sbjct: 568 CKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDI 627
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y + I + R+++A +LFE+++ IQP+ +TY TL+ R G+ + C +
Sbjct: 628 VTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA--CFLL 685
Query: 644 YQDMWKAGYKAND 656
Y+ + + G+ ND
Sbjct: 686 YRGV-ENGFVPND 697
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 159/376 (42%), Gaps = 40/376 (10%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN++L + +A ++ + + +KGV D +T+ ++K A +
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYD---MLSKGVSPND-YTFGLVMKALCMVNEVDNACLL 232
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G PN++ + +LI+A + V++A+ L EEM GC P+ N ++
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYG--- 289
Query: 446 ACQFDRAFR--------LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-- 495
C+ +R + + +T + T RI E + S PN
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRID--EAQALLSKVPGPNVV 347
Query: 496 --------FVPNSHYSS-----FDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNE 538
FV N + +DK + + P T++ L+ C + L+N+
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN ++TILID G +E A IL+ M G S + V Y I + +
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A +F EM +P++ T+ +L+ R + E++ LA+Y+DM G AN
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR---VDEMEDALALYRDMVLEGVIANSVT 524
Query: 659 LKELIEEWC-EGVIQD 673
LI + G IQ+
Sbjct: 525 FNTLIHAFLRRGEIQE 540
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 24/349 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F V KK SAL + PN+ +ID G C G ++ I +
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILID--GFCKKGQLEEAGLILRE 442
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ +LN +N+L++ K L+++ M G D+ ++N L+ C
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +Y + + +GV+ V T++T++ F Q ALK+ DML G + I
Sbjct: 503 MEDALALY---RDMVLEGVIANSV-TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEI 558
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI A G VE+ + LFEEM++ G P+ CNIL+ A + A R
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDM 618
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D I+ + + + I N +P + TYN
Sbjct: 619 ----IHRGFSPDIVTYNSLINGLCKRGR--IQEALNLFEKLQAE------GIQPDSITYN 666
Query: 520 ILMKACCTDYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSGNVEG 566
L+ C + A R V G PN ++W IL+ G N EG
Sbjct: 667 TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEG 715
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 200/477 (41%), Gaps = 66/477 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K + +A +D +K+ + N I II C C + ++ A+
Sbjct: 381 VTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 439
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 440 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG 499
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 500 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 555
Query: 399 I-----------------------------------TWSSLINACANAGLVEQAMHLFEE 423
I T+ +IN A +G + +++ +F+
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC P N L+ VE Q ++A + TL+ +S E
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAG---------------VSANE 660
Query: 484 H---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
H K Q + + Y + + + TY L+KACC AL E
Sbjct: 661 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKE 720
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + N + ILID G+V A +++ M+++G+ PD+ YT+ I C ++
Sbjct: 721 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 780
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 781 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAVGLKPD 834
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 187/453 (41%), Gaps = 63/453 (13%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
++ G GD ++R +E +R++ +T ++ SL++ A D++ L + M++ G
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375
Query: 320 VMADMASYNILLKACCLAGNT---------------VLAQEIYGE--------------- 349
+ + +Y++++ AGN L IYG+
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 435
Query: 350 --VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V+ +E +G+ + Y T++ + + L V + + G TP +T+ LIN
Sbjct: 436 ALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINL 494
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQ 465
G + +A+ + M + G + N + ++++ V+ + AF +F K
Sbjct: 495 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 554
Query: 466 VALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSSFDKRFSFK--- 512
V L + + NM+ K+ Q + + P F+P N S D R S +
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFD 614
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
PT T+N L+ KA +++EM G+S N ++T ++ G
Sbjct: 615 MMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM I N Y
Sbjct: 675 DTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 734
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ +R G + E + Q M K G K +
Sbjct: 735 ILIDGWARRGDVWEAADLI---QQMKKEGVKPD 764
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 148/372 (39%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II+ GD +S +++
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 675
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L++D+FTY ++K + Q AL V ++M + + N+
Sbjct: 676 TGKAFEYF---TRLQNEG-LEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 731
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 732 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 784
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 785 ----------------TQTIEEME------------------------ALGVKPNIKTYT 804
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ VGL P+ + L+ + ++ G + I
Sbjct: 805 TLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 864
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 865 KEMVEAGLIVDM 876
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 105/277 (37%), Gaps = 23/277 (8%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++ G + +A FE M G P S+ L+ A + A
Sbjct: 308 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSC 367
Query: 456 FRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R +++L Y G + N E D H+ KR
Sbjct: 368 VRKMKEEGIEMSL-VTYSVIVGGFSKAGNAEAAD--------------HWFDEAKRIHKT 412
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ Y ++ A C + R +AL+ EM G+ + ++D + + L +
Sbjct: 413 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIV 472
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
K ++E G +P VV Y I + + ++ +A + MK ++ NL TY ++
Sbjct: 473 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING--- 529
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ L + AV++DM K G K + +I +C
Sbjct: 530 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFC 566
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 214/480 (44%), Gaps = 53/480 (11%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I + G+ + ++ + + N+
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + E+ ++M G+ ++ SYN+++ C G +EI +
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM---KEISFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G++P+ IT++SLI++ A
Sbjct: 300 EMNKRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +A ++M G PN + L+ + + A+R+ + S + V
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ +T P+ V S S F + +
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLT--PDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L +EM VGL P+ ++T LI+A G++
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY--- 621
+ A+Q+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 622 ------------ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++L++ G + E Q V++ M + +K + T +I C G
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQ---VFESMLEKNHKPDGTAYNVMIHGHCRG 653
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 130/587 (22%), Positives = 240/587 (40%), Gaps = 93/587 (15%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKK 138
+ ++++ + S+ N+S FA + EM+ S + ++ G +D + +
Sbjct: 172 YNAVLDATIRSKRNIS-FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDR 230
Query: 139 LNELGVAPL-----ELFDG--------SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ + G P L DG GF+LL++ + L+ + V + + E R
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
+ +E V +NK +L ++ + ++ + K+ + AL +
Sbjct: 291 M------KEISFVLTEMNKRGYSLD----------EVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
+H SP++ ++I G+ ++ + +R + + N + +L++ +
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ V K M G + +YN L+ C+AG V A + ++K KG L DV
Sbjct: 395 YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE---KG-LTPDV 450
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+YST++ F + AL+VK M++ G+ P+TIT+SSLI ++A LF+E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML+ G P+ L+ A C+E L ++ L V G D T + +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEG-------DLQKAIQLHNEMVEKGVLPDVVTYSVL-I 562
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYRVKAL 535
+KQ+ T KR K P+ TY+ L++ C ++
Sbjct: 563 NGLNKQARTREA------------KRLLLKLFYEESVPSDVTYHTLIENCSNIEFK---- 606
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
S LI G + A Q+ + M E PD AY I R
Sbjct: 607 --------------SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+++A+SL++EM + VT I L++ + G ++E+ +A
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 185/421 (43%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ AI +++ S + N ++ L++ ++ HD +++ M K G+ D A Y
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ FA A + AL + +
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQ----KERMQPSNRAFRPIIEGFAVAGDMKRALNILD 573
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + +M AG PN I+++
Sbjct: 574 LMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANG 633
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ G
Sbjct: 634 DIGKAFEYF-------TKIKEG-------------------------------------- 648
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM T ++ N + ILID G+V
Sbjct: 649 --GLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVW 706
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PNL TY TL+
Sbjct: 707 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLI 766
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ ++ SL + + L +++M AG K ++ L+ + + + G +++C
Sbjct: 767 KGWAK-ASLPD--RALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSIC 823
Query: 685 R 685
R
Sbjct: 824 R 824
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+R + +K P+ R II+ + GD ++ I + +R
Sbjct: 520 LIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSG 579
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + + ++ + V M G+ + +Y I+++ G+ A
Sbjct: 580 CAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAF 639
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA------------ 392
E + ++K +G LKLDV+ Y T+++ + Q AL V +M +
Sbjct: 640 EYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNIL 695
Query: 393 -----------------------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
GV PN T++S INAC AG +++A + EEM G
Sbjct: 696 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGL 755
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ +A DRA + F L+
Sbjct: 756 KPNLKTYTTLIKGWAKASLPDRALKSFEEMKLA 788
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ +Q +
Sbjct: 626 MRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKI 685
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +V+N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ AQ+
Sbjct: 686 ARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQK 745
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + K LK TY+T++K +A A ALK E+M AG+ P+ + L+
Sbjct: 746 VIEEMADVGLKPNLK----TYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLV 801
Query: 406 NA 407
+
Sbjct: 802 TS 803
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 23/283 (8%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M + G+ PN ++SL++A A A + + EEM G E +I++ +
Sbjct: 293 ENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKI 352
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS--ITNTPNFVPNSHYSS 504
A LF+ + + LG D N SN+ H QS + V
Sbjct: 353 NDAQSADNLFK-----EAKAKLG---DLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 404
Query: 505 FDKRF-SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D ++ Y I+ K C + R+K +P+ IS+ LI+
Sbjct: 405 IDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECC-------FTPSIISYGCLINLYIKI 457
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V A+ I K M G+ + Y+ I + AFS+FEEM +QP+ Y
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L+ A + G++ + + + + M K + ++ + +IE
Sbjct: 518 NLLIEAFCKMGNM---DRAIRILEKMQKERMQPSNRAFRPIIE 557
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ G L
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 386 QSGNMDRAEE 395
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 193/444 (43%), Gaps = 59/444 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + ++++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I+ ++ ++A F M P++ T+ +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 646 DMWKAGYKANDTYLKELIEEWCEG 669
D +G N IE + +G
Sbjct: 520 D---SGIPRNRDTFNAQIEAYKQG 540
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 52/463 (11%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + +I +N+L++ A L E V++ M G++ D+ +Y+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV-- 289
Query: 334 CCLAGNTVLAQEIYGEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
E +G+++ LE A G D+ +Y+ +++ +A + + A+
Sbjct: 290 -----------ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +AG TPN T+S L+N +G + LF EM + +P++ NIL++
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNS 500
E F LF + + E Y+G H+D + I + VP+S
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDM-ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 501 H-YSSFDKRF-------------------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
Y+ + F P+ T++ L+ + +A+++
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G+ N ++ I+A G E A++ M + PD + V ++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + FEEMK I P+++ Y +L + +V + L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 55/304 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N + P+ TYN ++ AC D+ + L
Sbjct: 202 MKNEK---------------------------ISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG N
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAGCTPN 351
Query: 656 -DTY 658
+TY
Sbjct: 352 ANTY 355
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 213/480 (44%), Gaps = 53/480 (11%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I G+ + +++ + ++ N+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + ++ ++M G+ ++ SYN+++ C G +E+ +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G+TP+ IT++SLI++ A
Sbjct: 300 EMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +AM ++M G PN + L+ + + A+R+ R S + V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ + +P+ V S S F + +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L EM VGL P+ ++T LI+A G++
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY--- 621
E ALQ+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 622 ------------ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++L++ G + E Q V++ M +K + T +I C
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQ---VFESMLGKNHKPDGTAYNIMIHGHCRA 653
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)
Query: 316 QKLGVMADMASYNILLKACCLAG-NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
Q G M + SYN +L A + N A+ ++ E+ LE++ + +VFTY+ +++ F
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LESQ--VSPNVFTYNILIRGFC 216
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A +AL + + M + G PN +T+++LI+ ++ L M G EPN
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 435 CCNILLQA-CVEACQFDRAFRLF----RSWTLSK-TQVALGEDY--DGNTDRISNMEHKD 486
N+++ C E + +F L R ++L + T L + Y +GN + M H +
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM-HAE 335
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
R P+ TY L+ + C + R +++MR GL
Sbjct: 336 ML-------------------RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++T L+D G + A ++L+ M ++G SP VV Y I + +++ A +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ E+MK + P++V+Y T+L R ++V + L V ++M + G K + LI+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRS---YDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 665 EWCE 668
+CE
Sbjct: 494 GFCE 497
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 36/330 (10%)
Query: 350 VKHL-EAKGVLKLDVFTYSTIVKVFADAKW-WQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ HL +A G + V +Y+ ++ +K A V ++ML + V+PN T++ LI
Sbjct: 156 IVHLAQAHGFMP-GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG ++ A+ LF++M GC PN N L+ + + D F+L RS L +
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 468 L--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
L G +G +S FV + ++R + TYN
Sbjct: 275 LISYNVVINGLCREGRMKEVS---------------FV----LTEMNRR-GYSLDEVTYN 314
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+K C + +++ + EM GL+P+ I++T LI + +GN+ A++ L MR
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ YTT + + + +A+ + EM P++VTY L+ G +
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM--- 431
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ +AV +DM + G + ++ +C
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 200/495 (40%), Gaps = 64/495 (12%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNF-----------VREFGKKRDLVSALRAYDAS 247
Q+ N N+ IR C D+ F V + D LR D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 248 KKHLSS-------PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
K L S PN+ +I+ G+C G + + ++ + +L+ +N+L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVIN--GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ F L ++ M + G+ + +Y L+ + C AGN A E +++ +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR---VR 374
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+T+V F+ + A +V +M G +P+ +T+++LIN G +E
Sbjct: 375 GLCP-NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + E+M + G P+ + +L + D A R+ R + + D +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGIKPDTITYS 489
Query: 477 DRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRV 532
I + + K++ + R P TY L+ A C D +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEML----------RVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ-ILKIMREDGMSPDVVAYT---- 587
L NEM G+ P+ +++++LI+ A + +LK+ E+ + DV +T
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 588 ----------TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ IK + +A +FE M +P+ Y ++ R G ++
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG---DI 656
Query: 638 QQCLAVYQDMWKAGY 652
++ +Y++M K+G+
Sbjct: 657 RKAYTLYKEMVKSGF 671
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 21/355 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + + K ++ A+ D + PN T++D G ++ + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ + ++ +N+L +N H + +E V ++M++ G+ D+ SY+ +L C +
Sbjct: 406 MNDNGFSPSVVTYNAL--INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ A + E + KG+ K D TYS++++ F + + + A + E+ML G+ P+
Sbjct: 464 YDVDEALRVKRE---MVEKGI-KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LINA G +E+A+ L EM++ G P+ ++L+ + + A RL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SF 511
++ V Y + SN+E K S+ F + D+ F +
Sbjct: 580 KLFYEES-VPSDVTYHTLIENCSNIEFKSVVSLIK--GFCMKGMMTEADQVFESMLGKNH 636
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T YNI++ C D + L EM G + ++ L+ A G V
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 213/503 (42%), Gaps = 86/503 (17%)
Query: 129 IDCVVGVLKKLNELGVAPLELFDGSG---FKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+D +V K E+ +A LE FD +G F+L C +L S E +G++E +
Sbjct: 162 VDMLVWAYVKNGEMDLA-LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV---- 216
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
KE+ ++ VN ++ I C V + F K D+V ++A+
Sbjct: 217 --YKEMIRR----RIGVNVVTFDVVINGLCKVGK-----------FQKAGDVVEDMKAWG 259
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
S P++ TIID G K+ A+ +++ ++ + N FN L++ D
Sbjct: 260 FS------PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 306 KFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
T +V++ MQ+ G+ ++ +YN L+ C G E G + G LK +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL---DEALGLQDKMSGMG-LKPNV 369
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ ++ F K + A ++ +D+ G+ PN IT+++LI+A AG ++ A L
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML G PN N L+ V C+ K L ++ +GN
Sbjct: 430 MLDTGVCPNVSTYNCLI---VGFCREGNV----------KEARKLAKEMEGN-------- 468
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K TYNIL+ A C KA L++EM
Sbjct: 469 --------------------------GLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
VGL+P+H+++ LID GN AL + +M + G ++V Y IK +L++
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 562
Query: 602 AFSLFEEMKHYQIQPNLVTYITL 624
A L EM + PN TY L
Sbjct: 563 ANRLLNEMLEKGLIPNRTTYDIL 585
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 159/404 (39%), Gaps = 92/404 (22%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M + + ++ ++++++ C G A ++ V+ ++A G V TY+TI+
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV---VEDMKAWG-FSPSVITYNTII 271
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A + ++M++ + PN IT++ LI+ V A +FEEM + G +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ + D A L D++S M
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGL--------------------QDKMSGM-------- 363
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
KP TYN L+ C + +++++ GL+PN
Sbjct: 364 -------------------GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 549 ISWTILIDACGGSG-----------------------------------NVEGALQILKI 573
I++ LIDA G +G NV+ A ++ K
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G+ D+V Y + + ++A L +EM + P+ +TY L+ R G+
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L V M K G +AN LI+ +C +G +++ N+
Sbjct: 525 ---STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR 565
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 70/343 (20%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V ++M+ + N +T+ +IN G ++A + E+M G P+ N ++
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG-- 273
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ +A ++F++ L K VA
Sbjct: 274 ----YCKAGKMFKADALLKEMVA------------------------------------- 292
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KR P T+NIL+ C D K + EM+ GL PN +++ LI+ +G
Sbjct: 293 --KRIH--PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ AL + M G+ P+VV Y I + K LK+A + +++ + PN++T+
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
TL+ A YG + + M G N + LI +C EG +++ + E+
Sbjct: 409 TLIDA---YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465
Query: 682 -----------------TLCRRTNSQRPQSLLLEKVAVHLQKS 707
LC++ +++ LL E V L S
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPS 508
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F KK+ L A D K +PN+ T+ID G G + + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 287 VTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +N L+ ++K ++ K M+ G+ AD+ +YNIL+ A C G T A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ E+ + L TY+ ++ + AL V+ M G N +T++ L
Sbjct: 495 RLLDEMFEVG----LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL 550
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
I N G +E+A L EML+ G PN +IL +E
Sbjct: 551 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 591
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V+++ EM + N +++ ++I+ G + A +++ M+ G SP V+ Y T I
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ +A +L +EM +I PN +T+ L+ R ++ ++ V+++M + G
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKK---VFEEMQRQG 329
Query: 652 YKANDTYLKELIEEWC 667
+ N LI C
Sbjct: 330 LQPNVVTYNSLINGLC 345
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 195/448 (43%), Gaps = 53/448 (11%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D+ A+ + + SP +I G G ++ AI+E+L
Sbjct: 258 LLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEEL 317
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + +N+L+ V LK + M++ G D +Y++L+ A AG
Sbjct: 318 KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRW 377
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA GV + + + +S I+ + D WQ + +V +M ++GV+P+
Sbjct: 378 ESARIV---LKEMEASGV-RPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHF 433
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ A+ F+ M G +P++ N L+ ++ ++A LF +
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA-- 491
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY-- 518
M+ T T N + N SF ++ ++ T
Sbjct: 492 ---------------------MQESGCSPCTTTYNIMIN----SFGEQERWEDVKTLLGK 526
Query: 519 --------NILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGN 563
N++ D Y + M++VGL P+ + LI+A G
Sbjct: 527 MQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGL 586
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E A+ ++MR DG+ P V+ + I +R +AFS+ + MK ++P++VTY T
Sbjct: 587 SEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTT 646
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++A R + + + AVY++M +G
Sbjct: 647 LMKALIR---VEKFDKVPAVYEEMTLSG 671
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 214/497 (43%), Gaps = 59/497 (11%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ TL +N+L+ A DL+ L + M++ G +D +Y+ +
Sbjct: 166 RSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFI 225
Query: 331 LKACCLA--GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ ++ + Q+IY E++ ++LD + I+ FA + A+
Sbjct: 226 IQSLTRTNKSDSSMLQKIYAEIE----SDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAM 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ G++P T T ++I A NAG E+A +FEE+ + G P ++ N LL+ V+
Sbjct: 282 VQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 449 FDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNME--HKDKQSITNTPN-FVPNS 500
A + ++ + +L D N R + K+ ++ PN +V +
Sbjct: 342 LKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSR 401
Query: 501 HYSSFDKRFSFK---------------PTTTTYNILM----KACCTDYYRVKALMNEMRT 541
+S+ R ++ P YN+++ K C D+ A + MR
Sbjct: 402 ILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH--ALATFDRMRM 459
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++W LID SG+ A ++ + M+E G SP Y I +R +
Sbjct: 460 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 519
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
+L +M+ + N+VTY TL+ + G + +CL V M G K + T
Sbjct: 520 VKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEV---MKSVGLKPSSTMYNA 576
Query: 662 LIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTK 721
LI + + + ++ N V R + +P L+L N I+ G +
Sbjct: 577 LINAYAQRGLSEQAINAFRVM---RADGLKPSVLVL-------------NSLINAFGEDR 620
Query: 722 VEARIIVLAVLRMMKEN 738
+A +VL+ MKEN
Sbjct: 621 RDAE--AFSVLQYMKEN 635
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTL 309
SP+ + +ID G C + A ++ +R + V + +N+L++ + H K
Sbjct: 428 SPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNK-AE 486
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----EAKGVLKLDVFT 365
E+++ MQ+ G +YNI++ N+ QE + +VK L +++G+L +V T
Sbjct: 487 ELFEAMQESGCSPCTTTYNIMI-------NSFGEQERWEDVKTLLGKMQSQGLLA-NVVT 538
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T+V ++ + ++ A++ E M S G+ P++ +++LINA A GL EQA++ F M
Sbjct: 539 YTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G +P+ N L+ A GED +
Sbjct: 599 ADGLKPSVLVLNSLIN-------------------------AFGED------------RR 621
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D ++ + + K KP TY LMKA + +V A+ EM G
Sbjct: 622 DAEAFS----------VLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671
Query: 544 LSPNHISWTILIDA 557
+P+ + +L A
Sbjct: 672 CTPDRKARAMLRSA 685
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 157/677 (23%), Positives = 282/677 (41%), Gaps = 78/677 (11%)
Query: 4 VFGSSSSSSSAIVATQTRLYN-HRNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLST 62
VF S +S +QT L + HR + + HP L P ++S L + +LL
Sbjct: 105 VFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLLF 164
Query: 63 VRRDLSSRNDYYA-DMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIV 121
+ D SS++ + L K GR + +++ + + S ++ E+V SG
Sbjct: 165 NQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSG-- 222
Query: 122 KSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL----------KN-------EC-Q 163
+S +G VVG++ KL E GV P GFKL KN C
Sbjct: 223 RSFPDGE---VVGLVAKLGERGVFP------DGFKLTQLVGKLCGDQKNGVAWEVLHCVM 273
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL 223
RL + + L+ L R +K ++E ++ +P V +
Sbjct: 274 RLGGAVDAASCNALLTWLGRGR-DIKRMNELLAEMEKRKIRPSV--------------VT 318
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSS------PNMYICRTIIDVCGIC--GDYMKS 275
F V K R + AL+ +D + S P++ + T+ID G+C G
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLID--GLCKVGKEEDG 376
Query: 276 RAIYEDLRSQNVTL-NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ E+++ N+ N +N L++ A + E+++ M + GV ++ + N L+
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A E + E+K KG LK + TY+ ++ F A++ E+MLS+
Sbjct: 437 GLCKHGRVHRAVEFFNEMK---GKG-LKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +P+ + + SLI+ AG + A + ++ AG + C N+L+ + + +R
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ L + + D IS + T +F S + +
Sbjct: 553 YELLTEME----ETGVKPDTITYNTLIS--------YLGKTGDFATASKVMEKMIKEGLR 600
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P+ TY ++ A C+ + + EM T + PN + + ILIDA + +V+ A+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+++ M+ + P+ Y +K K L +AF L + M +P+ +T L S
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLS 720
Query: 630 RYGSLHEVQQCLAVYQD 646
G + +++ + YQD
Sbjct: 721 AVGEIEKLKHFVEGYQD 737
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 165/390 (42%), Gaps = 42/390 (10%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG---- 357
D+K E+ M+K + + ++ IL+ C A A +++ L KG
Sbjct: 294 GRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF---DRLRGKGGSNW 350
Query: 358 -VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT-PNTITWSSLINACANAGLVE 415
++ DV ++T++ + L + E+M + PNT+T++ LI+ AG +
Sbjct: 351 VGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFD 410
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKTQVALG 469
+A LF +M + G +PN N L+ + + RA F + T AL
Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALI 470
Query: 470 EDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYS------------------SFDKRFS 510
+ G + M+ ++ S +P+ V +YS S K
Sbjct: 471 SAFCGVNNINRAMQCFEEMLSSGCSPDAV--VYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F + YN+L+ C RV L+ EM G+ P+ I++ LI G +G+ A
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRA 627
++++ M ++G+ P VV Y I K + + +F EM ++ PN V Y L+ A
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R ++V + +++ +DM + N T
Sbjct: 649 LCRN---NDVDRAISLMEDMKVKRVRPNTT 675
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 129/334 (38%), Gaps = 48/334 (14%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G + E+ G V L +GV D F + +V + +A +V ++ G
Sbjct: 221 SGRSFPDGEVVGLVAKLGERGVFP-DGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV 279
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + ++L+ +++ L EM + P+ IL+ +A + D A ++F
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
D+ N+V +P
Sbjct: 340 -----------------------------DRLRGKGGSNWV------------GVEPDVV 358
Query: 517 TYNILMKACCTDYYRVK--ALMNEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKI 573
+N L+ C +L+ EM+ ++ PN +++ LID +GN + A ++ +
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E+G+ P+V+ T + + R+ +A F EMK ++ N TY L+ A +
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ QC +++M +G + LI C
Sbjct: 479 INRAMQC---FEEMLSSGCSPDAVVYYSLISGLC 509
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS------P 581
D R+ L+ EM + P+ +++ IL++ + ++ ALQ+ +R G S P
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQQC 640
DVV + T I + + + SL EEMK I +PN VTY L+ + G+ +
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHE- 414
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE 668
+++ M + G + N L L++ C+
Sbjct: 415 --LFRQMNEEGVQPNVITLNTLVDGLCK 440
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 169/416 (40%), Gaps = 82/416 (19%)
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHD 304
+K+ PN++ +I C G++ S E +R + N +++++++ +
Sbjct: 136 TKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACERSDQ 195
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----------- 353
+ +++ + M++ G++ +YN ++ AC +G LA + E+ +
Sbjct: 196 WQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFAS 255
Query: 354 ---------EAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ VL++ D + Y+T + W ++ ++M S G
Sbjct: 256 AMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNG 315
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V + +T S I+ACA+ G QA L E+ML G PN L+ Q +RA
Sbjct: 316 VAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAI 375
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++ + + +PN
Sbjct: 376 KIL--------------------------------DLMRSKGVMPN-------------- 389
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY++ + AC ++ R AL+ EM G+SPN IS+ I ACG +G + AL ++
Sbjct: 390 -VRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLM 448
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M G+ VV Y TA+ C R+ K A L M+ QI+PN + Y +++A
Sbjct: 449 DEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKA 504
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 166/374 (44%), Gaps = 24/374 (6%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLA 343
V N+ +N+++ NA K +++ M K G+ ++ +Y L+ AC GN
Sbjct: 105 VEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNW--- 161
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ ++ + G L + YST++ + WQ A+K+ M G+ P T+T+++
Sbjct: 162 EDSVNYLEQMRQSG-LAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNT 220
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I+AC +G A+ L +EM GC P + AC A Q+ R+ +
Sbjct: 221 VISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDE 280
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V D T I K + Y T ++ +
Sbjct: 281 VWV----DKYAYTTAIHAAGQLGK--------WARCVRYLDEMDSNGVAKDVVTVSVAIS 328
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
AC + + + L+ +M GL+PN I++T L+ G E A++IL +MR G+ P
Sbjct: 329 ACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMP 388
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+V Y+ AI C +K ++A +L +EM+ + PN ++Y T +RA G L E L
Sbjct: 389 NVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEA---L 445
Query: 642 AVYQDMWKAGYKAN 655
+ +M G KA+
Sbjct: 446 DLMDEMESRGVKAS 459
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 162/387 (41%), Gaps = 31/387 (8%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T+I CG G + + ++ +++ F S M A L + MQ+
Sbjct: 220 TVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQED 279
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
V D +Y + A G E +++ GV K DV T S + AD
Sbjct: 280 EVWVDKYAYTTAIHAAGQLGKWARCVRYLDE---MDSNGVAK-DVVTVSVAISACADKGQ 335
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W A K+ EDML G+TPN IT++SL+ G E+A+ + + M G PN + ++
Sbjct: 336 WAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSV 395
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ AC +A ++ RA L + + + V+ E R D ++ + +
Sbjct: 396 AIAACADAKEWRRALALLKE--MEREGVSPNEISYNTAIRACG----DAGQLSEALDLM- 448
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ R K + TY + AC D+ L+ MR + PN I + +I
Sbjct: 449 ----DEMESR-GVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIK 503
Query: 557 ACGGSGN----------VEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
AC +G +E A+Q+ K+ S + +YT + R R ++A L
Sbjct: 504 ACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIML 563
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
F+EM+ +I P + Y +++RA R G
Sbjct: 564 FQEMEDRKIMPTVQCYTSVVRACERSG 590
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 165/413 (39%), Gaps = 66/413 (15%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + F + + + R LR D ++ + Y T I G G + +
Sbjct: 247 PPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVR 306
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACC 335
+++ S V ++ + ++ A ++ ++ ++M G+ ++ +Y L+
Sbjct: 307 YLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLR 366
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +I + + +KGV+ +V TYS + ADAK W+ AL + ++M GV+
Sbjct: 367 RGGQHERAIKI---LDLMRSKGVMP-NVRTYSVAIAACADAKEWRRALALLKEMEREGVS 422
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++++ I AC +AG + +A+ L +EM G + + + AC A + A L
Sbjct: 423 PNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALEL 482
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ +R +P
Sbjct: 483 LAAM-----------------------------------------------RREQIEPNE 495
Query: 516 TTYNILMKACCTDYYRVKALM------------NEMRT-VGLSPNHISWTILIDACGGSG 562
Y ++KACC KAL+ N+++ S S+T L+DA
Sbjct: 496 IVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTREL 555
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ A+ + + M + + P V YT+ ++ C RS + A L ++M+ +++
Sbjct: 556 RWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQYDVALRLLDDMRKKRMR 608
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ P+VV+Y I C +K+ K+A +F EM K I+PN+ TY L+ A ++ G+ +
Sbjct: 104 AVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWED 163
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCR--RTNSQRPQS 694
L + M ++G N +I CE +Q Q V L R R + P +
Sbjct: 164 SVNYL---EQMRQSGLAPNAVIYSTVISA-CE----RSDQWQKAVKLLRTMRRDGILPVT 215
Query: 695 LLLEKVAVHLQKSAAENLAIDL 716
+ V KS +LA+ L
Sbjct: 216 VTYNTVISACGKSGQWSLAVSL 237
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 226/519 (43%), Gaps = 61/519 (11%)
Query: 184 FRLPVKE----LDEEFRIVQLCVNKPDVN-LAIRYACIVPRADILFCNFVREFGKKRDLV 238
+RLP + L + + C N+ + LA+ + + ++F VR + + +
Sbjct: 104 YRLPSPKPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPN 163
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + K+ PN+ C ++ + + +Y ++ N+ ++Y FN ++
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223
Query: 299 NV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
NV LK E +M+ LGV ++ +YN ++ CL G A+ I+ +K K
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD---K 280
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+ D +TY++ + + A + ML G+ PN +T+++LI+ N G +++
Sbjct: 281 G-LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +EM+ G + N+ + A LF + G+
Sbjct: 340 AYAYRDEMISKGIMASLVTYNLFIHA------------LFMEGRM------------GDA 375
Query: 477 DR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKA 524
D I M K T N + N + D + +F +PT TY L+
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R+K AL ++++ GL P+ I + LID +GN++ A Q+LK M + P
Sbjct: 436 -LGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D + Y T ++ R ++++A L +EMK I+P+ ++Y TL+ S+ G +++
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG---DMKDAF 551
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
V +M G+ LI+ C KNQ +GE
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLC------KNQ-EGE 583
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 192/424 (45%), Gaps = 39/424 (9%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y M ++ + + + ++NI++ C G A+E G H+E GV K +V TY+TI+
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIG---HMETLGV-KPNVVTYNTII 258
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+Q A + + M G+ P+ T++S I+ G +E+A L +ML+ G
Sbjct: 259 HGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV 318
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ N L+ D+A+ +R +SK +A Y+ + ME + +
Sbjct: 319 PNAVTYNALIDGYCNKGDLDKAYA-YRDEMISKGIMASLVTYNLFIHALF-MEGR----M 372
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNH 548
+ N + + P T+NIL+ C C D R L++EM G+ P
Sbjct: 373 GDADNMIKEM------REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T LI G ++ A + ++++G+ PD++ + I + + +AF L +E
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M + ++ P+ +TY TL++ R G + E +Q L +M + G K + LI + +
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLL---DEMKRRGIKPDHISYNTLISGYSK 543
Query: 669 -GVIQDKNQNQGEVT-----------------LCRRTNSQRPQSLLLEKVAVHLQKSAAE 710
G ++D + + E+ LC+ + + LL E V+ + +
Sbjct: 544 RGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDST 603
Query: 711 NLAI 714
L+I
Sbjct: 604 YLSI 607
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMAS 326
CGD ++ + +++ + + + + SL+ V + +K ++ +Q+ G++ D+
Sbjct: 404 CGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N L+ C GN A ++ E+ +++ VL D TY+T+++ + + A ++
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMK---VLP-DEITYNTLMQGYCREGKVEEARQLL 519
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++M G+ P+ I++++LI+ + G ++ A + +EM+ G +P N L+Q +
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN 579
Query: 447 CQFDRAFRLFR 457
+ + A L +
Sbjct: 580 QEGEHAEELLK 590
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 85/193 (44%), Gaps = 45/193 (23%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTL 309
P + ++I V G ++ A++ ++ + + +I VFN+L ++ H ++
Sbjct: 424 PTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL--IDGHCANGNIDRAF 481
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ K M + V+ D +YN L++ C G A+++ E+K +G+ K D +Y+T+
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKR---RGI-KPDHISYNTL 537
Query: 370 VKVFADAKWWQMALKVKEDML-----------------------------------SAGV 394
+ ++ + A +V+++M+ S G+
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597
Query: 395 TPNTITWSSLINA 407
TP+ T+ S+I A
Sbjct: 598 TPDDSTYLSIIEA 610
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 193/465 (41%), Gaps = 89/465 (19%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
R A + PR I+ EFGK ++ ++ Y S +Y+C + D+ G+
Sbjct: 83 RMARMNPRPSIV------EFGKFLGSIAKMKQY--------STVVYLCNQM-DLFGV--- 124
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ +Y +LNI + N L +N D F + V+ M KLG+ D+ ++ L+
Sbjct: 125 ---THTVY--------SLNILI-NCLCRLNHVD--FAVSVWGKMFKLGIQPDVITFTTLI 170
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G +A E+Y E+ + + DV +Y+T++ ++ MA+ V + M
Sbjct: 171 NGVCNEGKIKVAVELYNEM----VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ 226
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN +T++++I++ LV AM EM+ G P++ N ++ Q +
Sbjct: 227 NGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNE 286
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A RLF+ ME
Sbjct: 287 ATRLFKR-----------------------MEQN------------------------GC 299
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYNI++ + D A ++EM G+ P+ +++T ++ G + A++
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G PDVVAY T I + + + A EM I PN VTY T+L
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC 419
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
G L E Q ++++M N L++ C EG++ +
Sbjct: 420 NLGQLDEATQ---LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 18/326 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ ++K M++ G D+ +YN ++ + C A E E + +G+ + TYST
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE---MVDRGIPP-NAVTYST 413
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ F + A ++ ++M+ V PNT+T+S L++ G+V +A +FE M + G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EPN N L+ C+ + A ++F + K Y+ + N DK
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFE-IMVGKGCAPDLHSYNILINGYCNSRRMDKA 532
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
T V K+ + P T TYN +MK C + L +M + G+ P
Sbjct: 533 KALLTQMSV---------KKLT--PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++++IL++ G+++ AL++ K M+E + PD++ YT I+ +L+ A LF
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
++ IQP TY +++ + G
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEG 667
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 45/254 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN ++D G+C + M S A ++E + + V NIY +N+LMN K
Sbjct: 441 PNTLTFSILVD--GLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498
Query: 310 EVYKNMQKLGVMADMASYNIL-----------------------------------LKAC 334
+V++ M G D+ SYNIL +K
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + AQE++ K + + G+L + TYS ++ ALK+ + M +
Sbjct: 559 CYVGRLLDAQELF---KKMCSSGMLP-TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ I ++ LI G +E A LF ++ G +P + N++++ ++ D A+
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674
Query: 455 LFRSWTLSKTQVAL 468
LFR W + K V +
Sbjct: 675 LFRKWKMMKHNVII 688
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 194/438 (44%), Gaps = 59/438 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I++ G K+ AI +++ S + N ++ L++ ++ HD
Sbjct: 449 TPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFR 508
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G+ D A YN+L++A C GN A I +++ K ++ + I+
Sbjct: 509 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ----KERMQPSNRAFRPII 564
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ FA A + AL + + M +G P +T+++LI+ VE+A+ + +M AG
Sbjct: 565 EGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGIT 624
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I+++ +AF F T++ G
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYF-------TKIKEG--------------------- 656
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K Y L++ACC AL EM + ++ N
Sbjct: 657 -------------------GLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ ILID G+V A ++K M+EDG+ P++ YT+ I C ++ +++A ++ +E
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDE 757
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WC 667
M ++PNL TY TL++ +R SL + + L +++M AG K ++ L+
Sbjct: 758 MSDVGLKPNLKTYTTLIKGWAR-ASLPD--RALKCFEEMKLAGLKPDEAAYHCLVTSLLS 814
Query: 668 EGVIQDKNQNQGEVTLCR 685
+ + + G +++CR
Sbjct: 815 RATVMEGSTYTGILSVCR 832
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+R + +K P+ R II+ + GD ++ I + +R
Sbjct: 528 LIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSG 587
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + + ++ + V M G+ + +Y I+++ G+ A
Sbjct: 588 CAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAF 647
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K +G LKLDV+ Y T+++ + Q AL V +M S + NT ++ L
Sbjct: 648 EYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNIL 703
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 704 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 751
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ SQ +
Sbjct: 634 MRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKI 693
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +V+N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ AQ
Sbjct: 694 ARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQT 753
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + K LK TY+T++K +A A ALK E+M AG+ P+ + L+
Sbjct: 754 VIDEMSDVGLKPNLK----TYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLV 809
Query: 406 NA 407
+
Sbjct: 810 TS 811
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 33/288 (11%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M + G+ PN ++SL++A A A + A+ EEM G E +IL+ +
Sbjct: 301 ENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKI 360
Query: 447 CQFDRAFRLFRSWTLS--------KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
A LF+ + + + GN DR + H+ ++ + P
Sbjct: 361 NDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAP---- 416
Query: 499 NSHYSSFDKRFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
D ++ Y I+ K C + R+K +P+ IS+ LI+
Sbjct: 417 ------ID---AYHSMMHGYTIIQDEKKCLIVFERLKECC-------FTPSIISYGCLIN 460
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G V A+ I K M G+ + Y+ I + AF +FEEM +QP
Sbjct: 461 LYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQP 520
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ Y L+ A + G++ + + + + M K + ++ + +IE
Sbjct: 521 DRAIYNLLIEAFCKMGNM---DRAIRILEKMQKERMQPSNRAFRPIIE 565
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 394 QSGNMDRAEE 403
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 45/413 (10%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + G+ K ++E L+ ++ + L+N+ A K + LEV K M
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMM 507
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ +V K LK DV Y+ I++ F
Sbjct: 508 ESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV----VKDGLKPDVVLYNNIIRAFCG 563
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG +++A+ +F+ M ++GC P
Sbjct: 564 MGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHT 623
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE Q ++A + L+ +S EH T
Sbjct: 624 FNALILGLVEKRQMEKAIEILDEMALAG---------------VSPNEH--------TYT 660
Query: 496 FVPNSHYSSFDKRFSFKPTTT-----------TYNILMKACCTDYYRVKAL--MNEMRTV 542
+ + + + D +F+ T TY L+KACC AL EM
Sbjct: 661 TIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQ 720
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ N + ILID G+V A +++ M++ G+ PD+ YT+ I C ++ + +A
Sbjct: 721 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRA 780
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ EEM+ ++PN+ TY TL+ +R SL E + L +Q+M AG K +
Sbjct: 781 SKMMEEMETSGVKPNVKTYTTLIHGWAR-ASLPE--KALRCFQEMKLAGLKPD 830
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 187/448 (41%), Gaps = 69/448 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R++ + +V+ SL++ A D++ L + M++ GV + +Y
Sbjct: 320 GDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTY 379
Query: 328 NILLKACCLAGNTVLAQE---------------IYGE-----------------VKHLEA 355
+I++ GN A IYG V+ +E
Sbjct: 380 SIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEG 439
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V E + G P+ +++ LIN A G +
Sbjct: 440 EGIDAPIDI--YHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKI 497
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ ++ + AF +F K V L +
Sbjct: 498 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNI 557
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH-----------YSSFD--KRF 509
G DR + M+ + + + T F+P H FD +R
Sbjct: 558 IRAFCGMGTMDRAICMVKEMQKERHRPTSRT--FMPIIHGFARAGEMKRALDVFDMMRRS 615
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA+ ++EM G+SPN ++T ++ G+ A
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKA 675
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +R++G+ DV Y +K C +S R++ A ++ +EM I N Y L+
Sbjct: 676 FEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDG 735
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+R G + E + Q M + G K +
Sbjct: 736 WARRGDVWEAADLM---QQMKQGGVKPD 760
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SPN + TI+ GD K+ + LR + + L++Y
Sbjct: 633 EKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVY 692
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ ++
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 752
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G +K D+ TY++ + A A K+ E+M ++GV PN T+++LI+ A
Sbjct: 753 K----QGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWAR 808
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ F+EM AG +P+ + L+ A + A+
Sbjct: 809 ASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 135 VLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRL 186
V ++L E G AP + L+ G E ++++S ++ + +L L
Sbjct: 468 VFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFL 527
Query: 187 PVKELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRADILFCNFVREFGKKR----- 235
+K+ F I + V KPDV N IR C + D C V+E K+R
Sbjct: 528 KLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAIC-MVKEMQKERHRPTS 586
Query: 236 --------------DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
++ AL +D ++ P ++ +I G+ +AI
Sbjct: 587 RTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALI--LGLVEKRQMEKAIEIL 644
Query: 280 EDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ V+ N + + ++M+ A D E + ++ G+ D+ +Y LLKACC +
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKS 704
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTP 396
G Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P
Sbjct: 705 GRM---QSALAVTKEMSAQNIPR-NTFVYNILIDGWARRGDVWEAA-DLMQQMKQGGVKP 759
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ T++S INAC AG + +A + EEM +G +PN + L+ A ++A R F
Sbjct: 760 DIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCF 819
Query: 457 RSWTLS 462
+ L+
Sbjct: 820 QEMKLA 825
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 21/276 (7%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + +++ A G + +A FE M G EP S L+ A + A
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363
Query: 456 FRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R +++L Y G +I N + D+ + R S
Sbjct: 364 ARKMKEEGVEMSL-VTYSIIVGGFAKIGNADAADRW-------------FKEAKDRHSHM 409
Query: 513 PTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
N++ C T + + +AL+ EM G+ + ++D GN E L +
Sbjct: 410 NAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVF 469
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++E G +P VV+Y I + + ++ +A + + M+ I+ N+ TY L+ +
Sbjct: 470 ERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLING---F 526
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L + A+++D+ K G K + +I +C
Sbjct: 527 LKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFC 562
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 163/359 (45%), Gaps = 36/359 (10%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV+ +Y +++ C AG A E+ E+ GV VF Y+ I+ A
Sbjct: 49 GVVYGETTYKLVVDGLCGAGMANQALELVRELS-----GVYTPTVFIYNGIITGLCRASR 103
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A KV E M+ + PN T++ L+N + + A +F+EM + GC+PN
Sbjct: 104 VMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGT 163
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH-----KDKQSI 490
L+Q A + D A R+ RS L T V G + S ++ ++ + +
Sbjct: 164 LIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 491 TNTPNFVPNSH-------YSSFDKRFSF----------KPTTTTYNILMKACCTDYY--R 531
PN V S+ + D+ F Y + A C Y R
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDR 282
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + E+R G+ P+ +++++LI+ +G + +L++L+ MR +G+ PDVV Y+T I
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V + ++ + AF L E M+ PN+VTY +++ + G + EV + VY+ M K+
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR---VYEMMLKS 398
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 265 VCGICGDYMKSRAIYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---G 319
V G+CG M ++A+ E +R S T ++++N ++ + ++ YK ++K+
Sbjct: 61 VDGLCGAGMANQAL-ELVRELSGVYTPTVFIYNGIITGLCRASR-VMDAYKVLEKMVEES 118
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ ++ +Y ILL C + T LA+E++ E+K + K + TY T+++ + A
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMK----RNGCKPNPITYGTLIQHLSRAGEI 174
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL+V + S + + IT ++++ A ++ A+ EEM Q G PN + L
Sbjct: 175 DEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITN----- 492
+ + + DR R F K Y G D + + D+ +S+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 493 -TPNFVPNS-------HYSSFD---------KRFSFKPTTTTYNILMKACCT-----DYY 530
P+ V S FD +R KP TY+ L+ C D +
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ M G PN +++ ++D SG ++ ++ ++M + SPDVV Y+ +
Sbjct: 355 R---LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIM 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ L A LFE +K + P+ Y ++ + R G L E
Sbjct: 412 NGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEE 457
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 193/453 (42%), Gaps = 55/453 (12%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P ++I II G+C M + + E + +++ N++ + L+N ++ K
Sbjct: 85 TPTVFIYNGII--TGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLA 142
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV++ M++ G + +Y L++ AG A + E + LE L DV T +T
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE----LPTDVITCTT 198
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE----- 423
IV A ALK E+M GV PN +T+S+L++ G +++ + FEE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 424 --MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALG 469
L+A P L A +A DRA + ++++ A
Sbjct: 259 GGSLEAAAYPG------YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF---------KPTTTTY 518
+D + + + +M + T + + N F F P TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 519 NILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
N +M C + +RV +M + R SP+ ++++I+++ +G ++ A+++ ++
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRC---SPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT-LLRARSRYG 632
++ PD AY+ I R+ +L++A ++ M+ N+ + L+ A
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAK 489
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
++ + V ++ K+ DT L +++E+
Sbjct: 490 RTDSARRIVEVARERGHRVTKSGDTDLAKIVED 522
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSP-NMYICRTIIDVCGICGDYMKSRAI-- 278
I + ++ + ++ ALR ++ L P ++ C TI+ G+C A+
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVM-IEQRSLELPTDVITCTTIVG--GLCKASRLDDALKF 215
Query: 279 YEDLRSQNVTLNIYVFNSLMN-VNAH-DLKFTLEVYKNMQ-KLGVMADMASYNILLKACC 335
E++R V N +++L++ H +L + ++ + + G + A+Y L A C
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A++ V+ L GV+ DV TYS ++ FA A + +L++ EDM GV
Sbjct: 276 KAGYLDRARK---SVEELRQSGVVP-DVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+S+LIN + A L E M AG PN N ++ ++ + D R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391
Query: 456 F 456
+
Sbjct: 392 Y 392
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASK-KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
++ + N V F + +L +R ++ K + S +D G ++R
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+LR V ++ ++ L+N A +F +LE+ ++M++ GV D+ +Y+ L+ C
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
Q+ + ++ +EA G +V TY++++ + +V E ML + +P+
Sbjct: 348 RKF---QDAFRLLELMEAAGSPP-NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+S ++N + AG+++ A+ LFE + + P++ ++++ + A + + A ++
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463
Query: 458 SWTLS 462
++
Sbjct: 464 GMEVT 468
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 181/419 (43%), Gaps = 59/419 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + + ++ A R DA + P+ Y ++I G+C G ++ +++
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI--SGMCKEGRLEEASGLFDK 268
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N +N+L++ N DL+ M K G+M +++YN+L+ A + G
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +
Sbjct: 329 MGEADDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D++S+ P T+N
Sbjct: 445 --------------------------DRKSV---------------------PPDEVTFN 457
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + L++EM+ G+ P+HIS+ LI G G+++ A + M
Sbjct: 458 TLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P ++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 518 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 57/372 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK E M+ LG ++ SYN ++ GN A+ I + + KG+ + D +
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI---LDAMRVKGI-EPDSY 244
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +++ + A + + M+ G+ PN +T+++LI+ N G +E+A +EM
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ G P+ N+L+ A LF + + D I M
Sbjct: 305 VKKGIMPSVSTYNLLVHA------------LFMEGRMGEAD-----------DMIKEMRK 341
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
K P TYNIL+ C + R L NEM +
Sbjct: 342 K------------------------GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK 377
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P H+++T LI ++ A + + + + G+SPDV+ + I + +++A
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F L +EM + P+ VT+ TL++ R R G + E + L +M G K + L
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL---DEMKXRGIKPDHISYNTL 494
Query: 663 IEEWC-EGVIQD 673
I + G I+D
Sbjct: 495 ISGYGRRGDIKD 506
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 255 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG---YCNKGDLERAFSYRDEMVKKGIMP 311
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 312 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 360
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A RA+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ ++ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 421 FNAM--IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A V+++MLS G P +T+++LI
Sbjct: 479 MK---XRGI-KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLC 534
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 535 KNQEGDLAEELLKEMVNKGISPD 557
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T I K ++W + + +S +TP I+ + L N C+ LV +H
Sbjct: 70 TZEVISKSVLSSQWHFI------EQVSPNLTPALIS-NVLYNLCSKPQLVSDFIH----H 118
Query: 425 LQAGC-EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--TQVALGEDYDGNTDRISN 481
L C + S C ++L A + + + A +L + ++ T L ++ + DR+S
Sbjct: 119 LHPHCLDTKSYCLAVVLLARLPSPKL--ALQLLKQVMETRIATNRELFDELTLSRDRLSV 176
Query: 482 --------MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
+E K K++ + F + FKP +YN ++ + +
Sbjct: 177 KSSIVFDLLEGKLKKA----------REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 226
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ +++ MR G+ P+ ++ LI G +E A + M E G+ P+ V Y T I
Sbjct: 227 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 286
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++AFS +EM I P++ TY L+ A G + E + ++M K G
Sbjct: 287 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI---KEMRKKG 343
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 182/416 (43%), Gaps = 51/416 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ +ID G C G + +++ + +++ + + N+ +++L+N + KF
Sbjct: 282 PDLFTYNCMID--GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +YN ++ C A+ ++ ++ A DVFT++T+
Sbjct: 340 ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF----YVMATKGCSPDVFTFNTL 395
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK ++ +M G+ +T T+++LI+ G + A+ L ++M+ +G
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ CN LL + + A +F++ SK + ++G
Sbjct: 456 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNG--------------- 500
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ PN
Sbjct: 501 ---------------------VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +I+ ++ A Q+ M SPDVV + T + ++ R+ LF
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM I + +TYITL+ + G+ + L ++Q+M +G + ++ ++
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGN---INGALDIFQEMISSGVYPDTITIRSML 652
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 197/477 (41%), Gaps = 87/477 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + PN TI+D G+C GD + + +
Sbjct: 179 VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD--GMCKIGDTVSALNLL 236
Query: 280 EDLRS-QNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++ N+ +++++++ +AH+L Y MQ+ G+ D+ +YN +
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNL------YTEMQEKGIFPDLFTYNCM 290
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C +G AQ + E+ LE K + +V TYS ++ + + + A ++ ++ML
Sbjct: 291 IDGFCSSGRWSEAQRLLQEM--LERK--INPNVVTYSALINAYVKERKFFEAEELYDEML 346
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PNTIT++S+I+ ++ A H+F M GC P+ N L+ A + D
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRID 406
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L T+ L D
Sbjct: 407 DGTELLHEM----TETGLVAD--------------------------------------- 423
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TTTYN L+ C D L +M + G+ P+ ++ L+D +G ++ AL
Sbjct: 424 ----TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479
Query: 569 QILKIMRE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ K M++ +G+ PDV Y I + + +A L++EM H I PN
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+TY +++ + L E Q ++ M + + L+ +C+ G + D
Sbjct: 540 TITYSSMINGLCKQSRLDEATQ---MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 61/394 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ ++ FN LM V + +Y+ M++ + D+ S+NIL+K C
Sbjct: 64 LFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFC 123
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A +G++ L + DV T+ST++ AL D+
Sbjct: 124 SCSKLPFALSTFGKITKLG----FQPDVVTFSTLLHGLCVEDRVSEAL----DLFHQMCR 175
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L+N G V +A+ L + M++ G +PN ++ + A L
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R ++ M H KP
Sbjct: 236 LR--------------------KMEEMSH--------------------------IKPNV 249
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y+ ++ D A L EM+ G+ P+ ++ +ID SG A ++L+
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E ++P+VV Y+ I V+ ++ +A L++EM I PN +TY +++ +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L + V M G + LI+ +C
Sbjct: 370 LDAAEHMFYV---MATKGCSPDVFTFNTLIDGYC 400
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
I+P I + + + F K+ L +A + SP+++ T+ID G CG
Sbjct: 350 IIPNT-ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID--GYCGAKRID 406
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ ++ + + +N+L++ DL L++ + M GV D+ + N LL
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 332 KACCLAGNTVLAQEIYGEVKH----LEA----KGVLKLDVFTYSTIVKVFADAKWWQMAL 383
C G A E++ ++ L+A GV + DV TY+ ++ + + A
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV-EPDVQTYNILISGLINEGKFLEAE 525
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ ++M G+ PNTIT+SS+IN +++A +F+ M P+ N L+
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585
Query: 444 VEACQFDRAFRLF 456
+A + D LF
Sbjct: 586 CKAGRVDDGLELF 598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 46/242 (19%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD + + + + S V +I N+L++ + LK LE++K MQK
Sbjct: 433 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 492
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------- 352
GV D+ +YNIL+ G + A+E+Y E+ H
Sbjct: 493 DASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCK 552
Query: 353 ----------LEAKGV--LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ G DV T++T+V + A L++ +M G+ + IT
Sbjct: 553 QSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAIT 612
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +LI+ G + A+ +F+EM+ +G P++ +L + RA +
Sbjct: 613 YITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Query: 461 LS 462
+S
Sbjct: 673 MS 674
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 181/414 (43%), Gaps = 47/414 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ +I I G + ++ + +++ + ++ N+ +N+L+N + KF E+
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M G++ + +YN ++ C A++++ +L A DVFT++T++
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTLID 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ CN LL + + A +F++ SK + ++G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
I + + YITL+ + G+ + L ++Q+M +G + ++ ++
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGN---INGALDIFQEMISSGVYPDTITIRNML 656
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 151/394 (38%), Gaps = 61/394 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ ++ FN LM V + +Y+ M++ + D+ S+ IL+K C
Sbjct: 68 LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A +G++ L L DV T++T++ AL D+
Sbjct: 128 SCSKLPFALSTFGKLTKLG----LHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQICR 179
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+++L+N G V +A+ L + M++ G +P+ + + A L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R ++ + H KP
Sbjct: 240 LR--------------------KMEEISH--------------------------IKPNV 253
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y+ ++ C D + L EM+ G+ PN +++ +I SG A ++L+
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E +SP+VV Y I V+ + +A L++EM I PN +TY +++ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L + ++ M G + LI+ +C
Sbjct: 374 LDAAED---MFYLMATKGCSPDVFTFTTLIDGYC 404
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 142/373 (38%), Gaps = 64/373 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ ++++ +M + + + +N L+ A L +Y + +E K + + D++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY---QKMERKQI-RCDIY 117
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ ++K F AL + G+ P+ +T+++L++ V +A+ LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
C P+ L+ R R+ + L V G
Sbjct: 178 ----CRPDVLTFTTLMNGLC------REGRVVEAVALLDRMVENG--------------- 212
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+P TY + C D L+ +M +
Sbjct: 213 --------------------------LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 543 G-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ PN + ++ +ID G + + M++ G+ P++V Y I S R
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L +EM +I PN+VTY L+ A + G E + +Y +M G N
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE---LYDEMLPRGIIPNTITYNS 363
Query: 662 LIEEWCEGVIQDK 674
+I+ +C+ QD+
Sbjct: 364 MIDGFCK---QDR 373
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A +K E +K M K G ++ YN+LL C +G A ++ E+K
Sbjct: 162 QAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP--- 218
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+T++ A+ + K+ E M +AG PN IT+S+LI+ G +E+A+ +
Sbjct: 219 -DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTD 477
F ML+AGC+PN L+ A + +A LF T + VA G
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 337
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
R +M+ +K Y +PT T+N L+ C R L
Sbjct: 338 R-GSMDEAEKL-------------YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM T GL+ + ++ ILI + ++ AL++ K MRE D V+ + + +
Sbjct: 384 VAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 443
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + QA+++FE + PN T+ L + + G + + Q+ +
Sbjct: 444 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 26/393 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R +N+ N++ ++S++ V + + +V + M G D+ ++N +++ + N
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E+Y +H+ G K D +Y ++ A +LK+ +M+ G TP+
Sbjct: 61 MEKAREVY---QHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQ 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+SSL+ A A A V+ A LF+EM++ G P+ L+ +A + A F+
Sbjct: 117 AYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
Q N + + H + ++ + + K S P TYN
Sbjct: 177 PKHGCQP--------NVPVYNVLLH----GLCSSGQLEQANTLFAEMKSHSCSPDVVTYN 224
Query: 520 ILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ A C RV+ L MR G PN I+++ LI +G +E AL++ M E
Sbjct: 225 TLLDAVCKA-RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 283
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P+ YTT I R++++ QA LFE+M I P+ V Y +L+ + GS+ E
Sbjct: 284 AGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 343
Query: 637 VQQCLAVYQDM-WKAGYKANDTYLKELIEEWCE 668
++ +Y++M AG + LI+ +C+
Sbjct: 344 AEK---LYREMSGGAGLQPTIVTFNTLIDGFCK 373
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 17/316 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VFTYS+I+K + + KV E+M++AG P+ ++ ++ A + +E+A ++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M+++G +P++ +IL+ + + D + ++ S + + Q + Y ++
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL-SEMVMRGQTPSMQAYSSLVRALAK 127
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR-VKALMNEMR 540
D S + + H+ R F Y +++ C + +M
Sbjct: 128 ARRVDHAS-SLFDEMIRGGHHPD---RLMF------YELILGLCQAGKVKDASERFKQMP 177
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN + +L+ SG +E A + M+ SPDVV Y T + +++R++
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+ LFE M+ PN++T+ TL+ R G E+++ L V+ M +AG K N
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG---ELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 661 ELIEEWC--EGVIQDK 674
LI C E VIQ +
Sbjct: 295 TLISGLCRAEKVIQAR 310
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 174/437 (39%), Gaps = 108/437 (24%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+S + E++ + +++ FN +M +++++ EVY++M + G D SY+IL+
Sbjct: 28 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 87
Query: 332 KACCLAGN-----TVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
G +L++ + G+ ++A YS++V+ A A+ A +
Sbjct: 88 HGLAKIGKLDESLKILSEMVMRGQTPSMQA----------YSSLVRALAKARRVDHASSL 137
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+ G P+ + + LI AG V+ A F++M + GC+PN N+LL
Sbjct: 138 FDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCS 197
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ Q ++A LF
Sbjct: 198 SGQLEQANTLFAEM---------------------------------------------- 211
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSG 562
K S P TYN L+ A C RV+ L MR G PN I+++ LI +G
Sbjct: 212 -KSHSCSPDVVTYNTLLDAVCKAR-RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM------------- 609
+E AL++ M E G P+ YTT I R++++ QA LFE+M
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYN 329
Query: 610 ----------------KHYQ-------IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
K Y+ +QP +VT+ TL+ + G L + +A +
Sbjct: 330 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA---E 386
Query: 647 MWKAGYKANDTYLKELI 663
M G A+ + LI
Sbjct: 387 MGTKGLAADSCTYRILI 403
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 113/230 (49%), Gaps = 17/230 (7%)
Query: 237 LVSALRAYDASK------KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
L A + DAS+ KH PN+ + ++ G+C G ++ ++ +++S + +
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLH--GLCSSGQLEQANTLFAEMKSHSCS 217
Query: 289 LNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ +N+L++ A ++ ++++ M+ G + ++ +++ L+ C G A E+
Sbjct: 218 PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+G + LEA K + +TY+T++ A+ A ++ E M A + P+ + ++SLI
Sbjct: 278 FGSM--LEAG--CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333
Query: 407 ACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G +++A L+ EM AG +P N L+ + + RA L
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
A+R A VP I F + + +L AL + + + PN Y T+I G+C
Sbjct: 245 AMRAAGYVPNV-ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS--GLC 301
Query: 270 --GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ-KLGVMADM 324
+++R ++E + + + +NSL+ + ++Y+ M G+ +
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++N L+ C G A E+ E + KG L D TY ++ + A AL+
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAE---MGTKG-LAADSCTYRILIAGLSRATKLDEALE 417
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V + M + ++ S + G ++QA +FE ++G PN + IL ++ +
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 477
Query: 445 EACQFDRAFRLF 456
+ + + A +L
Sbjct: 478 KLGRVEDAQKLM 489
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 232/540 (42%), Gaps = 71/540 (13%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+I+ N+ + EF K ++S + +K P++ ++D GD + A+
Sbjct: 99 NIMVHNYCKALEFDKVDAVISEM------EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S+ + I +NS++ + EV+K M GV D+ S+ IL+ C
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A +IY E++H +G+ K D+ ++S ++ +FA A+ +M G+ P
Sbjct: 213 VGEIEEALKIYKEMRH---RGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-------------- 442
+ + ++ +I AGL+ A+ + +EM+ GC P+ N LL
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 443 ----------------------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
C+E + D+A +LF + + + + Y+ D +
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEG-KLDKALQLFDTMLNQRLRPDI-VTYNTLIDGMC 386
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
DK N + R F P TY+IL+ + C A ++E
Sbjct: 387 RQGDLDKA----------NDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLDE 435
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ PN +++ +I SGNV + L+ M + +SPD++ Y T I ++ +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-T 657
+ AF L M+ ++QP++VTY L+ S +G+ VQ+ +++ M G + + T
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN---VQEAGWIFEKMCAKGIEPDRYT 552
Query: 658 YLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
Y+ + G ++ Q E + +R +R + ++ V + + + + +DL+
Sbjct: 553 YMSMINGHVTAGNSKEAFQLHDE--MLQRGKEKRRAAGTVQFVNIQNSAESLKQMPMDLK 610
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 172/405 (42%), Gaps = 29/405 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +KG LK + TY++++K + W A +V ++M GV P
Sbjct: 143 AGDAEAAMAL---VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI G +E+A+ +++EM G +P+ + L+ + D A
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R R + L V G + + + V + P
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFC----------RAGLMSDALRVRDEMVGC-----GCLP 303
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEMR G+ P+ ++T LI G ++ ALQ+
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
G +V+ +M G N +I+ +C K Q
Sbjct: 424 G---QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 18/247 (7%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + L AL+ +D P++ T+ID G+C GD K
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID--GMCRQGDLDK 393
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNIL 330
+ +++D+ S+ + N ++ L +++H K +E M G++ ++ +YN +
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSIL--IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKED 388
+K C +GN Q K L+ V K+ D+ TY+T++ + A K+
Sbjct: 452 IKGYCRSGNVSKGQ------KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V P+ +T++ LIN + G V++A +FE+M G EP+ ++ V A
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565
Query: 449 FDRAFRL 455
AF+L
Sbjct: 566 SKEAFQL 572
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 155/353 (43%), Gaps = 29/353 (8%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R G D V K++++ GVAP D F +L R+ GE+E +++ +E
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAP----DVRSFTILIGGFCRV---GEIEE---ALKIYKEM 226
Query: 185 R-LPVKELDEEFR-IVQLCVNKPDVNLAIRY----AC--IVPRADILFCNFVREFGKKRD 236
R +K F ++ L + ++ A+ Y C +VP +++ + F +
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCRAGL 285
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVF 294
+ ALR D P++ T+++ G+C + + + + ++R + V ++ F
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLN--GLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ + K L+++ M + D+ +YN L+ C G+ A +++ ++
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
E + + TYS ++ + + A ++M++ G+ PN +T++S+I +G
Sbjct: 404 RE----IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 459
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
V + ++M+ P+ N L+ ++ + AF+L K Q
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 512
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 182/417 (43%), Gaps = 47/417 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ +I I G + ++ + +++ + ++ N+ +N+L+N + KF E+
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M G++ + +YN ++ C A++++ +L A DVFT++T++
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTLID 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ CN LL + + A +F++ SK + ++G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
I + + YITL+ + G+ + L ++Q+M +G + ++ ++ +
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGN---INGALDIFQEMISSGVYPDTITIRNMLTGF 659
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 151/394 (38%), Gaps = 61/394 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ ++ FN LM V + +Y+ M++ + D+ S+ IL+K C
Sbjct: 68 LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A +G++ L L DV T++T++ AL D+
Sbjct: 128 SCSKLPFALSTFGKLTKLG----LHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQICR 179
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+++L+N G V +A+ L + M++ G +P+ + + A L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R ++ + H KP
Sbjct: 240 LR--------------------KMEEISH--------------------------IKPNV 253
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y+ ++ C D + L EM+ G+ PN +++ +I SG A ++L+
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E +SP+VV Y I V+ + +A L++EM I PN +TY +++ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L + ++ M G + LI+ +C
Sbjct: 374 LDAAED---MFYLMATKGCSPDVFTFTTLIDGYC 404
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 142/373 (38%), Gaps = 64/373 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ ++++ +M + + + +N L+ A L +Y + +E K + + D++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY---QKMERKQI-RCDIY 117
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ ++K F AL + G+ P+ +T+++L++ V +A+ LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
C P+ L+ R R+ + L V G
Sbjct: 178 ----CRPDVLTFTTLMNGLC------REGRVVEAVALLDRMVENG--------------- 212
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+P TY + C D L+ +M +
Sbjct: 213 --------------------------LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 543 G-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ PN + ++ +ID G + + M++ G+ P++V Y I S R
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L +EM +I PN+VTY L+ A + G E + +Y +M G N
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE---LYDEMLPRGIIPNTITYNS 363
Query: 662 LIEEWCEGVIQDK 674
+I+ +C+ QD+
Sbjct: 364 MIDGFCK---QDR 373
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 291 IYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + KF + +Y NM+K G++ ++ +YNILLKA C A +++
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 349 EVKH--------------------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
E+ + E G K V Y+ ++ ++A
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVA 263
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K+ +M+ GV PN +++S +IN+ +G VE A LF +M GC+ N L++
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
C + A L++ + VA G S E +PN
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 500 -SHYSSFDKRFS-------------------FKPTTTTYNILMKACCTD--YYRVKALMN 537
+ YS F+ +P TY ++ C + + + +L+
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G +PN I++ I G+G VE A+++L+ M+ G P++ Y + R
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ ++AF LF+E++ +QPNLVTY T+L SR G + E Q
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 174/426 (40%), Gaps = 83/426 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
I C+ ++ F F + F LR DA N++ +I C + G
Sbjct: 286 INSLCVSGNVELAFALFAQMF---------LRGCDA--------NIHTFTPLIKGCFMRG 328
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++ + N+ +N+L++ + L+ L+V MQ+ G + ++ +Y+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ +G+ V A E + + + G + +V TY+ +V V + A + E
Sbjct: 389 ILIDGFAKSGDLVGASETW---NRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G TPNTIT+++ I G VE AM L E M GC PN N LL A +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++ AF LF+ +E ++ Q PN V
Sbjct: 505 YEEAFGLFQE-----------------------IEARNLQ-----PNLV----------- 525
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGS 561
TYN ++ + +M E + G +P+ I++ +I A
Sbjct: 526 --------TYNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 562 GNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A Q++ ++ PD++ YT+ I +++A + ++ + I PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 621 YITLLR 626
+ L+R
Sbjct: 633 WNALVR 638
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 154/390 (39%), Gaps = 60/390 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ II+ + G+ + A++ + + NI+ F L+ L L++
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M + G ++ +YN L+ C G+ A ++ ++ G L +V TYS ++
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV---CDQMQRSGCLP-NVTTYSILID 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA + A + M+S G PN +T++ +++ + +QA L E+M GC P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N ++ + + A +L E G+
Sbjct: 453 NTITFNTFIKGLCGNGRVEWAMKLL-------------ERMQGH---------------- 483
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
P TTYN L+ A Y L E+ L PN +
Sbjct: 484 ------------------GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE- 608
++ ++ +G + ALQ+ G +PD + Y T I + ++K A L E
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Query: 609 --MKHYQIQPNLVTYITLLRARSRYGSLHE 636
MK + P+++TY +L+ + ++ E
Sbjct: 586 SSMKEW--HPDIITYTSLIWGACNWMNIEE 613
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 121/308 (39%), Gaps = 59/308 (19%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K V Y+ ++ +QM + +M G+ PN T++ L+ A V+ A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM GC P++ ++ + +A + D A L
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------------------------ 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
RF KP+ YN L+ C + R++ L+
Sbjct: 237 --------------------------AGRF--KPSVPVYNALIDGMCKE-GRIEVAIKLL 267
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G+ PN +S++ +I++ SGNVE A + M G ++ +T IK C
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+L +A L++ M +PN+V Y TL+ GSL E Q V M ++G N
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ---VCDQMQRSGCLPNV 384
Query: 657 TYLKELIE 664
T LI+
Sbjct: 385 TTYSILID 392
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F F++ + A++ + + H PN+ ++D Y ++ ++++
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++N+ N+ +N+++ A + L+++ G D +YN ++ A C G
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPN 397
+A ++ V ++ D+ TY+++ ++ W + A+ + ++ G+ PN
Sbjct: 575 VKIAAQLVERVSSMKE---WHPDIITYTSL--IWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAG 428
TW++L+ ++ +H+ +++L+ G
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
Query: 502 YSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S+ +F+ T +TY +++ + C D V+ ++ +M+ G++ + +I+
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDM--VQYILQQMKMDGINCCEDLFICIING 118
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ E AL++ + E G P V Y + + + + L+ MK + PN
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ TY LL+A + + + ++ +M G + ++ C+ G I D +
Sbjct: 179 VFTYNILLKALCKNDRVDAAHK---LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 677 NQG 679
G
Sbjct: 236 LAG 238
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 188/429 (43%), Gaps = 41/429 (9%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ F K+ L + ++ + SP+ +ID G ++ +YE++ S +
Sbjct: 15 LKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGL 74
Query: 288 TLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+IY +NSL+N + K +E++K M + G D+ +Y+ ++ C G A E
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + H + + Y+ ++ + + A K+ E+M S G P+ IT+++++
Sbjct: 135 M---LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTIL 191
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------ 459
+ G V +A F+ M G P+ N LL A + + D A +LF+
Sbjct: 192 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 460 --TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T++ + LG N D M K S P T
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVAS--------------------GCAPNGAT 291
Query: 518 YNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y+I++ C D ++V + EM +G P+ +++ IL+D + V+ A ++
Sbjct: 292 YSIVLSGHCRAKKVDDAHKV---LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M ++G +PD+V+Y+ + ++ ++ A LF+ M ++ P++VT+ L+ + G
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408
Query: 633 SLHEVQQCL 641
L E + L
Sbjct: 409 KLDEAKDLL 417
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 20/296 (6%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+T+ ++K F + K+ E ML G++P+ I ++ LI+ A G V++A L+EE
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+ G EP+ N LL A + + A LF++ + D + IS +
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM----AEKGFEPDVVTYSTIISGLC 124
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
K V + F K T YN L+ C D R L+ EM
Sbjct: 125 KTGK---------VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G P++I++ ++ G V A Q M G SPDVVAY + + +
Sbjct: 176 ASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+A LF+++ P+ VTY ++L +R ++ E ++ +++ M +G N
Sbjct: 236 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE---MFKKMVASGCAPN 288
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 513 PTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T+ +++K+ C D Y+ L +M G+SP+ I + ILID G V+ A
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYK---LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ + M G+ P + Y + + + ++K+A LF+ M +P++VTY T++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G + E + L + M + G AN LI C+
Sbjct: 123 LCKTGKVTEALEML--FHKMIERGCSANTVAYNALINGLCK 161
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 6/225 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + +D+ SP++ ++D G ++ +++D+ ++ + +NS++
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262
Query: 300 VNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A ++ E++K M G + A+Y+I+L C A A ++ E+ + A
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
DV TY+ ++ A ++ M+ G P+ +++S ++N V A
Sbjct: 323 ----DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 378
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LF+ M++ P+ NIL+ +A + D A L T S
Sbjct: 379 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN ++ +++ + G + ++ + M ++G+SPD + Y I + R+ +A
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L+EEM ++P++ TY +LL A + + E + +++ M + G++ + +I
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME---LFKTMAEKGFEPDVVTYSTIIS 121
Query: 665 EWCE 668
C+
Sbjct: 122 GLCK 125
>gi|299469706|emb|CBN76560.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 915
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 43/379 (11%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAH 303
++ SPN + I C D + + D+R V N V N+ ++ +A
Sbjct: 354 RREGPSPNSQCYASAITACARAHDPRSAMRLLADMREDGVPPNDVVLNAAVDACGKGDAP 413
Query: 304 DLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D L++ + M+K GV + ++N + AG A+ + E+ +G LK D
Sbjct: 414 D--EALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAREAKALLNEMSE---RG-LKPD 467
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
F+++ ++ FA A + + ++M S G+ + +++ + ++ACA AG V+ A+ L +
Sbjct: 468 NFSFNAAMQGFAAAGDPRNTASLSDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALKLLK 527
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM +AG EPN+ N L AC A + A +L R + +T V
Sbjct: 528 EMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRK--MGETGVV--------------- 570
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVK 533
+D S T V S DK + P TYN M AC +
Sbjct: 571 --RDATSYTGA--IVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGNDRQ 626
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+NEMR G++PN IS++ + A G +G + L +L+ M +G+ D V Y A+
Sbjct: 627 AEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLPDVLSLLEEMHREGVEADEVTYHIAVD 686
Query: 592 VCVRSKRLKQAFSLFEEMK 610
++ L A LF EM+
Sbjct: 687 AASIARDLGCAMDLFREMR 705
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 176/478 (36%), Gaps = 93/478 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+ ++E K RD L A + K N +C I G G + ++ + + +
Sbjct: 191 MLAARIKELAKARDFEGMLEALEEGPK-----NAIVCTVAITCLGQAGKWREAVEVLDGM 245
Query: 283 -RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + F +NA + + ++ + ++ +M + + C G+ +
Sbjct: 246 GKGGDGSDRPDAFAYAATINACG-----KAGRPVEAVALLTEMPTRRVKPDVVCF-GSAI 299
Query: 342 LAQEIYGEVKHLE------AKGVLKLDVFTYSTIVKVFADAK---WWQMALKVKEDMLSA 392
A GEV + KG + I AD K + AL++ ++M
Sbjct: 300 FA---LGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRRE 356
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +PN+ ++S I ACA A AM L +M + G PN N + AC + D A
Sbjct: 357 GPSPNSQCYASAITACARAHDPRSAMRLLADMREDGVPPNDVVLNAAVDACGKGDAPDEA 416
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+L R +K + K
Sbjct: 417 LKLLR----------------------------------------------GMEKAYGVK 430
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T T+N + KAL+NEM GL P++ S+ + +G+ +
Sbjct: 431 PNTVTFNSAISGLSRAGRAREAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASL 490
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G+ DVV+Y TA+ C ++ +K A L +EM+ ++PN V Y + L A R
Sbjct: 491 SDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGR 550
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
G K + L+++ E GV++D G + C R
Sbjct: 551 AGK------------------PKVAEKLLRKMGE---TGVVRDATSYTGAIVACSRNG 587
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 186/484 (38%), Gaps = 88/484 (18%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ GK R+ V L P+ + I+ CG G +++ A+ ++ ++ V
Sbjct: 231 QAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKP 290
Query: 290 NIYVFNSLM---------------------------------------NVNAHDLKFTLE 310
++ F S + AH+ LE
Sbjct: 291 DVVCFGSAIFALGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEK--ALE 348
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M++ G + Y + AC A + A + +++ GV DV + V
Sbjct: 349 LIQEMRREGPSPNSQCYASAITACARAHDPRSAMRLLADMRE---DGVPPNDVV-LNAAV 404
Query: 371 KVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ALK+ M A GV PNT+T++S I+ + AG +A L EM + G
Sbjct: 405 DACGKGDAPDEALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAREAKALLNEMSERGL 464
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTD 477
+P++ N +Q A L S+ + + A D G
Sbjct: 465 KPDNFSFNAAMQGFAAAGDPRNTASLSDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALK 524
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKAL 535
+ M+ +P T YN + AC + L
Sbjct: 525 LLKEMQEA------------------------GVEPNTVVYNSALDACGRAGKPKVAEKL 560
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M G+ + S+T I AC +G+ + AL+ L+ M ++G++P+ + Y A+ C R
Sbjct: 561 LRKMGETGVVRDATSYTGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGR 620
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
S +QA L EM+ + PN ++Y + A + G L +V L++ ++M + G +A+
Sbjct: 621 SGNDRQAEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLPDV---LSLLEEMHREGVEAD 677
Query: 656 D-TY 658
+ TY
Sbjct: 678 EVTY 681
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V K D+ AL+ ++ PN + + +D CG G + +
Sbjct: 504 VSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRK 563
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V + + + + D LE + M K G+ + +YN + AC +GN
Sbjct: 564 MGETGVVRDATSYTGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGN 623
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + E++ +GV + +YS + A L + E+M GV + +
Sbjct: 624 DRQAEWLLNEMR---GQGVTP-NRISYSAAMFALGKAGRLPDVLSLLEEMHREGVEADEV 679
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+ ++A + A + AM LF EM G
Sbjct: 680 TYHIAVDAASIARDLGCAMDLFREMRARG 708
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 184/421 (43%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ A+ +++ S + N ++ L+N ++ HD ++++M K G+ D A Y
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I+ +K K ++ T+ I++ FA A + AL +
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMK----KERMQPSNRTFRPIIEGFAVAGDMKRALDTLD 557
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + ++M AG PN I+++ +
Sbjct: 558 LMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASG 617
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 618 DIGKAFEYF-------TKI----------------------------------------K 630
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 631 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 690
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ +T+ I C ++ +++A ++ +EM ++PN+ T+ TL+
Sbjct: 691 EAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 750
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ + + + L +++M AG K ++ L+ + + + G +++C
Sbjct: 751 KG---WAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVC 807
Query: 685 R 685
R
Sbjct: 808 R 808
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 204/500 (40%), Gaps = 100/500 (20%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +RA +E++R++ + N +VF SL++ A D++ L + M+ G+ + +Y
Sbjct: 267 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTY 326
Query: 328 NILL-----------------------------------KACCLAGNTVLAQEIYGEVKH 352
+IL+ A C +GN A+E+ V+
Sbjct: 327 SILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEEL---VRE 383
Query: 353 LEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E G+ +DV Y +++ + A+ + L V E + G P+ I++ LIN
Sbjct: 384 MEEDGIDAPIDV--YHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKI 441
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA---- 467
G V +A+ + +EM G + N++ ++L+ + F AF +F S Q
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 468 --LGEDY--DGNTDRISNMEHKDKQSITNTPN--FVP-----------NSHYSSFD--KR 508
L E + GN DR + + K+ N F P + D +R
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561
Query: 509 FSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYN L+ + R +++++M G++PN ++TI++ SG++
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 621
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + ++E G+ DV Y T ++ C +S R++ A ++ EM +I N Y L+
Sbjct: 622 AFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID 681
Query: 627 ARSRYGSLHE--------------------------------VQQCLAVYQDMWKAGYKA 654
+R G + E +Q+ V Q+M G K
Sbjct: 682 GWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKP 741
Query: 655 NDTYLKELIEEWCEGVIQDK 674
N LI+ W + + D+
Sbjct: 742 NVKTFTTLIKGWAKVSLPDR 761
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K ++ A+R ++ KK P+ R II+ + GD ++ + +R
Sbjct: 504 LVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSG 563
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 564 CAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 623
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K + LKLDV+ Y T+++ + Q AL V +M + NT ++ L
Sbjct: 624 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 679
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 680 IDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRA 727
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 178/411 (43%), Gaps = 37/411 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G+C G +R + +D+ V+LN +NSL++ V D E+ + M+ G+
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGI 243
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
A + +Y IL+ + A + + ++ E+K G DV+ Y+ ++ + A +
Sbjct: 244 EATVGTYTILVDSLSTARDISKVEALFNEMKANNVVG----DVYLYTAVINAYCRAGNMR 299
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A KV ++ + GV PN T+ LIN G +E A L +M G N N ++
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNM-EHKDKQSITNTP 494
D A ++ + K V L + Y NT R++ + E K I
Sbjct: 360 DGYCRKGMVDDALKI--KAAMEKMGVEL-DIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
VPN TY L+ C D V+A L EM G +P+ +++
Sbjct: 417 GVVPN---------------YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 461
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ID G++ A + K M + G PDV Y + + + ++ A LFEEMK
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+PN+V Y L+ ++ G + +Y DM KAG +D+ L+
Sbjct: 522 GTEPNVVAYTALISGLAKEG---RSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 156/383 (40%), Gaps = 71/383 (18%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
++D D K A++ ++++ NV ++Y++ +++N A +++ +V G
Sbjct: 253 LVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNG 312
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + +Y +L+ C G A+ + + ++ +GV L+ ++T++ +
Sbjct: 313 VEPNERTYGVLINGFCKIGQMEAAEMLLAD---MQGQGV-GLNQIIFNTMIDGYCRKGMV 368
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
ALK+K M GV + T+++L +++A L M++ G PN L
Sbjct: 369 DDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTL 428
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + A RLFR E +K + TP+ V
Sbjct: 429 ISIHCKDGDMVEARRLFR-------------------------EMAEKGA---TPSVV-- 458
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-------LMNEMRTVGLSPNHISWT 552
TYN+++ D Y K EM G P+ ++
Sbjct: 459 -----------------TYNVMI-----DGYTKKGSIREAERFRKEMEKKGFVPDVYTYA 496
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+ +G V+ AL++ + M++ G P+VVAYT I + R + AF L+++M
Sbjct: 497 SLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKA 556
Query: 613 QIQPNLVTYITLLRARSRYGSLH 635
+ P+ Y L+ GSLH
Sbjct: 557 GLIPDDSLYSALV------GSLH 573
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 255 NMYICRTIID-VC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF 307
N I T+ID C G+ D +K +A E + V L+IY +N+L VN D
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKM---GVELDIYTYNTLACGLCRVNRLDEAK 407
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
TL M ++GV+ + +Y L+ C G+ V A+ ++ E+ KG V TY+
Sbjct: 408 TL--LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE---KGATP-SVVTYN 461
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQ 426
++ + + A + +++M G P+ T++SL++ C N G V+ A+ LFEEM Q
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVN-GKVDVALKLFEEMKQ 520
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G EPN L+ + + + AF+L+
Sbjct: 521 RGTEPNVVAYTALISGLAKEGRSEAAFQLY 550
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + GD +++R ++ ++ + T ++ +N +++ ++
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K G + D+ +Y L+ C+ G +A +++ E+K +G + +V Y+ ++
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ---RGT-EPNVVAYTALIS 535
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML AG+ P+ +S+L+ +
Sbjct: 536 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGS 571
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D RV+ ++ M G+ ++TIL+D+ + ++ + M+ + + DV YT
Sbjct: 227 DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYT 286
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I R+ +++A + +E ++PN TY L+ + G + + LA DM
Sbjct: 287 AVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA---DM 343
Query: 648 WKAGYKANDTYLKELIEEWC-EGVIQD 673
G N +I+ +C +G++ D
Sbjct: 344 QGQGVGLNQIIFNTMIDGYCRKGMVDD 370
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 59/419 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + + ++ A R DA + P+ Y ++I G+C G ++ +++
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDK 322
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N +N+L++ N DL+ M K G+M +++YN+L+ A + G
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +
Sbjct: 383 MGEADDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D++S+ P T+N
Sbjct: 499 --------------------------DRKSVP---------------------PDEVTFN 511
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + L++EM+ G+ P+HIS+ LI G G+++ A ++ M
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P ++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 51/419 (12%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + I + + N L+++ + +N ++ + L Y M +L + + + ++N
Sbjct: 179 CFYMMKEKGIVPKIETCNDMLSLF-----LKLNRMEMAWVL--YAEMFRLRISSTVYTFN 231
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A+E G +E G K +V +Y+TI+ ++ + A ++ +
Sbjct: 232 IMVNVLCKEGKLKKAREFIG---FMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDA 287
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P++ T+ SLI+ G +E+A LF++M++ G PN+ N L+
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNM--EHKDKQSITNTPNFV 497
+RAF +R + K + Y +G +M E + K I
Sbjct: 348 LERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII------- 399
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
P TYNIL+ C + + L NEM + G+ P H+++T LI
Sbjct: 400 ---------------PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
++ A + + + + G+SPDV+ + + + +++AF L +EM +
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
P+ VT+ TL++ R R G + E + L +M + G K + LI + G I+D
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLL---DEMKRRGIKPDHISYNTLISGYGRRGDIKD 560
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLE-----LFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY---CNKGDLERAFSYRDEMVKKGIMP 365
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 366 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 414
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A +A+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ V+ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 475 FNAM--VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A +V+++MLS G P +T+++LI
Sbjct: 533 MKR---RGI-KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPD 611
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 182/421 (43%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ AI +++ S + N ++ L+N ++ HD ++++M K G+ D A Y
Sbjct: 440 GKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 499
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I+ ++ K ++ T+ I++ FA A + A +
Sbjct: 500 NLLVEAFCKMGNMDRAIRIFERMQ----KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLD 555
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + ++M AG PN I+++ +
Sbjct: 556 LMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASG 615
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 616 DIGKAFEYF-------TKI----------------------------------------K 628
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 629 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 688
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +LK M+EDG+ P++ +T+ I C ++ +++A ++ +EM ++PN+ T+ TL+
Sbjct: 689 EAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 748
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ +R +C +++M AG K ++ L+ + + + G ++C
Sbjct: 749 KGWARVSLPDRALKC---FEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVC 805
Query: 685 R 685
R
Sbjct: 806 R 806
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 206/501 (41%), Gaps = 77/501 (15%)
Query: 229 REFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
REFG K+ D A ++ + PN ++ +++ + GD + + E+
Sbjct: 252 REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEE 311
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAG 338
++S+ + + + ++ L++ +D + ++K + KL + + NI + A C +G
Sbjct: 312 MKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNI-IHAHCQSG 370
Query: 339 NTVLAQEIYGEVKHLEAKGV----------------------------------LKLDVF 364
N A+E+ V+ +E G+ K +
Sbjct: 371 NMDRAEEL---VREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y ++ ++ A+ + ++M S G+ N T+S LIN + A +FE+M
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 487
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+++G +P+ N+L++A + DRA R+F + M+
Sbjct: 488 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKER------------------MQP 529
Query: 485 KDKQSITNTPNF-VPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ F V +FD +R PT TYN L+ + KA ++
Sbjct: 530 SNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVL 589
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
++M G++PN ++TI++ SG++ A + ++E G+ DV Y T ++ C +S
Sbjct: 590 DKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 649
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R++ A ++ EM +I N Y L+ +R G + E L + M + G N
Sbjct: 650 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLL---KQMKEDGIPPNI 706
Query: 657 TYLKELIEEWCEGVIQDKNQN 677
I C+ + +N
Sbjct: 707 HTFTSYINACCKAGDMQRAEN 727
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K ++ A+R ++ +K P+ R II+ + GD ++ + +R
Sbjct: 502 LVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSG 561
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 562 CAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 621
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K + LKLDV+ Y T+++ + Q AL V +M + NT ++ L
Sbjct: 622 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 677
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 678 IDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRA 725
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 608 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 667
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ G+ ++ ++ + ACC AG+ A+
Sbjct: 668 PRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAEN 727
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ A LK +V T++T++K +A ALK E+M SAG+ P+ + L+
Sbjct: 728 VIQEM----ADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 783
Query: 406 NA 407
+
Sbjct: 784 TS 785
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 19/367 (5%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M +LG + D SY I+LK C + A ++ + E GV DV TY+T++
Sbjct: 68 RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEE--GVCSPDVVTYNTVIHG 125
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F A + +M+ G P+ +T +S+INA A V+ A L +M+ G PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
++ +++ A ++FR T + + ++ D + + K++
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMT-GRGLIPDIVSWNSFMDSLCK-HGRSKEAAEI 243
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+ H +P TY IL+ T+ + + + N M+ G+ N +
Sbjct: 244 FYSMAAKGH----------RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+TILIDA G ++ A+ IL M+ G+SPDV Y+T I R RL A F +M
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EG 669
+QPN V Y +L++ +G L + ++ VY+ M + N + ++ C EG
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKE--LVYEMMNNGIPRPNIAFFNSIVHSICKEG 411
Query: 670 VIQDKNQ 676
+ D +
Sbjct: 412 RVMDAHH 418
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 28/342 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ M G++ D+ S+N + + C G + A EI+ + AKG + ++ TY +
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF---YSMAAKG-HRPNIVTYGIL 262
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + + M G+ N + ++ LI+A A G++++AM + EM G
Sbjct: 263 LHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGL 322
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ + L+ A C+ R + + K +G NT + H Q
Sbjct: 323 SPDVFTYSTLISA---LCRMGRL-----ADAVDKFNQMIGTGVQPNT----VVYHSLIQG 370
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ V Y + +P +N ++ + C + + A + + ++ +G
Sbjct: 371 FCTHGDLVKAKELVYEMMNNGIP-RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER 429
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ I + LID G + A +L M G+ PD Y T + +S R+ +L
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGS-------LHEVQQC 640
F EM +I+P VTY +L R G LHE+ C
Sbjct: 490 FREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 151/367 (41%), Gaps = 25/367 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F + + K+ + A+ + SP+++ T+I G + +
Sbjct: 292 LVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQ 351
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV-MADMASYNILLKACCLAG 338
+ V N V++SL+ DL E+ M G+ ++A +N ++ + C G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A I+ VK + + D+ ++T++ + A V + M+SAG+ P+T
Sbjct: 412 RVMDAHHIFDLVKDIGERS----DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++L+N +G ++ ++LF EM +P + NI+L A + A ++
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTT 516
T V+L Y+ + D+ + F K + K T
Sbjct: 528 MIGCGTTVSL-PTYNIILKGLCRNNCTDEAIVM-------------FQKLCTMNVKFNIT 573
Query: 517 TYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T N ++ + T R K L + + GL PN ++ I+I G+VE A + M
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633
Query: 575 REDGMSP 581
+ G +P
Sbjct: 634 EKSGCAP 640
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 136/354 (38%), Gaps = 59/354 (16%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+Y +++ CC A L +G + + LK D +T++K K A+KV
Sbjct: 10 TYGVVMNGCCRARRPELGLAFFGRL----LRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 386 K-EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML--QAGCEPNSQCCNILLQA 442
M G P+ +++ ++ + +QA+ L M + C P+ N ++
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
F+ +G + N+ H+ Q
Sbjct: 126 ------------FFK---------------EGKIGKACNLYHEMMQQ------------- 145
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+N ++ A C + L+ +M G+ PN +++T +I
Sbjct: 146 -------GFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYST 198
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G E A ++ + M G+ PD+V++ + + + R K+A +F M +PN+VT
Sbjct: 199 LGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVT 258
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
Y LL + G ++ ++ + M G AN LI+ + + + D+
Sbjct: 259 YGILLHGYATEGCFADM---MSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 168/421 (39%), Gaps = 39/421 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ + ++ NI + L++ A + F + + M+ G++A+ + IL+ A
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A I E ++ +G L DVFTYST++ A+ M+ GV
Sbjct: 303 KRGMMDEAMLILSE---MQGQG-LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGC-EPNSQCCNILLQACVEACQFDRAFR 454
PNT+ + SLI G + +A L EM+ G PN N ++ + + + A
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHY 502
+F RS + + G G + + M T T N + N ++
Sbjct: 419 IFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYF 478
Query: 503 SSF-------------DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
S DK+ KPTT TYNI++ V A +++EM G + +
Sbjct: 479 KSGRIDDGLNLFREMSDKKI--KPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I++ + + A+ + + + + ++ T I +R ++A LF
Sbjct: 537 LPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFS 596
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ + PN TY ++R + GS+ E ++ M K+G L + I
Sbjct: 597 AISDSGLVPNASTYGIMIRNLLKEGSVEEADN---MFSSMEKSGCAPCSRLLNDTIRTLL 653
Query: 668 E 668
E
Sbjct: 654 E 654
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 34/270 (12%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR +I F N V K+ ++ A +D K ++ + T+ID + G+ K+
Sbjct: 392 IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKA 451
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ + + S + + + +N+L+N + + L +++ M + +YNI+L
Sbjct: 452 FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDG 511
Query: 334 CCLAGNTVLAQEIYGEV-----------KHLEAKGV--------------------LKLD 362
AG TV AQ++ E+ ++ KG+ +K +
Sbjct: 512 LFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFN 571
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ T +T++ + + A + + +G+ PN T+ +I G VE+A ++F
Sbjct: 572 ITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFS 631
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA 452
M ++GC P S+ N ++ +E + +A
Sbjct: 632 SMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 42/156 (26%)
Query: 513 PTTTTYNILMKACC---------------------------------------TDYYRVK 533
PT TY ++M CC TD VK
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD-DAVK 64
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM-REDGM-SPDVVAYTTAIK 591
L+ M +G P+ S+ I++ + AL +L++M +E+G+ SPDVV Y T I
Sbjct: 65 VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ ++ +A +L+ EM P++VT+ +++ A
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINA 160
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 174/383 (45%), Gaps = 23/383 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N++M+ + ++ L ++ M++LG + S+N ++ C A +++
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E +EAK + D ++Y ++ A A A K+ + ML +G+TP+ +T++ +I+
Sbjct: 174 HE---MEAKDIPP-DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +++A+ LF+ M GC P+ NIL+ A + + D AFRL + T
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT------- 282
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DG+ + + + H + KPT T N L+ C
Sbjct: 283 ----DDGHVPDVVTYSTL-ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +++ M + G SP+ +++ L+ +G E A ++L M G++P+VV
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT + ++ RL +A +F +MK PNL TY L+ + S +V L ++
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG---FCSAGQVDGGLKLFG 454
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
+M AG + L E C+
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCK 477
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 24/366 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +NV+ + + + L++ A L +++ + GV +Y L+ C+A +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ ++ +G V TY+ ++ + A + + M+ G P+ +
Sbjct: 61 FDDARELFADMNR---RGCPPSPV-TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++++++ + VE+A+ LF EM + GC PN + N ++ + + D+A ++F
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTT 517
E D D S D + N Y F + P+ T
Sbjct: 177 ----------EAKDIPPDSWSYGILIDGLAKAGK----LNEAYKLFQRMLDSGITPSAVT 222
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+++ C Y +A L MR+ G P+ ++ ILIDA G ++ A ++LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+DG PDVV Y+T I R+ A L E+M Q +P +VT TL+ + G +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 636 EVQQCL 641
E ++ L
Sbjct: 343 EAREVL 348
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 185/443 (41%), Gaps = 36/443 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ + +ID G +R +++ L VT + + SL++ A+ E
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M + G +YN+++ A C G + +E +K + G + DV TY+T++
Sbjct: 67 LFADMNRRGCPPSPVTYNVMIDASCKRG---MLEEACDLIKKMIEDGHVP-DVVTYNTVM 122
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + AL + +M G TPN + +++I ++QA +F EM
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
P+S IL+ +A + + A++LF+ ++ + + L D +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
+M K + T N + ++H D+ F P TY+ L+ C+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 528 DYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
RV + L+ +M P ++ LI +G ++ A ++L M G SPDVV
Sbjct: 303 -IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R+ + ++A L +M + PN+VTY L+ + L E V+
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA---CGVF 418
Query: 645 QDMWKAGYKANDTYLKELIEEWC 667
M +G N LI +C
Sbjct: 419 AQMKSSGCAPNLFTYTALILGFC 441
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 162/386 (41%), Gaps = 42/386 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ ++ +PN TII G+C +A ++ ++ ++++ + + + L
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTII--LGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ A K E YK Q++ G+ +YN+++ CLA A E++ K +
Sbjct: 192 IDGLAKAGKLN-EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF---KSMR 247
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+KG + FT++ ++ A ++ + M G P+ +T+S+LI+ + V
Sbjct: 248 SKGC-RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQV 466
+ A HL E+M++ C+P N L+ +A + A + + S +
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G G T+R + S R P TY L+ C
Sbjct: 367 VHGHCRAGQTERAREL-------------------LSDMVAR-GLAPNVVTYTALVSGLC 406
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A + +M++ G +PN ++T LI +G V+G L++ M G+SPD V
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMK 610
Y T +S R +A + E +
Sbjct: 467 VYGTLAAELCKSGRSARALEILREGR 492
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + ED+ + + N+L++ A +K EV M G D+ +YN L+
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C AG T A+E+ + + A+G L +V TY+ +V A A V M S+
Sbjct: 369 GHCRAGQTERAREL---LSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+++LI +AG V+ + LF EM+ AG P+ L ++ + RA
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 453 FRLFRSWTLSKTQVALGED 471
+ R S A G++
Sbjct: 485 LEILREGRESLRSEAWGDE 503
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 174/410 (42%), Gaps = 35/410 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +RA+ +++ V LN +NSL++ V D E+ + M+ G+
Sbjct: 139 VDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGI 198
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
A + +Y IL+ + AG+ + + E+K G DV+ Y+ ++ + A +
Sbjct: 199 EATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG----DVYLYTAVINAYCRAGNVR 254
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ LIN G +E A L +M G N N ++
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTPN 495
D A ++ + K + L + Y NT R++ M
Sbjct: 315 DGYCRQGMVDNALKV--KAAMEKMGIEL-DVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
VP P TY L+ C D + L EM G P+ +++ +
Sbjct: 372 GVP--------------PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNV 417
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D G++ A + K M + G+ PDV Y + + + ++ A LFEEMKH
Sbjct: 418 MMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRG 477
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+PN+V Y L+ ++ G E Q +Y DM KAG +D+ L+
Sbjct: 478 TEPNVVAYTALISGLAKEGRSEEAFQ---LYDDMLKAGLTPDDSLYSALV 524
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 139/333 (41%), Gaps = 20/333 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
++D GD K A+ ++++++NV ++Y++ +++N A +++ EV+ G
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + +Y +L+ C G A+ + + ++ +GV + ++T++ +
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLAD---MQGRGVGHNQII-FNTMIDGYCRQGMV 323
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
ALKVK M G+ + T+++L + +A L M++ G PN L
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + A RLFR K + Y+ D + K SI F
Sbjct: 384 ISIHCKEGDMVEARRLFREMA-GKGAMPSVVTYNVMMD-----GYIKKGSIREAERF--- 434
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+K+ P TY L+ C + A L EM+ G PN +++T LI
Sbjct: 435 --RKEMEKK-GLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
G E A Q+ M + G++PD Y+ +
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I+F + + ++ + +AL+ A +K ++Y T+ CG+C +++ +
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL--ACGLCRVNRMAEAKTLL 365
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + V N + +L++++ D+ +++ M G M + +YN+++
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ A+ K +E KG++ DV+TY+++V +ALK+ E+M G PN
Sbjct: 426 GSIREAERFR---KEMEKKGLVP-DVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPN 481
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ +++LI+ A G E+A L+++ML+AG P+ + L+
Sbjct: 482 VVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 255 NMYICRTIID-VC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVN-AHDLK 306
N I T+ID C G+ + +K +A E + + L++Y +N+L VN + K
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKM---GIELDVYTYNTLACGLCRVNRMAEAK 362
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L + M + GV + +Y L+ C G+ V A+ ++ E + KG + V TY
Sbjct: 363 TLLHI---MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFRE---MAGKGAMP-SVVTY 415
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEML 425
+ ++ + + A + +++M G+ P+ T++SL++ C N G V+ A+ LFEEM
Sbjct: 416 NVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVN-GKVDVALKLFEEMK 474
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G EPN L+ + + + AF+L+
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLY 505
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + GD +++R ++ ++ + ++ +N +M+ + ++
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K G++ D+ +Y L+ C+ G +A +++ E+KH +G + +V Y+ ++
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKH---RGT-EPNVVAYTALIS 490
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML AG+TP+ +S+L+ +
Sbjct: 491 GLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGS 526
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D RV+ L+ M G+ ++TIL+D+ +G++ ++ M+ ++ DV YT
Sbjct: 182 DDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I R+ +++A +F+E I+PN TY L+ + G + + LA DM
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLA---DM 298
Query: 648 WKAGYKANDTYLKELIEEWC-EGVIQD 673
G N +I+ +C +G++ +
Sbjct: 299 QGRGVGHNQIIFNTMIDGYCRQGMVDN 325
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 173/380 (45%), Gaps = 25/380 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V +F + M+ G D+ ++ ++++ C AG
Sbjct: 231 EMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ ++K + K D TY T++ D+ Q ++V M++ G N
Sbjct: 291 RLSDAKAVFWKMKASDQKP----DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNI 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++++++A G V++A+ +F+EM + G P N L+ ++A FDRA LF
Sbjct: 347 VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
A G +G T + N K QS+ + H K P
Sbjct: 407 MN------ACGPSPNGYTHVLFINYYGKSGQSLKAIQRY---EHM----KSKGIVPDVAA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + E++ +G+SP+ I++T++I C + + A+ M
Sbjct: 454 ANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G PDV+A + I + + +A+ LF ++K +I+P TY TLL R G +
Sbjct: 514 ESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVK 573
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
EV Q L ++M + Y N
Sbjct: 574 EVMQLL---EEMTRTIYPPN 590
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 203/447 (45%), Gaps = 58/447 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A + N+ ++D G ++ A++++
Sbjct: 312 VTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + ++ Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y +H+++KG++ DV + ++ A + MA +V ++ + GV+P+TI
Sbjct: 432 SLKAIQRY---EHMKSKGIVP-DVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM+ F +M+++GC P+ N L+ + + + A++LF
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLF--- 544
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
HK K+ +PT TYN
Sbjct: 545 ------------------------HKLKE--------------------MKIEPTNGTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM PN I++ ++D +G V A+ +L M E
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEK 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G +PD+ +Y T + ++ +RL++AF +F +MK + P+ T T+L + + G + E
Sbjct: 621 GCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEA 679
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIE 664
+ Y + KAG + + L+E
Sbjct: 680 LHTVKEY--ILKAGCNVDKSSFHSLME 704
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 133/613 (21%), Positives = 262/613 (42%), Gaps = 97/613 (15%)
Query: 67 LSSRNDYYADMASKLAKDGRLEEFAMIVESVV--VSEGNVSKFASMLSLEMVASGIVKSI 124
+ N Y + S L ++G+++E ++E + + N+ + ++L
Sbjct: 552 IEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLS--------- 602
Query: 125 REGRIDCVVGVLKKLNELGVAP-LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
+ G ++C + +L + E G AP L ++ + L+K E RL ++ MF + ++L
Sbjct: 603 KNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEE--RLEEA--FRMFCQMKKILAP 658
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRY----ACIVPRADILFCNFVREFGKKRDLVS 239
+ + F V+ + K ++ Y C V ++ F + + KK +
Sbjct: 659 DYATLCTILPSF--VKNGLMKEALHTVKEYILKAGCNVDKSS--FHSLMEGILKKAGVEK 714
Query: 240 ALR-AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
++ A + + + + + ++C I +C +++ ++ + V+L +NSL+
Sbjct: 715 SIEFAENIASRGILLNDFFLCPLIRHLCK-HKKALEAHQLFNKFKGLGVSLKTGSYNSLI 773
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V+ + + +++ M++LG D +YN++L A G ++ +E+ K + K
Sbjct: 774 RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA---MGKSMRVEEMLKVQKEMHRK 830
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G V TY+TI+ +K + A+ + +++S G +P T+ L++ +G +
Sbjct: 831 GYESTYV-TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVD 889
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +LF EML+ GCEPN NILL G GNT
Sbjct: 890 AENLFNEMLEYGCEPNCTIYNILLN---------------------------GHRIAGNT 922
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-------- 528
+ + + K + N P +Y IL+ CT
Sbjct: 923 ENVCQLFEKMVEQGIN--------------------PDIKSYTILIDTLCTAGRLNDGLC 962
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y+R ++ +GL P+ I + +LID G S +E A+ + M++ G+ P++ Y +
Sbjct: 963 YFR------QLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNS 1016
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ + +A ++EE+ +P++ TY L+R S GS A Y M
Sbjct: 1017 LILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGS---TDNAYAAYGQMI 1073
Query: 649 KAGYKAN-DTYLK 660
G + N TY++
Sbjct: 1074 VGGCQPNSSTYMQ 1086
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 51/272 (18%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ L+ +TY+ ++ + + A++V + M+ G++P+ T+S L+ A V+ +
Sbjct: 167 MSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVL 226
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L EM G +PN I ++ +A +FD A+ + LG+ D
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHI------------LGKMEDSGC-- 272
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---KAL 535
KP T+ ++++ C D R+ KA+
Sbjct: 273 ---------------------------------KPDVVTHTVIIQVLC-DAGRLSDAKAV 298
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M+ P+ +++ L+D CG SG+ + +++ M DG + ++V+YT + +
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQ 358
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R+ +A ++F+EMK + P +Y +L+
Sbjct: 359 VGRVDEALAVFDEMKEKGMSPEQYSYNSLISG 390
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR G+S N ++ LI SG A+++ K M EDG+SP V Y+ + + +
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRD 221
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ L EM+ ++PN+ +Y +R + E L +D
Sbjct: 222 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMED 269
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ + G G + A L +MRE GMS + Y I V+S +A +++ M
Sbjct: 138 TFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAM 197
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I P++ TY L+ A +G +V L + +M G K N
Sbjct: 198 VEDGISPSVRTYSVLMVA---FGKKRDVDTVLWLLNEMEARGVKPN 240
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMSPDVVAY-----------------------------------TTAIKVCVRSKRLKQA 602
G+ P Y + I +R+ +A
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + M+ ++P+++TY TL++A R + + + +Y++M +G
Sbjct: 599 FSVLQFMRENGLRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 644
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 167/395 (42%), Gaps = 28/395 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DLR + + +F+ L++ A LE+ + Q +G+ + L+ A AG
Sbjct: 218 DLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ E G +K Y+ ++K + + A +V ++M GV P+
Sbjct: 278 RVAEAEALFLE---FFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDE 334
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S L++A AG E A L +EM G +P+S + +L + + +AF + R
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK--RFSFKPTT 515
S + DR H I + H +F+K +P
Sbjct: 395 MQASGVR----------PDR-----HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDV 439
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ A C + R L EMR P ++ I+I+ G + EG +L
Sbjct: 440 VTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+E G+ P+++ YTT + V RS R K+A E MK ++P+ Y L+ A ++ G
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V + M G + + L LI + E
Sbjct: 560 ---ADHALNVVKAMKADGLEVSILVLNSLINAFGE 591
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 42/259 (16%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A++ ++ P++ T+ID G + ++
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 278 IYEDLRS-----------------------------------QNVTLNIYVFNSLMNVNA 302
++E++R Q + NI + +L++V
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
++ ++ + M+ G+ Y+ L+ A G LA VK ++A G L+
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMKADG-LE 576
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ + ++++ F + + A V + M G+ P+ IT+++L+ A ++ +
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVI 636
Query: 421 FEEMLQAGCEPNSQCCNIL 439
+EEM+ +GC P+ + +L
Sbjct: 637 YEEMITSGCAPDRKARAML 655
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 177/386 (45%), Gaps = 32/386 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R + + V N+Y +N L+ + V +M+ G ++ +YN L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+ + G ++ +G ++ + T++T+V A + A K+ ++M
Sbjct: 198 AAFCRAGEVDAAERLVGVMR----EGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+TP+ +++++L++ AG + +A+ +F EM Q G P+ L+ A A +R
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 452 AFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A L R L + DG F+ ++ + + R
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRN----------------GFLDDALLAMKEMR 357
Query: 509 -FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P+ YN+L+ C + L++EM G+ P+ ++++ ++ G+ +
Sbjct: 358 ECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTD 417
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ + M + G+ PD + Y++ I+ +RL A LFE+M +QP+ TY TL+
Sbjct: 418 SAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ VQ+ L+++ +M K G
Sbjct: 478 DGHCKEGN---VQKALSLHDEMIKKG 500
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 188/447 (42%), Gaps = 60/447 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T++ G+ + + +R V ++ FN+++N A ++ +
Sbjct: 187 APNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARK 246
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + G+ D SYN L+ C AG A ++ E+ KGV+ DV T+++++
Sbjct: 247 MFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ---KGVVP-DVVTFTSLI 302
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + A+ + M G+ N T+++LI+ G ++ A+ +EM + +
Sbjct: 303 HAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQ 362
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ C N+L+ + + D A L I ME K +
Sbjct: 363 PSVVCYNVLINGYCKLGRMDEAREL-----------------------IHEMEAKGMKPD 399
Query: 491 TNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMN 537
T + + + + D +F+ P TY+ L++ C + A L
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M +GL P+ ++T LID GNV+ AL + M + G+ PDVV Y+ I +S
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTY---------------ITLLRARSRYGSLHEVQQCLA 642
R K+A L ++ + P+ + Y + LL+ S G +++ +
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK--- 576
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCEG 669
VYQ M +K + + LI C G
Sbjct: 577 VYQSMLDRHWKLDGSVYSVLIHGHCRG 603
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTILIDACGGSGNV 564
R P TYNIL++A C R +AL ++MR G +PN +++ L+ A +G V
Sbjct: 147 RDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A +++ +MRE G+ P +V + T + ++ R++ A +F+EM + P+ V+Y TL
Sbjct: 207 DAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ + G LHE LAV+ +M + G + LI C
Sbjct: 267 VSGYCKAGCLHEA---LAVFAEMAQKGVVPDVVTFTSLIHAMC 306
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 29/314 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF- 421
+ Y+ ++ +DA A ++ ML GV PN T++ L+ A G E+A+ +
Sbjct: 120 LLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVG 178
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDR 478
++M AGC PN N L+ A A + D A RL R + + V +G +
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC-K 237
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKA 534
ME K FD+ R P +YN L+ C + A
Sbjct: 238 AGRMEDARKM----------------FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM G+ P+ +++T LI A +GN+E A+ ++ MRE G+ + +T I
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+ L A +EM+ +IQP++V Y L+ + G + E ++ + +M G K
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE---LIHEMEAKGMKP 398
Query: 655 NDTYLKELIEEWCE 668
+ ++ +C+
Sbjct: 399 DVVTYSTILSGYCK 412
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 53/296 (17%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ + +++++ A ++A L A L ML+ G PN NIL++A Q + A
Sbjct: 115 GYAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ +G+D G
Sbjct: 174 LGV------------VGDDMRGA----------------------------------GCA 187
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ A C + + L+ MR G+ P+ +++ +++ +G +E A ++
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M +G++PD V+Y T + ++ L +A ++F EM + P++VT+ +L+ A R
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCR 685
G+L ++ +A+ M + G + N+ LI+ +C G + D E+ CR
Sbjct: 308 AGNL---ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 49/382 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N + F +L++ + L L
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M++ + + YN+L+ C G A+E+ + +EAKG +K DV TYSTI+
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL---IHEMEAKG-MKPDVVTYSTILS 408
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ ML GV P+ IT+SSLI + A LFE+MLQ G +P
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + +A L + + I D + +
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSL-------------------HDEMIKKGVLPDVVTYS 509
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
+ + S + +R FK P Y LM C T ++ +K
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKG 569
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LMN+ V S W ++LI GN+ AL K + G SP+ +
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ +A ++ +E+
Sbjct: 630 SLVRGLFEEGMTVEADNVIQEL 651
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP A I + + +R ++R L A ++ + P+ + T+ID G C G+
Sbjct: 431 VVPDA-ITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID--GHCKEGNVQ 487
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTL----EVYKNMQKLGVM 321
K+ ++++++ + V ++ ++ L++ A L F L V N++ +M
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Query: 322 -----ADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFA 374
A+ S LLK + G A ++Y + +H KLD YS ++
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW------KLDGSVYSVLIHGHC 601
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AL + +L G +PN+ + SL+ G+ +A ++ +E+L
Sbjct: 602 RGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL--------N 653
Query: 435 CCNI 438
CC++
Sbjct: 654 CCSL 657
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 178/403 (44%), Gaps = 37/403 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ S + NIY F + + A + + K M G D+ +Y +L+ A
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG A+E++ ++K K D TY T++ F+D + +M + G
Sbjct: 308 CNAGKLNNAKELFLKMKASSHKP----DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGY 363
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ LI+A G V++A + M + G PN N L+ + + D A
Sbjct: 364 LPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALE 423
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVP-NSHYSSF 505
LF S T + T + L DY G + ++ TN PN V N+ S
Sbjct: 424 LFNSMESLGLETTAYTYI-LFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
++ + K N ++ GL+P+ I++ IL+ G +G V+
Sbjct: 483 AEQGRLE------------------EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++L M E+G P+VV + I ++ R+ +A+ +F+ MK ++ P +VTY TLL
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G VQ+ A+++ M N L++ C+
Sbjct: 585 AGLGKEG---RVQEATALFKGMIADDCPPNTISFNTLLDCLCK 624
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 23/295 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ A+ +MA + M +AG TP+ T++ ++A +G +++ L+EEML
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
GC+PN+ NI++ V++ D+A L+ S S T G DG ++ +
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL-KLGRL 909
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMR 540
E KQ ++ P YNILM D L M
Sbjct: 910 EEA-KQFFEEMLDY-------------GCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ P+ S++I++D G V+ AL + ++ G+ PD+V Y I RS+R++
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+A SLF+EM++ I P+L TY L+ G + E + +Y+++ G + N
Sbjct: 1016 EALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK---MYEELQLKGLEPN 1067
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 241/578 (41%), Gaps = 81/578 (14%)
Query: 71 NDY-YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRI 129
N Y Y + L K G E A+ V +VSEG + +L MVA G + I
Sbjct: 191 NGYSYIGLIHLLLKSGFCRE-ALKVYRRMVSEGIKPSLKTYSAL-MVALG-----KRRDI 243
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD-SGEVEMFVGLMEVLEEFRLPV 188
+ V+G+L+++ LG+ P + F + C R+L +G+++ G+++ +++
Sbjct: 244 ETVMGLLQEMESLGLRP----NIYTFTI----CIRILGRAGKIDEAYGILKRMDDAGCGP 295
Query: 189 KELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRA 243
+ I LC N ++ L ++ + P + + + +F DL +
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDR-VTYITLLDKFSDHGDLDAIKEF 354
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
+ + P++ +ID G ++ + ++ Q V N++ +N+L+ +
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ L LE++ +M+ LG+ +Y + + +G + A + + ++K G++
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK---TNGIVP- 470
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
++ + + A+ + A + + G+ P+ IT++ L+ AG V+ A+ L
Sbjct: 471 NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + GC+P N L+ +A + D A+++F+
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM---------------------- 568
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNE 538
K PT TYN L+ + RV+ AL
Sbjct: 569 -------------------------KEMKLAPTVVTYNTLLAGLGKE-GRVQEATALFKG 602
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M PN IS+ L+D +G V+ AL++L M E PDV+ Y T I ++ R
Sbjct: 603 MIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENR 662
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ AF LF +MK I P+ VT TLL + G + +
Sbjct: 663 VNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIED 699
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 17/297 (5%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ ++Y ++ + + + + ALKV M+S G+ P+ T+S+L+ A +E M L
Sbjct: 190 LNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGL 249
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+EM G PN I ++ A + D A+ + + G D T I
Sbjct: 250 LQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM----DDAGCGPDVVTYTVLID 305
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNE 538
+ + K + N S S KP TY L+ D +K +E
Sbjct: 306 ALCNAGK--LNNAKELFLKMKAS------SHKPDRVTYITLLDKFSDHGDLDAIKEFWSE 357
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ +++TILIDA G V+ A L +M++ G++P++ Y T I +R R
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L +A LF M+ ++ TYI + YG E + + ++ M G N
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFI---DYYGKSGESGKAIKTFEKMKTNGIVPN 471
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 22/347 (6%)
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S +T ++ +NSL++ + A + ++ M+ G D+ +YN+ L A +G
Sbjct: 780 KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKI 839
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E++ + + +G K + T++ ++ + A+ + D++S +P T
Sbjct: 840 ---KELFDLYEEMLFRGC-KPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWT 895
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ LI+ G +E+A FEEML GC PN NIL+ + + A LFR
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ L + Y D + + D HY K P YN+
Sbjct: 956 KEGIRPDL-KSYSIMVDCLCMVGKVDDAL-----------HYFEELKLSGLDPDLVCYNL 1003
Query: 521 LMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ RV+ +L +EMR G++P+ ++ LI G +G VE A ++ + ++
Sbjct: 1004 MINGLGRSQ-RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
G+ P+V Y I+ S +A++++++M +PN T+ L
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP+ TY+ LM A D V L+ EM ++GL PN ++TI I G +G ++ A
Sbjct: 222 GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEA 281
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
ILK M + G PDVV YT I + +L A LF +MK +P+ VTYITLL
Sbjct: 282 YGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDK 341
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S +G L +++ + +M GY + LI+ C+
Sbjct: 342 FSDHGDLDAIKE---FWSEMEADGYLPDVVTFTILIDALCK 379
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
SP + +ID G +++ +E++ N ++N LMN D++ E
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G+ D+ SY+I++ C+ G A + E+K L D+ Y+ ++
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL----SGLDPDLVCYNLMI 1005
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ + AL + ++M + G+TP+ T+++LI AG+VE+A ++EE+ G E
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
PN N L++ + DRA+ +++
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYK 1092
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +MR VG N S+ LI SG AL++ + M +G+ P + Y+ + +
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ ++ L +EM+ ++PN+ T+ +R R G + E + + M AG +
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAY---GILKRMDDAGCGPD 296
Query: 656 DTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL----LLEKVAVH 703
LI+ C K N E+ L + +S +P + LL+K + H
Sbjct: 297 VVTYTVLIDALCNA---GKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDH 345
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 193/445 (43%), Gaps = 59/445 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + + + AL+ + K+ P + I++V G G + K A+ +D+
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 283 RSQNVTLNIYVFNSLMNV-NAHDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + ++ +N+L++ A L + L++++ ++ G D +YN LL + G +
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLD---VYGKS 298
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E +K +E+ + V TY+++V + + AL +K M+ G+ P+ T
Sbjct: 299 RRPKEAMEVLKQMESNS-FRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYT 357
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ NAG E AM +FEEM + GC+PN N L++ + +F+ ++F+
Sbjct: 358 YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K P T+N
Sbjct: 418 VCKCS-----------------------------------------------PDIVTWNT 430
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ +P ++ LI A G G+ + A+ K M E G
Sbjct: 431 LLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+SPD+ Y + R +Q+ + EMK +PN VTY +LL A Y + EV+
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHA---YANGREVE 547
Query: 639 QCLAVYQDMWKAGYKANDTYLKELI 663
+ A+ ++++ K + LK L+
Sbjct: 548 RMNALAEEIYSGTIKTHAVLLKTLV 572
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 205/458 (44%), Gaps = 34/458 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++Y T++ G + ++E++R NI FN+L+ + KF ++V
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKV 412
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K ++ D+ ++N LL + G + E+ G + ++ + + T++T++
Sbjct: 413 FKEIKVCKCSPDIVTWNTLL---AVFGQNGMDSEVSGVFEEMK-RSRFAPERDTFNTLIS 468
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+ + ML AGV+P+ T+++++ A GL EQ+ + EM GC+P
Sbjct: 469 AYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N + LL A + +R AL E+ T + + K +
Sbjct: 529 NEVTYSSLLHAYANGREVER-------------MNALAEEIYSGTIKTHAVLLKTLVLVN 575
Query: 492 NTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + + + + F KR P TT N ++ KA ++N M GL+ +
Sbjct: 576 SKVDLLVETERAFLEFRKR-GISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLS 634
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ L+ + N + QI + + + G+ PDV++Y I R+ + +A + E
Sbjct: 635 LTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIE 694
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EMK P++VTY T + A Y + + + V + M K G K N +++ +C
Sbjct: 695 EMKVPAPVPDVVTYNTFIAA---YAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYC 751
Query: 668 EGVIQDKN----QNQGEVTLCRRTNSQRPQSLLLEKVA 701
+ ++D+ QN G++ S+ +S LLE++A
Sbjct: 752 KLKLRDEACSFVQNLGDLD---PQISEDEKSRLLERIA 786
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 36/331 (10%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ +LEA G ++DV+ Y++++ +A+ K ++ ALKV M G P IT+++++N
Sbjct: 167 LHNLEADG-FEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYG 225
Query: 410 NAGLV-EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK----- 463
G+ + + L ++M G P+ N L+ C ++ A LF ++
Sbjct: 226 KMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDA 285
Query: 464 -TQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVP-NSHYSSF-------------- 505
T AL + Y G + R KQ +N+ P+ V NS S++
Sbjct: 286 VTYNALLDVY-GKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKR 344
Query: 506 ---DKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
DK KP TY L+ A+ EMR VG PN ++ LI G
Sbjct: 345 KMVDK--GIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGD 402
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G E +++ K ++ SPD+V + T + V ++ + +FEEMK + P T
Sbjct: 403 RGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDT 462
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ TL+ A R GS Q +A Y+ M +AG
Sbjct: 463 FNTLISAYGRCGSF---DQAMAAYKRMLEAG 490
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
LV RA+ +K SP++ ++ + G K+ I + +TL++ +NS
Sbjct: 581 LVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNS 640
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
LM + + F + ++++ + G+ D+ SYNI++ A C A+ I E+K
Sbjct: 641 LMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPA 700
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
DV TY+T + +A + A+ V M+ G PN T++S+++ L
Sbjct: 701 PVP----DVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLR 756
Query: 415 EQA 417
++A
Sbjct: 757 DEA 759
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++ G +G V A +L + DG DV YT+ I +K+ + A +F +MK
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L+TY +L + G + +A+ QDM
Sbjct: 209 GCEPTLITYNAILNVYGKMG--MPWAKIIALVQDM 241
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 163/359 (45%), Gaps = 36/359 (10%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV+ +Y +++ C AG A E+ E+ GV +F Y+ I+ A
Sbjct: 49 GVVYGETTYKLVVDGLCGAGMANQALELVRELS-----GVYTPTLFIYNGIITGLCRASR 103
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A KV E M+ + PN T++ L+N + + A +F+EM + GC+PN
Sbjct: 104 VMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGT 163
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH-----KDKQSI 490
L+Q A + D A R+ RS L T V G + S ++ ++ + +
Sbjct: 164 LIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 491 TNTPNFVPNSH-------YSSFDKRFSF----------KPTTTTYNILMKACCTDYY--R 531
PN V S+ + D+ F Y + A C Y R
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDR 282
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + E+R G+ P+ +++++LI+ +G + +L++L+ MR +G+ PDVV Y+T I
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V + ++ + AF L E M+ PN+VTY +++ + G + EV + VY+ M K+
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR---VYEMMLKS 398
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 265 VCGICGDYMKSRAIYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---G 319
V G+CG M ++A+ E +R S T ++++N ++ + ++ YK ++K+
Sbjct: 61 VDGLCGAGMANQAL-ELVRELSGVYTPTLFIYNGIITGLCRASR-VMDAYKVLEKMVEES 118
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ ++ +Y ILL C + T LA+E++ E+K + K + TY T+++ + A
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMK----RNGCKPNPITYGTLIQHLSRAGEI 174
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL+V + S + + IT ++++ A ++ A+ EEM Q G PN + L
Sbjct: 175 DEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITN----- 492
+ + + DR R F K Y G D + + D+ +S+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 493 -TPNFVPNS-------HYSSFD---------KRFSFKPTTTTYNILMKACCT-----DYY 530
P+ V S FD +R KP TY+ L+ C D +
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ M G PN +++ ++D SG ++ ++ ++M + SPDVV Y+ +
Sbjct: 355 R---LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIM 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ L A LFE +K + P+ Y ++ + R G L E
Sbjct: 412 NGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEE 457
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 171/397 (43%), Gaps = 54/397 (13%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P ++I II G+C M + + E + +++ N++ + L+N ++ K
Sbjct: 85 TPTLFIYNGII--TGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLA 142
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV++ M++ G + +Y L++ AG A + E + LE L DV T +T
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE----LPTDVITCTT 198
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE----- 423
IV A ALK E+M GV PN +T+S+L++ G +++ + FEE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 424 --MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALG 469
L+A P L A +A DRA + ++++ A
Sbjct: 259 GGSLEAAAYPG------YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF---------KPTTTTY 518
+D + + + +M + T + + N F F P TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 519 NILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
N +M C + +RV +M + R SP+ ++++I+++ +G ++ A+++ ++
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRC---SPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ PD AY+ I R+ +L++A ++ M+
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSP-NMYICRTIIDVCGICGDYMKSRAI-- 278
I + ++ + ++ ALR ++ L P ++ C TI+ G+C A+
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVM-IEQRSLELPTDVITCTTIVG--GLCKASRLDDALKF 215
Query: 279 YEDLRSQNVTLNIYVFNSLMN-VNAH-DLKFTLEVYKNMQ-KLGVMADMASYNILLKACC 335
E++R V N +++L++ H +L + ++ + + G + A+Y L A C
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A++ V+ L GV+ DV TYS ++ FA A + +L++ EDM GV
Sbjct: 276 KAGYLDRARK---SVEELRQSGVVP-DVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+S+LIN + A L E M AG PN N ++ ++ + D R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391
Query: 456 F 456
+
Sbjct: 392 Y 392
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASK-KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
++ + N V F + +L +R ++ K + S +D G ++R
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+LR V ++ ++ L+N A +F +LE+ ++M++ GV D+ +Y+ L+ C
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
Q+ + ++ +EA G +V TY++++ + +V E ML + +P+
Sbjct: 348 RKF---QDAFRLLELMEAAGSPP-NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+S ++N + AG+++ A+ LFE + + P++ ++++ + A + + A ++
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463
Query: 458 SWTLS 462
++
Sbjct: 464 GMEVT 468
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 181/406 (44%), Gaps = 31/406 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C GD R + +++ ++ V N+ +N+ + DL E+ M+K GV
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 293
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y +L+ G AQ ++ E++ KG+ + DV+ Y++I+ + + A
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE---KGI-EADVYVYTSIISCNCRSGNVKRA 349
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + ++M G+ P+ T+ +LI+ AG +E A L EM G + N N L+
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPN 499
E+ D A RL + + L D Y+ + + KD+
Sbjct: 410 YCESGMVDEALRL----QVVMEKKGLESDVFAYNSIASGLCKLNRKDE---------AKG 456
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S ++ S P T ++ L+ C + + K + EM G PN I++ +LID
Sbjct: 457 LLFSMVERGVS--PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++ A ++ + G+ PDV T+ I ++ A LF+EM + PN
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+VTY ++ S+ G ++ +Y +M + G +DT L+
Sbjct: 575 VVTYTAMISGLSKDG---RSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 23/276 (8%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWT 460
L A+ + +A+ FE M + G + + C + L A Q D R FR +
Sbjct: 161 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 220
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T +L DG R ++E K V K TYN
Sbjct: 221 VEVTVYSLTIVLDGLCKR-GDVEMGRKLMDEVAAKGV--------------KANVVTYNA 265
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ D V ++ M G++ N +++T+LI G +E A ++ + MRE G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ DV YT+ I RS +K+A LF+EM + P+ TY L+ + G + Q
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ +M G N LI+ +CE + D+
Sbjct: 386 MLV---NEMQGKGIDLNPVIFNTLIDGYCESGMVDE 418
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
SPN T+ID+ G++++++ ++ ++ + NI +N L++ AH
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK LE G++ D+ + L+ C+ G +A +++ E+ +G++ +V
Sbjct: 527 LKDELE------NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ---RGLVP-NVV 576
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
TY+ ++ + + A K+ ++M G+TP+ +SSL+ + +A
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMSPDVVAY-----------------------------------TTAIKVCVRSKRLKQA 602
G+ P Y + I +R+ +A
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + M+ ++P+++TY TL++A R + + + +Y++M +G
Sbjct: 599 FSVLQFMRENGLRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 644
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 167/395 (42%), Gaps = 28/395 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DLR + + +F+ L++ A LE+ + Q +G+ + L+ A AG
Sbjct: 218 DLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ E G +K Y+ ++K + + A +V ++M GV P+
Sbjct: 278 RVAEAEALFLE---FFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDE 334
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S L++A AG E A L +EM G +P+S + +L + + +AF + R
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK--RFSFKPTT 515
S + DR H I + H +F+K +P
Sbjct: 395 MQASGVR----------PDR-----HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDV 439
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ A C + R L EMR P ++ I+I+ G + EG +L
Sbjct: 440 VTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+E G+ P+++ YTT + V RS R K+A E MK ++P+ Y L+ A ++ G
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V + M G + + L LI + E
Sbjct: 560 ---ADHALNVVKAMKADGLEVSILVLNSLINAFGE 591
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 42/259 (16%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A++ ++ P++ T+ID G + ++
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 278 IYEDLRS-----------------------------------QNVTLNIYVFNSLMNVNA 302
++E++R Q + NI + +L++V
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
++ ++ + M+ G+ Y+ L+ A G LA VK ++A G L+
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMKADG-LE 576
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ + ++++ F + + A V + M G+ P+ IT+++L+ A ++ +
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVI 636
Query: 421 FEEMLQAGCEPNSQCCNIL 439
+EEM+ +GC P+ + +L
Sbjct: 637 YEEMITSGCAPDRKARAML 655
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 181/406 (44%), Gaps = 31/406 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C GD R + +++ ++ V N+ +N+ + DL E+ M+K GV
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 297
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y +L+ G AQ ++ E++ KG+ + DV+ Y++I+ + + A
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE---KGI-EADVYVYTSIISCNCRSGNVKRA 353
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + ++M G+ P+ T+ +LI+ AG +E A L EM G + N N L+
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPN 499
E+ D A RL + + L D Y+ + + KD+
Sbjct: 414 YCESGMVDEALRL----QVVMEKKGLESDVFAYNSIASGLCKLNRKDE---------AKG 460
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S ++ S P T ++ L+ C + + K + EM G PN I++ +LID
Sbjct: 461 LLFSMVERGVS--PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++ A ++ + G+ PDV T+ I ++ A LF+EM + PN
Sbjct: 519 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+VTY ++ S+ G ++ +Y +M + G +DT L+
Sbjct: 579 VVTYTAMISGLSKDG---RSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 23/276 (8%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWT 460
L A+ + +A+ FE M + G + + C + L A Q D R FR +
Sbjct: 165 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 224
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T +L DG R ++E K V K TYN
Sbjct: 225 VEVTVYSLTIVLDGLCKR-GDVEMGRKLMDEVAAKGV--------------KANVVTYNA 269
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ D V ++ M G++ N +++T+LI G +E A ++ + MRE G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ DV YT+ I RS +K+A LF+EM + P+ TY L+ + G + Q
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ +M G N LI+ +CE + D+
Sbjct: 390 MLV---NEMQGKGIDLNPVIFNTLIDGYCESGMVDE 422
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
SPN T+ID+ G++++++ ++ ++ + NI +N L++ AH
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK LE G++ D+ + L+ C+ G +A +++ E+ +G++ +V
Sbjct: 531 LKDELE------NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ---RGLVP-NVV 580
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
TY+ ++ + + A K+ ++M G+TP+ +SSL+ + +A
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 181/415 (43%), Gaps = 59/415 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + + ++ A R DA + P+ Y ++I G+C G ++ +++ +
Sbjct: 291 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDKMVEI 348
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N +N+L++ N DL+ M K G+M +++YN+L+ A + G A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +T++S
Sbjct: 409 DDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM---- 520
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
D++S+ P T+N LM+
Sbjct: 521 ----------------------DRKSVP---------------------PDEVTFNTLMQ 537
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + + L++EM+ G+ P+HIS+ LI G G+++ A ++ M G +P
Sbjct: 538 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 598 TLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 51/419 (12%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + I + + N L+++ + +N ++ + L Y M +L + + + ++N
Sbjct: 201 CFYMMKEKGIVPKIETCNDMLSLF-----LKLNRMEMAWVL--YAEMFRLRISSTVYTFN 253
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A+E G +E G K +V +Y+TI+ ++ + A ++ +
Sbjct: 254 IMVNVLCKEGKLKKAREFIG---FMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDA 309
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P++ T+ SLI+ G +E+A LF++M++ G PN+ N L+
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNM--EHKDKQSITNTPNFV 497
+RAF +R + K + Y +G +M E + K I
Sbjct: 370 LERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII------- 421
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
P TYNIL+ C + + L NEM + G+ P H+++T LI
Sbjct: 422 ---------------PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
++ A + + + + G+SPDV+ + + + +++AF L +EM +
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
P+ VT+ TL++ R R G + E + L +M + G K + LI + G I+D
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLL---DEMKRRGIKPDHISYNTLISGYGRRGDIKD 582
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLE-----LFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY---CNKGDLERAFSYRDEMVKKGIMP 387
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 388 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 436
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A +A+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ V+ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 497 FNAM--VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A +V+++MLS G P +T+++LI
Sbjct: 555 MKR---RGI-KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPD 633
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 31/302 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ A A W+ A+ + +DML A + P+ T++++INAC AG ++A+
Sbjct: 187 KPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYF--------EMMKGANIAPDTFTL 298
Query: 480 SNMEH---KDKQ-----SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDY 529
+ + H KD Q + N S +KR P TY +M + C
Sbjct: 299 NIVIHCLVKDGQYGEAIELLN----------SMREKRTQCPPDVVTYTSIMHSYYVCGKV 348
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA+ + M G+ PN +S+ L+ A G AL I K+++++G+ PDVV+YTT
Sbjct: 349 EDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTL 408
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ RS + ++A F+EM+ +PN+V+Y L+ A YGS ++ +++ +M K
Sbjct: 409 LNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDA---YGSAGMFKEAISLLHEMEK 465
Query: 650 AG 651
G
Sbjct: 466 DG 467
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 169/411 (41%), Gaps = 60/411 (14%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
++G+ +L++++R K+ P++ +I+ +CG +A+++ + ++ V
Sbjct: 310 QYGEAIELLNSMR----EKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKP 365
Query: 290 NIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI +N+L+ A L ++K +++ G+ D+ SY LL A +G A+E +
Sbjct: 366 NIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAF 425
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E++ K + ++ +Y+ ++ + A ++ A+ + +M G+ P+ ++ S+L+ A
Sbjct: 426 KEMR----KNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA 481
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C + + + E G + N C N + + + + +A L+ S
Sbjct: 482 CGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVN-- 539
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
P TYNIL+ C
Sbjct: 540 ---------------------------------------------PDAVTYNILISGLCK 554
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y +M + + ++ LI + G + A M+E G PDV+
Sbjct: 555 VGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLT 614
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
YT I+ + A+ LF+EM+ +QP+ + +L+ A +R GS HE
Sbjct: 615 YTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNR-GSQHE 664
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 172/434 (39%), Gaps = 57/434 (13%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P ADI + + + + A+ D + P+ +I+ CG G++ K+
Sbjct: 188 PDADI-YNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + + V ++ N +++ N + ++ M+ + D + NI++
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLV 306
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ ++ E + DV TY++I+ + + V + M++ GV
Sbjct: 307 KDGQYGEAIELLNSMR--EKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVK 364
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +++++L+ A A+ G+ A+ +F+ + Q G P+ LL A + Q ++A
Sbjct: 365 PNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREA 424
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ ++ S +P
Sbjct: 425 FKEM-----------------------------------------------RKNSCRPNI 437
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+YN L+ A + + +L++EM G+ P+ +S + L+ ACG + IL+
Sbjct: 438 VSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEA 497
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ ++V Y + I + +A L+ M + P+ VTY L+ + G
Sbjct: 498 AKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGK 557
Query: 634 LHEVQQCLAVYQDM 647
E L ++DM
Sbjct: 558 YAE---SLKFFEDM 568
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 145/380 (38%), Gaps = 80/380 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K I E +S+ + LNI +NS + +N D LE+
Sbjct: 470 PDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALEL 529
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV---------------LAQEIYGEV------ 350
Y M V D +YNIL+ C G L +E+Y +
Sbjct: 530 YAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 589
Query: 351 --KHLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K EA+ DV TY+ +++ + D W+ A + ++M V P+ I
Sbjct: 590 QGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAII 649
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEP-NSQCCNILLQACVEACQFDRAFRLFRSW 459
SSL+ A E+ + L E+++ C P N + ++ +C + R W
Sbjct: 650 CSSLMEALNRGSQHERVLQLM-ELMKEKCIPLNQKAYFEIIASC----------SMLRDW 698
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KT + E D + IS + + +F
Sbjct: 699 ---KTASEIIEHLDSSLSSIS---------------------VGTLNHLLTFLGKCGKTE 734
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+MK +Y+ +M+ TVG+S ++T+L+ G +++L+ M + G+
Sbjct: 735 CMMKL----FYK---MMSSCSTVGVS----TYTVLLRNLLAVGKWRKYIEVLQWMEDAGV 783
Query: 580 SPDVVAYTTAIKVCVRSKRL 599
SP + Y + R +
Sbjct: 784 SPTLYMYQNVLPYIWRDNSM 803
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 175/413 (42%), Gaps = 31/413 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL + K++ P++ T+++ G G K+R ++++R + NI +N+L++
Sbjct: 386 ALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALID 445
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+A K + + M+K G+ D+ S + LL AC G +I ++ +++G
Sbjct: 446 AYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTAC---GRCRQITKIDTILEAAKSRG 502
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ KL++ Y++ + + + + AL++ M+++ V P+ +T++ LI+ G ++
Sbjct: 503 I-KLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAES 561
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGED 471
+ FE+M+ + + L+ + V+ + A F S S T A+ E
Sbjct: 562 LKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEA 621
Query: 472 Y-DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
Y D + R + K+ + T P+ + S R S LMK C
Sbjct: 622 YNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLN 681
Query: 529 ---YYRVKA---LMNEMRTVGLSPNHISWTI----------LIDACGGSGNVEGALQILK 572
Y+ + A ++ + +T H+ ++ L+ G G E +++
Sbjct: 682 QKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFY 741
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M + V YT ++ + + ++ + + M+ + P L Y +L
Sbjct: 742 KMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L EM+ P+ + LI A +G A+ I+ M + P Y I
Sbjct: 173 QARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVI 232
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
C + K+A L ++M + P+LVT+ +L A + + + + +A Y +M K
Sbjct: 233 NACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSA---FKNGSQYSKAIA-YFEMMKG 288
Query: 651 GYKANDTYLKELI 663
A DT+ ++
Sbjct: 289 ANIAPDTFTLNIV 301
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 198/419 (47%), Gaps = 24/419 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ T++ G + I+ ++R+ NI FN+L+ ++ + +F ++V
Sbjct: 391 PDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKV 450
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ ++ D+ ++N LL + G + E+ G K ++ G + + T++T++
Sbjct: 451 FEEIEICNCAPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLIS 506
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ +Q A+ V + ML AGVTP+ ++++++ A A GL EQ+ +F EM C+P
Sbjct: 507 AYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKP 566
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N LL A + + +R L E Y G T+ + + K +
Sbjct: 567 NELTYCSLLHAYANSKEIERMHTLAE------------EIYSGLTEPVPVL-LKTLVLVN 613
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+ + + + ++ + + P +T N ++ KA ++N M G SP+
Sbjct: 614 SKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLA 673
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ L+ S N E + ++LK + G+ PD+++Y T I R+ R+K A +F M
Sbjct: 674 TYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYM 733
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
K Y + P+++TY T + + Y + + + V + M K G K N +++ +C+
Sbjct: 734 KTYGLVPDVITYNTFV---ASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCK 789
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 189/438 (43%), Gaps = 64/438 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLN 290
G+ RD A+ + ++ P + I++V G G + K + ++S V +
Sbjct: 231 GRYRD---AVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPD 287
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
Y +N+L++ + +V++ M+ G D ++N LL + G + +E
Sbjct: 288 DYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLD---VYGKSRRPKEAME 344
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +E G + TY++++ +A + A+++K+ M+ G+ P+ T+++L++
Sbjct: 345 VLKEMEFSG-FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGF 403
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG+ E AM +F EM AGC+PN C F+ ++
Sbjct: 404 EKAGMDEPAMRIFGEMRAAGCKPN-------------ICTFNALIKM------------- 437
Query: 469 GEDYDGNTDRISN-MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
GN R + M+ ++ I N P T+N L+
Sbjct: 438 ----HGNRGRFAEMMKVFEEIEICNC------------------APDIVTWNTLLAVFGQ 475
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ V + EM+ G P ++ LI A G+ + A+ + K M E G++PD+ +
Sbjct: 476 NGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y + R +Q+ +F EMK + +PN +TY +LL A Y + E+++ + +
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA---YANSKEIERMHTLAE 592
Query: 646 DMWKAGYKANDTYLKELI 663
+++ + LK L+
Sbjct: 593 EIYSGLTEPVPVLLKTLV 610
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 28/319 (8%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K LDV+ Y++++ +A ++ A+ V + M G P IT++ ++N G+
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 416 QAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS-----KTQVALG 469
+ L M +G P+ N L+ C ++ A ++F LS K
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTL 329
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D G + R K+ + F F P+ TYN L+ A D
Sbjct: 330 LDVYGKSRR-----PKEAMEVLKEMEFS------------GFSPSIVTYNSLISAYARDG 372
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A L ++M G+ P+ ++T L+ +G E A++I MR G P++ +
Sbjct: 373 LLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFN 432
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IK+ R + +FEE++ P++VT+ TLL + G EV V+++M
Sbjct: 433 ALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVS---GVFKEM 489
Query: 648 WKAGYKANDTYLKELIEEW 666
+AG+ LI +
Sbjct: 490 KRAGFVPERDTFNTLISAY 508
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G G V A IL +R+DG DV AYT+ I + R + A +F++M+
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246
Query: 613 QIQPNLVTYITLLRARSRYG 632
+P L+TY +L + G
Sbjct: 247 GCKPTLITYNVILNVYGKMG 266
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 173/404 (42%), Gaps = 45/404 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E + ++ ++Y +++L+ + +V M++ G + +YN+L+ C
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G +E +G K +E G++ D FTY ++ ++ A + ++M A +
Sbjct: 291 RSGAV---EEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +++LI+ G ++A + +EM+ AG +PN + L++ + Q DRA L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
+ M + T T N + H+ K+ +F+
Sbjct: 407 LK-----------------------QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY+I++ C KA L+ EM T GL PN + LI G
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV A +I M + + PD+ Y + I + R++++ F +M+ + PN TY
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 563
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
L+ + G L +Q + Q M G K ND +L+E +
Sbjct: 564 GLIHGYLKNGDLESAEQ---LVQRMLDTGLKPNDVIYIDLLESY 604
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 127/593 (21%), Positives = 246/593 (41%), Gaps = 106/593 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS----------------SPNMYICRTIIDVCG 267
VR+ + D ++ + +H S SPN+Y +I G
Sbjct: 407 LKQMVRD-SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH--G 463
Query: 268 IC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMAD 323
+C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D
Sbjct: 464 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ YN L+ G + + + + ++ +G+L + FTYS ++ + + A
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAE 579
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 580 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 639
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + AFR+ G + +G+ VP+ H
Sbjct: 640 SSSGNMEAAFRVLS-----------GIEKNGS---------------------VPDVH-- 665
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
Y+ L+ C R KA +++EM G+ PN + + LID S
Sbjct: 666 -------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 712
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 713 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
L S G L +Q + + ++M+ G+ A+ + L++ +C+ G +Q+
Sbjct: 773 SVLTTGCSSAGDL---EQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQE 821
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 52/267 (19%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ +G V+ A + M G P+ +CCN LL+ + RA + W + +
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL------RADAMALLWKVRE 233
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V G P TY+ L++
Sbjct: 234 FMVGAG-----------------------------------------ISPDVYTYSTLIE 252
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A C ++ K ++ EMR G N +++ +LI SG VE A K M + G+ P
Sbjct: 253 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 312
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D Y I +S+R +A +L +EM +++PN+V Y L+ R G+ E
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA---F 369
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++M AG + N L+ C+
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCK 396
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 190/469 (40%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I GI G ++ A++ E
Sbjct: 235 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEF 294
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK V M + GV D A+Y++L+ A AG
Sbjct: 295 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGR 354
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 355 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRH 410
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM +F M G EP+ N L+ A + + D A LF+
Sbjct: 411 FYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEM 470
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
S N P P TTTYN
Sbjct: 471 RES-----------------------------NCP------------------PGTTTYN 483
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + V+ +M+EM+ GL PN I++T L+D G SG
Sbjct: 484 IMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 543
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 544 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEA 603
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK +P+++TY TL++A R + + + +Y++M +G
Sbjct: 604 FSVLQFMKENDFRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 649
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 159/403 (39%), Gaps = 61/403 (15%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DLR + + +F+ L++ A LE+ + Q +G+ + L+ A +AG
Sbjct: 223 DLRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAG 282
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ E G +K Y+ ++K + + A V ++M GV P+
Sbjct: 283 RVPEAEALFLE---FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDE 339
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S L++A AG E A L +EM G +P+S + +L + + +AF + R
Sbjct: 340 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 399
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S Q P+ H+ Y
Sbjct: 400 MHASGVQ--------------------------------PDRHF---------------Y 412
Query: 519 NILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
N+++ K C + + N MR G+ P+ ++W LIDA G + A+++ K M
Sbjct: 413 NVMIDTFGKYNCLGH--AMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEM 470
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
RE P Y I + +R ++ EMK + PN++TY TL+ R G
Sbjct: 471 RESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRY 530
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
E C+ + M G K + T L+ + + + D N
Sbjct: 531 KEAIDCI---EAMKADGLKPSPTMYHALVNAYAQRGLADHALN 570
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P +I++ G ++ + +++ Q + NI + +L++V ++ ++
Sbjct: 477 PGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 536
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G+ Y+ L+ A G LA VK + A G L+ ++++
Sbjct: 537 IEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMRADG-LEASTVVLNSLIN 592
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + A V + M P+ IT+++L+ A ++ ++EEM+ +GC P
Sbjct: 593 AFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 652
Query: 432 NSQCCNILLQA 442
+ + +L A
Sbjct: 653 DRKARAMLRSA 663
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 106/298 (35%), Gaps = 87/298 (29%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
D+ + + P+ +S LI+A A A L + A+ L G P S L+ A A
Sbjct: 223 DLRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAG 282
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A LF + L+ GE
Sbjct: 283 RVPEAEALFLEFFLA------GE------------------------------------- 299
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP T YN L+K Y ++ G+++ A
Sbjct: 300 ---IKPRTRAYNALLKG----YVKI-----------------------------GSLKNA 323
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+L M E G++PD Y+ + R+ R + A L +EM+ ++P+ + +L
Sbjct: 324 EHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAG 383
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW----CEGVIQDK-NQNQGE 680
G + Q+ AV ++M +G + + + +I+ + C G D N+ +GE
Sbjct: 384 FRDRG---DWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGE 438
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 209/482 (43%), Gaps = 69/482 (14%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+I+ N+ + EF K ++S + +K P++ ++D GD + A+
Sbjct: 160 NIMVHNYCKALEFDKVDAVISEM------EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S+ + I +NS++ + EV+K M GV D+ S+ IL+ C
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A +IY E++H +G+ K D+ ++S ++ +FA A+ +M G+ P
Sbjct: 274 VGEIEEALKIYKEMRH---RGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-------------- 442
+ + ++ +I AGL+ A+ + +EM+ GC P+ N LL
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 443 ----------------------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
C+E + D+A +LF + + + + Y+ D +
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEG-KLDKALQLFDTMLNQRLRPDI-VTYNTLIDGMC 447
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
DK N + R F P TY+IL+ + C A ++E
Sbjct: 448 RQGDLDKA----------NDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLDE 496
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ PN +++ +I SGNV + L+ M + +SPD++ Y T I ++ +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-T 657
+ AF L M+ ++QP++VTY L+ S +G+ VQ+ +++ M G + + T
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN---VQEAGWIFEKMCAKGIEPDRYT 613
Query: 658 YL 659
Y+
Sbjct: 614 YM 615
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 172/405 (42%), Gaps = 29/405 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +KG LK + TY++++K + W A +V ++M GV P
Sbjct: 204 AGDAEAAMAL---VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI G +E+A+ +++EM G +P+ + L+ + D A
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R R + L V G + + + V + P
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFC----------RAGLMSDALRVRDEMVGC-----GCLP 364
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEMR G+ P+ ++T LI G ++ ALQ+
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
G +V+ +M G N +I+ +C K Q
Sbjct: 485 G---QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 18/247 (7%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + L AL+ +D P++ T+ID G+C GD K
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID--GMCRQGDLDK 454
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNIL 330
+ +++D+ S+ + N ++ L +++H K +E M G++ ++ +YN +
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSIL--IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKED 388
+K C +GN Q K L+ V K+ D+ TY+T++ + A K+
Sbjct: 513 IKGYCRSGNVSKGQ------KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V P+ +T++ LIN + G V++A +FE+M G EP+ ++ V A
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626
Query: 449 FDRAFRL 455
AF+L
Sbjct: 627 SKEAFQL 633
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/472 (19%), Positives = 192/472 (40%), Gaps = 78/472 (16%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R G D V K++++ GVAP D F +L R+ GE+E +++ +E
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAP----DVRSFTILIGGFCRV---GEIEE---ALKIYKEM 287
Query: 185 R-LPVKELDEEFR-IVQLCVNKPDVNLAIRY----AC--IVPRADILFCNFVREFGKKRD 236
R +K F ++ L + ++ A+ Y C +VP +++ + F +
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCRAGL 346
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVF 294
+ ALR D P++ T+++ G+C + + + + ++R + V ++ F
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLN--GLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ + K L+++ M + D+ +YN L+ C G+ A +++ ++
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
E + + TYS ++ + + A ++M++ G+ PN +T++S+I +G
Sbjct: 465 RE----IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V + ++M+ P+ N L+ ++ + AF+L
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL---------------- 564
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYY 530
NM K+K +P TYN+L+ +
Sbjct: 565 --------NMMEKEK-----------------------VQPDVVTYNMLINGFSVHGNVQ 593
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ +M G+ P+ ++ +I+ +GN + A Q+ M + G +PD
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 503 SSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
S +KR F P T+N+++ A D AL++ M + GL P +++ ++
Sbjct: 180 SEMEKRCVF-PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR 238
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
SG + A ++ K M + G++PDV ++T I R +++A +++EM+H I+P+LV+
Sbjct: 239 SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS 298
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQG 679
+ L+ +R G + +A ++M G + +I +C G++ D + +
Sbjct: 299 FSCLIGLFARRGKM---DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRD 355
Query: 680 EVTLC 684
E+ C
Sbjct: 356 EMVGC 360
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 291 IYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + KF + +Y NM+K G++ ++ +YNILLKA C A +++
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 349 EVKH--------------------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
E+ + E G K V Y+ ++ ++A
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVA 263
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K+ +M+ GV PN +++S +IN+ +G VE A LF +M GC+ N L++
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
C + A L++ + VA G S E +PN
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 500 -SHYSSFDKRFS-------------------FKPTTTTYNILMKACCTD--YYRVKALMN 537
+ YS F+ +P TY ++ C + + + +L+
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G +PN +++ I G+G VE A+++L+ M+ G P++ Y + R
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ ++AF LF+E++ +QPNLVTY T+L SR G + E Q
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 174/426 (40%), Gaps = 83/426 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
I C+ ++ F F + F LR DA N++ +I C + G
Sbjct: 286 INSLCVSGNVELAFALFAQMF---------LRGCDA--------NIHTFTPLIKGCFMRG 328
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++ + N+ +N+L++ + L+ L+V MQ+ G + ++ +Y+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ +G+ V A E + + + G + +V TY+ +V V + A + E
Sbjct: 389 ILIDGFAKSGDLVGASETW---NRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G TPNT+T+++ I G VE AM L E M GC PN N LL A +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++ AF LF+ +E ++ Q PN V
Sbjct: 505 YEEAFGLFQE-----------------------IEARNLQ-----PNLV----------- 525
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGS 561
TYN ++ + +M E + G +P+ I++ +I A
Sbjct: 526 --------TYNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 562 GNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A Q++ ++ PD++ YT+ I +++A + ++ + I PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 621 YITLLR 626
+ L+R
Sbjct: 633 WNALVR 638
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 154/390 (39%), Gaps = 60/390 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ II+ + G+ + A++ + + NI+ F L+ L L++
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M + G ++ +YN L+ C G+ A ++ ++ G L +V TYS ++
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV---CDQMQRSGCLP-NVTTYSILID 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA + A + M+S G PN +T++ +++ + +QA L E+M GC P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N ++ + + A +L E G+
Sbjct: 453 NTMTFNTFIKGLCGNGRVEWAMKLL-------------ERMQGH---------------- 483
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
P TTYN L+ A Y L E+ L PN +
Sbjct: 484 ------------------GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE- 608
++ ++ +G + ALQ+ G +PD + Y T I + ++K A L E
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Query: 609 --MKHYQIQPNLVTYITLLRARSRYGSLHE 636
MK + P+++TY +L+ + ++ E
Sbjct: 586 SSMKEW--HPDIITYTSLIWGACNWMNIEE 613
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 121/308 (39%), Gaps = 59/308 (19%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K V Y+ ++ +QM + +M G+ PN T++ L+ A V+ A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM GC P++ ++ + +A + D A L
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------------------------ 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
RF KP+ YN L+ C + R++ L+
Sbjct: 237 --------------------------AGRF--KPSVPVYNALIDGMCKE-GRIEVAIKLL 267
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G+ PN +S++ +I++ SGNVE A + M G ++ +T IK C
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+L +A L++ M +PN+V Y TL+ GSL E Q V M ++G N
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ---VCDQMQRSGCLPNV 384
Query: 657 TYLKELIE 664
T LI+
Sbjct: 385 TTYSILID 392
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
Query: 502 YSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S+ +F+ T +TY +++ + C D V+ ++ +M+ G++ + +I+
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDM--VQYILQQMKMDGINCCEDLFICIING 118
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ E AL++ + E G P V Y + + + + L+ MK + PN
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ TY LL+A + + + ++ +M G + ++ C+ G I D +
Sbjct: 179 VFTYNILLKALCKNDRVDAAHK---LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 677 NQG 679
G
Sbjct: 236 LAG 238
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 20/381 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
GD + +R+++E ++ +T +I +N+L++ L ++ +++ M+ +G D+ +Y
Sbjct: 146 GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITY 205
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ + C + A E + E+K + LK +V +YST++ QMA+K
Sbjct: 206 NALINSFCKFKGMLRAFEFFREMKDKD----LKPNVISYSTLIDALCKEGMMQMAIKFFV 261
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T+SSLI+A AG + +A L +EMLQ + N LL E
Sbjct: 262 DMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG 321
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A LFR+ + K V + T I H +S+ +
Sbjct: 322 MMNEAEELFRA--MGKAGVT--PNLQAYTALIHG--HIKVRSMDKAMELFNEM------R 369
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP + ++ C++ K +M EM+ G+ N + +T L+DA +GN
Sbjct: 370 EKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +L+ MR+ G VV + I + +++A F M + +QPN+ Y L+
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489
Query: 626 RARSRYGSLHEVQQCLAVYQD 646
+ + + ++ QD
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQD 510
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 174/383 (45%), Gaps = 33/383 (8%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VF++L +V L+ + + M K V+ S N L AG L+++ +
Sbjct: 64 VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFF--- 120
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G+ VFTY+ ++ A + E M G+TP+ +T+++LI+
Sbjct: 121 RDMVGAGIAP-TVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
GL+++++ LFEEM GCEP+ N L+ + + RAF FR +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM----------K 229
Query: 471 DYDGNTDRISNMEHKD---KQSITNTP--NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
D D + IS D K+ + FV + R P TY+ L+ A
Sbjct: 230 DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT-------RVGLLPNEFTYSSLIDAN 282
Query: 526 CTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C +A M +EM + N +++T L+D G + A ++ + M + G++P++
Sbjct: 283 CKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNL 342
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
AYT I ++ + + +A LF EM+ I+P+++ + T++ S ++++C +
Sbjct: 343 QAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC---SESKLEECKII 399
Query: 644 YQDMWKAGYKANDTYLKELIEEW 666
+M ++G AN L++ +
Sbjct: 400 MTEMKESGIGANPVIYTTLMDAY 422
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 172/428 (40%), Gaps = 65/428 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P C + G+ SR + D+ + ++ +N ++ D+ +
Sbjct: 95 PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQE---IYGEVKHLEAKGVLKLDVFTYST 368
++ M+K+G+ D+ +YN L+ G L E ++ E+K + + DV TY+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDG---YGKIGLLDESVCLFEEMKFMGCEP----DVITYNA 207
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F K A + +M + PN I++S+LI+A G+++ A+ F +M + G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN + L+ A +A AF L D + EH D
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFML--------------------ADEMLQ-EHVDLN 306
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+T Y L+ C + +A L M G++P
Sbjct: 307 IVT--------------------------YTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI +++ A+++ MRE + PD++ + T + +L++ +
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EMK I N V Y TL+ A + G+ E L +D+ G + LI+
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDL---GTEVTVVTFCALIDGL 457
Query: 667 CE-GVIQD 673
C+ G++Q+
Sbjct: 458 CKRGLVQE 465
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 166/424 (39%), Gaps = 30/424 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K + ++ A + K PN+ T+ID +C + M AI +
Sbjct: 203 ITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLID--ALCKEGMMQMAIKFF 260
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
D+ + N + ++SL++ N A +L + M + V ++ +Y LL C
Sbjct: 261 VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEE 320
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E++ + K + ++ Y+ ++ + A+++ +M + P+
Sbjct: 321 GMMNEAEELFRAM----GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
+ W +++ + +E+ + EM ++G N L+ A +A A L
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436
Query: 457 --RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R T V DG R E +Y +P
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKRGLVQEA---------------IYYFGRMPDHDLQPN 481
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L+ C + K L +EM+ + P+ I++T +ID GN + AL +
Sbjct: 482 VAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRN 541
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G+ D+ AYT+ + + +++QA EM I P+ LLR G
Sbjct: 542 KMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELG 601
Query: 633 SLHE 636
++ E
Sbjct: 602 NIDE 605
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 6/203 (2%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N I T++D G+ ++ + E++R + + F +L++ ++ + +
Sbjct: 411 NPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYF 470
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + ++A Y L+ C A++++ E ++ K ++ D Y+ ++
Sbjct: 471 GRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE---MQDKNMIP-DKIAYTAMIDG 526
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+Q AL ++ M+ G+ + ++SL+ + G V+QA EM+ G P+
Sbjct: 527 NLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586
Query: 433 SQCCNILLQACVEACQFDRAFRL 455
C LL+ E D A L
Sbjct: 587 ETLCTRLLRKHYELGNIDEAIEL 609
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 177/409 (43%), Gaps = 33/409 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLG 319
V G C G +R + +++ V LN +N L++ +D + EV K M+ G
Sbjct: 140 VDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVA-EVLKEMESGG 198
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + +Y IL+ AG+ + ++ E+K G DV+ YS ++ + A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG----DVYFYSAVINAYCRAGNV 254
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A +V ++ + G+ PN T+ +LIN G +E A L +M G N N +
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTP 494
+ D+A + + + + L + Y NT R++ ME K T
Sbjct: 315 IDGYCRHGMVDKALEI--KAVMERMGIQL-DVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
N V S+Y S+ TT +I K D + L +M G P+ +++ ++
Sbjct: 372 NGV-ESNYVSY---------TTLISIHSKE--GDMVEARRLFRDMEGKGSRPSVVTYNVM 419
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID SG++ A + K M + G+ PDV Y + + ++ A LFEEMK
Sbjct: 420 IDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGA 479
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+PN+V Y L+ ++ G E Q Y +M AG +DT L+
Sbjct: 480 KPNVVAYTALISGLAKEGRSEEAFQ---FYDNMLAAGLTPDDTLYSMLV 525
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 174/404 (43%), Gaps = 45/404 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E + ++ ++Y +++L+ + +V M++ G + +YN+L+ C
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G +E +G K +E G++ D FTY ++ ++ A + ++M A +
Sbjct: 164 RSGAV---EEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +++LI+ G ++A + +EM+ AG +PN + L++ + Q DRA L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
+ M + T T N + H+ +K+ +F+
Sbjct: 280 LK-----------------------QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY+I++ C KA L+ EM T GL PN + LI G
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV A +I M + + PD+ Y + I + R++++ F +M+ + PN TY
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
L+ + G L +Q + Q M G K ND +L+E +
Sbjct: 437 GLIHGYLKNGDLESAEQ---LVQRMLDTGLKPNDVIYIDLLESY 477
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/587 (21%), Positives = 240/587 (40%), Gaps = 105/587 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 224 FCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYICRTIIDVCG 267
VR+ + D ++ A R + SPN+Y +I G
Sbjct: 280 LKQMVRD-SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH--G 336
Query: 268 IC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMAD 323
+C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D
Sbjct: 337 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ YN L+ G + + + + ++ +G+L + FTYS ++ + + A
Sbjct: 397 LYCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAE 452
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 453 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 512
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + AFR+ +S +E VP+ H
Sbjct: 513 SSSGNMEAAFRV-----------------------LSEIEKNGS---------VPDVH-- 538
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
Y+ L+ C R KA +++EM G+ PN + + LID S
Sbjct: 539 -------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 585
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 586 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 645
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L S G L +Q + + ++M+ G+ A+ + L++ +C+
Sbjct: 646 SVLTTGCSSAGDL---EQAMFLIEEMFLRGH-ASISSFNNLVDGFCK 688
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 52/267 (19%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ +G V+ A + M G P+ +CCN LL+ + RA + W + +
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL------RADAMALLWKVRE 106
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V G P TY+ L++
Sbjct: 107 FMVGAG-----------------------------------------ISPDVYTYSTLIE 125
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A C ++ K ++ EMR G N +++ +LI SG VE A K M + G+ P
Sbjct: 126 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 185
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D Y I +S+R +A +L +EM +++PN+V Y L+ R G+ E
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA---F 242
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++M AG + N L+ C+
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCK 269
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 54/405 (13%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ C ++I G C G K+ I E L + ++ +N L+ + ++ L
Sbjct: 139 PDVIACTSLIR--GFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL 196
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV ++++ V D+ +YN +L++ C +G A E+ E DV TY+ +
Sbjct: 197 EV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP----DVITYTIL 249
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+K+ ++M G P+ +T++ LIN G +++A+ M GC
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 309
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVA-------------LGEDYD 473
+PN NI+L++ ++ A RL S + V LG D
Sbjct: 310 KPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID 369
Query: 474 GNTDRISNMEHKDKQS-ITNTPNFVPNSHYSSFDKRFSFK-------------PTTTTYN 519
+E K + N+ ++ P H +K+ P TYN
Sbjct: 370 -------VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 422
Query: 520 ILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ A C D +V A ++N++ + G SP I++ +ID G E A+++L+ MR
Sbjct: 423 TLLTALCKDG-KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ PD++ Y+T ++ R ++ +A +F +M+ I+P+ VTY
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 163/359 (45%), Gaps = 37/359 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+L+ C +G A E+ LE V DV TY+TI++
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEV------LERMSVAP-DVVTYNTILRSLC 219
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + L P+ IT++ LI A N V QAM L +EM + GC+P+
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279
Query: 435 CCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTDRISN 481
N+L+ + + D A + + + ++ + G D +S+
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER-LLSD 338
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K + P + +YN L+ C +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ + M + G P+ +++ L+ A G V+ A++IL + G SP ++ Y T
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + A L EEM+ ++P+++TY TLLR R G +V + + ++ DM
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG---KVDEAIKIFHDM 514
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 46/335 (13%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+K G D+ +YN+L+ C G E + ++ + G K +V T++
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-KPNVITHNI 318
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A ++ DML G +P+ +T++ LIN L+ +A+ + E+M + G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGED--YDGNT 476
C PNS N LL + + DRA T + AL +D D
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI----LMKACCTDYYRV 532
+ ++ + K P TYN L K T+Y
Sbjct: 439 EILNQLSSK------------------------GCSPVLITYNTVIDGLTKVGKTEY--A 472
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ EMR GL P+ I+++ L+ G G V+ A++I M + P V Y +
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++ +A M +P TY L+
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 57/289 (19%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK E M+ G P+ I +SLI +G ++A + E + +G P+ N+L+
Sbjct: 125 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIG 184
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ + D+A +
Sbjct: 185 GYCKSGEIDKALEVL--------------------------------------------- 199
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM-RTVGLS--PNHISWTILIDAC 558
+R S P TYN ++++ C D ++K M + R + P+ I++TILI+A
Sbjct: 200 -----ERMSVAPDVVTYNTILRSLC-DSGKLKEAMEVLDRQLQRECYPDVITYTILIEAT 253
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G PDVV Y I + RL +A M Y +PN+
Sbjct: 254 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNV 313
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+T+ +LR+ G + ++ L+ DM + G + LI C
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLS---DMLRKGCSPSVVTFNILINFLC 359
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G K R + S R DA +
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + N +N L++
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINF--LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHG 392
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K +E + M G D+ +YN LL A C G A EI + L +KG
Sbjct: 393 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI---LNQLSSKGC 449
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+++ E+M G+ P+ IT+S+L+ G V++A+
Sbjct: 450 SPV-LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+F +M +P++ N ++ +A Q RA
Sbjct: 509 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 543
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+KR L A+ + KH PN ++ G C + RAI E + S+ +
Sbjct: 360 RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH--GFCQEKKMDRAIEYLEIMVSRGCYPD 417
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L+ D K +E+ + G + +YN ++ G T A E+
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E++ KG LK D+ TYST+++ A+K+ DM + P+ +T+++++
Sbjct: 478 EMRR---KG-LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A +A+ M++ GC+P IL++
Sbjct: 534 CKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E L+ L+ M G PDV+A T+ I+ RS + K+A + E +++ P+++T
Sbjct: 119 NGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVIT 178
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
Y L+ + G E+ + L V + M A
Sbjct: 179 YNVLIGGYCKSG---EIDKALEVLERMSVA 205
>gi|168024390|ref|XP_001764719.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684013|gb|EDQ70418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1020
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 136/604 (22%), Positives = 250/604 (41%), Gaps = 117/604 (19%)
Query: 10 SSSSAIVATQTRLYNHRNKPNKHP--VTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDL 67
S S+A V +T H KP P V KL +AS L + LLST
Sbjct: 166 SYSTARVLQET--ATHGGKPTTSPKVVAKLDSVASEKLL---------RPKLLST----- 209
Query: 68 SSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREG 127
D+ + K GR+ A I E + + G KF L ++ +G +K
Sbjct: 210 --------DVVKSVRKKGRVLP-ASIAEVLPLKPGTSIKFYIDLYASLLKAGRIK----- 255
Query: 128 RIDCVV--GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
DC+V G + KL++L + +++ +++ K + G VE +++ +
Sbjct: 256 --DCLVLLGEINKLDKLSL--MKVNHSKFYEVCKTK-------GTVEDAFTFAKIMRVY- 303
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP----RADILF----CNFVREFGKKRDL 237
L ++ +C + D++ A+R +V +AD +F + + GK L
Sbjct: 304 ---STLQHYTMLLSVCCHAKDIDGALRVLALVESRGFKADCVFYTTLISACSKAGKVDLL 360
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
L D + N++ +ID C G K+ Y + S++V + +FN+L
Sbjct: 361 FQILHEMDVAGVEA---NVHTFGAMIDGCARAGQLPKAFGAYGIMISKDVKPDRVIFNTL 417
Query: 298 MN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+N V A F + + V D +Y L+ AC G A E+Y ++
Sbjct: 418 INACSRVGAVQRAFDVLADMKSEATPVKPDHVTYGALISACAKGGEVGRALEVYQSMREN 477
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ KG L Y+ V + AL + +D+L GV P+ + +S+L++A ++G
Sbjct: 478 DVKGFLA----CYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGD 533
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V++A + + M ++G +P + + L+ C ++++ ++ SK
Sbjct: 534 VDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSK---------- 583
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYR 531
+PT +TYN LM A C + R
Sbjct: 584 -------------------------------------LRPTVSTYNALMTALCEAKQFDR 606
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+++N+++ G +PN +S++IL+ AC G + AL + R +G+ P++V + I
Sbjct: 607 ALSVLNDLKDAGRTPNQVSYSILLKACEREGKADMALDLYTTARAEGIKPNLVICDSIIG 666
Query: 592 VCVR 595
+C++
Sbjct: 667 LCLQ 670
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 167/413 (40%), Gaps = 80/413 (19%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---------------NAHDLKFTLEVYKNMQKLGVMA 322
YE +++ + + F +M V +A D+ L V ++ G A
Sbjct: 280 FYEVCKTKGTVEDAFTFAKIMRVYSTLQHYTMLLSVCCHAKDIDGALRVLALVESRGFKA 339
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D Y L+ AC AG L +I E ++ GV + +V T+ ++ A A A
Sbjct: 340 DCVFYTTLISACSKAGKVDLLFQILHE---MDVAGV-EANVHTFGAMIDGCARAGQLPKA 395
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC--EPNSQCCNILL 440
M+S V P+ + +++LINAC+ G V++A + +M +P+ L+
Sbjct: 396 FGAYGIMISKDVKPDRVIFNTLINACSRVGAVQRAFDVLADMKSEATPVKPDHVTYGALI 455
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AC + + RA +++S M D
Sbjct: 456 SACAKGGEVGRALEVYQS-----------------------MREND-------------- 478
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
K Y + AC D A+ +++ G+ P+ + ++ L+DA
Sbjct: 479 ----------VKGFLACYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAA 528
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G SG+V+ A IL IMR+ GM P V Y++ + VC ++ ++E ++ +++P +
Sbjct: 529 GHSGDVDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSKLRPTV 588
Query: 619 VTYITLLRARSRYGSLHEVQQ---CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY L+ A L E +Q L+V D+ AG N L++ CE
Sbjct: 589 STYNALMTA------LCEAKQFDRALSVLNDLKDAGRTPNQVSYSILLKA-CE 634
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 161/393 (40%), Gaps = 84/393 (21%)
Query: 305 LKFTLEVYKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+KF +++Y ++ K G + D + N L K + N E+ + KG ++
Sbjct: 238 IKFYIDLYASLLKAGRIKDCLVLLGEINKLDKLSLMKVNHSKFYEV------CKTKGTVE 291
Query: 361 LDVFTYSTIVKVFADAKWWQM-------------ALKVKEDMLSAGVTPNTITWSSLINA 407
D FT++ I++V++ + + M AL+V + S G + + +++LI+A
Sbjct: 292 -DAFTFAKIMRVYSTLQHYTMLLSVCCHAKDIDGALRVLALVESRGFKADCVFYTTLISA 350
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C+ AG V+ + EM AG E N ++ C A Q +AF +
Sbjct: 351 CSKAGKVDLLFQILHEMDVAGVEANVHTFGAMIDGCARAGQLPKAFGAY----------- 399
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
M KD KP +N L+ AC
Sbjct: 400 ------------GIMISKD------------------------VKPDRVIFNTLINACSR 423
Query: 526 CTDYYRVKALMNEMRT--VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
R ++ +M++ + P+H+++ LI AC G V AL++ + MRE+ + +
Sbjct: 424 VGAVQRAFDVLADMKSEATPVKPDHVTYGALISACAKGGEVGRALEVYQSMRENDVKGFL 483
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
YT A+ C + L A ++++++ ++P+ V + L+ A G +V + ++
Sbjct: 484 ACYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSG---DVDKAFSI 540
Query: 644 YQDMWKAGYKANDTYLKEL------IEEWCEGV 670
M K+G K L + EW +G+
Sbjct: 541 LDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGL 573
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 159/394 (40%), Gaps = 56/394 (14%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y + S +K G+++ I+ + V+ E NV F +M I R G++
Sbjct: 343 FYTTLISACSKAGKVDLLFQILHEMDVAGVEANVHTFGAM---------IDGCARAGQLP 393
Query: 131 CVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKE 190
G + V P + F L N C R+ G V+ ++ ++ PVK
Sbjct: 394 KAFGAYGIMISKDVKPDRVI----FNTLINACSRV---GAVQRAFDVLADMKSEATPVK- 445
Query: 191 LDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
PD + Y + I C E G+ ++ ++R D
Sbjct: 446 --------------PD---HVTYGAL-----ISACAKGGEVGRALEVYQSMRENDVK--- 480
Query: 251 LSSPNMYICRTI-IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKF 307
C T + C GD + AIY+DL V + F++L++ H D+
Sbjct: 481 ----GFLACYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGDVDK 536
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ M+K G+ Y+ L+ C G E+Y ++ + L+ V TY+
Sbjct: 537 AFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSK----LRPTVSTYN 592
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ +AK + AL V D+ AG TPN +++S L+ AC G + A+ L+
Sbjct: 593 ALMTALCEAKQFDRALSVLNDLKDAGRTPNQVSYSILLKACEREGKADMALDLYTTARAE 652
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
G +PN C+ ++ C++ Q A L SW++
Sbjct: 653 GIKPNLVICDSIIGLCLQQIQTSVAAPLV-SWSI 685
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 25/211 (11%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F V G D+ A D +K P + +++ VC G++ K +YE
Sbjct: 518 EVFFSALVDAAGHSGDVDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYE 577
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+RS + + +N+LM A L V +++ G + SY+ILLKAC G
Sbjct: 578 GIRSSKLRPTVSTYNALMTALCEAKQFDRALSVLNDLKDAGRTPNQVSYSILLKACEREG 637
Query: 339 NTVLAQEIYG-----------------------EVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+A ++Y +++ A ++ + + + +
Sbjct: 638 KADMALDLYTTARAEGIKPNLVICDSIIGLCLQQIQTSVAAPLVSWSILPPADNSNISSQ 697
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+W AL + + AGV P S L+
Sbjct: 698 QQWVTWALTIYRQTIEAGVLPTVEILSQLLG 728
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 24/366 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +NV+ + + + L++ A L ++++ + GV +Y L+ C+A +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ ++ +G V TY+ I+ + A + + M+ G P+ +
Sbjct: 61 FDDARELFADMNR---RGCPPSPV-TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++++++ +G VE+A+ LF EM + GC PN + N ++ + + D+A ++F
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTT 517
E D D S D + N Y F + P+ T
Sbjct: 177 ----------EARDIPPDSWSYGILIDGLAKAGK----LNEAYKLFRRMLDSGITPSAVT 222
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+++ C Y +A L MR+ G P+ ++ ILIDA G ++ A ++LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+DG PDVV Y+T I R+ A L E+M Q +P +VT TL+ + G +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 636 EVQQCL 641
E ++ L
Sbjct: 343 EAREVL 348
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 173/383 (45%), Gaps = 23/383 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N++M+ + ++ L ++ M++LG + S+N ++ C A +++
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E +EA+ + D ++Y ++ A A A K+ ML +G+TP+ +T++ +I+
Sbjct: 174 HE---MEARDIPP-DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +++A+ LF+ M GC P+ NIL+ A + + D AFRL + T
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT------- 282
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DG+ + + + H + KPT T N L+ C
Sbjct: 283 ----DDGHVPDVVTYSTL-ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +++ M + G SP+ +++ L+ +G E A ++L M G++P+VV
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT + ++ RL +A +F +MK PNL TY L+ + S +V L ++
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG---FCSAGQVDGGLKLFG 454
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
+M AG + L E C+
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCK 477
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 185/443 (41%), Gaps = 36/443 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ + +ID G +R +++ L VT + + SL++ A+ E
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M + G +YN+++ A C G + +E +K + G + DV TY+T++
Sbjct: 67 LFADMNRRGCPPSPVTYNVIIDASCKRG---MLEEACDLIKKMIEDGHVP-DVVTYNTVM 122
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + AL + +M G TPN + +++I ++QA +F EM
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
P+S IL+ +A + + A++LFR ++ + + L D +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
+M K + T N + ++H D+ F P TY+ L+ C+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 528 DYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
RV + L+ +M P ++ LI +G ++ A ++L M G SPDVV
Sbjct: 303 -IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R+ + ++A L +M + PN+VTY L+ + L E V+
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA---CGVF 418
Query: 645 QDMWKAGYKANDTYLKELIEEWC 667
M +G N LI +C
Sbjct: 419 AQMKSSGCAPNLFTYTALILGFC 441
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 161/385 (41%), Gaps = 40/385 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ ++ +PN TII G+C +A ++ ++ ++++ + + + L
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTII--LGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A L ++++ M G+ +YN+++ CLA A E++ K + +
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF---KSMRS 248
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
KG + FT++ ++ A ++ + M G P+ +T+S+LI+ + V+
Sbjct: 249 KGC-RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVA 467
A HL E+M++ C+P N L+ +A + A + + S +
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G G T+R + S R P TY L+ C
Sbjct: 368 HGHCRAGQTERAREL-------------------LSDMVAR-GLAPNVVTYTALVSGLCK 407
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A + +M++ G +PN ++T LI +G V+G L++ M G+SPD V
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMK 610
Y T +S R +A + E +
Sbjct: 468 YGTLAAELCKSGRSARALEILREGR 492
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + ED+ + + N+L++ A +K EV M G D+ +YN L+
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C AG T A+E+ + + A+G L +V TY+ +V A A V M S+
Sbjct: 369 GHCRAGQTERAREL---LSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+++LI +AG V+ + LF EM+ AG P+ L ++ + RA
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 453 FRLFRSWTLSKTQVALGED 471
+ R S A G++
Sbjct: 485 LEILREGRESLRSEAWGDE 503
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++S N++ + +L+ +A + L+++ M G+ D Y L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C +G + A EI E + +V+ ++ V DA +MAL DM+ G
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVRDMVRGGQ 533
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEML 425
P +SL+ +G +A + EE++
Sbjct: 534 LPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 188/387 (48%), Gaps = 20/387 (5%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQ 316
C TII + G G +R I+E + V +++ + +L++ A LK +++ M+
Sbjct: 33 CVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMK 92
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ G ++ +YN L+ AC ++ G + ++ GV D+ TY+ +V
Sbjct: 93 EKGCSPNVLTYNTLINAC--TKRAYRLPDLVGLFEEMKQAGVQPNDI-TYNCMVNACVCL 149
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A ++ ++M + PN I+++++IN+ +G +++A+ LFEEM + G PNS
Sbjct: 150 SLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTY 209
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N LL+A ++++A LF + + + + Y NT + +M + F
Sbjct: 210 NSLLKAYAREGRYEKAMCLFVG---MEDEGCIPDLYTYNT--VIDMCGRGGLFAEAEGVF 264
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ +R P TYN ++ A + R + L+ M+ G +P+ ++ IL
Sbjct: 265 LEM-------QRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNIL 317
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+DA G +G+ A+QI ++ G SP++V+++ I + R ++A + EM+
Sbjct: 318 LDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGC 377
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCL 641
PN Y L+ + S +G +++V C+
Sbjct: 378 VPNATAYCGLMNSYSHHG-MYKVLCCI 403
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 51/286 (17%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ + +A ++ E M AGV P+ +++L++ A GL+++A LFE M +
Sbjct: 35 TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN N L+ AC + RA+RL D + E +
Sbjct: 95 GCSPNVLTYNTLINACTK-----RAYRL--------------------PDLVGLFEEMKQ 129
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTDYYRVKA-LMNEMRTVGLS 545
+ +P TYN ++ AC C + + ++ EM+ V
Sbjct: 130 AGV---------------------QPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCL 168
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN IS+T +I++ G SG ++ A+++ + M+E G SP+ Y + +K R R ++A L
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F M+ P+L TY T++ R G E + V+ +M + G
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAE---GVFLEMQRKG 271
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 141/337 (41%), Gaps = 38/337 (11%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G LA+EI+ + +K + V Y+ ++ +A + A + E M G +PN
Sbjct: 44 GKLGLAREIFEGM----SKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPN 99
Query: 398 TITWSSLINACAN-AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+++LINAC A + + LFEEM QAG +PN N ++ ACV FD A ++
Sbjct: 100 VLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQIL 159
Query: 457 RSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ +S T + G D + + K+
Sbjct: 160 KEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKE-------------------- 199
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P + TYN L+KA + Y + L M G P+ ++ +ID CG G
Sbjct: 200 LGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAE 259
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M+ G +PD V Y T + + R +A L + MK P+L TY LL
Sbjct: 260 AEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLD 319
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
A + GS E Q ++ ++ AG+ N LI
Sbjct: 320 AAGKAGSASEAMQ---IFHELKAAGHSPNLVSFSALI 353
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 69/434 (15%)
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFR------IVQLCVNKPDVNLA------IRYACIV 217
E+E+ + L+ FR + L+ E + I+ + + + LA + A +
Sbjct: 3 ELEIRGARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVA 62
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR- 276
P + + + K+ L A ++A K+ SPN+ T+I+ C +
Sbjct: 63 PSVHA-YTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLV 121
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++E+++ V N +N ++N V ++ K M+ + + ++ SY ++ +
Sbjct: 122 GLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSL 181
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G A E++ E+K L + +TY++++K +A ++ A+ + M G
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSP----NSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGC 237
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ T++++I+ C GL +A +F EM + GC P+ N +L A + + R
Sbjct: 238 IPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDA------YSKWSR 291
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R+ L KT KR P
Sbjct: 292 RGRARDLLKTM-----------------------------------------KRAGCTPD 310
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNIL+ A +A+ +E++ G SPN +S++ LI+ G G E A +
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370
Query: 573 IMREDGMSPDVVAY 586
MR G P+ AY
Sbjct: 371 EMRATGCVPNATAY 384
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++Y T+ID+CG G + ++ ++ +++ + T + +N++++ + + ++
Sbjct: 239 PDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDL 298
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M++ G D+ +YNILL A AG+ A +I+ E+K A G ++ ++S ++
Sbjct: 299 LKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELK---AAG-HSPNLVSFSALIN 354
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
++ +++ A + +M + G PN + L+N+ ++ G+
Sbjct: 355 MYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGM 396
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I G G + A +I + M + G++P V AYT + + LK+A++LFE MK
Sbjct: 36 IISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKG 95
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
PN++TY TL+ A ++ + + + ++++M +AG + ND
Sbjct: 96 CSPNVLTYNTLINACTK--RAYRLPDLVGLFEEMKQAGVQPND 136
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL M+ G SPN +++ LI+AC + + + + M++ G+ P+ + Y +
Sbjct: 86 ALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNA 145
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
CV A + +EMK PN+++Y T++ + R G L E + ++++M + G
Sbjct: 146 CVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVE---LFEEMKELGR 202
Query: 653 KANDTYLKELIEEW 666
N L++ +
Sbjct: 203 SPNSWTYNSLLKAY 216
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 183/396 (46%), Gaps = 32/396 (8%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLK 306
+HL +PN++ +ID G+ +++RA++ +++ + ++ +NSL++ +L+
Sbjct: 192 EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ M+K G AD+ +YN L+ G A +GE+K L GV+ +V T
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL---GVMA-NVVTL 307
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ PN T++SL++ AG ++ A+ L +EM+
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367
Query: 427 AGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G PN +++ C E +VA+ +D +R ++
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEG------------------KVAVADDVLSLMERAGVKANE 409
Query: 486 DKQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACC--TDYYRVKALMNE 538
+ +F+ + + D K + + Y L+ C K+L+++
Sbjct: 410 LLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHK 469
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL PN + +T ++DA +G A+ +L + + G+ P+VV Y I ++
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +A S F++M+ + PN+ Y TL+ + GSL
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSL 565
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 227/547 (41%), Gaps = 70/547 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L D G ++ V + + + R+P +++L N+ L R +P ++
Sbjct: 143 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG-GLVRRLFEHLPAPNVFT 201
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N V +F K+ +LV A + K SP++ ++ID G CG+ + + ++R
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +N+L+N + KF + M++LGVMA++ + + + A C G
Sbjct: 262 KSGCAADVVTYNALINCFS---KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ +++ +G++ + FTY+++V A A+ + ++M+ G+ PN
Sbjct: 319 LVREAMKLFAQMR---VRGMMP-NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T++ +++ G V A + M +AG + N L+ +RA L
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434
Query: 459 -----------------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS- 500
W L K Q D ++ HK + PN+
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQ---------KLDEAKSLLHK-----MDDCGLRPNTV 480
Query: 501 -HYSSFDKRF------------------SFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + D F +P TY L+ C Y + ++M
Sbjct: 481 IYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R +GL PN +T LID G++ A+ ++ M + GMS D V YT+ I ++ L
Sbjct: 541 RELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDL 600
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ AF+L +M +Q +L Y + S + +++ +Q+ V +M G + T
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFI---SGFCNMNMMQEARGVLSEMIGTGITPDKTAY 657
Query: 660 KELIEEW 666
LI ++
Sbjct: 658 NCLIRKY 664
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 160/397 (40%), Gaps = 62/397 (15%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
R ++E L + NV + FN +++ +L ++ M+ +G D+ +YN L+
Sbjct: 188 RRLFEHLPAPNV----FTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDG 243
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G + + E++ K DV TY+ ++ F+ W + A +M G
Sbjct: 244 YGKCGELEEVELLVSEMR----KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N +T S+ ++A GLV +AM LF +M G PN L+ +A + D A
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L + M H+ VPN
Sbjct: 360 VL-----------------------LDEMVHQ---------GLVPN-------------- 373
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY +++ C + A +++ M G+ N + +T LI + N E AL +L
Sbjct: 374 -VVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLL 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ GM DV Y T I + ++L +A SL +M ++PN V Y T++ A +
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G E +A+ + +G + N LI+ C+
Sbjct: 493 GKESEA---VALLHKIPDSGLQPNVVTYCALIDGLCK 526
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+NI++ C + +AL M+ +G SP+ +++ LID G G +E +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ MR+ G + DVV Y I + +++A+S F EMK + N+VT T + A +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQGEV 681
G V++ + ++ M G N+ L++ C+ V+ D+ +QG V
Sbjct: 317 EGL---VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 371
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 34/302 (11%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-- 458
+ +L++ A+ GL++ A+ + Q PN++ CN +L Q RLF
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP 195
Query: 459 ----WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKP 513
+T + L + + R + K ++ +P+ V NS + K +
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMK---AMGCSPDVVTYNSLIDGYGKCGELEE 252
Query: 514 TTTTYNILMKA-CCTDYYRVKALMN----------------EMRTVGLSPNHISWTILID 556
+ + K+ C D AL+N EM+ +G+ N ++ + +D
Sbjct: 253 VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVD 312
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A G V A+++ MR GM P+ YT+ + ++ RL A L +EM H + P
Sbjct: 313 AFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 372
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
N+VTY ++ + G + L++ M +AG KAN+ LI G +KN
Sbjct: 373 NVVTYTVMVDGLCKEGKVAVADDVLSL---MERAGVKANELLYTTLI----HGHFMNKNS 425
Query: 677 NQ 678
+
Sbjct: 426 ER 427
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 44/367 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + K GRL++ A+++ +V +G V ++++ ++ G+ K EG++
Sbjct: 342 YTSLVDGTCKAGRLDD-AIVLLDEMVHQGLVP---NVVTYTVMVDGLCK---EGKVAVAD 394
Query: 134 GVLKKLNELGVAPLELFDGS---GFKLLKNECQRLLD------SGEVEMFVGLMEVLEEF 184
VL + GV EL + G + KN +R LD + +E+ V L L
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNS-ERALDLLNEMKNKGMELDVSLYGTLIWG 453
Query: 185 RLPVKELDEEFRIVQL---CVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSAL 241
V++LDE ++ C +P+ + Y I+ D F + GK+ + V+ L
Sbjct: 454 LCKVQKLDEAKSLLHKMDDCGLRPNT---VIYTTIM---DAFF-----KAGKESEAVALL 502
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
S PN+ +ID G+C G ++ + ++ +R + N+ V+ +L++
Sbjct: 503 HKIPDSGLQ---PNVVTYCALID--GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
L + + M G+ D Y L+ G+ L + K +E
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGD--LQGAFALKAKMIETG- 614
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+LD++ Y+ + F + Q A V +M+ G+TP+ ++ LI G +E+A
Sbjct: 615 -LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEA 673
Query: 418 MHLFEEM 424
L EM
Sbjct: 674 SSLQNEM 680
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 19/332 (5%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-----KHLEAKGVLKLD 362
LEV K+++K G+ SYN + A G A ++ V ++ A L+ D
Sbjct: 3 ALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPD 62
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
T+ST + A WQ A+ + +M + G+ PN T+++LI AC G V +A +FE
Sbjct: 63 TVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFE 122
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M G N + +C + + RA +L Q L + IS
Sbjct: 123 RMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNL----QAYSAAISAC 178
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E + P KP Y+ +M AC + + +M+
Sbjct: 179 EKAAEAR--------PALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMK 230
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL+P+ ++++ LI A +G AL++ ++M + G+ P+V+AYT AI C ++ +
Sbjct: 231 REGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWR 290
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++ L E MK +++P+ V Y ++ A SR G
Sbjct: 291 RSLGLLERMKADKLRPDAVAYNFVISALSRGG 322
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 151/354 (42%), Gaps = 55/354 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ T I C G++ ++ +Y ++ +Q + N + F +L+ + EV
Sbjct: 61 PDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEV 120
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ MQ G++ ++ ++ + +C G+ A ++ ++ + AKG+ + ++ YS +
Sbjct: 121 FERMQARGIVGNVYTFTAAISSCEKLGDWQRALKL---LEEMIAKGI-QPNLQAYSAAIS 176
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + AL + E M + + P+ I +S+++ AC AGL E A +F++M + G P
Sbjct: 177 ACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTP 236
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+QA A ++ RA +F+
Sbjct: 237 DVVAYSTLIQAYQRAGEWSRALEVFQ---------------------------------- 262
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
++ +P Y + AC ++ R L+ M+ L P+ +
Sbjct: 263 -------------LMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAV 309
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++ +I A G + L +L+++ ED P++ Y T IK C + + ++A
Sbjct: 310 AYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQWEKAL 363
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 42/328 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + K + A+ Y + PN + +I C G K+ ++E
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++ + N+Y F + ++ D + L++ + M G+ ++ +Y+ + AC A
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAE 183
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ G ++ + + + K D+ YS ++ A W+ A ++ + M G+TP+ +
Sbjct: 184 ---ARPALGLLERMTNEKI-KPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+S+LI A AG +A+ +F+ M +AG PN + AC +A ++ R+ L
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERM 299
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
K + ++ G +D + +E + Q
Sbjct: 300 KADKLRPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQ------------------- 340
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL 535
P +TY ++KAC + KAL
Sbjct: 341 -----PNISTYCTVIKACGDNGQWEKAL 363
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 40/192 (20%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC--GGS---- 561
S +P T T++ + AC ++ R + +EM G+ PN ++ LI AC GG
Sbjct: 58 SLRPDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKA 117
Query: 562 -----------------------------GNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G+ + AL++L+ M G+ P++ AY+ AI
Sbjct: 118 FEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISA 177
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
C ++ + A L E M + +I+P+++ Y ++ A + G + ++Q M + G
Sbjct: 178 CEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAAR---IFQKMKREGL 234
Query: 653 KANDTYLKELIE 664
+ LI+
Sbjct: 235 TPDVVAYSTLIQ 246
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 32/199 (16%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL-----------MNEMRTVGLSPNHISWTILIDACGGS 561
PT +YN M A + +AL N++ L P+ ++++ I AC
Sbjct: 17 PTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDTVTFSTAISACAKG 76
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + A+ + M G+ P+ + I C + ++ +AF +FE M+ I N+ T+
Sbjct: 77 GEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTF 136
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
+ + + G W+ K L+E+I +G+ + +
Sbjct: 137 TAAISSCEKLGD--------------WQRALK----LLEEMI---AKGIQPNLQAYSAAI 175
Query: 682 TLCRRTNSQRPQSLLLEKV 700
+ C + RP LLE++
Sbjct: 176 SACEKAAEARPALGLLERM 194
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE---------EMKHYQIQ 615
E AL++LK + ++G++P V+Y A+ R+ R ++A S+F+ ++ ++
Sbjct: 1 EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
P+ VT+ T + A ++ G E Q+ + +Y +M G + N+ LI
Sbjct: 61 PDTVTFSTAISACAKGG---EWQRAMNMYHEMEAQGIEPNEFTFAALI 105
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 184/430 (42%), Gaps = 63/430 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
P+ Y T+I G+CG S A + ED+ + ++ + L+ K +
Sbjct: 164 PDAYTYNTLIR--GLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G D+ +YN++L C G A E +K+L + G + + +Y+ +
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF---LKNLPSYGC-EPNTVSYNIV 277
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W+ A K+ E+M G PN +T++ LI+ GLVE AM + E+M Q GC
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGC 337
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PNS N LL A F + ++ ++ + V+ G
Sbjct: 338 TPNSLSYNPLLHA------FCKQKKIHKAMEFVELMVSRG-------------------- 371
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
P +YN L+ A C + A L+++++ G SP
Sbjct: 372 ---------------------CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
IS+ +ID +G + AL++L M G+ PD++ Y+T R R+++A F
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ I+P Y +L + E + ++ M +G N++ L+E
Sbjct: 471 KVQDMGIRPTAALYNAILLGLCKR---RETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527
Query: 668 -EGVIQDKNQ 676
EG++++ +
Sbjct: 528 YEGLVKEARE 537
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ V D +YN L++ C G T A + ++ + +G L DV TY+ +++
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAV---LEDMFRRGCLP-DVVTYTILLEATCKRS 215
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ A+K+ ++M G P+ +T++ ++N G VE AM + + GCEPN+ N
Sbjct: 216 GYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYN 275
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
I+L+ A +++ A +L + M HK PN V
Sbjct: 276 IVLKGLFTAERWEDAEKL-----------------------MEEMAHKG-----CPPNVV 307
Query: 498 PNSHYSSFDKR----------------FSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ SF R + P + +YN L+ A C KA+ + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G P+ +S+ L+ A +G V+ A+++L +++ G SP +++Y T I ++ +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
K+A L +EM +QP+++TY T+ R + E + QDM
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ M SR Y D+ S N L N ++V +E+ ++ G + SYN +
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDV-------AIELLHQLKDKGCSPVLISYNTV 417
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI-------------VKVFADAK 377
+ AG T A E+ E + +KG L+ D+ TYSTI V+ F +
Sbjct: 418 IDGLTKAGKTKEALELLDE---MTSKG-LQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473
Query: 378 WWQM----------------------ALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ A+ + M+S+G PN T++ L+ A GLV+
Sbjct: 474 DMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVK 533
Query: 416 QAMHLFEEMLQAG 428
+A LF ++ G
Sbjct: 534 EARELFAQLCSRG 546
>gi|384253709|gb|EIE27183.1| hypothetical protein COCSUDRAFT_38919 [Coccomyxa subellipsoidea
C-169]
Length = 675
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 196/489 (40%), Gaps = 99/489 (20%)
Query: 279 YEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++++RS+ + + + N L+N + DL +Y + G+ ++N LLKAC
Sbjct: 192 FQEMRSRCIWSPQDTHTVNILLNALSSDLPAAFAMYNELMAGGLEPTRVTFNTLLKACMR 251
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N A E+ ++ +G + TY+T +K + + + ALKV M + G P
Sbjct: 252 GQNAARADEVLAWMRERGCQG----NEHTYNTYIKAASYSGDVERALKVLPQMAADGCAP 307
Query: 397 NTITWSSLINACAN-----------AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
W SLI AC A VE A+ L+ +M +G P CN LL AC++
Sbjct: 308 TPAVWGSLIVACGKSPKVAPQPFGMARQVESALGLWRQMAASGTTPTVDNCNALLTACID 367
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q +RA ++RS
Sbjct: 368 CDQGERALDIYRSM---------------------------------------------- 381
Query: 506 DKRFSFKPTTTTYNILMKAC---------CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
K +P TYN+ ++AC + L+ +MR G++P+ + T ++
Sbjct: 382 -KDLGVEPDLVTYNLAVRACGGQSGSKLRSAQLDQAFQLLADMRAAGVAPDQQTVTSMLA 440
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQI 614
C +G AL + + +++ G+ DV + I + A ++F +M ++
Sbjct: 441 LCAQAGAGRRALALYEEVKDSGIRIDVALQSALIAALGSEGLAEDALAVFRKMVWGPRRM 500
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+PN TY + R G V++ L Y+ M + G++ ++ +E+I E + +K
Sbjct: 501 KPNEHTYRLVTRICREAGL---VKEALHAYRGMRRMGFRPSNAEWREMISAAVEAAMAEK 557
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRM 734
+ + VA L A++ +DL GLT VEAR VL VL
Sbjct: 558 DGG--------------------DLVASCLGLDEAQSW-VDLHGLTSVEARAAVLCVLSS 596
Query: 735 MKENYSLGT 743
++ + G
Sbjct: 597 VQHRAAAGA 605
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 15/234 (6%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
+ FG R + SAL + ++P + C ++ C C ++ IY ++ V
Sbjct: 328 QPFGMARQVESALGLWRQMAASGTTPTVDNCNALLTACIDCDQGERALDIYRSMKDLGVE 387
Query: 289 LNIYVFN---------SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +N S + + L ++ +M+ GV D + +L C AG
Sbjct: 388 PDLVTYNLAVRACGGQSGSKLRSAQLDQAFQLLADMRAAGVAPDQQTVTSMLALCAQAGA 447
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPN 397
A +Y EVK +++DV S ++ + AL V M+ + PN
Sbjct: 448 GRRALALYEEVK----DSGIRIDVALQSALIAALGSEGLAEDALAVFRKMVWGPRRMKPN 503
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+ + C AGLV++A+H + M + G P++ ++ A VEA ++
Sbjct: 504 EHTYRLVTRICREAGLVKEALHAYRGMRRMGFRPSNAEWREMISAAVEAAMAEK 557
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 55/404 (13%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA---GNTVL--AQE 345
+FNSL++ + D + ++ K M + G YNIL+ C + G VL A++
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173
Query: 346 IYGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKVF 373
YGE ++ + +KG + D TYS ++
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP-DTSTYSKVIGYL 232
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A + A ++ ++M G+ P+ +++LI++ AG +EQA + F+EM + GC PN
Sbjct: 233 CNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNV 292
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVAL--GEDYDGNTDRISNMEH 484
L+ A +++ + +A ++ LSK T AL G G ++ S +
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYE-MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTV 542
K+ P+ + H+ D S +P TY L+ C Y + L+ M
Sbjct: 352 IMKKENVEIPDV--DMHFRVVDGA-SNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PNH+ + LID C +G ++ A ++ M E G P+V Y++ I + KRL A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +M PN+V Y ++ + G E + + + ++
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 180/414 (43%), Gaps = 57/414 (13%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
+CGI G + K+ + ++ S+ + ++ ++ NA ++ ++++ M++ G+
Sbjct: 197 LCGI-GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y L+ + C AG A+ + E +E G +V TY+ ++ + ++ A
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDE---MERDGCAP-NVVTYTALIHAYLKSRKVSKA 311
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---------------- 426
+V E MLS G TPN +T+++LI+ AG +E+A +++ M +
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVD 371
Query: 427 -AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
A EPN L+ +A Q A L +S ++ + YD D
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN-HVVYDALIDGCCKAGKL 430
Query: 486 DK-QSITNTP---NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNIL 521
D+ Q + T + PN + YSS DKR S P Y +
Sbjct: 431 DEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEM 490
Query: 522 MKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ C + Y++ +M E G +PN +++T +ID G SG VE L++L+ M
Sbjct: 491 IDGLCKVGKTDEAYKLMVMMEEK---GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G +P+ V Y I C + L +A L EEMK ++ Y ++ +R
Sbjct: 548 KGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR 601
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 33/326 (10%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+ ++ +A ++ A+ M ++ PN +T+ L+ C N + + +
Sbjct: 41 DTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRIL 100
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------------VALG 469
M+ GC P+ + N L+ A + + A++L + Q +
Sbjct: 101 SMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSS 160
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------SFDKRFS---------FKP 513
E+ + ++ + + N V S++S F+K ++ F P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+TY+ ++ C KA L EM+ G++P+ +T LID+ +G +E A
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M DG +P+VV YT I ++S+++ +A ++E M PN+VTY L+ +
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDT 657
G + + Q +Y+ M K + D
Sbjct: 341 GKIEKASQ---IYKIMKKENVEIPDV 363
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 187/469 (39%), Gaps = 85/469 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + K R + A Y+ +PN+ +ID G+C G K+ IY
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALID--GLCKAGKIEKASQIY 350
Query: 280 EDLRSQNVTL-----------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ ++ +NV + N++ + +L++ A+ +K ++ K+M G
Sbjct: 351 KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ Y+ L+ CC AG AQE++ + LE +V+TYS+++ K
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTM--LECG--YDPNVYTYSSLIDRLFKDKRLD 466
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ALKV ML PN + ++ +I+ G ++A L M + GC PN +
Sbjct: 467 LALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV----VTY 522
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
A ++ F ++ R+ + L + + G PNFV
Sbjct: 523 TAMIDG--FGKSGRVEKCLELLQQMSSKG----------------------CAPNFV--- 555
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS-WTILIDA 557
TY +L+ CC+ +A L+ EM+ P H++ + +I+
Sbjct: 556 ----------------TYRVLINHCCSTGLLDEAHKLLEEMKQT-YWPRHVAGYRKVIE- 597
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI--Q 615
G + +L + + E+ P Y I +++ RL+ A L EE+ +
Sbjct: 598 -GFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSA 656
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
N +ITL+ S H+ + +Y DM G + L LI+
Sbjct: 657 ANQNIHITLIENLSL---AHKADKAFELYADMISRGSIPELSILVHLIK 702
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L +G++E + +++++ + + ++D FR+V N+P+V Y +V
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV---FTYGALVDG----L 389
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
C + + RDL+ ++ PN + +ID C G +++ ++ +
Sbjct: 390 CK-AYQVKEARDLLKSMSVEGCE------PNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
N+Y ++SL++ D L L+V M + ++ Y ++ C G T
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT-- 500
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E Y + +E KG +V TY+ ++ F + + L++ + M S G PN +T+
Sbjct: 501 -DEAYKLMVMMEEKGC-NPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558
Query: 403 SLINACANAGLVEQAMHLFEEMLQ 426
LIN C + GL+++A L EEM Q
Sbjct: 559 VLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P T Y ++ C + + + MR PN +++ IL+ C +
Sbjct: 38 FVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCK 97
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+IL +M +G P + + + RS A+ L ++M QP V Y L+
Sbjct: 98 RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILI 154
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 189/436 (43%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + ++ F G+K D + Y SP++ + + +D G+ K RA+
Sbjct: 518 VVYTSLIQNFFKCGRKED---GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E++++Q + ++ ++ L++ V A + T +++ M++ G+ D+ +YN ++ C
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A ++ E+K KG L+ V TY ++V A A + E+ S GV
Sbjct: 635 SGKVDKAYQLLEEMK---TKG-LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PNS N LL A V+A + D A F
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ NM K P
Sbjct: 751 Q-----------------------NM------------------------KNLKCSPNAM 763
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+I++ C + + EM+ GL PN+I++T +I +GNV A +
Sbjct: 764 TYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRF 823
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PD Y I+ + + A+ +FEE + + N T + LL A + L
Sbjct: 824 KASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCL 883
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV ++M K+
Sbjct: 884 EQAAIVGAVLREMAKS 899
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 203/466 (43%), Gaps = 39/466 (8%)
Query: 203 NKPDVNLAIRYAC--IVPRADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
N+PD L + + I A++ LF VR F ++ + +AL D K + + ++ +
Sbjct: 217 NRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLY 276
Query: 260 RTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQK 317
ID G G + + ++++Q + + + +L+ V A L +E+++ +
Sbjct: 277 NVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDL 336
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ + +YN ++ AG E Y ++ + KG + V Y+ I+
Sbjct: 337 NRSVPCVYAYNTMIMGYGSAGKF---DEAYSLLERQKRKGCIP-SVIAYNCILTCLGRKG 392
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL++ ++M PN T++ LI+ AG +E A+ + + M +AG PN N
Sbjct: 393 KVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVN 451
Query: 438 ILLQACVEACQFDRAFRLFRSWTL------SKTQVAL--GEDYDGNTDRISNMEHK--DK 487
I++ +A + D A +F S+T +L G G D ++ K D
Sbjct: 452 IMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN-ILMKACCTDYY---------------- 530
I N V S +F K + Y ++ + C D
Sbjct: 512 DQIPNV--VVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ +AL E++ GL P+ S++ILI +G ++ M+E G+ DV+AY T I
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+S ++ +A+ L EEMK +QP +VTY +++ ++ L E
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE 675
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 173/429 (40%), Gaps = 59/429 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+G A + K+ P++ I+ G G ++ I++++R Q+ N
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPN 411
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N L+++ A +L+ L+V M++ G+ ++ + NI++ C A A I+
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H V D T+ +++ A + E ML + PN + ++SLI
Sbjct: 472 GLDH----KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G E +++EM+ GC P+ N + +A + ++ LF
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF------------ 575
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
E Q + P +Y+IL+
Sbjct: 576 --------------EEIKAQGLV---------------------PDVRSYSILIHGLVKA 600
Query: 529 YY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L EM+ GL + +++ +ID SG V+ A Q+L+ M+ G+ P VV Y
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + + RL +A+ LFEE K + N+V Y +L+ +G + + + + ++
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG---FGKVGRIDEAYLILEE 717
Query: 647 MWKAGYKAN 655
+ + G N
Sbjct: 718 LMQKGLTPN 726
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 201/476 (42%), Gaps = 43/476 (9%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
+ DE + +++ K + I Y CI L C G+K + ALR +D ++
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCI------LTC-----LGRKGKVEEALRIHDEMRQ 406
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
++PN+ +ID+ G+ + + + ++ + NI N +++ A L
Sbjct: 407 D-AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ + D ++ L+ G A +Y K L++ + +V Y+
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE--KMLDSDQIP--NVVVYT 521
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++++ F + K+ ++M+ G +P+ + +S ++ AG VE+ LFEE+
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDR- 478
G P+ + +IL+ V+A ++LF L+ V G G D+
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 479 ---ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF----KPTTTTYNILMKACCTDY 529
+ M+ K Q T V + + D+ + K N+++ + D
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Query: 530 Y-------RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ ++ E+ GL+PN +W L+DA + ++ A + M+ SP+
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPN 761
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ Y+ I ++ +AF ++EM+ ++PN +TY T++ ++ G++ E +
Sbjct: 762 AMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 157/378 (41%), Gaps = 40/378 (10%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V +H LK V + M+K ++Y L+ A A ++ +++ + +
Sbjct: 179 VKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEA-- 236
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V ++T+V+VFA AL + ++M S T + + ++ I+ G V+ A
Sbjct: 237 --NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT--------QVALGED 471
F EM G P+ L+ +A + D A LF L+++ + +G
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G D ++ + K R P+ YN ++ C +
Sbjct: 355 SAGKFDEAYSLLERQK--------------------RKGCIPSVIAYNCIL-TCLGRKGK 393
Query: 532 VKALM---NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
V+ + +EMR +PN ++ ILID +G +E AL++ M+E G+ P+++
Sbjct: 394 VEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++++L +A S+F + H P+ T+ +L+ R G V ++Y+ M
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG---RVDDAYSLYEKML 509
Query: 649 KAGYKANDTYLKELIEEW 666
+ N LI+ +
Sbjct: 510 DSDQIPNVVVYTSLIQNF 527
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 171/429 (39%), Gaps = 59/429 (13%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K L A + +K P T+I ++ ++
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+++F +L+ V A + + L + M+ AD+ YN+ + G +A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + E+K A+G++ DV TY+T++ V A+ A+++ E++ P ++++
Sbjct: 294 KFFHEMK---AQGLVPDDV-TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I +AG ++A L E + GC P +++ C+ C L R K
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIP-----SVIAYNCILTC-------LGRK---GKV 394
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ AL RI + +D P TTYNIL+
Sbjct: 395 EEAL---------RIHDEMRQDAA------------------------PNLTTYNILIDM 421
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C AL + M+ GL PN ++ I+ID + ++ A I + SPD
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ + I R R+ A+SL+E+M PN+V Y +L++ + G + +
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK--- 538
Query: 643 VYQDMWKAG 651
+Y++M G
Sbjct: 539 IYKEMVHRG 547
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 41/266 (15%)
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-LGEDY 472
VE+A+++F+EM Q +++ + AF+ FR W KTQ A E Y
Sbjct: 87 VEEALNVFDEMSQP---------EVIVGVMKRLKDVNVAFQYFR-WVERKTQQAHCPEVY 136
Query: 473 DG---------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ N D + + + + N V +SF K K
Sbjct: 137 NAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAF-------- 188
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++ MR P ++T LI A + + L + M+E G +V
Sbjct: 189 ----------GVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANV 238
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+TT ++V R R+ A SL +EMK +LV Y + +G + +V
Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDC---FGKVGKVDMAWKF 295
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEG 669
+ +M G +D LI C+
Sbjct: 296 FHEMKAQGLVPDDVTYTTLIGVLCKA 321
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 209/479 (43%), Gaps = 59/479 (12%)
Query: 289 LNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L+ + +N L+NV + + LK V M G+ D+ ++NIL+KA C A +I
Sbjct: 174 LDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRA------HQI 227
Query: 347 YGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ +E G L D T++T+++ F + AL+++E M++AG + +T + L
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
++ G +E+ + +EM G P+ N L+ A +
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL-------- 339
Query: 465 QVALGEDYDGNTDRISNM--------EHKDKQSITN-------TPNFVP-NSHYSSFDKR 508
V L E +D + +++ E ++ I N +PN V N+ S+ K
Sbjct: 340 DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKE 399
Query: 509 FSFK---------------PTTTTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNHISW 551
+ P T+N L++ C T+ +R+ L EM+T G P+ ++
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTY 459
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+LID+ G +E AL +LK M G S +VV Y T I ++KR+++A +F+EM+
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL 519
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
I N+VTY TL+ + + E Q + M G K + L+ +C
Sbjct: 520 QGISRNVVTYNTLIDGLCKNRRVEEAAQLM---DQMLMEGLKPDKFTYNSLLTYFCRA-- 574
Query: 672 QDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLA 730
+ ++ +N P S+ + + L K+ LA L L V+ + +VLA
Sbjct: 575 -GDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL--LRTVQLKGMVLA 630
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 149/694 (21%), Positives = 272/694 (39%), Gaps = 88/694 (12%)
Query: 41 ASSSSLSSIPTVHSSQTALLSTVRRDL--SSRNDYYADMASKLAKDGRLEEFAMIVESVV 98
S S+LS PT Q +R L S D D+ +K ++I E V+
Sbjct: 53 PSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVL 112
Query: 99 VSEGNVSKFASMLSL--EMVASGIVKSIREGRI-------------DCVVGVLKKLNELG 143
G F SM + EM +G IR G D V V+ + E
Sbjct: 113 RKLGKDGSFGSMRRVLQEMKHTGC--EIRRGTFLILIESYAKFELFDEAVAVVDIMEEEF 170
Query: 144 VAPLELF----------DGSGFKLLKNECQRLLDSG---EVEMFVGLMEVL---EEFRLP 187
L+ F DG+ KL++ R++ G +V F L++ L + R
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230
Query: 188 VKELDEE------------FRIVQLCVNKPDVNLAIR-----YACIVPRADILFCNFVRE 230
+ ++E ++Q + + ++N A+R A P +++ V
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
+ K+ + L D P+ + ++++ G+C G + I + + +
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN--GLCRIGHVKHALEILDVMLQEGFD 348
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+I+ +NSL+ +++ +E+ M + +YN L+ C A E+
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ L +KG+L DV T++++++ ++A+++ E+M + G P+ T++ LI+
Sbjct: 409 ---ARVLTSKGILP-DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SK 463
+ + G +E+A+ L +EM +GC N N L+ + + + A +F L S+
Sbjct: 465 SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR 524
Query: 464 TQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V DG R+ Q + KP TYN L
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMDQMLME-----------------GLKPDKFTYNSL 567
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D + ++ M + G P+ +++ LI +G VE A ++L+ ++ GM
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y IK R KR +A LF EM P+ VTY + R G + +
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG--PIGE 685
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
+ +M G+ + + L E C ++D
Sbjct: 686 AVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMED 719
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 188/426 (44%), Gaps = 41/426 (9%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLF-----LKLNRTEAAWVL--YAEMFRLRIKSSVYTFN 225
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G H+E GV K ++ TY+TIV + + + A +
Sbjct: 226 IMINVLCKEGKLKKAKDFVG---HMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTT 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + P++ T+ SLI+ G +E+A +FEEM+Q G P++ N L+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDG---------NTDR----ISNMEHKDKQSITNTPN 495
D A ++ L K Y+ TD I ++ K T N
Sbjct: 342 LDMA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 496 FVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ N + + + +F KPT TY L+ +A L ++ +
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I + LID + NV+GA ++LK M + PD V + T ++ R ++++A
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF+EMK I+P+ +++ TL+ SR G +++ V +M G+ L
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRG---DIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Query: 663 IEEWCE 668
++ C+
Sbjct: 578 VQGLCK 583
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 157/369 (42%), Gaps = 57/369 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G ++ I+E++ + + + ++N+L++ N +L M K G+
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M++YN L+ A + T A+ + +K ++ KG+ D TY+ ++ + +
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECM---IKEIQEKGI-SPDAITYNILINGYCRCANAK 413
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + ++ML++G+ P T++SL++ + +++A LF+++ G P++ N L+
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AF L + D D
Sbjct: 474 DGHCSNSNVKGAFELLK-------------DMD--------------------------- 493
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
R P T+N +M+ C + + L +EM+ G+ P+HIS+ LI
Sbjct: 494 -------RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+++ A ++ M + G +P V+ Y ++ +++ A L +EM + P+
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Query: 619 VTYITLLRA 627
TY TL+
Sbjct: 607 TTYFTLIEG 615
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 129/322 (40%), Gaps = 39/322 (12%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++I + LI +C + ++A F M + G P + CN LL ++ + + A+ L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 457 RSWTLSKTQVALGEDYDGN---------------TDRISNMEHKDKQSITNTPNFVPNSH 501
+ + ++ Y N D + +ME + T N + + +
Sbjct: 210 AEMFRLRIKSSV---YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266
Query: 502 YSSFD-----------KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
SS KR +P + TY L+ C +A + EM GL P+
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LID GN++ A M + G+SP + Y + I +R +A + +E
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ I P+ +TY L+ R + ++ ++ +M +G K L+
Sbjct: 387 IQEKGISPDAITYNILINGYCRCAN---AKKAFLLHDEMLASGIKPTKKTYTSLLH---- 439
Query: 669 GVIQDKNQNQGEVTLCRRTNSQ 690
V+ KN+ + L ++ S+
Sbjct: 440 -VLSKKNRMKEADDLFKKITSE 460
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P+ I T+ID G C G+ + A +++ + ++ + +NSL++ + + T E
Sbjct: 324 PSAVIYNTLID--GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR-TDEA 380
Query: 311 --VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV------------------ 350
+ K +Q+ G+ D +YNIL+ C N A ++ E+
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 351 --------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
K + ++GVL D ++ ++ + A ++ +DM V P
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLP-DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T+++++ G VE+A LF+EM + G +P+ N L+ AFR+
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV- 558
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + +T F PT
Sbjct: 559 ------------------------------RNEMLDT----------------GFNPTVL 572
Query: 517 TYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDA 557
TYN L++ C + + L+ EM + G++P+ ++ LI+
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 41/443 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L + + F K D AL + +P +I G G ++ AI+E+
Sbjct: 282 LLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEE 341
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + I FN+L+ A LK + M+K G+ D +Y +L+ A G
Sbjct: 342 MKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGR 401
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA+ V + + F +S I+ + D WQ +V +M ++ V P+
Sbjct: 402 WESARHL---LKQMEARNV-QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRH 457
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ ++ AM ++ ML G EP+ N L+ + DRA LF
Sbjct: 458 FYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEM 517
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHYSSFDKRFSFKPTT 515
+ + Y+ + + E D+ I + +PN
Sbjct: 518 Q-ERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN---------------V 561
Query: 516 TTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TY L+ D Y N+ M++ GL P+ + LI+A G E A+
Sbjct: 562 VTYTTLV-----DIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAV 616
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++M DG+ P ++A + I +R +AFS+ + MK ++P++VTY TL++A
Sbjct: 617 NAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKAL 676
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R +V AVY++M +G
Sbjct: 677 IRVDKFDKVP---AVYEEMILSG 696
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 172/398 (43%), Gaps = 29/398 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+YE++ S + L+ + N ++ A D L +Q G+ +++ ++ A
Sbjct: 268 LYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALG 327
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G T A+ I+ E+K +G LK + ++ ++K +A + A + +M +G++
Sbjct: 328 NHGRTEEAEAIFEEMK----EGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLS 383
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+ L++A AN G E A HL ++M +PN+ + +L + + ++ + F +
Sbjct: 384 PDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEV 443
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFS--FK 512
R S + DR H I F H ++D+ S +
Sbjct: 444 LREMKNSNVK----------PDR-----HFYNVMIDTFGKFNCLDHAMETYDRMLSEGIE 488
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+N L+ Y R L EM+ G P ++ I+I++ G + +
Sbjct: 489 PDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKIL 548
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M+ G+ P+VV YTT + + S R A E MK ++P+ Y L+ A ++
Sbjct: 549 LGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQ 608
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G +Q + Y+ M G + + L LI + E
Sbjct: 609 RGL---SEQAVNAYRVMISDGLRPSLLALNSLINAFGE 643
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ +L P Y +I+ G + + + + ++SQ + N+ + +L+++ H +F
Sbjct: 520 RGYLPCPTTY--NIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRF 577
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++ + M+ G+ YN L+ A G L+++ + + + G L+ +
Sbjct: 578 NDAIDCLEAMKSAGLKPSATMYNALINAFAQRG---LSEQAVNAYRVMISDG-LRPSLLA 633
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++++ F + + A + + M V P+ +T+++L+ A ++ ++EEM+
Sbjct: 634 LNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMI 693
Query: 426 QAGCEPNSQCCNILLQA 442
+GC P+ + +L A
Sbjct: 694 LSGCTPDGKARAMLRSA 710
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 75/471 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ + L E Q ++ M + N LI +C+ G + D
Sbjct: 552 MIDGLCKQSRLDEATQ---MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 27/454 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G+ + L ++Q+M +G + ++ ++
Sbjct: 628 KVGN---INGALDIFQEMISSGVYPDTITIRNML 658
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 28/317 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 475 --NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S + K + + +PN Y+ ++ + C D +
Sbjct: 230 CKKGDTVSALNLLRK--MEEVSHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V+ + +A L++EM I PN +TY +++ + L + ++ M
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH---MFYLMATK 389
Query: 651 GYKANDTYLKELIEEWC 667
G N LI+ +C
Sbjct: 390 GCSPNLITFNTLIDGYC 406
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 168/398 (42%), Gaps = 48/398 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-------- 481
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 482 ------MEHKDKQSITNTPNFVPNS-HYSS-----------------FDKRFS--FKPTT 515
+E ++ VP++ YSS FD S F P
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 516 TTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ L+ C RV L EM G+ N I++ LI GN+ GAL I +
Sbjct: 582 VTFTTLINGYCK-AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M G+ PD + + + LK+A ++ E+++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN+VT+ TL+ R G + E +A+ M + G + +++ C+
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDRMMEDGLQPTQITYGTIVDGMCK 231
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 75/471 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ + L E Q ++ M + N LI +C+ G + D
Sbjct: 552 MIDGLCKQSRLDEATQ---MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 27/454 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G+ + L ++Q+M +G + ++ ++
Sbjct: 628 KVGN---INGALDIFQEMISSGVYPDTITIRNML 658
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 28/317 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 475 --NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S + K + + +PN Y+ ++ + C D +
Sbjct: 230 CKKGDTVSALNLLRK--MEEVSHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V+ + +A L++EM I PN +TY +++ + L + ++ M
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH---MFYLMATK 389
Query: 651 GYKANDTYLKELIEEWC 667
G N LI+ +C
Sbjct: 390 GCSPNLITFNTLIDGYC 406
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 168/398 (42%), Gaps = 48/398 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-------- 481
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 482 ------MEHKDKQSITNTPNFVPNS-HYSS-----------------FDKRFS--FKPTT 515
+E ++ VP++ YSS FD S F P
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 516 TTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ L+ C RV L EM G+ N I++ LI GN+ GAL I +
Sbjct: 582 VTFTTLINGYCK-AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M G+ PD + + + LK+A ++ E+++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN+VT+ TL+ R G + E +A+ M + G + +++ C+
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDRMMEDGLQPTQITYGTIVDGMCK 231
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 39/341 (11%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K DV TY+ I+ A W+ A+ +
Sbjct: 154 YNMMIRLHARHNRTDQARGLFFEMQEWRCKP----DVETYNAIINAHGRAGQWRWAMNIM 209
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DML A + P+ T+++LINAC ++G ++A+++ ++M + G P+ NI+L A
Sbjct: 210 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSG 269
Query: 447 CQFDRA---FRLFRSWTLSKTQVALG---------EDYDGNTDRISNMEHKDKQSITNTP 494
Q+ +A F L + + L YD + ++M K + TP
Sbjct: 270 AQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSEC---TP 326
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ V T T I + + C +A N M GL PN +S+ L
Sbjct: 327 DVV-----------------TFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNAL 369
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G A ++++G PD+V+YT+ + RS++ +A +F+ MK ++
Sbjct: 370 IGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKL 429
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+PNLV+Y L+ A YGS + + + ++M + G + N
Sbjct: 430 KPNLVSYNALIDA---YGSNGLLADAIKILREMEQEGIQPN 467
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 174/401 (43%), Gaps = 31/401 (7%)
Query: 272 YMKSRAIYEDLRSQN--VTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
Y K+ I+ +R + T ++ F S++++ + ++ + M G+ ++ SY
Sbjct: 307 YDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSY 366
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ A G A + E+K + + D+ +Y++++ + ++ A ++ +
Sbjct: 367 NALIGAYAARGMDNEAHLFFNEIK----QNGFRPDIVSYTSLLNAYGRSQKPHKARQIFD 422
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC---V 444
M + PN +++++LI+A + GL+ A+ + EM Q G +PN LL AC
Sbjct: 423 RMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCS 482
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ D + VA Y+ N+ DK Y S
Sbjct: 483 RKVKIDTVLTAAEMRGIKLNTVA----YNAAIGSCMNVGEYDKAI----------GLYKS 528
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ K + TY +L+ CC + Y + M E+ + L + ++ I A G
Sbjct: 529 MRKK-KIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQG 587
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A +M+ G PDVV YT + ++ ++A++LFEEM+ I+ + +
Sbjct: 588 QIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACA 647
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L+R+ ++ G V L++ + M + +DT E++
Sbjct: 648 ALMRSFNKGGQPGRV---LSLAESMREKEIPFSDTIFFEMV 685
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 169/398 (42%), Gaps = 36/398 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 219 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSY 278
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ A EI+ ++ E K DV T+++I+
Sbjct: 279 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMR--EKKSECTPDVVTFTSIIH 336
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + M++ G+ PN +++++LI A A G+ +A F E+ Q G P
Sbjct: 337 LYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRP 396
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDYDGN---TDRISNM 482
+ LL A + + +A ++F +K + AL + Y N D I +
Sbjct: 397 DIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKIL 456
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+++ I +P + L+ AC C+ ++ ++
Sbjct: 457 REMEQEGI---------------------QPNVVSICTLLAACGRCSRKVKIDTVLTAAE 495
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ N +++ I +C G + A+ + K MR+ + D V YT I C + +
Sbjct: 496 MRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYG 555
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+A S EE+ H ++ + Y + + A S+ G + E +
Sbjct: 556 EALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAE 593
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 46/280 (16%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID------------- 264
R DI+ + + + +G+ + A + +D K++ PN+ +ID
Sbjct: 395 RPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIK 454
Query: 265 ----------------------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLM 298
CG C +K + + + LN +N S M
Sbjct: 455 ILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCM 514
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
NV +D L YK+M+K + D +Y +L+ CC A E+ HL+
Sbjct: 515 NVGEYDKAIGL--YKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLK---- 568
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L L YS+ + ++ A M S+G P+ +T++++++A A E+A
Sbjct: 569 LPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAY 628
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
LFEEM + + ++ C L+++ + Q R L S
Sbjct: 629 ALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAES 668
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 75/471 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKIGDTVSALDLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ + L E Q ++ M + N LI +C+ G + D
Sbjct: 552 MIDGLCKQSRLDEATQ---MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 181/416 (43%), Gaps = 51/416 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG--------------- 506
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ P+
Sbjct: 507 ---------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +ID ++ A Q+ M SP+VV +TT I ++ R+ LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM I N +TYITL+ + G+ + L ++Q+M +G + ++ ++
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGN---INGALDIFQEMISSGVYPDTITIRNML 658
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 28/317 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN 475
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 476 T---DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S ++ K + + +PN Y+ ++ + C D +
Sbjct: 230 CKIGDTVSALDLLRK--MEEISHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V+ + +A L++EM I PN +TY +++ + L + ++ M
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH---MFYLMATK 389
Query: 651 GYKANDTYLKELIEEWC 667
G N LI+ +C
Sbjct: 390 GCSPNLITFNTLIDGYC 406
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN+VT+ TL+ R G + E +A+ M + G + +++ C+
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDRMMEDGLQPTQITYGTIVDGMCK 231
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 75/471 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ + L E Q ++ M + N LI +C+ G + D
Sbjct: 552 MIDGLCKQSRLDEATQ---MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 27/454 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G+ + L ++Q+M +G + ++ ++
Sbjct: 628 KVGN---INGALDIFQEMISSGVYPDTITIRNML 658
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 160/394 (40%), Gaps = 34/394 (8%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTF 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ AL + M PN +T+++L+N G + +A+ L + M++
Sbjct: 153 TTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHK 485
G +P ++ + A L R + Y D + + H
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 486 DKQSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILM 522
D Q++ P+ F NS F R+S P TYN L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + ++ + L +EM G+ PN I+++ +ID ++ A + +M G S
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+++ + T I +KR+ L EM + + TY TL+ G L+
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA--- 449
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
L + Q+M +G + L++ C+ G ++D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 168/398 (42%), Gaps = 48/398 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-------- 481
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 482 ------MEHKDKQSITNTPNFVPNS-HYSS-----------------FDKRFS--FKPTT 515
+E ++ VP++ YSS FD S F P
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 516 TTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ L+ C RV L EM G+ N I++ LI GN+ GAL I +
Sbjct: 582 VTFTTLINGYCK-AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M G+ PD + + + LK+A ++ E+++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 75/471 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ + L E Q ++ M + N LI +C+ G + D
Sbjct: 552 MIDGLCKQSRLDEATQ---MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 27/454 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G+ + L ++Q+M +G + ++ ++
Sbjct: 628 KVGN---INGALDIFQEMISSGVYPDTITIRNML 658
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 159/392 (40%), Gaps = 34/392 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T++T
Sbjct: 99 ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTFTT 154
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ AL M PN +T+++L+N G + +A+ L + M++ G
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHKDK 487
+P ++ + A L R + Y D + + H D
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 488 QSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILMKA 524
Q++ P+ F NS F R+S P TYN L+ A
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ ++ + L +EM G+ PN I+++ +ID ++ A + +M G SP+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++ + T I +KR+ L EM + + TY TL+ G L+ L
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA---LD 451
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ Q+M +G + L++ C+ G ++D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 168/398 (42%), Gaps = 48/398 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-------- 481
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 482 ------MEHKDKQSITNTPNFVPNS-HYSS-----------------FDKRFS--FKPTT 515
+E ++ VP++ YSS FD S F P
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 516 TTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ L+ C RV L EM G+ N I++ LI GN+ GAL I +
Sbjct: 582 VTFTTLINGYCK-AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M G+ PD + + + LK+A ++ E+++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 19/274 (6%)
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + K + A+ + DML + P+ + + L+ + + L+++M + +
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NIL++ + A F T ++ L D T + + +D+ ++
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKIT----KLGLHPDVVTFTTLLHGLCVEDR--VSE 167
Query: 493 TPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+F F + F + +P T+ LM C + V+A L++ M GL P
Sbjct: 168 ALDF--------FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 549 ISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ ++D G+ AL +L+ M E + P+VV Y+ I + R A +LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM+ I P+L TY +++ G + +Q L
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 164/382 (42%), Gaps = 40/382 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M LG+ + SY+I L AC G QE ++ +E +KLDV YS + A
Sbjct: 1 MPGLGIRPSVESYSIGLTACAKGGRW---QEALVLLREMEEDDEIKLDVVAYSAAITACA 57
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ WQ A+ + DM + GV PN I+ ++ I A AG + A+ + M +AG P++
Sbjct: 58 NGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAI 117
Query: 435 CCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDR-ISNME 483
N + A A Q ++A L T + A+ G + ++ ++
Sbjct: 118 SYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVK 177
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
H +T P + TYN L+ AC +AL + M+
Sbjct: 178 HMSLAGVT---------------------PDSITYNSLIVACGKGGQWKQALSVLKGMKK 216
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GLS + I ++ I ACG +G E ++ +L + G++PD+VAYT A+ C + + +
Sbjct: 217 QGLSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPDLVAYTAAVTACADANQRDK 276
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L +EM I+P+ + +L+ A G + Q + + + M K G N
Sbjct: 277 ATFLLKEMLSAGIRPDAAAFTSLIAALGHDG---QWTQAVEILESMPKMGAPRNAMVYNA 333
Query: 662 LIEEWCEGVIQDKNQNQGEVTL 683
LI W + + G + L
Sbjct: 334 LITSWANAEVAKGEEEGGALLL 355
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 124/286 (43%), Gaps = 21/286 (7%)
Query: 190 ELDEEFRI--------VQLCVNKPDVNLAIRYACIVP----RADILFCNF-VREFGKKRD 236
E D+E ++ + C N A+ +P R +++ CN ++ +G+
Sbjct: 37 EEDDEIKLDVVAYSAAITACANGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQ 96
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
AL K SP+ T I G+ G +++ + ++ + + +NS
Sbjct: 97 WQHALSILRGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNS 156
Query: 297 LMNV----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ + + + K+M GV D +YN L+ AC G A + +K
Sbjct: 157 AIAAIARGGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSV---LKG 213
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ +G L D+ YS + +A W+ ++ + + S G+TP+ + +++ + ACA+A
Sbjct: 214 MKKQG-LSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPDLVAYTAAVTACADAN 272
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++A L +EML AG P++ L+ A Q+ +A + S
Sbjct: 273 QRDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILES 318
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADM 324
G G + ++ A+ + + VT + +NSL+ K L V K M+K G+ D+
Sbjct: 164 GGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDI 223
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
Y+ + AC AG + + E K L + D+ Y+ V ADA A
Sbjct: 224 IGYSAAISACGEAGQWEYSVGLLAEAKSLG----ITPDLVAYTAAVTACADANQRDKATF 279
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ ++MLSAG+ P+ ++SLI A + G QA+ + E M + G N+ N L+ +
Sbjct: 280 LLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNALITSWA 339
Query: 445 EA 446
A
Sbjct: 340 NA 341
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 193/401 (48%), Gaps = 36/401 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV-YKNMQKLGVM 321
G+C G ++R + + + NV L FN+L+N V+ L V +++M +G
Sbjct: 349 GLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCG 404
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++ F +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILIDRFCKEGRLEE 460
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++M G+ N + ++ LI+A V+ A+++F +M GC+P+ N L+
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPN 499
+ +F+ A L++ L E NT + + H + ++ V
Sbjct: 521 GLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRGAMQEALKLVN- 571
Query: 500 SHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
D F P TYN L+KA C + + AL +M + GL+PN+IS ILI+
Sbjct: 572 ------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +LF++++ I P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ +TY TL+ + G + L+ D +G+ N+
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLSRGVD---SGFIPNEV 723
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 33/365 (9%)
Query: 326 SYNILLKACCLAGNT--VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN++L LAGN V+ Y + +KG+ V+T+ ++K A
Sbjct: 202 SYNVVLDVL-LAGNCPKVVPNVFY----EMLSKGI-SPTVYTFGVVMKALCLVNEVDSAC 255
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +DM G PN I + +LI+A + G V + + L EEML GC P+ N +
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315
Query: 444 VEACQFDRAFRL-----FRSWTLSKTQVAL---GEDYDGNTDRISNMEHKDKQSITNTPN 495
+ + A +L R +T + + G G D + +K N
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFN 375
Query: 496 FVPNSHYSS--FDK----------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+ N + S D+ P TYN L+ C Y V A LMNEM+
Sbjct: 376 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++TILID G +E A +L M G++ + V Y I + ++++
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 495
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A ++F +M +P++ T+ +L+ + +++ ++ L +YQDM G AN
Sbjct: 496 ALNMFGDMSSKGCKPDIFTFNSLIFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNT 552
Query: 662 LIEEW 666
LI +
Sbjct: 553 LIHAF 557
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK---FEEALGLY 535
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 536 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R L
Sbjct: 595 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM----IHRGLTP 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD 528
D I+ + + + FDK P TYN L+ C +
Sbjct: 651 DIVTYNSLINGLCKTGRAQ----------EALNLFDKLQVEGICPDAITYNTLISWHCKE 700
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILI 555
+ L++ G PN ++W IL+
Sbjct: 701 GMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 142/354 (40%), Gaps = 28/354 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y +L+ C G A+ + +V + +V ++T++ +
Sbjct: 335 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP--------NVVLFNTLINGYVSRGR 386
Query: 379 WQMALKV-KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A V E MLS G P+ T+++LI G + A L EM GCEPN
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNF 496
IL+ + + + A + +S +AL + G IS + +K Q N
Sbjct: 447 ILIDRFCKEGRLEEARNVLDE--MSGKGLAL--NAVGYNCLISALCKDEKVQDALNM--- 499
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ + KP T+N L+ C + L +M G+ N I++ L
Sbjct: 500 -----FGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G ++ AL+++ M G D + Y IK R+ +++ +LFE+M +
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PN ++ L+ R G+ +Q L +DM G + LI C+
Sbjct: 614 NPNNISCNILINGLCRTGN---IQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 137/342 (40%), Gaps = 57/342 (16%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ V ++ V +MLS G++P T+ ++ A V+ A L ++M
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNM 482
+ GC PN+ I+ Q + A + R+ L + + +G D NT D I +
Sbjct: 262 TRHGCVPNA----IVYQTLIHA--LSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACC----TDYYRV---- 532
+ I V D+ F P + TY +LM C D R+
Sbjct: 316 CKMLR--IHEAAKLV--------DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 365
Query: 533 -------------------------KALMNE-MRTVGLSPNHISWTILIDACGGSGNVEG 566
KA+M+E M +VG P+ ++ LI G +
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +++ M+ G P+V+ YT I + RL++A ++ +EM + N V Y L+
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
A + +VQ L ++ DM G K + LI C+
Sbjct: 486 ALCKD---EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ K A++ED+ S+ + N N L+N +++ LE ++M G+ D+ +Y
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G AQE L+ +G+ D TY+T++ + A +
Sbjct: 656 NSLINGLCKTGR---AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLS 711
Query: 388 DMLSAGVTPNTITWSSLIN 406
+ +G PN +TW L++
Sbjct: 712 RGVDSGFIPNEVTWYILVS 730
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 21/277 (7%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ KG +L+V Y+ ++++ A+ W + ++M+S G+TP T+ +LI+ + G
Sbjct: 186 LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGG 245
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L E+A+H + M + G EP+ +++Q +A +F +A + F++W+L KT L ++
Sbjct: 246 LTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKT---LKDEG 302
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
+ ++ Q ++ N+ ++ K + + T+ +++
Sbjct: 303 KTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-------- 354
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G+ PN +++ +I CG G +E A +++ M E PD Y I +
Sbjct: 355 ----------GIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 404
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +A S F++MK +++P+LV+Y TLL A S
Sbjct: 405 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFS 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 22/361 (6%)
Query: 280 EDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E +V L+ Y +N+L++ A L+ + + M + G++ + ++N ++ C
Sbjct: 314 ESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNH 373
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + +++ L D TY+ ++ + A A + M A + P+
Sbjct: 374 GQLEEAASLMQKMEELRCPP----DTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPD 429
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++ +L+ A + LV +A L EM + G E + + L + +EA +++ FR
Sbjct: 430 LVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFR 489
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ L + E Y N D H + + + + S K +
Sbjct: 490 RFHLEGNMSS--ECYSANIDAYGERGH------------ILEAEKAFLCCKESRKLSVLE 535
Query: 518 YNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+++KA Y + L++ M G+ P+ S+ LI + A L M+
Sbjct: 536 FNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ 595
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E + D + Y I ++ +L+ A LF+EM Y +QP++V Y L+ A + G++
Sbjct: 596 ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVR 655
Query: 636 E 636
E
Sbjct: 656 E 656
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 181/438 (41%), Gaps = 32/438 (7%)
Query: 219 RADILFCNF-----VREFGKKRDLVSALRAYDASKKH--LSSPNMYICRTIIDVCGICGD 271
+A+ F N+ +++ GK + + AS+ H LSS Y T+ID G G
Sbjct: 284 KAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSS---YTYNTLIDTYGKAGQ 340
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++ + + + + N FN+++++ N L+ + + M++L D +YNI
Sbjct: 341 LREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNI 400
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ N A + ++K EA+ L+ D+ +Y T++ F+ A + +M
Sbjct: 401 LISLHAKHNNIDRAASYFKKMK--EAR--LEPDLVSYRTLLYAFSIRHLVGEAEILVSEM 456
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ + T S+L AG+++++ F G +S+C + + A E
Sbjct: 457 DERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG-NMSSECYSANIDAYGERGHI 515
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F S+ L + ISN K Q I + N
Sbjct: 516 LEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENH------------- 562
Query: 510 SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P +YN L++ A ++ K + +M+ L + I + +I + G +E A
Sbjct: 563 GVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMA 622
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ K M + PDVV Y I +++A + +++ + N V Y +L++
Sbjct: 623 EGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKL 682
Query: 628 RSRYGSLHEVQQCLAVYQ 645
++ G L E Q+ + Q
Sbjct: 683 YTKVGYLEEAQEAYKMLQ 700
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 62/317 (19%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+ GV+ D SYN L++ LA + + + +K E + L D Y ++ F
Sbjct: 558 SMENHGVLPDKFSYNSLIQ--ILASADLPHKAKFYLMKMQETQ--LVSDCIPYCAVISSF 613
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+MA + ++M+ V P+ + + LINA A+ G V +A++ + AG N+
Sbjct: 614 IKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNA 673
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N L++ + + A ++ L ++V
Sbjct: 674 VIYNSLIKLYTKVGYLEEAQEAYK--MLQASEVG-------------------------- 705
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS------PN 547
P+ + S+ C D Y ++++ + + S N
Sbjct: 706 ----PDVYSSN--------------------CMIDLYSERSMVKQAEEIFESLKRKGDAN 741
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ +++ G ++ A QI++ MRE G+ D+++Y + R K A F+
Sbjct: 742 EFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFK 801
Query: 608 EMKHYQIQPNLVTYITL 624
EM IQP+ T+ +L
Sbjct: 802 EMIEAAIQPDDCTFKSL 818
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 184/436 (42%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D G+ K R I
Sbjct: 494 VVYTSLIRNFFIHGRKED---GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED+RS ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 610
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A EI E+K + ++ V TY IV A A + E+ S G+
Sbjct: 611 SGKVHKAYEILEEMK----EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EEM++ G PN N LL A V+A + + A F
Sbjct: 667 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 726
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P T
Sbjct: 727 QSM-----------------------------------------------KEMKCPPNTY 739
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+IL+ C Y + +M+ GL PN +++T +I GN+ A + +
Sbjct: 740 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 799
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD ++ I+ + R +A+ +FEE + + N+ + I+LL A ++ L
Sbjct: 800 KANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECL 859
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV +++ K+
Sbjct: 860 EQAAIVGAVLREIAKS 875
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 193/471 (40%), Gaps = 35/471 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF VR ++ + AL D K P++ + ID G G+ + + +L
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + + S++ V A L E++ M+ + +YN ++ AG
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ L +G + V ++++I+ + AL + E ++ PN+ T
Sbjct: 336 ---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSST 390
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ G VE+A + +EM A PN NI++ +A + + A+++F S +
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450
Query: 461 --------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF------- 505
++ + G G D + K + N V S +F
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510
Query: 506 DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
D F KP T N M + + + + ++R+ G P+ S++ILI
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+G I M++ G + D AY + +S ++ +A+ + EEMK +Q
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
P + TY ++ ++ L E ++++ G + N LI+ +
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYM---LFEEAKSKGIELNVVLYSSLIDGF 678
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 183/472 (38%), Gaps = 77/472 (16%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 375 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 429
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG- 428
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 430 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 489
Query: 429 ----------------------------------CEPNSQCCNILLQACVEACQFDRAFR 454
C+P+ N + +A + ++
Sbjct: 490 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 549
Query: 455 LF---RSWTL-----SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+F RS+ S + + G G SN+ H KQ
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ----------------- 592
Query: 507 KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
F YN ++ C ++ ++ EM+ + P ++ ++D +
Sbjct: 593 ---GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + + + G+ +VV Y++ I + R+ +A+ + EEM + PN+ T+ +L
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
L A + E+ + L +Q M + N LI C +Q N+
Sbjct: 710 LDALVK---AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR--VQKYNK 756
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 161/371 (43%), Gaps = 56/371 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + MQ++G + + L++A G A + EVK L+ D+ Y+
Sbjct: 198 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK----GSCLEPDIVLYN 253
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ F A MA K ++ + G+ P+ ++++S+I AG + +A LF +M
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P + N ++ A +F+ A++L +R+ +++
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLL--------------------ERL-----RER 348
Query: 488 QSITNTPNFVPNSHYSSFDKRFSF--------------KPTTTTYNILMKACC-----TD 528
I + +F NS + K+ +P ++TYNI++ C +
Sbjct: 349 GCIPSVVSF--NSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 406
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
YR+ ++EM L PN ++ I++D + +E A +I + + G +PD V Y +
Sbjct: 407 AYRI---LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + ++ +A+ LFE+M N V Y +L+R +G + + +++++
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK---IFKELI 520
Query: 649 KAGYKANDTYL 659
+ G K + T L
Sbjct: 521 RRGCKPDLTLL 531
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 170/424 (40%), Gaps = 59/424 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ +C+ + GKK + A R ++ H ++P +Y ++I I G I+
Sbjct: 459 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT--SLIRNFFIHGRKEDGHKIF 516
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L + ++ + N+ M+ A +++ ++++++ G + D+ SY+IL+ A
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 576
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I+ +K +G LD Y+ +V F + A ++ E+M V P
Sbjct: 577 GQARETSNIFHAMKQ---QG-FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 632
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+ ++++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI-- 690
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+E K+ +T P T
Sbjct: 691 ------------------------LEEMMKKGLT---------------------PNVYT 705
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+ A +AL+ M+ + PN +++ILI+ A + M+
Sbjct: 706 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 765
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV YTT I + + A+SLFE K P+ ++ L+ S
Sbjct: 766 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825
Query: 636 EVQQ 639
E Q
Sbjct: 826 EAYQ 829
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R F+P + Y +L+ A +AL + +M+ VG +T L+ A G V
Sbjct: 171 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 230
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL ++ ++ + PD+V Y I ++ + A+ F E+K ++P+ V+Y ++
Sbjct: 231 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290
Query: 625 LRARSRYGSLHEVQQCLA 642
+ + G L E ++ A
Sbjct: 291 IWVLCKAGRLGEAEELFA 308
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR + P ++T+LI A + E AL++L+ M+E G V +TT ++ R +
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 229
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ A +L +E+K ++P++V Y + +G V + ++ G K +D
Sbjct: 230 VADALALVDEVKGSCLEPDIVLYNVCIDC---FGKAGNVDMAWKFFHELKAQGLKPDDVS 286
Query: 659 LKELIEEWCEG 669
+I C+
Sbjct: 287 YTSMIWVLCKA 297
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+E++ GL P+ +S+T +I +G + A ++ M + P AY T I
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 330
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ R + A+ L E ++ P++V++ ++L G +V + L++++ M K
Sbjct: 331 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALSLFEVMKKDAEPN 387
Query: 655 NDTYLKELIEEWCEG 669
+ TY +I+ C G
Sbjct: 388 SSTY-NIIIDMLCLG 401
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 218/506 (43%), Gaps = 58/506 (11%)
Query: 176 GLMEVLEEF--RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-----FCNFV 228
G++ +E R+PV+ L ++ + D+ A R+ + RA + + +FV
Sbjct: 57 GMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFV 116
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC----GICGDYM--KSRAIYEDL 282
+ + A R + L P RT G+CG M ++ A++ +
Sbjct: 117 LGYCRTGLFAHACRLF------LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM 170
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ +V++ +++ A + + + G + ++A YN L+ C G+
Sbjct: 171 WPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDL 230
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA +I+ K +++KG L +V TY+ ++ F + + A+ + M+ AG+ PN +T
Sbjct: 231 ELAIDIF---KGMQSKGCLP-NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVT 286
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LI + G +E A L M G PN C +L+ A + + + A + S
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346
Query: 461 ---LSKTQVALGEDYD-----GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ QV D G D N+ K T FVP++H
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQK-----IITEGFVPDAH----------- 390
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ C + ++A L+N+M G+ N + +TILID + I
Sbjct: 391 ----MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ PDVV YT I+ + R++ A S+ +M + ++PNL TY TL++
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG--- 503
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKAND 656
Y +L V Q + ++M G K ND
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPND 529
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 143/359 (39%), Gaps = 60/359 (16%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--KGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +Y L+ A C AG+ A+ +HL + + L D Y++ V + +
Sbjct: 73 NLHTYTTLINAYCHAGDLPAAK------RHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFA 126
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A ++ M G T+++L+ AG+V +AM +F M GC P+S +I++
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMV 186
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
C RA VAL D G FVPN
Sbjct: 187 HG---LCGAGRA----------GEAVALLTDAMGK-------------------GFVPN- 213
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
YN L+ C+ D + M++ G PN ++T LI
Sbjct: 214 --------------VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG VE A+ + M E G++P+VV YTT I+ L+ AF L M+ + PN
Sbjct: 260 CKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNE 319
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
T + L+ A ++G + E QQ L + + G K N +I+ C+ D N
Sbjct: 320 WTCLVLIDALCKHGRIEEAQQFLG---SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 55/324 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
++ TY+T++ + A A + +L AG+ P++ ++S + GL A LF
Sbjct: 73 NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-WTLSKTQVALGEDYDGNTDRIS 480
M Q GC LLQ A A +F W DG
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWP------------DG------ 174
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
P+SH Y+I++ C AL+ +
Sbjct: 175 ---------------CAPDSH---------------VYSIMVHGLCGAGRAGEAVALLTD 204
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G PN + LID +G++E A+ I K M+ G P+V YT I +S +
Sbjct: 205 AMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGK 264
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+++A L+ M + PN+VTY TL++ + G L + + M G N+
Sbjct: 265 VERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL---EHAFRLLHSMEACGLAPNEWT 321
Query: 659 LKELIEEWCE-GVIQDKNQNQGEV 681
LI+ C+ G I++ Q G +
Sbjct: 322 CLVLIDALCKHGRIEEAQQFLGSL 345
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/460 (20%), Positives = 166/460 (36%), Gaps = 112/460 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+PN + C +ID G +++ L + + +N ++ S+++ KF +
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD-GAH 374
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEV-----------------KH 352
MQK+ G + D Y+ L+ C + A + ++ KH
Sbjct: 375 NLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKH 434
Query: 353 LE--------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
L A +K DV TY+ ++ + + A + M+ GV PN
Sbjct: 435 LREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL 494
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++LI AN GLV QA + M+ GC+PN D ++ +
Sbjct: 495 TTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPN-----------------DESYTVLLG 537
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L K +D D IS + D + + V SS + Y
Sbjct: 538 LLLKKNSY-----HDLVADSISLWKIVDMKVLEELLEEVIKLQCSS---------ASYVY 583
Query: 519 NILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ ++ C + R+ K+ + M++ L+P+ +T +I+ C
Sbjct: 584 DCFIR-CLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC----------------- 625
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
R K LK+A + M P L +Y ++ A GS H
Sbjct: 626 ------------------YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFH 667
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
+ +++ D+ Y ++ K LI +G++Q N
Sbjct: 668 TAK---SIFGDILSKEYNRDEIAWKILI----DGLLQKGN 700
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 175/426 (41%), Gaps = 60/426 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------ 341
N +FNSL++ NA D + ++ K M G +YNI + + C G +
Sbjct: 176 NPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC-GGEELPSPDLL 234
Query: 342 -LAQEIYGE--------------------------------VKHLEAKGVLKLDVFTYST 368
LA+++Y E +K + KG + D TYS
Sbjct: 235 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVP-DTSTYSK 293
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +A + A + ++M S GV P+ T++ LI++ AGL+EQA F+EM G
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C N LL A ++A Q +A +F T++ + + G G +
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
+ K + T + V + Y S P TY L+ C + V A L++
Sbjct: 414 EVYTK----LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDA 469
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + G PNHI + LID G ++ A ++ M + G P V YT+ I + +R
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
L A + +M PN+VTY ++ R G E Q+ L + M + G N
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG---ECQKALKLLSMMEEKGCSPNVVT 586
Query: 659 LKELIE 664
LI+
Sbjct: 587 YTALID 592
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 216/507 (42%), Gaps = 70/507 (13%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNM 256
QL K +N+ ++ C P LF + V + RD AY K+ P
Sbjct: 157 QLGWCKRIINMMMKEGC-NPNPS-LFNSLVHSYCNARDYP---YAYKLLKRMADCGCPPG 211
Query: 257 YICRTII--DVCGICGDYMKS-------RAIYEDLRSQNVTLN-IYVFN---SLMNVNAH 303
Y+ I +CG G+ + S +YE++ + + LN + N L +
Sbjct: 212 YVAYNIFIGSICG--GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ F ++ K M G + D ++Y+ ++ C A A ++ E+K + GV DV
Sbjct: 270 DMAF--QIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV---GV-NPDV 323
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+ ++ F A + A ++M S G + N +T+++L++A A + QA +F
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISN- 481
M+ AGC PN+ + L+ +A + +A ++ + V ++G +TD I+
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 482 ------------MEHK--DKQSITNT-------PN-FVPNSHYSSFDK------------ 507
HK D Q + + PN + ++ F K
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 508 ---RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
+ + PT TY L+ A D A+ +++M +PN +++T +ID G
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL++L +M E G SP+VV YT I +S ++ + LF +M PN VTY
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYR 623
Query: 623 TLLRARSRYGSLHEVQQCLA-VYQDMW 648
L+ G L E L+ + Q W
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQTYW 650
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 49/363 (13%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ +GV D+ +Y IL+ + C AG A+ + E++ + +V TY+ ++
Sbjct: 310 LFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA----NVVTYTALL 365
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--- 427
+ AK A + M+ AG PNTIT+S+L++ AG +++A ++ +++
Sbjct: 366 HAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDN 425
Query: 428 --------GCEPNSQCCNIL-LQACVEACQFDRAFRLFRSWTLSKTQVALGED-----YD 473
G +S N++ A ++ +A ++ + L ++ G + YD
Sbjct: 426 VGSDFYFEGKHTDSIAPNVVTYGALIDG--LCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483
Query: 474 GNTDRISNMEHKDK-QSI---TNTPNFVPNSH-YSSF------DKRF------------- 509
D + D Q + + ++P H Y+S D+R
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES 543
Query: 510 SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
S P TY ++ C + + L++ M G SPN +++T LID G SG V+ +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLS 603
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
LQ+ M G +P+ V Y I C + L +A SL EMK L Y ++++
Sbjct: 604 LQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQG 663
Query: 628 RSR 630
S+
Sbjct: 664 FSK 666
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 158/388 (40%), Gaps = 45/388 (11%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A + V K M + G D + +A C G + +
Sbjct: 43 YNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR-------WSDAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A + A+ M PN +T+ +L+
Sbjct: 96 VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SW 459
+ + M++ GC PN N L+ + A + A++L + ++
Sbjct: 156 KQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAY 215
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF- 509
+ + GE+ + D ++ E ++ + NT NF FD F
Sbjct: 216 NIFIGSICGGEELP-SPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C KA L EM++VG++P+ ++TILID+
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G +E A MR G S +VV YT + +++K+L QA +F M PN +
Sbjct: 335 KAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTI 394
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ + G E+Q+ VY +
Sbjct: 395 TYSALVDGLCKAG---EIQKACEVYTKL 419
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 175/406 (43%), Gaps = 48/406 (11%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
D + S +E + ++ N+ + +L++ AH + E+ M G + Y+
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ C G AQE++ + G L V TY++++ + +A+KV
Sbjct: 484 ALIDGFCKVGKIDNAQEVF---LRMSKCGYLP-TVHTYTSLIDAMFKDRRLDLAMKVLSQ 539
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ + TPN +T++++I+ G ++A+ L M + GC PN L+ ++ +
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY------------DGNTDRISNMEHKDKQSITNTPNF 496
D + +LF + + +Y G D ++ + KQ T P +
Sbjct: 600 VDLSLQLF----IQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ--TYWPKY 653
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ Y S + FS K + L+ E+ + G P + +LID
Sbjct: 654 LQG--YCSVVQGFSKK----------------FIASLGLLEELESHGTVPIAPVYGLLID 695
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+G +E AL++ K M E S ++ + YT+ I+ + +L++AF L+ E+
Sbjct: 696 NFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKG 755
Query: 614 IQPNLVTYITLLRARSRYGSLHE-VQQCLAVYQDMWKAGYKANDTY 658
+ P L ++ L++ + +E +Q C ++ + +++N+++
Sbjct: 756 VVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE--GVNWQSNNSF 799
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K R L A++ + +PN+ +ID G+C G+ K+ + + + + N
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMID--GLCRIGECQKALKLLSMMEEKGCSPN 583
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + +L++ + + +L+++ M G + +Y +L+ CC AG A +
Sbjct: 584 VVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 643
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L+ Y ++V+ F+ K + +L + E++ S G P + LI+
Sbjct: 644 EMKQTYWPKYLQ----GYCSVVQGFS--KKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNI---LLQACVEACQFDRAFRLFRSWT 460
+ AG +E+A+ L +EM++ N ++ L+QA A Q ++AF L+ T
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEIT 752
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 507 KRFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F ++P+ TYN L++ T +RV+ EM G + + A
Sbjct: 32 KDFGYRPSGATYNALVQVLATAGQMDMGFRVQ---KEMSESGFCMDKFTVGCFAQALCKE 88
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G AL +++ RED D V T I + + +A S M+ PN+VTY
Sbjct: 89 GRWSDALVMIE--RED-FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTY 145
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TLL + ++ C + M K G N + L+ +C
Sbjct: 146 RTLLTG---FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYC 188
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 171/406 (42%), Gaps = 54/406 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K DL + + ++ + P++ T+ID GD ++R ++ D+ S+ N+
Sbjct: 49 KSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVV 108
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 109 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ A V +DM++ G PN IT+++L+N
Sbjct: 169 SLR----DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 224
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A +E+A + E M+ G P+ ++L+ A +A + D A L
Sbjct: 225 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA------ 278
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
S TPN P T+NIL+ C
Sbjct: 279 ----------------------SRGCTPNV--------------LVPDKVTFNILIAGAC 302
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++ + AL EM L P+ +++ LID +G VE A IL +M G+ P+VV
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
Y + +S R+++A EEM P+ +TY +L+ A R
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 174/389 (44%), Gaps = 43/389 (11%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG+T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNDLGAG 56
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L +M GC PN ++L+
Sbjct: 57 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLING 116
Query: 443 CVEACQFDRAFRLFRSWTLSKTQV-----ALGEDYDG------NTDRISNMEHKDKQSIT 491
+ + D A L + T V DG + M S+
Sbjct: 117 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176
Query: 492 NTPNFVPNSHY--------------SSFDKRFS--FKPTTTTYNILMKACC--TDYYRVK 533
+P+ V S S FD + + P TYN L+ C R
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV-----VAYTT 588
A++ M G++P+ I++++L+DA + V+ AL++L M G +P+V V +
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ +QA +LFEEM +QP+++T+ L+ + G + + L + M
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL---MG 353
Query: 649 KAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
G N L+ C+ G I++ Q
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQ 382
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 169/419 (40%), Gaps = 78/419 (18%)
Query: 302 AHDLKFTLEVYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A D LE+++ M + GV + +YN ++ C + + E++ E L +G
Sbjct: 14 AGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE---LVERG-HH 69
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+T++ A + A ++ DM S G PN +T+S LIN G +++A L
Sbjct: 70 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129
Query: 421 FEEMLQAGCE--PNSQCCNILLQA------CVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+EM + C+ PN N L EAC+ R+ R S +S V
Sbjct: 130 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVTFSTLI 188
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC--TD 528
DG + D+ S FD + + P TYN L+ C
Sbjct: 189 DG----LCKCGQIDEAC-------------SVFDDMIAGGYVPNVITYNALVNGLCKADK 231
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV----- 583
R A++ M G++P+ I++++L+DA + V+ AL++L M G +P+V
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP--------------------------- 616
V + I ++ +QA +LFEEM +QP
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 617 --------NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
N+VTY L+ + G + E Q L ++M +G + L+ C
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL---EEMVSSGCVPDSITYGSLVYALC 407
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 156/368 (42%), Gaps = 64/368 (17%)
Query: 254 PNMYICRTIIDVCGIC-GDYM-KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
PN+ +++ G+C D M ++ A+ E + + VT ++ ++ L++ A + L
Sbjct: 214 PNVITYNALVN--GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271
Query: 310 EVYKNMQKLG-----VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
E+ M G ++ D ++NIL+ C AGN A ++ E + AK L+ DV
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE---MVAKN-LQPDVM 327
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+ ++ A + A + + M + GV PN +T+++L++ +G +E+A EEM
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +GC P+S L+ A A + D A +L
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL------------------------- 422
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
K F + P T TYNIL+ +A+ + EM
Sbjct: 423 ----------------------KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++ SGN+ G +++L+++ GM PD ++ + RS +L
Sbjct: 461 GHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDV 520
Query: 603 FSLFEEMK 610
++ +E +
Sbjct: 521 KAMIKEFE 528
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 184/463 (39%), Gaps = 46/463 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + K DL A R + PN+ +I+ G+C G ++R +
Sbjct: 73 VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN--GLCKVGRIDEARELI 130
Query: 280 EDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG-----VMADMASYNILLK 332
+++ +S +V NI +NS ++ T E + M+ L V D +++ L+
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLD-GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 189
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A ++ + + A G + +V TY+ +V A + A + E M+
Sbjct: 190 GLCKCGQIDEACSVFDD---MIAGGYVP-NVITYNALVNGLCKADKMERAHAMIESMVDK 245
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-----SQCCNILLQACVEAC 447
GVTP+ IT+S L++A A V++A+ L M GC PN NIL+ +A
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305
Query: 448 QFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN----- 499
F++A LF Q + G DG +D + PN
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365
Query: 500 ------SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
++ F P + TY L+ A C AL ++E+++
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ IL+D SG E A+ +L+ M G PD + RS L
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
L + + P+ T ++L R G L +V+ + ++
Sbjct: 486 MELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/519 (21%), Positives = 208/519 (40%), Gaps = 109/519 (21%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +RA +E++R++ + N +VF SL++ A D++ L + M+ G+ + +Y
Sbjct: 311 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTY 370
Query: 328 NILLKACC------LAGNTVLAQEIYGEVKHLEAKGV----------------------- 358
+IL+ +GN A+E+ V+ +E G+
Sbjct: 371 SILISGFAKINDSHQSGNMERAEEL---VREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 427
Query: 359 -----------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K + +Y ++ ++ AL + ++M S G+ N T+S LIN
Sbjct: 428 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLING 487
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-- 465
+ A +FEEML++G +P+ N+L++A + DRA + + Q
Sbjct: 488 FIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS 547
Query: 466 ----------VALGEDYDGNTDRISNM---------------------EHKDKQSIT--- 491
A+ D D + M +HK +++++
Sbjct: 548 NRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLD 607
Query: 492 --NTPNFVPNSH--------------------YSSFDKRFSFKPTTTTYNILMKACCTDY 529
+ PN H Y + K K Y L++ACC
Sbjct: 608 KMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSG 667
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
AL EM + N + ILID G+V A ++K M+EDG+ P++ YT
Sbjct: 668 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 727
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I C ++ +++A + EEM ++PN+ TY TL++ +R +C +++M
Sbjct: 728 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC---FEEM 784
Query: 648 WKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLCR 685
AG K ++ L+ + + + G +++CR
Sbjct: 785 KLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCR 823
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 519 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 578
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 579 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 638
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 639 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 694
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 695 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 754
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 755 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 787
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 615 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 674
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 675 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGV-PPNIHTYTSYI 730
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 731 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 790
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 791 PDEASYHCLVTS 802
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 625 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 684
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 685 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 744
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 745 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 800
Query: 406 NA 407
+
Sbjct: 801 TS 802
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 193/400 (48%), Gaps = 36/400 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV-YKNMQKLGVM 321
G+C G ++R + + + NV L FN+L+N V+ L V +++M +G
Sbjct: 331 GLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++ F +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILIDRFCKEGRLEE 442
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++M G+ N + ++ LI+A V+ A+++F +M GC+P+ N L+
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPN 499
+ +F+ A L++ L E NT + + H + ++ V
Sbjct: 503 GLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRGAMQEALKLVN- 553
Query: 500 SHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
D F P TYN L+KA C + + AL +M + GL+PN+IS ILI+
Sbjct: 554 ------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +LF++++ I P
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ +TY TL+ + G + L+ D +G+ N+
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSRGVD---SGFIPNE 704
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 169/410 (41%), Gaps = 47/410 (11%)
Query: 276 RAIYE---DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
R +Y RS NV L++ L+ N K V+ M G+ + ++ +++K
Sbjct: 173 RGVYSCEPTFRSYNVVLDV-----LLAGNCP--KVVPNVFYEMLSKGISPTVYTFGVVMK 225
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A CL A + +K + G + + Y T++ LK+ E+ML
Sbjct: 226 ALCLVNEVDSACAL---LKDMTRHGCVP-NAIVYQTLIHALXKVGRVNEVLKLLEEMLLM 281
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ T++ I+ + +A L + ML G PNS +L+ + D A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 453 FRLFRSWTLSKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
L + V L G G D + H+ S+ P+
Sbjct: 342 RMLLNK--VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF--------- 390
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
TYN L+ C Y V A LMNEM+ G PN I++TILID G +
Sbjct: 391 ----------TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 440
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A +L M G++ + V Y I + ++++ A ++F +M +P++ T+ +L
Sbjct: 441 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ + +++ ++ L +YQDM G AN LI + G +Q+
Sbjct: 501 IFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK---FEEALGLY 517
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 518 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R L
Sbjct: 577 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM----IHRGLTP 632
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD 528
D I+ + + + FDK P TYN L+ C +
Sbjct: 633 DIVTYNSLINGLCKTGRAQ----------EALNLFDKLQVEGICPDAITYNTLISWHCKE 682
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILI 555
+ L++ G PN ++W IL+
Sbjct: 683 GMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 140/354 (39%), Gaps = 28/354 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y +L+ C G A+ + +V + +V ++T++ +
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP--------NVVLFNTLINGYVSRGR 368
Query: 379 WQMALKV-KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A V E MLS G P+ T+++LI G + A L EM GCEPN
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNF 496
IL+ + + + A R+ + L + G IS + +K Q N
Sbjct: 429 ILIDRFCKEGRLEEA----RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM--- 481
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ + KP T+N L+ C + L +M G+ N I++ L
Sbjct: 482 -----FGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G ++ AL+++ M G D + Y IK R+ +++ +LFE+M +
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PN ++ L+ R G+ +Q L +DM G + LI C+
Sbjct: 596 NPNNISCNILINGLCRTGN---IQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ K A++ED+ S+ + N N L+N +++ LE ++M G+ D+ +Y
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G AQE L+ +G+ D TY+T++ + A +
Sbjct: 638 NSLINGLCKTGR---AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLS 693
Query: 388 DMLSAGVTPNTITWSSLIN 406
+ +G PN +TW L++
Sbjct: 694 RGVDSGFIPNEVTWYILVS 712
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 189/436 (43%), Gaps = 42/436 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ PN VTY L+ Y ++ ++ + M ++G + N LI
Sbjct: 522 VDDGLCPNEVTYTALIDG---YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG---- 574
Query: 670 VIQDKNQNQGEVTLCR 685
+ +N G LC+
Sbjct: 575 -LTKQNNFSGAEELCK 589
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGPI--IALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGH-SANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+K+C + R + ++ + GL +++ L+ G + M +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P+++ Y I + + A ++ +++ ++ P+ TY +++ R H++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK---HDLD 267
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V+ M K G + N LI C+
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 196/422 (46%), Gaps = 26/422 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ + + L+ + +L+ + +
Sbjct: 53 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 112
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ AG A I+ K +EA+G+ +V YS ++
Sbjct: 113 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF---KSMEARGLAPNEV-VYSALI 168
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G VE A F+EML+AGC+
Sbjct: 169 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK 228
Query: 431 PNSQCCNILLQACVEACQFDRA-FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ NIL+ +A D A L + T++ + + Y D ++ K +++
Sbjct: 229 PDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI-HTYTAIVDWLAK-NKKIEEA 286
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSP 546
+ N PT TYN L+ C R++ ++ +R + G +P
Sbjct: 287 VALMEKITAN----------GCTPTIATYNALLNGLC-KMGRLEEAIDLLRKIVDNGCTP 335
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++T LID G A ++ K M G++ D V YT I+ +++ ++ QA S++
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ M + P++VT T++ S+ G + + +++ M G N+ LI
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAG---RIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452
Query: 667 CE 668
C+
Sbjct: 453 CK 454
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 192/460 (41%), Gaps = 40/460 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + +RE + + A Y H P++ T+ID G + I++
Sbjct: 92 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 151
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N V+++L++ A + LE+ M+K D +YN+L+ C +G+
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL-KVKEDMLSAGVTPNT 398
A+ + E+ LEA K DV+TY+ ++ F A A + ++ G T +
Sbjct: 212 VEAARAFFDEM--LEAG--CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T++++++ A +E+A+ L E++ GC P N LL + + + A L R
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ N D + T+ + + SF+ FK
Sbjct: 328 I-------------------VDNGCTPDVVTYTSLIDGL-GKEKRSFEAYKLFKEMALRG 367
Query: 519 NILMKACCTDYYR----------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
L C T R ++ M + G P+ ++ + +ID +G + A+
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+I K M G++P+ V Y+ I +++++ A + +MK P+ +TY L+
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G +V+ A + +M +AG K + LI +C+
Sbjct: 488 CKSG---DVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 524
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 129/583 (22%), Positives = 226/583 (38%), Gaps = 95/583 (16%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEV 171
+ GR++ + +L+K+ + G P L DG G +KL K R L V
Sbjct: 33 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV----------------NLAIR-YA 214
+ E+L+ ++P + CV PDV A+R +
Sbjct: 93 CYTALIRELLQTGKIPQASSVYKTMTSHGCV--PDVVTLSTMIDGLSKAGRIGAAVRIFK 150
Query: 215 CIVPRA----DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC- 269
+ R ++++ + K R + AL KK +P+ +ID G+C
Sbjct: 151 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLID--GLCK 208
Query: 270 -GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
GD +RA +++ M + G D+ +YN
Sbjct: 209 SGDVEAARAFFDE---------------------------------MLEAGCKPDVYTYN 235
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C AGNT A + + +D+ TY+ IV A K + A+ + E
Sbjct: 236 ILISGFCKAGNTDAASHSLAQETTING---CTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ + G TP T+++L+N G +E+A+ L +++ GC P+ L+ + +
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A++LF+ L L D T I + K ++ SH D
Sbjct: 353 SFEAYKLFKEMALR----GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD-- 406
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+T + L KA R+ A + M GL+PN + ++ LI + ++
Sbjct: 407 --VVTLSTMIDGLSKA-----GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 459
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++L M++ +PD + Y I +S ++ A + F+EM +P++ TY L+
Sbjct: 460 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 519
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G+ V+ DM + AN LI C+
Sbjct: 520 SGFCKAGN---TDAACGVFDDMSSSRCSANVVTYGALISGLCK 559
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 48/287 (16%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + E + + G TP T+++L+N G +E+A+ L +++ GC P+ L+
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + A++LF+ L L D T I + K +P +
Sbjct: 65 GLGKEKRSFEAYKLFKEMALR----GLALDTVCYTALIRELLQTGK---------IPQA- 110
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++ M + G P+ ++ + +ID +
Sbjct: 111 -------------------------------SSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + A++I K M G++P+ V Y+ I +++++ A + +MK P+ +TY
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ + G +V+ A + +M +AG K + LI +C+
Sbjct: 200 NVLIDGLCKSG---DVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + +RE + + A Y H P++ T+ID G + I++
Sbjct: 373 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 432
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N V+++L++ A + LE+ M+K D +YNIL+ C +G+
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + E+ LEA K DV+TY+ ++ F A A V +DM S+ + N +
Sbjct: 493 VEAARAFFDEM--LEAG--CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVV 548
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+ +LI+ + +A F+ M + G
Sbjct: 549 TYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 189/436 (43%), Gaps = 42/436 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ PN VTY L+ Y ++ ++ + M ++G + N LI
Sbjct: 522 VDDGLCPNEVTYTALIDG---YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG---- 574
Query: 670 VIQDKNQNQGEVTLCR 685
+ +N G LC+
Sbjct: 575 -LTKQNNFSGAEELCK 589
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGPI--IALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRG-HSANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+K+C + R + ++ + GL +++ L+ G + M +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P+++ Y I + + A ++ +++ ++ P+ TY +++ R H++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK---HDLD 267
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V+ M K G + N LI C+
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 213/458 (46%), Gaps = 32/458 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + +I+E++R+ NI FN+ + + + KFT +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F EM++ I P+++TY T + + Y + ++ + V + M K G + N +++
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 666 WCEGVIQDKNQNQGEVTLCRRTNSQRPQS---LLLEKV 700
+C+ + K++ + V R + P+ LLE++
Sbjct: 779 YCK--LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERI 814
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 194/444 (43%), Gaps = 36/444 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GK+ + SA ++ ++ S ++Y ++I G Y ++ +++ +
Sbjct: 183 LGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPT 242
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ +N ++NV + + M+ G+ D +YN L+ CC G+ L QE
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGS--LHQEAA 299
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ ++A G D TY+ ++ V+ + + A+KV +M+ G +P+ +T++SLI+A
Sbjct: 300 QVFEEMKAAG-FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
A G++++AM L +M + G +P+ LL A + + A +F +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T A + Y GN + + M I + N P T+N L
Sbjct: 419 ICTFNAFIKMY-GNRGKFTEM-----MKIFDEINVC------------GLSPDIVTWNTL 460
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + V + EM+ G P ++ LI A G+ E A+ + + M + G+
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A Y + E+
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA---YANGKEIGL 577
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
++ ++++ + LK L+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLV 601
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 197/458 (43%), Gaps = 30/458 (6%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D+ + + F + + SA+ ++ + PN+ I + G G + +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I++++ ++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAY 499
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G+ A +Y + + GV D+ TY+T++ A W+ + KV +M
Sbjct: 500 SRCGSFEQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDR 451
PN +T+ SL++A AN + L EE+ EP + L+ C + + +R
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
AF + S L S + ++ + N V + + K F
Sbjct: 616 AFSELKERGFSPDITTLN----------SMVSIYGRRQMVAKANGVLD-----YMKERGF 660
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + + A +
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I MR G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE-LIEEW 666
+ E + + +++ K D L E ++++W
Sbjct: 781 KLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKKW 818
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQA 417
LDV++Y++++ FA++ ++ A+ V + M G P IT++ ++N G +
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
L E+M G P++ N L+ C A ++F A G YD T
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK------AAGFSYDKVTY 317
Query: 478 R----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ H+ K+++ V N F P+ TYN L+ A D +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLN----------GFSPSIVTYNSLISAYARDGMLDE 367
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L N+M G P+ ++T L+ +G VE A+ I + MR G P++ + IK
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + +F+E+ + P++VT+ TLL + G EV V+++M +AG
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRAG 484
Query: 652 YKANDTYLKELIEEW 666
+ LI +
Sbjct: 485 FVPERETFNTLISAY 499
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E+++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRN---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ N ++ G S + S+T LI A SG A+ + K M EDG P ++ Y + V
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 595 R-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + SL E+MK I P+ TY TL+ R GSLH Q+ V+++M AG+
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR-GSLH--QEAAQVFEEMKAAGFS 311
Query: 654 ANDTYLKELIE 664
+ L++
Sbjct: 312 YDKVTYNALLD 322
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+I G G V A + ++EDG S DV +YT+ I S R ++A ++F++M+
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 613 QIQPNLVTYITLLRARSRYGS 633
+P L+TY +L + G+
Sbjct: 238 GCKPTLITYNVILNVFGKMGT 258
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 186/396 (46%), Gaps = 25/396 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
++ ++R+ NI FN+L+ ++ + KF ++V++ ++ + D+ ++N LL
Sbjct: 231 VFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLL---A 287
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G + E+ G K ++ G + + TY+T++ ++ + A+ + + ML AG+T
Sbjct: 288 VFGQNGMDSEVSGVFKEMKRAGFVP-ERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGIT 346
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+++++ A A GL EQ+ +F EM C+PN LL A + R
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGR---- 402
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPT 514
+AL E+ + K + + + + + + + KR F P
Sbjct: 403 ---------MLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPD 453
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+T N ++ + + ++N M G +P+ ++ L+ S N E + ++LK
Sbjct: 454 LSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLK 513
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ PD ++Y T I R+ R+K+A +F EM+ + P+++TY T + + Y
Sbjct: 514 EILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFV---ASYA 570
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + + V + M K G K N +++ +C+
Sbjct: 571 ADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCK 606
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 34/419 (8%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEV 311
++Y ++I C G Y ++ +++ + + + +N ++NV +
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ GV+ D +YN L+ CC G+ L +E K +++ G + D TY+ ++
Sbjct: 92 FEGMKNAGVLPDEYTYNTLI-TCCRRGS--LHEEAAAVFKDMKSMGFVP-DKVTYNALLD 147
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
V+ ++ + A++V +M G +P+ +T++SLI+A A GL+++AM L +M++ G
Sbjct: 148 VYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINL 207
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHKD 486
+ LL V A + + A R+F + + + GN + + M K
Sbjct: 208 DVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEM-MKV 266
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGL 544
+ I N+ P T+N L+ + V + EM+ G
Sbjct: 267 FEEIKNS----------------CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 310
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P ++ LI A G+ + A+ I K M E G++PD+ Y + R +Q+
Sbjct: 311 VPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEK 370
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+F EMK + +PN +TY +LL A Y + E+ + LA+ +++ + + LK L+
Sbjct: 371 IFAEMKDGRCKPNELTYCSLLHA---YANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 193/441 (43%), Gaps = 56/441 (12%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L FVR GK SA+R + + PN+ +I + G G + + ++E++
Sbjct: 215 LLSGFVRA-GKDE---SAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Query: 283 RSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +I +N+L+ V N D + + V+K M++ G + + +YN L+ A G+
Sbjct: 271 KNSCCVPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERDTYNTLISAYSRCGS 329
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +IY + LEA + D+ TY+ ++ A W+ + K+ +M PN +
Sbjct: 330 FDQAMDIYK--RMLEAG--ITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNEL 385
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS----------QCCNILLQACVEACQF 449
T+ SL++A AN + + + L EE+ EP++ C++L++A V +
Sbjct: 386 TYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLEL 445
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
R G D +T + +Q T T + +F
Sbjct: 446 KRK----------------GFSPDLSTLNAMLSIYGRRQMFTKTNEIL------NFMNES 483
Query: 510 SFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P+ TYN L M + ++ R + ++ E+ G+ P+ IS+ +I A +G ++ A
Sbjct: 484 GFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEA 543
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I MRE G+ PDV+ Y T + + A + M + +PN TY +++
Sbjct: 544 SRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDG 603
Query: 628 RSRY----------GSLHEVQ 638
++ SLHE+
Sbjct: 604 YCKHNHRDDAIMFISSLHELD 624
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 19/307 (6%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K LDV+ Y++++ ++ A+ V + M G P IT++ ++N G+
Sbjct: 26 KDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 85
Query: 416 QAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+ LFE M AG P+ N L+ C + A +F+ S V Y+
Sbjct: 86 NKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK-SMGFVPDKVTYNA 144
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D + + K+++ N P+ TYN L+ A D +A
Sbjct: 145 LLD-VYGKSRRTKEAMEVLREMEVN----------GCSPSIVTYNSLISAYARDGLLKEA 193
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L N+M G++ + ++T L+ +G E A+++ MR G P++ + IK+
Sbjct: 194 MELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKM 253
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ + +FEE+K+ P++VT+ TLL + G EV V+++M +AG+
Sbjct: 254 HGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRAGF 310
Query: 653 -KANDTY 658
DTY
Sbjct: 311 VPERDTY 317
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C + + A+ +M+++G P+ +++ L+D G S + A+++
Sbjct: 102 PDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEV 161
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M +G SP +V Y + I R LK+A L +M I ++ TY TLL R
Sbjct: 162 LREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVR 221
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
G + + + V+ +M AG K N LI+
Sbjct: 222 AG---KDESAMRVFAEMRAAGCKPNICTFNALIK 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L+N++ G + ++T LI AC +G A+ + K M E+G P ++ Y + V
Sbjct: 19 SLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVY 78
Query: 594 VR-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ + LFE MK+ + P+ TY TL+ R GSLHE + AV++DM G+
Sbjct: 79 GKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITC-CRRGSLHE--EAAAVFKDMKSMGF 135
Query: 653 KANDTYLKELIEEW 666
+ L++ +
Sbjct: 136 VPDKVTYNALLDVY 149
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G G V A +L + +DG DV AYT+ I CV + R ++A +F++M+
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 613 QIQPNLVTYITLLRARSRYG 632
+P L+TY +L + G
Sbjct: 63 GCKPTLITYNVILNVYGKMG 82
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQ-ILKIM 574
Y L+ AC ++ +A+M +M G P I++ ++++ G G ++ + + M
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGM 95
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y T I C R ++A ++F++MK P+ VTY LL YG
Sbjct: 96 KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV---YGKS 152
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD----KNQ 676
++ + V ++M G + LI + +G++++ KNQ
Sbjct: 153 RRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQ 199
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 29/405 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 566
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 671
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 792 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMGIKPD 833
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 715
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 716 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 191/464 (41%), Gaps = 63/464 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSS 504
K V L + + NM+ K+ Q + + P F+P + + S
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
D R S + PT T+N L+ KA +++EM G+S N ++
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I N Y L+ +R G + E + Q M K G K +
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 763
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 675 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 783
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 784 ----------------TQTIEEME------------------------ALGVKPNIKTYT 803
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 863
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 864 KEMVEAGLIVDM 875
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 21/291 (7%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ + E + P+ + ++ G + +A FE M G P S+
Sbjct: 294 WQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 349
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A D A R +++L Y S H +
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSL-VTYSVIVGGFSKAGHAEAAD--------- 399
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
++ KR + Y ++ A C + R +AL+ EM G+ + ++D
Sbjct: 400 --YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + L + K ++E G +P VV Y I + + ++ +A + MK ++
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
NL TY ++ + L + AV++DM K G K + +I +C
Sbjct: 518 NLKTYSMMING---FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 193/484 (39%), Gaps = 88/484 (18%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
QPN+VTY ++ +G + +++ CL + + M G N + LI+ C+ D
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 674 KNQN 677
N
Sbjct: 832 VAHN 835
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 57/440 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ YD D + + D+
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV----YDALIDGLCKVGKLDEA 693
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
T F T TY+ L+ Y++VK ++++M
Sbjct: 694 QEVKTEM-----------SEHGFPATLYTYSSLIDR----YFKVKRQDLASKVLSKMLEN 738
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+PN + +T +ID G + A +++++M E G P+VV YT I +++
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWK---AGY-KANDT 657
L E M + PN VTY L+ + G+L L + Q W AGY K +
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 658 YLKELIEEWCEGVIQDKNQN 677
+ KE IE G++ + Q+
Sbjct: 859 FNKEFIESL--GLLDEIGQD 876
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 183/482 (37%), Gaps = 120/482 (24%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC------------GD- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG---FC 650
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEV---------- 681
H V++ + M G + N LI+ C+ G + + + + E+
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 682 ---TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRMM 735
+L R + Q L + ++ L+ S A N+ I + GL KV +++MM
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 736 KE 737
+E
Sbjct: 771 EE 772
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 64/380 (16%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + + +++ AF LFEEMK + ++ TY ++ + + G ++Q + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL---IEQARKWFNE 543
Query: 647 MWKAGYKANDTYLKELIEEW 666
M + G N LI +
Sbjct: 544 MREVGCTPNVVTYTALIHAY 563
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 507 KRFSFKPTTTTYNILMKACC-TDYYRVKALMN-EMRTVGLSPNHISWTILIDACGGSGNV 564
K F F+P+ +TYN L++A D +L++ EM L + + + G
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL +++ + PD V YT I + ++A M+ PN+VTY TL
Sbjct: 287 REALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 625 LRARSRYGSLHEVQ--QCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L G L++ Q +C V M G + L+ +C
Sbjct: 344 L-----CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 171/399 (42%), Gaps = 64/399 (16%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMKSRAIYEDLRSQN 286
+ K D + ++A+ S PN+ T++D C G G K+ A +++ +
Sbjct: 215 KLNKAEDAIEDMKAWGIS------PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 287 VTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N FN+L++ D + + ++ MQK G+ ++ +YN L+ C G A
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ ++ L LK ++ TY+ ++ F K + A KV +D+ + PN IT++++
Sbjct: 329 DLWDKMVGLG----LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G++E+ L ML G PN N L+ L R L
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG------------LCRKQDLQAA 432
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ L E ME+K K TYNIL+
Sbjct: 433 KELLNE-----------MENK------------------------GLKGDVVTYNILIDG 457
Query: 525 CC-TDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C D R + L+NEM +GL PNH+++ L+D G ++ AL + M ++ P+
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
VV Y IK + +L+ A L EM + PN TY
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 177/400 (44%), Gaps = 52/400 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N+ FN +N A L + ++M+ G+ ++ +YN L+ C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ + +K + A + +V T++T++ F + A K E+M G+
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEV-TFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++SLIN N G +E+A+ L+++M+ G +PN N L+ + A ++
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKR------ 508
F D +S KQ + PN + N+ ++ K
Sbjct: 366 F--------------------DDVS------KQEL--VPNVITFNTMIDAYCKEGMMEEG 397
Query: 509 FSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
FS P +TYN L+ C D K L+NEM GL + +++ ILID
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A ++L M G+ P+ V Y T + +LK A ++ M+ + QPN
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+VTY L++ Y +++++ + +M + G N T
Sbjct: 518 VVTYNVLIKG---YCKINKLEAANGLLNEMLEKGLNPNRT 554
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 178/417 (42%), Gaps = 51/417 (12%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--T 308
SPN++ +I+ G C G + +++ + ++ + ++ ++ F+ L+N + KF
Sbjct: 280 SPNLFTYNCMIN--GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+Y M G++ + +YN ++ A+ ++ +L A DV T+S
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF----YLMATKGCSPDVITFSI 393
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + AK +K+ +M G+ NTIT+++LI+ G + A+ L +EM+ +G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN CN LL + A +F+ SK + ++
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN--------------- 498
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
+P TYNIL+ + + + L EM GL P
Sbjct: 499 ---------------------DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ +ID ++ A Q+ M G SPDVV +TT I + R+ +F
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM I N +TY TL+ + G+++ L ++Q+M +G + ++ ++
Sbjct: 598 CEMGRRGIVANAITYRTLIHGFCQVGNINGA---LDIFQEMISSGVYPDTITIRNML 651
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 179/437 (40%), Gaps = 61/437 (13%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
+ID C + G ++ +++ + + + NIY F L+ + L F L +
Sbjct: 76 VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFG 135
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+ KLG + +++ LL C+ A + ++ K +V ++T++
Sbjct: 136 KITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI--------CKPNVIAFTTLMNGL 187
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPN 432
A+ + + M+ G+ PN IT+ ++++ G A++L +M + +PN
Sbjct: 188 CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPN 247
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
++ A ++ D G D + S M+ K
Sbjct: 248 V----VIYSAIIDGLWKD------------------GRQTDAQ-NLFSEMQEKGISPNLF 284
Query: 493 TPNFVPNSHYSS-------------FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
T N + N SS F+++ S P T+++L+ A + ++ + L N
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMS--PDVVTFSVLINALVKEGKFFEAEELYN 342
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ PN I++ +ID ++ A ++ +M G SPDV+ ++ I +K
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R+ L EM + N +TY TL+ + G+L+ L + Q+M +G N
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA---LDLLQEMISSGVCPNVV 459
Query: 658 YLKELIEEWC-EGVIQD 673
L++ C G ++D
Sbjct: 460 TCNTLLDGLCNNGKLKD 476
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 198/432 (45%), Gaps = 32/432 (7%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVY 312
+Y+ +I+ G G + S + ++ + V+ +I +N+++N A D + L ++
Sbjct: 171 VYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLF 230
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ G+ D+ +YN LL AC G L E + + G++ D+ TYS +V+
Sbjct: 231 AEMRHEGIQPDVITYNTLLGACAHRG---LGDEAEMVFRTMNESGIVP-DINTYSYLVQT 286
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + ++ +M S G P+ +++ L+ A A G +++AM +F +M AGC N
Sbjct: 287 FGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD----KQ 488
+ ++LL + ++D +F +S T D D T I + K+
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT------DPDAGTYNILIQVFGEGGYFKE 400
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
+T + V + +P TY L+ AC Y K ++ M G+ P
Sbjct: 401 VVTLFHDMVEE----------NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVP 450
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++T +I+A G + E AL + M E G +P V Y + I R K+A ++
Sbjct: 451 SSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAIL 510
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
M ++ ++ ++ +++A + G + ++ + Y +M KA + N+ L+ ++ +
Sbjct: 511 SRMNESGLKRDVHSFNGVIKAFRQGG---QYEEAVKSYVEMEKANCEPNELTLEVVLSVY 567
Query: 667 CEGVIQDKNQNQ 678
C + D+++ Q
Sbjct: 568 CSAGLVDESEEQ 579
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 27/340 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+S D+ S NV L Y +K ++V++ MQ G +A+ A+Y++LL
Sbjct: 303 MESGGNLPDITSYNVLLEAYA-------ELGSIKEAMDVFRQMQAAGCVANAATYSVLLN 355
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G ++I+ E+K D TY+ +++VF + +++ + + DM+
Sbjct: 356 LYGKHGRYDDVRDIFLEMKVSNTDP----DAGTYNILIQVFGEGGYFKEVVTLFHDMVEE 411
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V PN T+ LI AC GL E A + M + G P+S+ +++A +A ++ A
Sbjct: 412 NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEA 471
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F + + + E Y+ + +K+ ++I + N
Sbjct: 472 LVVFNTMNEVGSNPTV-ETYNSFIHAFARGGLYKEAEAILSRMN------------ESGL 518
Query: 512 KPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
K ++N ++KA +A+ + EM PN ++ +++ +G V+ + +
Sbjct: 519 KRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEE 578
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ++ G+ P V+ Y + + ++ RL A++L +EM
Sbjct: 579 QFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 68/338 (20%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG----------------- 393
K+++ + K + Y+ ++ + +V ++M S G
Sbjct: 124 KYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGR 183
Query: 394 ------------------VTPNTITWSSLINACANAGL-VEQAMHLFEEMLQAGCEPNSQ 434
V+P+ +T++++INACA GL E + LF EM G +P+
Sbjct: 184 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 243
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALGEDYDGNTDRISNMEH--KD 486
N LL AC D A +FR+ S T L + + G +R+ + ++
Sbjct: 244 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTF-GKLNRLEKVSELLRE 302
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVG 543
+S N P+ T+YN+L++A + +K M+ +M+ G
Sbjct: 303 MESGGNLPDI-------------------TSYNVLLEAYA-ELGSIKEAMDVFRQMQAAG 342
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
N ++++L++ G G + I M+ PD Y I+V K+
Sbjct: 343 CVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV 402
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+LF +M ++PN+ TY L+ A + G + ++ L
Sbjct: 403 TLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKIL 440
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 25/300 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G Y ++ I + + + + + ++ + L V
Sbjct: 415 PNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVV 474
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN + A G L +E + + G LK DV +++ ++K
Sbjct: 475 FNTMNEVGSNPTVETYNSFIHAFARGG---LYKEAEAILSRMNESG-LKRDVHSFNGVIK 530
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F ++ A+K +M A PN +T +++ +AGLV+++ F+E+ +G P
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590
Query: 432 NSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ C ++L + + + A+ L + +S +G+ G+ D SN +
Sbjct: 591 SVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQ----- 645
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
I NS RF YN L++A + R +A ++NE GL P
Sbjct: 646 -IVEYVFDKLNSEGCGLGMRF--------YNALLEALWWMFQRERAARVLNEASKRGLFP 696
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 528 DYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D+ R L M R + PN +TI+I G G ++ ++ M +G++ V Y
Sbjct: 115 DWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVY 174
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I R+ + + L MK ++ P+++TY T++ A +R G + + L ++ +
Sbjct: 175 TAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGG--LDWEGLLGLFAE 232
Query: 647 MWKAGYKAN 655
M G + +
Sbjct: 233 MRHEGIQPD 241
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 184/416 (44%), Gaps = 51/416 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAA 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +YN ++ C A++++ +L A DVFT++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ CN LL + + A +F++ SK + ++G
Sbjct: 462 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG--------------- 506
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ P+
Sbjct: 507 ---------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 605
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM I + + YITL+ + G+++ L ++Q+M +G + ++ ++
Sbjct: 606 EMGRRGIVADAIIYITLIYGFRKVGNINGA---LDIFQEMISSGVYPDTITIRNML 658
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 171/385 (44%), Gaps = 44/385 (11%)
Query: 309 LEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L + + M+++ ++ ++ Y+ ++ + C G AQ ++ E ++ KG+ D+FTY+
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE---MQEKGIFP-DLFTYN 294
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ F + W A ++ ++ML ++P+ +T+++LINA G +A L++EML
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354
Query: 428 GCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDG--NTDRISNM 482
G PN+ N ++ + + D A F L + S DG RI +
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD- 413
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ + P R T TYN L+ C D L +M
Sbjct: 414 ---GMELLHEMP-------------RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMSPDVVAYTTA 589
+ G+ P+ ++ L+D +G ++ AL++ K M++ +G+ PDV+ Y
Sbjct: 458 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 517
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + + +A L+EEM H I P+ +TY +++ + L E Q ++ M
Sbjct: 518 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ---MFVSMGS 574
Query: 650 AGYKANDTYLKELIEEWCE-GVIQD 673
+ N LI +C+ G + D
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDD 599
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 157/392 (40%), Gaps = 34/392 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T++T
Sbjct: 99 ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTFTT 154
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ AL M PN +T+++L+N G + +A+ L + M++ G
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHKDK 487
+P ++ + A L R + Y D + + H D
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 488 QSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILMKA 524
Q++ P+ F NS F R+S P TYN L+ A
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ ++ L +EM G+ PN I++ +ID ++ A + +M G SPD
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V +TT I +KR+ L EM + N VTY TL+ G L+ L
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA---LD 451
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ Q M +G + L++ C+ G ++D
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 483
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 193/484 (39%), Gaps = 88/484 (18%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
QPN+VTY ++ +G + +++ CL + + M G N + LI+ C+ D
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 674 KNQN 677
N
Sbjct: 832 VAHN 835
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 57/440 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ YD D + + D+
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV----YDALIDGLCKVGKLDEA 693
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
T F T TY+ L+ Y++VK ++++M
Sbjct: 694 QEVKTEM-----------SEHGFPATLYTYSSLIDR----YFKVKRQDLASKVLSKMLEN 738
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+PN + +T +ID G + A +++++M E G P+VV YT I +++
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWK---AGY-KANDT 657
L E M + PN VTY L+ + G+L L + Q W AGY K +
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 658 YLKELIEEWCEGVIQDKNQN 677
+ KE IE G++ + Q+
Sbjct: 859 FNKEFIESL--GLLDEIGQD 876
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 183/482 (37%), Gaps = 120/482 (24%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG---FC 650
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEV---------- 681
H V++ + M G + N LI+ C+ G + + + + E+
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 682 ---TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRMM 735
+L R + Q L + ++ L+ S A N+ I + GL KV +++MM
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 736 KE 737
+E
Sbjct: 771 EE 772
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 64/380 (16%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + + +++ AF LFEEMK + ++ TY ++ + + G ++Q + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL---IEQARKWFNE 543
Query: 647 MWKAGYKANDTYLKELIEEW 666
M + G N LI +
Sbjct: 544 MREVGCTPNVVTYTALIHAY 563
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 59/286 (20%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
L++ LFR+ +S+ + L D IS+ME
Sbjct: 959 SLIKG------------LFRNSKISEALLLL--------DFISHME 984
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 507 KRFSFKPTTTTYNILMKACC-TDYYRVKALMN-EMRTVGLSPNHISWTILIDACGGSGNV 564
K F F+P+ +TYN L++A D +L++ EM L + + + G
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL +++ + PD V YT I + ++A M+ PN+VTY TL
Sbjct: 287 REALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 625 LRARSRYGSLHEVQ--QCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L G L++ Q +C V M G + L+ +C
Sbjct: 344 L-----CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 181/400 (45%), Gaps = 28/400 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLA 337
++ + V N+Y + + V +F E Y+ M+ G D+ ++ +L++ C A
Sbjct: 299 EMEAHGVKPNVYSYTICIRVLGQARRFD-EAYRILAEMENEGCKPDVITHTVLIQVLCDA 357
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ ++K K K D TY T++ FAD Q +++ M + G N
Sbjct: 358 GRISDAKDVFWKMK----KSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDN 413
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++++I+A G V +A+ +F+EM Q G P N L+ ++A +F A LF+
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 473
Query: 458 SWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ G +G T + N K +SI + K P
Sbjct: 474 YMDIH------GPKPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVV 520
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
N ++ K + +E++ +G+SP+ I++T++I C + + A++I M
Sbjct: 521 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 580
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+ PDV+ + I ++ R +A+ +F ++K ++P TY TLL R G +
Sbjct: 581 IENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 640
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
EV L ++M+ + Y N +++ C+ G + D
Sbjct: 641 KEVMHLL---EEMYHSNYPPNLITYNTILDCLCKNGAVND 677
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 211/504 (41%), Gaps = 82/504 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
+ DE +RI+ N KPDV + I+ C R + +
Sbjct: 323 RRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 382
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +F + S + ++A K + N+ +ID G ++ ++++++
Sbjct: 383 ITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K M G + ++ + + +G ++
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 503 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 558
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+++F
Sbjct: 559 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL--- 615
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 616 --------------------------------------------KEMNLEPTDGTYNTLL 631
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 632 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 691
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 692 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 750
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+ Y + G K + + L+E
Sbjct: 751 IKEY--FLQPGSKTDRSSCHSLME 772
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 185/421 (43%), Gaps = 61/421 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L +NSL+ V+ + + ++
Sbjct: 799 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLF 857
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 858 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 913
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 914 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 973
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 974 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 1002
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
P +Y I++ C L ++ +GL P+ I+
Sbjct: 1003 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A ++EE+
Sbjct: 1047 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1106
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT--YLKELIEEWCE 668
+PN+ TY L+R S GS A Y M G N + ++ EL++ + +
Sbjct: 1107 TKGWKPNVFTYNALIRGYSVSGS---TDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLK 1163
Query: 669 G 669
G
Sbjct: 1164 G 1164
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 162/394 (41%), Gaps = 74/394 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMA 325
KS E + S +TL+ + L+ + AH E+ K + GV
Sbjct: 782 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH------ELVKKFKSFGVSLKTG 835
Query: 326 SYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN L+ C L ++ A+ ++ E+K L D FTY+ ++ + + L
Sbjct: 836 SYNSLI--CGLVDENLIDIAEGLFAEMKELGCGP----DEFTYNLLLDAMGKSMRIEEML 889
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV+E+M G +T++++I+ + +EQA+ L+ ++ G P LL
Sbjct: 890 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 949
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++A + + A LF
Sbjct: 950 LKAGRIEDAENLFNEML------------------------------------------- 966
Query: 504 SFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ K T YNIL+ + +V L +M G++P+ S+TI+ID +
Sbjct: 967 ----EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + L + + E G+ PD++ Y I +SKRL++A SLF EM+ I PNL TY
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+L+ + G E + +Y+++ G+K N
Sbjct: 1083 NSLILHLGKAGKAAEAGK---MYEELLTKGWKPN 1113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 184/460 (40%), Gaps = 65/460 (14%)
Query: 236 DLVSALRAYDASKKHLSS-------PNMY----ICRTIIDVCGICGDYMKSRAIYEDLRS 284
D++ ALR+ D + L P + C ++D+ G +++ ++
Sbjct: 138 DVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQR 197
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q V N+ F ++ + L+ M++ G++ + +YN L+ +G
Sbjct: 198 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 257
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+Y K + GV+ V TYS ++ F + + L + +M + GV PN +++
Sbjct: 258 ALEVY---KVMMVDGVVP-SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 313
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
I A ++A + EM GC+P+ +L+Q +A + A +F W +
Sbjct: 314 ICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF--WKMK 371
Query: 463 KTQVALGEDYDGNTDRISNMEHKDK-------QSITNTPNFVPNSHYSS----------- 504
K+ D DR++ + DK QS+ N + Y+
Sbjct: 372 KS--------DQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDA 423
Query: 505 -------------FD--KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
FD K+ P +YN L+ + L M G PN
Sbjct: 424 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPN 483
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + I+ G SG A+Q ++M+ G+ PDVVA + +S RL A +F
Sbjct: 484 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 543
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
E+K + P+ +TY +++ S+ E + ++ DM
Sbjct: 544 ELKAMGVSPDTITYTMMIKCCSKASKFDEA---VKIFYDM 580
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ TY++LM A D V L+ EM G+ PN S+TI I G + + A +I
Sbjct: 272 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRI 331
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M +G PDV+ +T I+V + R+ A +F +MK +P+ VTYITLL +
Sbjct: 332 LAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---DK 388
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ E Q + ++ M GY N +I+ C+
Sbjct: 389 FADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 426
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ ++++L+ A G +VE L +L+ M G+ P+V +YT I+V +++R
Sbjct: 265 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARR 324
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A+ + EM++ +P+++T+ L++ G + + + V+ M K+ K +
Sbjct: 325 FDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKD---VFWKMKKSDQKPDRVT 381
Query: 659 LKELIEEWCE 668
L++++ +
Sbjct: 382 YITLLDKFAD 391
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ L+ SG AL++ K+M DG+ P V Y+ + + +
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ L EM+ + ++PN+ +Y +R + E + LA +M G K +
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILA---EMENEGCKPDVIT 346
Query: 659 LKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSL----LLEKVA 701
LI+ C+ G I D +V + + Q+P + LL+K A
Sbjct: 347 HTVLIQVLCDAGRISDAK----DVFWKMKKSDQKPDRVTYITLLDKFA 390
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ IID G + L + ++ +N L++ + L+ +
Sbjct: 1006 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1065
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQK G++ ++ +YN L+ AG A ++Y E L KG K +VFTY+ ++
Sbjct: 1066 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE---LLTKG-WKPNVFTYNALI 1121
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ ++ + A M+ G PN+ T
Sbjct: 1122 RGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 189/436 (43%), Gaps = 42/436 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ PN VTY L+ Y ++ ++ + M ++G + N LI
Sbjct: 522 VDDGLCPNEVTYTALIDG---YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG---- 574
Query: 670 VIQDKNQNQGEVTLCR 685
+ +N G LC+
Sbjct: 575 -LTKQNNFSGAEELCK 589
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGH-SANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+K+C + R + ++ + GL +++ L+ G + M +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P+++ Y I + + A ++ +++ ++ P+ TY +++ R H++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK---HDLD 267
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V+ M K G + N LI C+
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 203/506 (40%), Gaps = 93/506 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ R ++ C G + + I + ++ N +FNSL++ + D + ++
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364
Query: 312 YKNMQKLGVMADMASYNILLKACC----LAGNTVL--AQEIYGEVKHLE----------- 354
+K M K G YNI + + C L G+ +L A++ Y E+ L
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 355 ---------------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+KG + D TYS ++ DA + A + E+M G
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDS-TYSKVIGFLCDASKVEKAFLLFEEMKKNG 483
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++ LI++ AGL++QA + F+EML+ C PN L+ A ++A + A
Sbjct: 484 IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDAN 543
Query: 454 RLFRSWTL--SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+LF L SK V G G D+ + + + I ++ Y
Sbjct: 544 KLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESS----DIDMYFKL 599
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
D P TY L+ C +A L++ M G PN I + LID +G
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL------------------------ 599
+E A ++ M E G P++ Y++ I + KRL
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719
Query: 600 -----------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++A+ L +M+ PN++TY ++ +G + +++QCL +Y+DM
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDG---FGKIGKIEQCLELYRDMC 776
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDK 674
G N + LI C + D+
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDE 802
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 40/386 (10%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+ V A L V++ M G D + + C AG G+
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRC-------GDA 259
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L K D Y+ +V +A +Q A+ + + M S PN +T+ L++ C
Sbjct: 260 LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLG 319
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
G + + + M+ GC PN + N L+ A ++ + A++LF+ Q
Sbjct: 320 KGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLL 379
Query: 466 -------VALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYS-------SFDKRF- 509
+ E+ G + ++ + + + N V S+++ FDK F
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFE 439
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P +TY+ ++ C KA L EM+ G+ P+ ++TILID+
Sbjct: 440 IICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A M D +P+VV YT+ I ++++++ A LFE M +PN+V
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV 559
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQ 645
TY L+ + G + + Q A Q
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 188/441 (42%), Gaps = 42/441 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE- 280
+ + + + + K R + A + ++ S PN+ +ID G K+ IY
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Query: 281 ---DLRSQNV------------TLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
D+ S ++ T NI + +L++ A+ ++ E+ M G +
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPN 643
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQE++ VK E +G +++TYS+++ K + L
Sbjct: 644 QIVYDALIDGFCKTGKLENAQEVF--VKMSE-RGYCP-NLYTYSSLINSLFKEKRLDLVL 699
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML TPN + ++ +I+ G E+A L +M + GC PN I A
Sbjct: 700 KVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV----ITYTAM 755
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ F + ++ + L + + G + T R+ + H + + + + +
Sbjct: 756 IDG--FGKIGKIEQCLELYRDMCSKGCAPNFITYRVL-INHCCSTGLLDEAHRLLDEMKQ 812
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
++ R ++Y +++ ++ L++E+ P + ILID +G
Sbjct: 813 TYWPRH-----ISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGR 867
Query: 564 VEGALQILKIMREDGMSPDVVA-----YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+EGAL +L+ E SP + YT+ I+ + ++ +AF L+ M + + P L
Sbjct: 868 LEGALNLLE---EISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPEL 924
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
T++ L++ +R G E Q
Sbjct: 925 STFVHLIKGLTRVGKWQEALQ 945
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 147/381 (38%), Gaps = 63/381 (16%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L++ CC G +A E G +K K TY+ +++VF A A V
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKA----SPTTYNALIQVFLRADKLDTAFLVHR 229
Query: 388 DMLSAG--------------------------------VTPNTITWSSLINACANAGLVE 415
+M ++G P+T+ ++ +++ A L +
Sbjct: 230 EMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQ 289
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM + + M C PN ILL C+ Q R R+ + + E N
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRIL--------SMMMTEGCYPN 341
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD----- 528
+ +++ H +S + Y F K + +P YNI + + C++
Sbjct: 342 REMFNSLVHAYCKSRDYS------YAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPG 395
Query: 529 ---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +EM +G+ N ++ + G+G + A +I+ M G PD
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+ I + ++++AF LFEEMK I P++ TY L+ + + G +QQ +
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL---IQQARNWFD 512
Query: 646 DMWKAGYKANDTYLKELIEEW 666
+M + N LI +
Sbjct: 513 EMLRDNCTPNVVTYTSLIHAY 533
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 16/168 (9%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGG 560
K F +K + TTYN L++ + R L EM G + + +
Sbjct: 197 KDFGYKASPTTYNALIQV----FLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCK 252
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G AL +L+ ++ PD V Y + + ++A + + M+ PN+VT
Sbjct: 253 AGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVT 309
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y LL G L ++ L++ M G N L+ +C+
Sbjct: 310 YRILLSGCLGKGQLGRCKRILSM---MMTEGCYPNREMFNSLVHAYCK 354
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 192/450 (42%), Gaps = 73/450 (16%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N++ F L++ A D+ E+ K M + GV ++ +N+++K C A A E++
Sbjct: 876 NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E G DVFTYSTIV + A ++ EDM+S G +PN +T+SSL++
Sbjct: 936 ---KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 408 CANAG-----------------------------------LVEQAMHLFEEMLQAGCEPN 432
AG +++A HL EEM+ GC+PN
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSI 490
+LL A + + + A L + K V Y+ D + ++ Q +
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEV-MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 1111
Query: 491 TN------TPNFVP-NSHYSSFDKRFSFK---------------PTTTTYNILMKACCTD 528
++ PN V N+ + K P T+N ++ A C
Sbjct: 1112 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKT 1171
Query: 529 YYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM-REDGMSPDVV 584
YRV L N ++ G +PN +++ L+ S + A +L+ M R+ G SPD++
Sbjct: 1172 -YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T I +SKR+ +A+ LF +M + P+ VTY ++ + ++ + E L +
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL- 1289
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
M K G+ LI+ +C+ DK
Sbjct: 1290 --MLKNGFDPGAITYGTLIDGFCKTGNLDK 1317
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 190/432 (43%), Gaps = 24/432 (5%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + K L A+R + + +PN++ T++ G C A
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH--GFCKANRVENA 284
Query: 278 IY--EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ E + ++ ++ + +++N + V M + G ++ +Y L+
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A E+ V+ + +G + + TY+ I+ VF + A +V + M+ G
Sbjct: 345 FCRVGDLDGAVEL---VRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ I +S++I+ AG + +A L E+M++ GC P+ C + L+ A +A D A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L R +++G D + S + H ++ + + P
Sbjct: 461 ELLR--------MSIGMDCAPDVVAYSILIH----ALCKAKRLPEAESWLDVMVKNRCYP 508
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN ++ C A L + MR G+ P+ ++++I+I + N++ A ++L
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+E PDVV Y+ I ++ + +AF +F+EM PNLVTY TL+ +
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628
Query: 632 GSLHEVQQCLAV 643
+ + + L +
Sbjct: 629 NKVEQAAEMLEI 640
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 187/406 (46%), Gaps = 38/406 (9%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
SPN+ +++ G+C G ++ A+ + + + NI +N++++ + L E
Sbjct: 980 SPNVVTYSSLLH--GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK-LGRIDE 1036
Query: 311 VYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
Y ++++ G ++ +Y +LL A C G A++ G V+ + KG + ++FTY+
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK---AEDAIGLVEVMVEKGYVP-NLFTYN 1092
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ +F + A ++ M+ G PN ++++++I A V + + L E+ML
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNM 482
C P+ N ++ A + + D A+ LF + + V G + R
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 483 EHKDKQSITN---TPNFVP--------------NSHYSSFDKRFS--FKPTTTTYNILMK 523
E+ ++ +P+ + + Y F + S P TY+I++
Sbjct: 1213 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ C + +A ++ M G P I++ LID +GN++ AL+IL+++ G P
Sbjct: 1273 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 1332
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DVV ++ I + RL+QA L E M + P+ VTY TLL+
Sbjct: 1333 DVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 1378
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 26/433 (6%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKS 275
VP+ IL ++ R L SAL + ++ S P+++ TI+D G +
Sbjct: 908 VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ED+ S+ + N+ ++SL++ A L + + M + G ++ +YN ++
Sbjct: 968 CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A + E+ G + +V TY+ ++ F + A+ + E M+ G
Sbjct: 1028 HCKLGRIDEAYHLLEEM----VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++SL++ VE+A L M+Q GC PN N ++ +A +
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
L LS V ++ D + D Y F+ +
Sbjct: 1144 LLLEQ-MLSNNCVPDIVTFNTIIDAMCKTYRVDIA-------------YELFNLIQESGC 1189
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN L+ C + + + L+ EM R G SP+ I++ +ID S V+ A
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M DG++PD V Y+ I + + + +A ++ E M P +TY TL+
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 1309
Query: 629 SRYGSLHEVQQCL 641
+ G+L + + L
Sbjct: 1310 CKTGNLDKALEIL 1322
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 184/438 (42%), Gaps = 40/438 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A R D + PN+ T++D G C GD + + + + N +N++
Sbjct: 319 ACRVMDKMIQRGCQPNVITYGTLVD--GFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
M+V +D++ +V + M + G D +Y+ ++ C AG +E + ++ +
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL---REAHDLLEQMIR 433
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G + DV ST++ A A ++ + P+ + +S LI+A A +
Sbjct: 434 RGC-RPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLP 492
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVA 467
+A + M++ C P+ N ++ ++ + + AF LF ++ + V
Sbjct: 493 EAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVI 552
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D N D M + K++ P TY+ L+ C
Sbjct: 553 HSFCKDNNLDSAFKMLERMKEA--------------------KCVPDVVTYSALINGLCK 592
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
KA + EM G +PN +++ LID VE A ++L+IMR+ +PD +
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I + RL++A+ + EMK P+ +TY TLLRA + +L V+Q L +
Sbjct: 653 YTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Query: 646 DMWKAGYKANDTYLKELI 663
+ + AN L +
Sbjct: 713 ATEEGQWNANGARLHRFV 730
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 61/391 (15%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+ N L+NV AH +++++ + D +Y+ L+ AG + A E++
Sbjct: 126 IFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFD 185
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA-LKVKEDMLSAGVTPNTITWSSLINA 407
E+ KG LK + +I++ DA A L +E +S P+++T++++IN
Sbjct: 186 EMNR---KG-LKAHAGVHKSILRGLCDAGQCSDAVLHFRE--MSKTCPPDSVTYNTMING 239
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ + ++ A+ L EEM+ G PN N +L +A + + A W L
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL-----WLL------ 288
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+Q +T P +Y ++ C
Sbjct: 289 -------------------EQMVTR-----------------GCPPDVVSYTTVINGLCK 312
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A +M++M G PN I++ L+D G+++GA+++++ M E G P+ +
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 372
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y + V R +++A + + M P+ + Y T++ + G L E L +
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL---E 429
Query: 646 DMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
M + G + + L LI+ C+ D Q
Sbjct: 430 QMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 127/626 (20%), Positives = 252/626 (40%), Gaps = 121/626 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEG---NVSKFASMLSLEMVASGIVKSIREGRID 130
Y+ + L K G++++ +VE +VS+G NV ++S+L G+ K+ G++D
Sbjct: 951 YSTIVDSLVKSGKVDDACRLVED-MVSKGCSPNVVTYSSLL------HGLCKA---GKLD 1000
Query: 131 CVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGEVEMFVGL 177
+L+++ G +P + DG + LL + ++D G V
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL----EEMVDGGCQPNVVTY 1056
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+L+ F + ++ +V++ V K V Y ++ +FC KK ++
Sbjct: 1057 TVLLDAF-CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD----MFC-------KKDEV 1104
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFN 295
A + + + PN+ T+I G+C + E + S N +I FN
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSYNTVI--AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++++ + + E++ +Q+ G ++ +YN L+ C + A+ + ++ +
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL---LREM 1219
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
K D+ TY+T++ +K A K+ MLS G+ P+ +T+S +I++
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++A ++ E ML+ G +P + L+ + D+A + + LSK +
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVTFS 1338
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
D +S + +Q+ + R P T TYN L+K C
Sbjct: 1339 IFIDWLSK-RGRLRQAGELLETML----------RAGLVPDTVTYNTLLKGFCDASLTED 1387
Query: 534 A--LMNEMRTVGLSPNHISWTIL------------------------------------- 554
A L MR G P++ ++T L
Sbjct: 1388 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLE 1447
Query: 555 ---------------IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+D G G+ + A ++ + M + +VV ++ + V V K+
Sbjct: 1448 ASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQE 1503
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
+QAF L+ M ++P+ VT+++LL
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLL 1529
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 146/621 (23%), Positives = 248/621 (39%), Gaps = 74/621 (11%)
Query: 57 TALLSTVRRDLSSRNDY-YADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSL 113
TALL + R S N Y + K GR++E ++E +V + NV + +L
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD- 1061
Query: 114 EMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL--KNECQR------- 164
+ G+ + +G+++ + E G P S + K+E +R
Sbjct: 1062 --------AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK--PDV---NLAIRYACIVPR 219
++ G V V V+ K + + Q+ N PD+ N I C R
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 220 ADILF--CNFVREFGKKRDLVS---------ALRAYDA--------SKKHLSSPNMYICR 260
DI + N ++E G +LV+ R +D ++K SP++
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 261 TIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
T+ID G+C RA + + L +VT +I V +SL D V +
Sbjct: 1234 TVID--GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI-VISSLCKWRFMDEANN--VLE 1288
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M K G +Y L+ C GN A EI ++ L +KG DV T+S +
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI---LQLLLSKGSYP-DVVTFSIFIDWL 1344
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A ++ E ML AG+ P+T+T+++L+ +A L E A+ LFE M Q GCEP++
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
L+ V+ + + S ++ T L + + +E +
Sbjct: 1405 ATYTTLVGHLVDKKSY-KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIV 1463
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPN 547
F S D R F+ +L A Y K L M G+ P+
Sbjct: 1464 DMF--GKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPD 1521
Query: 548 HISWTILIDACGGSGNVEGAL-QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ L+ C +G ++ A+ + + I R+ G+ P V ++ I + R + +A L
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
M +P+ T+ LL A
Sbjct: 1582 LGMP---CKPSAATWNCLLSA 1599
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI------YE 280
+ K + L A D K+ P++ +++D G+C KSR I ++
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD--GLC----KSRRINDAFLLFD 534
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+R+ V ++ ++ +++ D L ++ + M++ + D+ +Y+ L+ C AG
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ E+ ++ TY+T++ + A ++ E M TP++
Sbjct: 595 TVDKAFDVFQEMLGCGCAP----NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
IT++ LIN NA +E+A + EM GC P+ LL+A
Sbjct: 651 ITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVT-----LNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
I+D+ G CG +R ++E + +NV L +YVF+ + F L ++ M
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFH-----KQEEQAFGL--WRVMG 1514
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
GV D ++ LL CC AG L E + L+ V +S ++ +
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAG---LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR- 1570
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ + ++ ML P+ TW+ L++A G E+A+ + E
Sbjct: 1571 --LGLVNEAEDLMLGMPCKPSAATWNCLLSAYKICGDFERALRVAE 1614
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 193/484 (39%), Gaps = 88/484 (18%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 469 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 524
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 577
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 578 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 613
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 614 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 673
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 674 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 733
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
QPN+VTY ++ +G + +++ CL + + M G N + LI+ C+ D
Sbjct: 734 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 790
Query: 674 KNQN 677
N
Sbjct: 791 VAHN 794
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 57/440 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 536
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ YD D + + D+
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV----YDALIDGLCKVGKLDEA 652
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
T F T TY+ L+ Y++VK ++++M
Sbjct: 653 QEVKTEM-----------SEHGFPATLYTYSSLIDR----YFKVKRQDLASKVLSKMLEN 697
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+PN + +T +ID G + A +++++M E G P+VV YT I +++
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 757
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWK---AGY-KANDT 657
L E M + PN VTY L+ + G+L L + Q W AGY K +
Sbjct: 758 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 817
Query: 658 YLKELIEEWCEGVIQDKNQN 677
+ KE IE G++ + Q+
Sbjct: 818 FNKEFIESL--GLLDEIGQD 835
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 183/482 (37%), Gaps = 120/482 (24%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 333 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 379
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 380 -----KDSLNFDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 419
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 420 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 468
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 469 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 492
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 552
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG---FC 609
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEV---------- 681
H V++ + M G + N LI+ C+ G + + + + E+
Sbjct: 610 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 669
Query: 682 ---TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRMM 735
+L R + Q L + ++ L+ S A N+ I + GL KV +++MM
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Query: 736 KE 737
+E
Sbjct: 730 EE 731
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 64/380 (16%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 179 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 234
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 235 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 291
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 292 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 325
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRV-- 532
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385
Query: 533 ------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + + +++ AF LFEEMK + ++ TY ++ + + G ++Q + +
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL---IEQARKWFNE 502
Query: 647 MWKAGYKANDTYLKELIEEW 666
M + G N LI +
Sbjct: 503 MREVGCTPNVVTYTALIHAY 522
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 572 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 631
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 632 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 687
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 743
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 744 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 682 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 737
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 797
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 798 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 857
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 858 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 914
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 507 KRFSFKPTTTTYNILMKACC-TDYYRVKALMN-EMRTVGLSPNHISWTILIDACGGSGNV 564
K F F+P+ +TYN L++A D +L++ EM L + + + G
Sbjct: 186 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 245
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL +++ + PD V YT I + ++A M+ PN+VTY TL
Sbjct: 246 REALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 302
Query: 625 LRARSRYGSLHEVQ--QCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L G L++ Q +C V M G + L+ +C
Sbjct: 303 L-----CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 342
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 195/452 (43%), Gaps = 51/452 (11%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G +++ +S LR + PN T++ G+ ++ + + +R + N+
Sbjct: 171 GHRKEALSVLRDMRGAG---CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNL 227
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FNS++N A ++ +V+ M K G+ D SYN L+ C G + A ++ E
Sbjct: 228 VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ KG++ DV T+++++ V A + A+ + +M G+ N IT+++LI+
Sbjct: 288 MTR---KGIMP-DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFC 343
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G ++ A+ EM Q +P+ C N L+ + D A L R
Sbjct: 344 KKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE----------- 392
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTY 518
ME K + T + + +++ + D +F+ P TY
Sbjct: 393 ------------MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ L++ C + A L M ++GL P+ +++T LID GNVE AL + M +
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y+ I +S R K+A L ++ H + P + Y L+R E
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRN----AE 556
Query: 637 VQQCLAVYQDMWKAGY--KANDTYLKELIEEW 666
++ LA+ + G +A+ Y L W
Sbjct: 557 LKSVLALLKGFCMKGLMNEADKVYQSILDRNW 588
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 159/383 (41%), Gaps = 59/383 (15%)
Query: 290 NIYVFNS-LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+ L+ ++ L + +M GV ++ +YNIL++A C G+ +E
Sbjct: 122 SVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR---KEALS 178
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ + G + TY+T+V F A A ++ + M G+ PN +T++S++N
Sbjct: 179 VLRDMRGAGC-DPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVA 467
AG +E A +F+EM++ G P+ N L+ C C + A +F T
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHE-ALSVFAEMT------- 289
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
R P T+ L+ C
Sbjct: 290 ----------------------------------------RKGIMPDVVTFTSLIHVMCK 309
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ R L+ EMR GL N I++T LID G ++ AL ++ MR+ + P VV
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I R+ +A L EM+ ++P++VTY T+L A + G H Q + Q
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ---LNQ 426
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
M + G + LI CE
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCE 449
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ IL+ A G G+ + AL
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ MR G P+ V Y T + R+ + +A L + M+ ++PNLVT+ +++
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G + + ++ V+ +M K G + L+ +C+
Sbjct: 238 CKAGRMEDARK---VFDEMVKEGLAPDGVSYNTLVGGYCK 274
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 160/369 (43%), Gaps = 13/369 (3%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I F + F KK L AL A ++ P++ +I+ + G ++R +
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V ++ ++++++ D ++ + M + GV+ D +Y+ L++ C
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ K++ + G L+ D TY++++ + AL + ++M+ AGV P+
Sbjct: 452 RLGDAHVLF---KNMISLG-LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV 507
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+S LIN + + ++A L ++ P + + L++ C A + L +
Sbjct: 508 VTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA-ELKSVLALLKG 566
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---SFKPT 514
+ + + Y DR N++ + + N + SF K+ F P
Sbjct: 567 FCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPN 626
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+T+ L++ V+A ++ ++ + + LID GNV+ L +L
Sbjct: 627 STSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLH 686
Query: 573 IMREDGMSP 581
M DG+ P
Sbjct: 687 GMARDGLLP 695
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 29/405 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 449 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 508
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 509 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 564
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 565 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 624
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 625 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 669
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 670 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 729
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 730 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 789
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 790 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMGIKPD 831
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 479 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 538
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 539 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 594
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 595 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 654
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 713
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 714 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 755
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 756 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 815
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 816 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 868
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 191/464 (41%), Gaps = 63/464 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 302 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 361
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 362 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 421
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 422 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 480
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 481 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 540
Query: 457 RSWTLS--KTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSS 504
K V L + + NM+ K+ Q + + P F+P + + S
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 600
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
D R S + PT T+N L+ KA +++EM G+S N ++
Sbjct: 601 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 660
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 661 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 720
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I N Y L+ +R G + E + Q M K G K +
Sbjct: 721 RNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 761
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 612
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 672
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 673 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 728
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 729 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 781
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 782 ----------------TQTIEEME------------------------ALGVKPNIKTYT 801
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 802 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 861
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 862 KEMVEAGLIVDM 873
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 21/291 (7%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ + E + P+ + ++ G + +A FE M G P S+
Sbjct: 292 WQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 347
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A D A R +++L Y S H +
Sbjct: 348 LIHAYAVGRDMDEALSCVRKMKEEGIEMSL-VTYSVIVGGFSKAGHAEAAD--------- 397
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
++ KR + Y ++ A C + R +AL+ EM G+ + ++D
Sbjct: 398 --YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 455
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + L + K ++E G +P VV Y I + + ++ +A + MK ++
Sbjct: 456 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 515
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
NL TY ++ + L + AV++DM K G K + +I +C
Sbjct: 516 NLKTYSMMING---FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 563
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 182/412 (44%), Gaps = 47/412 (11%)
Query: 286 NVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
NV L++Y F ++ V D F EV M+++G+ ++ Y L+ CC G+
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGF--EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++++ ++ L+ + +TY+ ++ F + +++ E M G+ PN T+
Sbjct: 217 RGKQLFYKMGELDVVA----NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
+S+I C N G + A LF+EM + G N N L+ + + A RL +
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 459 WTLSKTQVALGEDYDG-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LS ++ DG N D+ S++ ++ K S P
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS--------------------GQSP 372
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYNIL+ + V ++ EM GLSP+ +++TIL+DA S N+E A QI
Sbjct: 373 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + G+ D+ Y I +K+A LF+ + ++PN V Y T++ +
Sbjct: 433 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 492
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
GS + + L + ++M + G N I+ C +D+ + EV L
Sbjct: 493 GSSY---RALRLLKEMGENGMVPNVASYNSTIQILC----KDEKWTEAEVLL 537
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 177/383 (46%), Gaps = 26/383 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + T+ID C GD + + ++ + +V N Y + L+N K +E
Sbjct: 196 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 255
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ G++ ++ +YN ++ CC G A E++ E++ +GV +V TY+T++
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE---RGV-ACNVVTYNTLI 311
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ M G++PN I++++LI+ + G +++A LF +M +G
Sbjct: 312 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ NIL+ EA R + LS ++V D R N+E +
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV-RSDNIEKAFQ 430
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
YSS +K Y +L+ C D L + + L
Sbjct: 431 I-------------YSSMEKA-GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 476
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++LK M E+GM P+V +Y + I++ + ++ +A L
Sbjct: 477 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVL 536
Query: 606 FEEMKHYQIQPNLVTYITLLRAR 628
++M ++P++ + + +AR
Sbjct: 537 LKDMIELGLKPSISIWNMISKAR 559
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 133/318 (41%), Gaps = 21/318 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG +KLDV+++ ++K + + +V M G++PN + +++LI+ C G
Sbjct: 155 ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 214
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+ LF +M + N +L+ F L K + L E
Sbjct: 215 IERGKQLFYKMGELDVVANQYTYTVLING-------------FFKMGLKKDGIELYEKMK 261
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
T + N+ + + N+ + FD + TYN L+ C +
Sbjct: 262 -LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 320
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++A LM M+ GLSPN IS+ LID GN++ A + M+ G SP + Y
Sbjct: 321 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 380
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I +K + EM+ + P+ VTY L+ A R + +++ +Y M K
Sbjct: 381 IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN---IEKAFQIYSSMEK 437
Query: 650 AGYKANDTYLKELIEEWC 667
AG A+ LI C
Sbjct: 438 AGLVADIYIYGVLIHGLC 455
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 110/249 (44%), Gaps = 45/249 (18%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R ++ A R K+ SPN+ T+ID G C G+ K+ +++ ++S + +
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLID--GYCSIGNLDKASSLFNQMKSSGQSPS 373
Query: 291 IYVFNSLMN-------------------------------------VNAHDLKFTLEVYK 313
+ +N L+ V + +++ ++Y
Sbjct: 374 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 433
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K G++AD+ Y +L+ C+ G+ A +++ + + LK + Y+T++ +
Sbjct: 434 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH----LKPNDVIYNTMIYGY 489
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL++ ++M G+ PN +++S I +A L ++M++ G +P+
Sbjct: 490 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSI 549
Query: 434 QCCNILLQA 442
N++ +A
Sbjct: 550 SIWNMISKA 558
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 52/430 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 286
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 407 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ RL A + +M PN+VTY ++ R G E ++ L + M + G
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG---ESEKALKLLSLMEEKGCSP 582
Query: 655 NDTYLKELIE 664
N LI+
Sbjct: 583 NVVTYTALID 592
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 43 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 96 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 469 --------GEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 396 YGALVDGLCKAGNI 409
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 532
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 533 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 569
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 594 VRSKRLKQAFSLFEEMKH 611
+ L +A L EMK
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 180/468 (38%), Gaps = 77/468 (16%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 432 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 545
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 644
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
KQ T P ++ Y ++ + ++ EM
Sbjct: 645 ------MKQ--TYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 678
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----------YGSLHEVQQCLAVYQD 646
++++AF L+ EM P L ++ L++ YG HEV L+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQ 798
Query: 647 MW-------KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRT 687
++ GY N +L + + + N +CR +
Sbjct: 799 IFLFTFVVIVVGYGKNIEPQVDLGDSFSSFTVSASASNLKTAVICRHS 846
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 650
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 651 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 705 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 507 KRFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F ++P+ TYN L++ + +RV+ EM G + + A
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ---KEMSESGFCMDRFTVGCFAHALCKE 88
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G AL +++ RED D V T I + + +A S M+ PN+VTY
Sbjct: 89 GRWADALDMIE--RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TLL S + ++ C + M G N + L+ +C
Sbjct: 146 RTLL---SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 191/415 (46%), Gaps = 33/415 (7%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
D + HL S PN+ +I ++ + E++R + N+ +N L++
Sbjct: 42 DGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 101
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ +V K M + G ++ ++N L+ C GN A+++ G + AKG
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG---IMVAKG- 157
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ +V TYS ++ ++ + A +V E+M ++GVTP+ T+S+LI+ A +E+A
Sbjct: 158 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAE 217
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQF---DRAFRLFRSWTLSKTQVALGEDYDG- 474
+ M +GC P+ + ++ A ++ + + + R S V DG
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+I+ + + + S D P TY+ ++ C V+
Sbjct: 278 CKLGKIAEAQ------------VILDQMQESGD----VLPDVVTYSTVINGLCKSDMLVE 321
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L++ M G +P+ +++T +ID G +E A +L+ M+ G +P+VV YTT I
Sbjct: 322 AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLIS 381
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+++++ +A + EEM++ PNLVTY T++ G + E QQ + +D
Sbjct: 382 GLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 436
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 56/348 (16%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
NA DL LE+ + M+ G D ++ ++ A AG+ + G + HL + G
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD------LDGAMDHLRSMGC-D 54
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ FA AK + A+K+ E+M G PN +T++ L++A +V A +
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
++M++ G PN N L+ + D A +L VA G
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL------GIMVAKG----------- 157
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+P TY+ L+ C + K ++ E
Sbjct: 158 ------------------------------MRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G++P+ +++ LI + +E A Q+L+ M G +PDVV Y++ I +S +
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L +A +EM+ + P++VTY T++ + G + E Q L Q+
Sbjct: 248 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 148/356 (41%), Gaps = 66/356 (18%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG+ A E+ E+K D FT++ I+ A+A A+ + + S G
Sbjct: 1 CNAGDLHAALELLEEMKS----AGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGC 53
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T+++LI A A A +E+AM L EEM + GC PN N+L+ A
Sbjct: 54 DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA------------ 101
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L + + Q + + +G F P
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGG-----------------------------------FAPN 126
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+N L+ C + + L+ M G+ PN ++++ LID S A ++L+
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G++PD Y+ I ++ ++++A + M P++V Y +++ A + G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-------GVIQDKNQNQGEV 681
L E Q+ L Q+M K + +I+ C+ VI D+ Q G+V
Sbjct: 247 KLLEAQKTL---QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 155/366 (42%), Gaps = 64/366 (17%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C +++++ + E++++ VT + + +++L++ A ++
Sbjct: 160 PNVVTYSALID--GLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAE 217
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M G D+ Y+ ++ A C +G + AQ+ E++ K DV TY+T+
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR----KQRKSPDVVTYNTV 273
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ A + + M +G V P+ +T+S++IN + ++ +A L + M +AG
Sbjct: 274 IDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 333
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ ++ + + + A L +
Sbjct: 334 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM----------------------------- 364
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
KR P TY L+ C + +M EMR G P
Sbjct: 365 ------------------KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 406
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDG---MSPDVVAYTTAIKVCVRSKRLKQAF 603
N +++ +++ SG ++ A Q+++ M+ DG SPD Y T + + S +++A
Sbjct: 407 NLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSSDLVQEAE 465
Query: 604 SLFEEM 609
L E+M
Sbjct: 466 QLLEQM 471
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + + F K L+ A + +K SP++ T+ID G+C G +++ I
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID--GLCKLGKIAEAQVIL 290
Query: 280 EDLR-SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ S +V ++ +++++N + L ++ M K G D+ +Y ++ C
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ + +K + +V TY+T++ A+ A +V E+M +AG P
Sbjct: 351 CGRLEEAEYLLQGMK----RAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 406
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML--QAGCEPNS 433
N +T+++++N +G +++A L + M +A C P++
Sbjct: 407 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 445
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V +F ++ M+ G D+ ++ ++++ C AG
Sbjct: 238 EMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAG 297
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ Q +++ M++ G N
Sbjct: 298 RLSDAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNI 353
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++++++A G +++A+ +F+EM + G P N L+ ++A FDRA LF
Sbjct: 354 VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNH 413
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
A G +G T + N K QS+ + H K P
Sbjct: 414 MN------ACGPSPNGYTHVLFINYYGKSGQSLKAIQRY---EHM----KSKGIVPDVAA 460
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ + K + E++ +G+SP+ I++T++I C + + A+ M
Sbjct: 461 ANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 520
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G PDV+A + I + + +A+ LF ++K +I+P TY TLL R G +
Sbjct: 521 ETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVK 580
Query: 636 EVQQCL 641
EV L
Sbjct: 581 EVMHLL 586
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 196/447 (43%), Gaps = 58/447 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A + N+ ++D G ++ A++++
Sbjct: 319 VTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDE 378
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + ++ Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 379 MKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 438
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y +H+++KG++ DV + ++ A + MA +V ++ GV+P+TI
Sbjct: 439 SLKAIQRY---EHMKSKGIVP-DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTI 494
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM+ F +M++ GC P+ N L+ + + + A++LF
Sbjct: 495 TYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQL 554
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K +PT TYN
Sbjct: 555 -----------------------------------------------KEMKIEPTNGTYN 567
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM PN I++ ++D +G V A+ +L M E
Sbjct: 568 TLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G +PD+ +Y T + ++ +R ++AF +F +MK + P+ T T+L + + G + E
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEA 686
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIE 664
+ Y + KA + + L+E
Sbjct: 687 LHTVKEY--ILKADCNTDKSSFHSLME 711
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 134/613 (21%), Positives = 252/613 (41%), Gaps = 134/613 (21%)
Query: 71 NDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRID 130
N Y + S L ++G+++E ++E + S ++++ V + K+ G ++
Sbjct: 563 NGTYNTLLSGLGREGKVKEVMHLLEEMTHS----IHPPNLITYNTVLDCLSKN---GEVN 615
Query: 131 CVVGVLKKLNELGVAP-LELFDGSGFKLLKNE---------CQ--RLLDSGEVEM----- 173
C +G+L + E G P L ++ + L+K E CQ ++L +
Sbjct: 616 CAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILP 675
Query: 174 -FV--GLM-EVLEEFRLPVKELD-----EEFR-IVQLCVNKPDVNLAIRYACIVPRADIL 223
FV GLM E L + + + D F +++ +NK V +I +A + IL
Sbjct: 676 SFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGIL 735
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+F ++C I +C +++ ++ +
Sbjct: 736 LNDF-----------------------------FLCPLIRHLCK-HKKALEAHQLFNKFK 765
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+L +NSL+ V+ + + +++ M++LG D +YN++L A G ++
Sbjct: 766 GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA---MGKSM 822
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ + KG V TY+TI+ +K + A+ + +++S G +P T+
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYV-TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTY 881
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
L++ AG + A +LF EML+ GC+PN NILL
Sbjct: 882 GPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLN-------------------- 921
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G GNT+ + + K + N P +Y +L
Sbjct: 922 -------GHRIAGNTENVCQIFEKMVEQGIN--------------------PDIKSYTVL 954
Query: 522 MKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ CT Y+R ++ +GL P+ I + +LID G S +E A+ +
Sbjct: 955 IDTLCTAGRLNDGLSYFR------QLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNE 1008
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ G+ P++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS
Sbjct: 1009 MKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGS 1068
Query: 634 L---HEVQQCLAV 643
+ C+AV
Sbjct: 1069 TDNAYAAYDCVAV 1081
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P+ TY++LM + D V L+NEM G+ PN S+TI I G + + A
Sbjct: 208 GISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 267
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
QIL M + G PDVV +T I+V + RL A +F +MK +P+ VTYITLL
Sbjct: 268 YQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLL-- 325
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G + Q + ++ M GY N +++ C+
Sbjct: 326 -DKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQ 365
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/480 (20%), Positives = 179/480 (37%), Gaps = 57/480 (11%)
Query: 216 IVPRADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
IVP D+ N V + L A R + K SP+ +I C +
Sbjct: 454 IVP--DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADE 511
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ + D+ ++ NSL++ K +++ ++++ + +YN LL
Sbjct: 512 AMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLS 571
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G + E+ H + ++ TY+T++ + A+ + M
Sbjct: 572 GLGREGKVKEVMHLLEEMTH----SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++++ E+A +F +M + + C I L + V+ A
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTI-LPSFVKNGLMKEA 686
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISN---MEH-KDKQSITNTPNFVPN--------- 499
+ + L D NTD+ S ME +K + + F N
Sbjct: 687 LHTVKEYILKA---------DCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLN 737
Query: 500 ------------SHYSSFD--------KRFSFKPTTTTYNILMKACCTDYY--RVKALMN 537
H + + K T +YN L++ + + L
Sbjct: 738 DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFT 797
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ +G P+ ++ +++DA G S +E L++ M G V Y T I V+SK
Sbjct: 798 EMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSK 857
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
RL+QA L+ + P TY LL + G + + + ++ +M + G K N T
Sbjct: 858 RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAEN---LFNEMLEYGCKPNCT 914
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR G+S N ++ LI SG A+++ K M EDG+SP V Y+ + + +
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ L EM+ ++PN+ +Y +R + E Q L +D
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMED 276
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 42/202 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++ I +ID G ++ ++ +++ + + N+Y +NSL+ L + K
Sbjct: 981 PDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLI----------LHLGK 1030
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
AG A ++Y E L KG K +VFTY+ +++ +
Sbjct: 1031 -----------------------AGKASEAAQMYEE---LLIKG-WKPNVFTYNALIRGY 1063
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A D ++ GV+ T +LI+ + L+ A LF EM + GC P+
Sbjct: 1064 SVSGSTDNAYAAY-DCVAVGVSLKT----ALISGLVDENLINIAEGLFAEMKRRGCGPDQ 1118
Query: 434 QCCNILLQACVEACQFDRAFRL 455
N++L A ++ + + ++
Sbjct: 1119 FTYNLILDAIGKSMRIEEMLKV 1140
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 206/467 (44%), Gaps = 47/467 (10%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR--AYDASKKHLSSPNMYICRTIID 264
VN + C+ D + N + + KR L+ R D K LS PN + +
Sbjct: 236 VNKMSEFGCV---PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLS-PNKHTYNML-- 289
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
VCG C G ++ + E + N+ ++ +N L+N +D K + M+K+ V
Sbjct: 290 VCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNV 349
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D+ +YN L+ C + + E+Y ++ ++ KGV K + TY+ I+K
Sbjct: 350 LPDVVTYNTLIDGCSQWRD---SSEVYSLIEEMDKKGV-KCNAVTYNIILKWMCKKGNMT 405
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + M G++P+ +T+++LI A AG + +A + +EM G + ++ N +L
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTIL 465
Query: 441 QA-CVEACQFDRAFRLF-----RSWTLSKTQ---VALGEDYDGNTDRISNM--EHKDKQS 489
CVE + D A+ L R + L + + LG D DR N+ E K++Q
Sbjct: 466 HCLCVEK-KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQI 524
Query: 490 ITNTPNFVPNSHYS----------SFDK-----RFSFKPTTTTYNILMKACCTDYYRVKA 534
+ +T + NS + DK P TTYNI++ C + KA
Sbjct: 525 MPSTITY--NSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKA 582
Query: 535 LM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
NEM P+ + IL+ G +E AL++ + G DVV Y T I
Sbjct: 583 FQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISS 642
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + A+ L EM+ ++ P+ TY ++ A + G + E ++
Sbjct: 643 LCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 58/356 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
I+ ++ N N+ N+LMN ++ + +V K+ KLGV+ + S+NIL+
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL ++ V + G + D +Y+TI+ + Q A + DM S
Sbjct: 222 GYCLESK---VKDALDWVNKMSEFGCVP-DTVSYNTILDALLKRRLLQEARDLLLDMKSK 277
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G++PN T++ L+ GL+++A + E M + P N+L+ + D A
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
FR+ +D+ ++ +
Sbjct: 338 FRI-----------------------------RDEM------------------EKMNVL 350
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C D V +L+ EM G+ N +++ I++ GN+ A
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT 410
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
L M E+G+SPD V Y T I ++ ++ +AF + +EM ++ + T T+L
Sbjct: 411 LDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILH 466
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/604 (18%), Positives = 228/604 (37%), Gaps = 125/604 (20%)
Query: 52 VHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASML 111
+ ++ LL + LS Y + + G L+E ++E +++ N+ ++
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIE--IMTRNNL--LPTVW 319
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV 171
+ M+ +G +G+ID + ++ ++ V P D + L + C + DS EV
Sbjct: 320 TYNMLVNGFC---NDGKIDEAFRIRDEMEKMNVLP----DVVTYNTLIDGCSQWRDSSEV 372
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
+ +E+D++ + N N+ +++ C
Sbjct: 373 YSLI-------------EEMDKK----GVKCNAVTYNIILKWMC---------------- 399
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
KK ++ A D +++ SP+ T+I G K+ + +++ S+ + ++
Sbjct: 400 -KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458
Query: 292 YVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N++++ + K E Y + K G + D SY IL+ A ++
Sbjct: 459 WTLNTILHCLCVEKKLD-EAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWD 517
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K + + TY++++ ++ A+ +ML G+ P+ T++ +I+
Sbjct: 518 EMKERQ----IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGF 573
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G VE+A EM++ +P+ CNILL+ ++A +LF T V+
Sbjct: 574 CLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFN------TLVSK 627
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+D D TYN ++ + C +
Sbjct: 628 GKDID-----------------------------------------VVTYNTIISSLCKE 646
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD---- 582
+ L+ EM L P+ ++ ++I A +G ++ A + M E G+ D
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLK 706
Query: 583 -------------------VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+AY+ I + K A LF E+ + N TY+
Sbjct: 707 LGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLN 766
Query: 624 LLRA 627
L+
Sbjct: 767 LMEG 770
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +F +M + PN CN L+ + V ++ + + + + K + LG + N+
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLV---RYPSSSSILLARQVLKDSIKLGVVPNTNS 215
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
I + + + + ++V F P T +YN ++ A +
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKM------SEFGCVPDTVSYNTILDALLKRRLLQEARD 269
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +M++ GLSPN ++ +L+ G ++ A ++++IM + + P V Y +
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++ +AF + +EM+ + P++VTY TL+ S++ EV ++ ++M K G K
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEV---YSLIEEMDKKGVKC 386
Query: 655 N 655
N
Sbjct: 387 N 387
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 61/334 (18%)
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA +I+ ++K L + L +++V+ + + +A +V +D + GV PNT ++
Sbjct: 158 LATQIFNKMKRLNYRPNLLTCNTLMNSLVR-YPSSSSILLARQVLKDSIKLGVVPNTNSF 216
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI V+ A+ +M + GC P++ N +L A ++ A
Sbjct: 217 NILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA--------- 267
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D + +M+ K PN H TYN+L
Sbjct: 268 --------------RDLLLDMKSK---------GLSPNKH---------------TYNML 289
Query: 522 MKACCTDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ C R+ L + + L P ++ +L++ G ++ A +I M
Sbjct: 290 VCGYC----RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PDVV Y T I C + + + +SL EEM ++ N VTY +L+ + G++
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
E L M + G + LI +C+
Sbjct: 406 EATTTL---DKMEENGLSPDCVTYNTLIGAYCKA 436
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 189/426 (44%), Gaps = 35/426 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C T++++ GI + ++ + ++ L +F L +A L+ ++E
Sbjct: 17 PSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEA 76
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+ ++YN L+ A AG T A +Y + + L+ D +T++ ++
Sbjct: 77 LKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY----RVMGQSGLRPDTYTFNVLMN 132
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F AK K+ E+M + +PN IT+S LI+A G VE+A+ +F +M GC P
Sbjct: 133 AFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP 192
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL-----GEDYDGNTDRISNME 483
N ++ ++ D+AF LF T L T+V G G D + +
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL- 251
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
++ S P+ V +F T+ Y + + ++ R+ E R VG
Sbjct: 252 FREMLSKGLQPDHV------TF--------TSLVYGLGVAGRASEARRI---FQEARDVG 294
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ + + +LID S ++ A +I + EDG+ PDV + + +S R+ AF
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L +MK P++ Y TL+ + G + E Q L +M GY+ + LI
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLL---EMQSLGYEPDVVTYNTLI 411
Query: 664 EEWCEG 669
+E C+G
Sbjct: 412 DESCKG 417
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 180/428 (42%), Gaps = 34/428 (7%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
PR +F R + L ++ A + H + ++ID G K+ A
Sbjct: 54 PR---IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALA 110
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y + + + Y FN LMN A + ++++ MQ ++ +Y+IL+ A C
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +++ ++K ++G + ++FTY++++ + A + E+M S G+
Sbjct: 171 KCGGVEKALKVFLDMK---SRGC-RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++SLI+ +G + A LF EML G +P+ L+ A + A R+
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286
Query: 456 FRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFS 510
F+ V D Y+ D + + D+ + F +
Sbjct: 287 FQ----EARDVGCALDVNLYNVLIDTLCKSKRLDEA-------------WEIFGELEEDG 329
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P T+N LM C + L+ +M+ G +P+ + LID SG VE A
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
Q+L M+ G PDVV Y T I + R++ A LFEE+ N VTY T+L
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGL 448
Query: 629 SRYGSLHE 636
G + E
Sbjct: 449 CMAGRVDE 456
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P++Y ++D G+C G + + D++ T ++ V+N+L++ + ++
Sbjct: 332 PDVYTFNALMD--GLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ MQ LG D+ +YN L+ C G A ++ E+ AKG + TY+TI
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI---SAKGFA--NTVTYNTI 444
Query: 370 VKVFADAKWWQMALKV----KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ A A K+ K++ + + P+ +T+++L+N AGL E A L
Sbjct: 445 LNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 135/326 (41%), Gaps = 43/326 (13%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSI-REGRIDCV 132
Y M L K G +++ + E + SEG +++ +V + ++ + R GR D
Sbjct: 197 YTSMIDGLGKSGHVDKAFFLFEEMT-SEG-------LVATRVVYNSLIHGLGRSGRADAA 248
Query: 133 VGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGE---VEMFVGLMEVLEEF 184
+ +++ G+ P L G G +E +R+ + V L VL +
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
K LDE + I + +VP D+ N + + L + R +
Sbjct: 309 LCKSKRLDEAWEIFG----------ELEEDGLVP--DVYTFNALMD-----GLCKSGRIH 351
Query: 245 DA------SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA K+ +P++ + T+ID G ++ + +++S ++ +N+L+
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ ++ L +++ + G A+ +YN +L C+AG A +++ +K
Sbjct: 412 DESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVD 470
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMA 382
GV+ D TY+T++ A ++A
Sbjct: 471 GVIDPDFVTYTTLLNGARQAGLSELA 496
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 213/504 (42%), Gaps = 82/504 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 244 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 303
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 304 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 363
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 364 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 423
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 424 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 479
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 536
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 537 --------------------------------------------KEMNLEPTDGTYNTLL 552
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 553 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 613 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 671
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+ Y + G K + + L+E
Sbjct: 672 IKDY--FLQPGSKTDRSSCHSLME 693
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 57/447 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 205 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 241
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 242 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 292 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 347
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 348 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 401
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 402 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 454
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L ++M
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL---EEM 571
Query: 648 WKAGYKANDTYLKELIEEWCE-GVIQD 673
+ + Y N +++ C+ G + D
Sbjct: 572 YHSNYPPNLITYNTILDCLCKNGAVND 598
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 182/417 (43%), Gaps = 72/417 (17%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 720 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 778
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 779 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 834
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 835 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 895 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 923
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGL 544
P +Y I++ C Y+R ++ +GL
Sbjct: 924 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFR------QLLEMGL 961
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A
Sbjct: 962 EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1021
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLK 660
++EE+ +PN+ TY L+R S GS A Y M G N TY++
Sbjct: 1022 MYEELLTKGWKPNVFTYNALIRGYSVSGS---TDSAYAAYGRMIVGGCLPNSSTYMQ 1075
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 149/341 (43%), Gaps = 58/341 (17%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV+ MQ+ V A++ ++ + + G A + ++ G++ L+ +TY+ +
Sbjct: 111 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPV---ALPVMKEAGIV-LNAYTYNGL 166
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + + + AL+V M+ GV P+ T+S L+ A VE + L EM G
Sbjct: 167 VYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV 226
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN I ++ +A +FD A+R+ ++ ME++
Sbjct: 227 KPNVYSYTICIRVLGQAKRFDEAYRI-----------------------LAKMENE---- 259
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---KALMNEMRTVGLSP 546
KP T+ +L++ C D R+ K + +M+ P
Sbjct: 260 --------------------GCKPDVITHTVLIQVLC-DAGRISDAKDVFWKMKKSDQKP 298
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ L+D G +G+ + ++I M+ DG + +VVAYT I + R+ +A +F
Sbjct: 299 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 358
Query: 607 EEMKHYQIQPNLVTYITLLRA---RSRYGSLHEVQQCLAVY 644
+EMK I P +Y +L+ R+G E+ + + ++
Sbjct: 359 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH 399
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 152/368 (41%), Gaps = 52/368 (14%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ G++ + +YN L+ +G A E+Y + + GV+ V TYS ++ F
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---RVMMVDGVVP-SVRTYSVLMVAFG 206
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + L + +M + GV PN +++ I A ++A + +M GC+P+
Sbjct: 207 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 266
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-------EHKDK 487
+L+Q +A + A +F W + K+ D DR++ + ++ D
Sbjct: 267 THTVLIQVLCDAGRISDAKDVF--WKMKKS--------DQKPDRVTYITLLDKFGDNGDS 316
Query: 488 QSITNTPNFVPNSHYSS------------------------FD--KRFSFKPTTTTYNIL 521
QS+ N + Y+ FD K+ P +YN L
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + L M G PN + + I+ G SG A+Q ++M+ G+
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 436
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVA + +S RL A +F E+K + P+ +TY +++ S+ E
Sbjct: 437 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA-- 494
Query: 640 CLAVYQDM 647
+ ++ DM
Sbjct: 495 -VKIFYDM 501
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ TY++LM A D V L+ EM G+ PN S+TI I G + + A +I
Sbjct: 193 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 252
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M +G PDV+ +T I+V + R+ A +F +MK +P+ VTYITLL +
Sbjct: 253 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---DK 309
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+G + Q + ++ M GY N +I+ C+
Sbjct: 310 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 347
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ ++++L+ A G +VE L +L+ M G+ P+V +YT I+V ++KR
Sbjct: 186 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 245
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A+ + +M++ +P+++T+ L++ G + + + V+ M K+ K +
Sbjct: 246 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD---VFWKMKKSDQKPDRVT 302
Query: 659 LKELIEEW 666
L++++
Sbjct: 303 YITLLDKF 310
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ IID G + L + ++ +N L++ + L+ +
Sbjct: 927 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 986
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQK G++ ++ +YN L+ AG A ++Y E L KG K +VFTY+ ++
Sbjct: 987 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE---LLTKG-WKPNVFTYNALI 1042
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + A M+ G PN+ T+ L N
Sbjct: 1043 RGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ L+ SG AL++ ++M DG+ P V Y+ + + +
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ L EM+ + ++PN+ +Y +R + E + LA M G K +
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA---KMENEGCKPDVIT 267
Query: 659 LKELIEEWCE-GVIQD 673
LI+ C+ G I D
Sbjct: 268 HTVLIQVLCDAGRISD 283
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 179/419 (42%), Gaps = 59/419 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVY 312
+Y II+ G G + S + ++ + V+ +I +N+++N A D + L ++
Sbjct: 169 VYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLF 228
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ G+ D+ +YN LL AC G L E + + G++ D+ TYS +V+
Sbjct: 229 AEMRHEGIQPDVITYNTLLGACAHRG---LGDEAEMVFRTMNESGIVP-DINTYSYLVQT 284
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + ++ +M G P+ +++ L+ A A G +++AM +F +M AGC N
Sbjct: 285 FGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ ++LL + ++D LF +S NTD
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEMKVS------------NTD--------------- 377
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHIS 550
P TYNIL++ Y V L ++M + PN +
Sbjct: 378 --------------------PDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQT 417
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI ACG G E A +IL M E G+ P AYT I+ ++ ++A +F M
Sbjct: 418 YEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMN 477
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P + TY +L+ A +R G E + A+ M ++G K + +IE + +G
Sbjct: 478 EVGSNPTVETYNSLIHAFARGGLYKEAE---AILSRMNESGLKRDVHSFNGVIEAFRQG 533
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 198/460 (43%), Gaps = 59/460 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + +G+ ++L + K+ SP++ T+I+ C G D+ ++ ++
Sbjct: 172 YTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM 231
Query: 283 RSQNVTLNIYVFNSLMNVNAH-DLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + + ++ +N+L+ AH L E V++ M + G++ D+ +Y+ L++ G
Sbjct: 232 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTF---GKL 288
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ ++ +E G L D+ +Y+ +++ +A+ + A+ V M +AG N T
Sbjct: 289 NRLEKVSELLREMECGGNLP-DITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAAT 347
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+N G + LF EM + +P++ NIL+Q E F LF
Sbjct: 348 YSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHD-- 405
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ E+ N+E P TY
Sbjct: 406 -------MAEE---------NVE-----------------------------PNMQTYEG 420
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ AC Y K ++ M G+ P+ ++T +I+A G + E AL + M E G
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+P V Y + I R K+A ++ M ++ ++ ++ ++ A + G + +
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGG---QYE 537
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
+ + Y +M KA + N+ L+ ++ +C + D+ + Q
Sbjct: 538 EAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQ 577
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 25/300 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G Y ++ I + + V + + ++ + L +
Sbjct: 413 PNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVM 472
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN L+ A G L +E + + G LK DV +++ +++
Sbjct: 473 FNTMNEVGSNPTVETYNSLIHAFARGG---LYKEAEAILSRMNESG-LKRDVHSFNGVIE 528
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F ++ A+K +M A PN +T ++++ +AGLV++ F+E+ +G P
Sbjct: 529 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILP 588
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ C ++L + + + A+ L + +S +G+ G+ D SN +
Sbjct: 589 SVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQ----- 643
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSP 546
I NS RF YN L++A C R ++NE GL P
Sbjct: 644 -IVEYVFDKLNSEGCGLGMRF--------YNALLEALWCMFQRERAARVLNEASKRGLFP 694
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 48/257 (18%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M S GV +++++INA G ++ L M Q P+ N ++ AC
Sbjct: 155 EVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINAC 214
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
G D++G + M H+ Q
Sbjct: 215 ARG----------------------GLDWEGLLGLFAEMRHEGIQ--------------- 237
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGS 561
P TYN L+ AC +A M M G+ P+ +++ L+ G
Sbjct: 238 ---------PDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKL 288
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E ++L+ M G PD+ +Y ++ +K+A +F +M+ N TY
Sbjct: 289 NRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATY 348
Query: 622 ITLLRARSRYGSLHEVQ 638
LL ++G +V+
Sbjct: 349 SVLLNLYGKHGRYDDVR 365
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 528 DYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D+ R L M R + PN TI+I G G ++ ++ M +G+ V +Y
Sbjct: 113 DWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSY 172
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I R+ + + L MK ++ P+++TY T++ A +R G + + L ++ +
Sbjct: 173 TAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGG--LDWEGLLGLFAE 230
Query: 647 MWKAGYKAN 655
M G + +
Sbjct: 231 MRHEGIQPD 239
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 148/650 (22%), Positives = 260/650 (40%), Gaps = 126/650 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVE---------------SVVVSEGNVSKFASMLSL--EMV 116
Y M L K RL+E I E ++++ G+ KF SL
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365
Query: 117 ASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG---------SGFKLLKNECQRLLD 167
A G + S+ +C++ L K LG A L F+ S + +L + L
Sbjct: 366 ARGCIPSVIA--YNCILTCLGKKGRLGEA-LRTFEEMKKDAAPNLSTYNVLID---MLCK 419
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLC-VNKPDVNLAIRYAC---IVPRADIL 223
+GEVE + + ++E L + I +LC K D +I I ++
Sbjct: 420 AGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVT 479
Query: 224 FCNFVREFGKKRDLVSALRAY----DASK------------------------------- 248
FC+ + GK+ + A R Y D+ K
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
SP++ + +D G+ K RA++E+++S+ ++ ++ L++ V A +
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
T E++ M++ G + D +YN + C +G A ++ E+K KG + V TY
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK---TKG-RQPTVVTY 655
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+++ A A + E+ S G+ N + +SSLI+ G +++A + EE++Q
Sbjct: 656 GSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 715
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN N LL A V+A + + A F+ NM
Sbjct: 716 KGLTPNVYTWNCLLDALVKAEEINEALVCFQ-----------------------NM---- 748
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
+++ TPN + TY+IL+ C + + EM+ GL
Sbjct: 749 -KNLKGTPNHI-------------------TYSILINGLCRVRKFNKAFVFWQEMQKQGL 788
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T +I +GN+ A + + + +G PD +Y I+ S+R +A+
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+FEE + + T I LL A + L + AV +++ K+ + A
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAA 898
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 188/466 (40%), Gaps = 40/466 (8%)
Query: 220 ADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
ADI+ N + FGK + A + + K H P+ ++I V ++ I
Sbjct: 266 ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEI 325
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK---LGVMADMASYNILLKACC 335
+E + Y +N+++ KF E Y +++ G + + +YN +L
Sbjct: 326 FEQMEQNRNVPCAYAYNTMIMGYGSAGKFD-EAYSLLERQKARGCIPSVIAYNCILTCLG 384
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + E+K A ++ TY+ ++ + A + A KV++ M AG+
Sbjct: 385 KKGRLGEALRTFEEMKKDAAP-----NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLF 439
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T + +I+ A +++A +FE M C P+ L+ + + D A+RL
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499
Query: 456 FRSW-------------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ +L K+ G DG+ M H+ N + +
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK-IFKEMIHRGCSPDLRLLNAYMDCVF 558
Query: 503 SSFD-----------KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHI 549
+ + K F P +Y+IL+ + L M+ G +
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ID SG V A Q+L+ M+ G P VV Y + I + RL +A+ LFEE
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
K ++ N+V Y +L+ +G + + + + +++ + G N
Sbjct: 679 KSNGLELNVVIYSSLIDG---FGKVGRIDEAYLIMEELMQKGLTPN 721
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 61/377 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ +L +V D+ TL + MQ+LG + + +++ G A + E+K
Sbjct: 204 LIGALSSVQESDIMLTL--FHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMK- 260
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L D+ Y+ + F A MA K ++ S G+ P+ +T++S+I
Sbjct: 261 ---SNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+++A+ +FE+M Q P + N ++ A +FD A+ L
Sbjct: 318 RLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE--------------- 362
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
K + I P+ YN ++ C R+
Sbjct: 363 ----------RQKARGCI----------------------PSVIAYNCIL-TCLGKKGRL 389
Query: 533 KALM---NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ EM+ +PN ++ +LID +G VE A ++ M+E G+ P+V+
Sbjct: 390 GEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIM 448
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I ++K+L +A S+FE M H P+ VT+ +L+ + G + + + +Y+ M
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR---LYEQMLD 505
Query: 650 AGYKANDTYLKELIEEW 666
+ N LI+ +
Sbjct: 506 SDKIPNAVVYTSLIKSF 522
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 29/427 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ L +AL D K + ++ + ID G G + + ++
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + + S++ V + L +E+++ M++ + +YN ++ AG
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
E Y ++ +A+G + V Y+ I+ AL+ E+M PN T
Sbjct: 355 ---DEAYSLLERQKARGCIP-SVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLST 409
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ LI+ AG VE A + + M +AG PN NI++ +A + D A +F
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469
Query: 461 ---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPT 514
S +V DG R+ + +Q + + +PN+ Y+S K F FK
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK--IPNAVVYTSLIKSF-FK-- 524
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C + EM G SP+ +D +G + + +
Sbjct: 525 -----------CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI 573
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PDV++Y+ I V++ ++ + LF MK + Y T + + G +
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633
Query: 635 HEVQQCL 641
++ Q L
Sbjct: 634 NKAYQLL 640
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P+T T L+ +C + L+ MR P ++T LI A +
Sbjct: 158 GFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIM 217
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + M+E G V +TT I+V R RL A SL +EMK + ++V Y +
Sbjct: 218 LTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDC 277
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+G +V + ++ G +D +I C+G
Sbjct: 278 ---FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKG 316
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY+ + ++ EM G P+ + LI +C S + +++ MR+ P AYT
Sbjct: 145 DYF--EQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYT 202
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
T I + +LF +M+ + ++ + T++R +R G L
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 52/430 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 337 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 396
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 455
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 456 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 515
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 516 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 575
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 576 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ RL A + +M PN+VTY ++ R G E ++ L + M + G
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG---ESEKALKLLSLMEEKGCSP 751
Query: 655 NDTYLKELIE 664
N LI+
Sbjct: 752 NVVTYTALID 761
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 212 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 264
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 265 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 324
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 325 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 384
Query: 469 --------GEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 385 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 444
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 445 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 505 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 564
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 565 YGALVDGLCKAGNI 578
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 156/365 (42%), Gaps = 40/365 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
+CG+ G + K+ + +++ + + ++ ++ H K +++ M+ +GV
Sbjct: 432 LCGV-GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 490
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C AG AQ ++ E++ + V TY+ ++ + AK A
Sbjct: 491 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT----VVTYTALIHAYLKAKQVPQA 546
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+ AG PN +T+ +L++ AG + +A ++ +++ +S
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS--------- 597
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
D F TL+ V G DG + ++H + + ++
Sbjct: 598 -------DFYFPCEDRHTLAPNVVTYGALVDGLC-KAHKVDHAHE---------LLDAML 640
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
SS +P Y+ L+ C + + +M G P+ ++T LID
Sbjct: 641 SS-----GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 695
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A+++L M +D +P+VV YT I R ++A L M+ PN+VT
Sbjct: 696 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 755
Query: 621 YITLL 625
Y L+
Sbjct: 756 YTALI 760
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 142/385 (36%), Gaps = 101/385 (26%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G A E G +K + TY+ +V+V + A + +V++
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFG----YRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M +G + T +A G A+ + E + + ++ C ++ +EA
Sbjct: 234 EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEAS 290
Query: 448 QFDRA------------------FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
FD A +R S L K Q+ G RI NM
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL-------GWCKRIINM------M 337
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+T N P + +N L+ + C DY L+N M T G P
Sbjct: 338 MTEGCN-----------------PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380
Query: 548 HISWTILIDA-CG----------------------------------------GSGNVEG 566
++ + I I + CG G G +
Sbjct: 381 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 440
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q++K M G PD Y+ I + ++++AF LF+EMK + P++ TY L+
Sbjct: 441 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 500
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G + + Q ++++M G
Sbjct: 501 SFCKAGLIEQAQW---LFEEMRSVG 522
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 69/328 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 489 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 548
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 549 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 701
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 702 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 738
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGS 561
L++ M G SPN +++T LID G S
Sbjct: 739 KLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 507 KRFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F ++P+ TYN L++ + +RV+ EM G + + A
Sbjct: 201 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ---KEMSESGFCMDRFTVGCFAHALCKE 257
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G AL +++ RED D V T I + + +A S M+ PN+VTY
Sbjct: 258 GRWADALDMIE--RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 314
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TLL S + ++ C + M G N + L+ +C
Sbjct: 315 RTLL---SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 357
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 601 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 714
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+V TY+ ++ + ALK+ M G +PN +T+++LI+
Sbjct: 715 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 171/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 384 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + Q + KP TYN
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQR--------------------NLKPDVVTYNT 539
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 694
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 194/452 (42%), Gaps = 27/452 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 303
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 304 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT--TTT 517
L D T I N V + D+ T
Sbjct: 421 K----NAGLAPDNVIYTILIGGF----------CRNGVMSEALKVRDEMLEQGCVLDVVT 466
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C + +A L EM G+ P+ ++T LI+ GN+ A+ + ++M
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PDVV Y T I + +++ L+ +M +I PN ++Y L+ Y ++
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING---YCNMG 583
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V + ++ +M + G++A +++ +C
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 615
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 185/415 (44%), Gaps = 68/415 (16%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 194 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 253
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 254 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 309
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 366
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 367 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 395
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 396 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 440
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+ TL+ S+ G+++ + + +++ M + K + LI+ +C+G +K
Sbjct: 501 TFTTLINGYSKDGNMN---KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + F + K L AL+ + K +P+ I +I G C + + S
Sbjct: 390 VVPDL-VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMS 446
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
A + +++ Q L++ +N+++N + L E++ M + GV D ++ L+
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN A ++ + + LK DV TY+T++ F + ++ DM+S
Sbjct: 507 NGYSKDGNMNKAVTLF----EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 562
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ PN I++ LIN N G V +A L++EM++ G E CN +++ A +
Sbjct: 563 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 622
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A + +SNM K
Sbjct: 623 A-----------------------DEFLSNMLLK------------------------GI 635
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + R AL+N+M GL P+ I++ ++++ G ++ A
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 695
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
I+ M E G++PD YT+ I V LK+AF + +EM P+
Sbjct: 696 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 502 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 559
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 678
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 679 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 739 GFVPDDK 745
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V A L+ + + M++ G D+ + +L++ C AG
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ + ++ + + G N
Sbjct: 291 RLADAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++ ++A G V++A+ +F+EM Q G P N L+ ++A +F+RA LF
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ G +G T + N K +S+ + K P
Sbjct: 407 MNIH------GPTPNGYTHVLFINYHGKSGESLKALKRY-------ELMKSKGIVPDVVA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + +E++ +G+SP++I++T++I C + N + A++I M
Sbjct: 454 GNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E+ +PDV+A + I + ++ R +A+ +F E+K ++P TY TLL R G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 636 EVQQCL 641
EV Q L
Sbjct: 574 EVMQLL 579
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 163/380 (42%), Gaps = 59/380 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
V+L +N+L+ V+ + E++ M++LG D +Y+++L A G ++
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA---MGKSMRI 817
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ + + KG K TY+TI+ +K A+ + ++S G +P T+
Sbjct: 818 EDMLKIQEEMHNKGY-KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGP 876
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G +E A LF+EML+ GCEPN NILL A ++ LF S
Sbjct: 877 LLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV--- 933
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+Q + P +Y +++
Sbjct: 934 -----------------------EQGMN---------------------PDIKSYTVVID 949
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D L ++ +GL P+ I++ +LI G SG +E AL + M + G++P
Sbjct: 950 TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS +
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS---PENAF 1066
Query: 642 AVYQDMWKAGYKAN-DTYLK 660
A Y M G + N TY++
Sbjct: 1067 AAYGRMIVGGCRPNSSTYMQ 1086
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 186/433 (42%), Gaps = 41/433 (9%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + + +D ++ + N+ T+ G+ G + ++
Sbjct: 104 CNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMK 163
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + ++VYK M GV+ + +Y++L+ A G
Sbjct: 164 EAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA---FGKRR 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + G + +EA+GV + +V++Y+ ++V A + A ++ M G P+ +T
Sbjct: 221 DAETVVGLLGEMEARGV-RPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M + +P+ LL C ++ S ++
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD---------SRSV 330
Query: 462 SKTQVALGED--------YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
S+ AL D Y D + + D+ FD K+
Sbjct: 331 SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEA-------------LDVFDEMKQKGI 377
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ + R L N M G +PN + + I+ G SG AL+
Sbjct: 378 IPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALK 437
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++M+ G+ PDVVA + ++ RL A +F E+K I P+ +TY +++ S
Sbjct: 438 RYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCS 497
Query: 630 RYGSLHEVQQCLA 642
+ + E + A
Sbjct: 498 KASNADEAMKIFA 510
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 64/352 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 752 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 805
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 866 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 890
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 891 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G+K N
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKGWKPN 1045
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 184/426 (43%), Gaps = 60/426 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S ++A K + N+ +D G ++ ++++
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A MA +V ++ + G++P+ I
Sbjct: 432 SLKALKRY---ELMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + +PT TYN
Sbjct: 548 -----------------------------------------------KEMNLEPTDCTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ M + PN I++ ++D +G V AL +L M +
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG----S 633
G PD+ +Y T + V+ RL +AF +F +MK + P+ T T+L + R G +
Sbjct: 621 GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEA 679
Query: 634 LHEVQQ 639
LH V++
Sbjct: 680 LHTVRE 685
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY++LM A D V L+ EM G+ PN S+TI I G +G +E A +I
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M E+G PDVV T I++ + RL A +F +MK +P+ VTYITLL
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G V + ++ + GY N ++ C+
Sbjct: 324 SGDSRSVSE---IWNALKADGYNDNVVSYTAAVDALCQ 358
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN I +++ I GD K ++E + Q + +I + +++ D L L
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 1019
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 432 NS 433
NS
Sbjct: 1080 NS 1081
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++ C G + K L G L+ D+ TY+ ++ + + AL +
Sbjct: 945 TVVIDTLCADGRL---NDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++ +
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060
Query: 448 QFDRAFRLF 456
+ AF +
Sbjct: 1061 SPENAFAAY 1069
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 997
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 998 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 1053
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ LI SG A+ + K M DG+ P V Y+ + + +
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ L EM+ ++PN+ +Y +R + G L E + L + M + G K +
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRIL---RKMEEEGCKPDVVT 278
Query: 659 LKELIEEWCE 668
LI+ C+
Sbjct: 279 NTVLIQILCD 288
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V A L+ + + M++ G D+ + +L++ C AG
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ + ++ + + G N
Sbjct: 291 RLADAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++ ++A G V++A+ +F+EM Q G P N L+ ++A +F+RA LF
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ G +G T + N K +S+ + K P
Sbjct: 407 MNIH------GPTPNGYTHVLFINYHGKSGESLKALKRY-------ELMKSKGIVPDVVA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + +E++ +G+SP++I++T++I C + N + A++I M
Sbjct: 454 GNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E+ +PDV+A + I + ++ R +A+ +F E+K ++P TY TLL R G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 636 EVQQCL 641
EV Q L
Sbjct: 574 EVMQLL 579
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 163/380 (42%), Gaps = 59/380 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
V+L +N+L+ V+ + E++ M++LG D +Y+++L A G ++
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA---MGKSMRI 817
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ + + KG K TY+TI+ +K A+ + ++S G +P T+
Sbjct: 818 EDMLKIQEEMHNKGY-KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGP 876
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G +E A LF+EML+ GCEPN NILL A ++ LF S
Sbjct: 877 LLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV--- 933
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+Q + P +Y +++
Sbjct: 934 -----------------------EQGMN---------------------PDIKSYTVVID 949
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D L ++ +GL P+ I++ +LI G SG +E AL + M + G++P
Sbjct: 950 TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS +
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS---PENAF 1066
Query: 642 AVYQDMWKAGYKAN-DTYLK 660
A Y M G + N TY++
Sbjct: 1067 AAYGRMIVGGCRPNSSTYMQ 1086
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 186/433 (42%), Gaps = 41/433 (9%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + + +D ++ + N+ T+ G+ G + ++
Sbjct: 104 CNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMK 163
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + ++VYK M GV+ + +Y++L+ A G
Sbjct: 164 EAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA---FGKRR 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + G + +EA+GV + +V++Y+ ++V A + A ++ M G P+ +T
Sbjct: 221 DAETVVGLLGEMEARGV-RPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M + +P+ LL C ++ S ++
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD---------SRSV 330
Query: 462 SKTQVALGED--------YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
S+ AL D Y D + + D+ FD K+
Sbjct: 331 SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEA-------------LDVFDEMKQKGI 377
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ + R L N M G +PN + + I+ G SG AL+
Sbjct: 378 IPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALK 437
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++M+ G+ PDVVA + ++ RL A +F E+K I P+ +TY +++ S
Sbjct: 438 RYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCS 497
Query: 630 RYGSLHEVQQCLA 642
+ + E + A
Sbjct: 498 KASNADEAMKIFA 510
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 64/352 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 752 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 805
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 866 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 890
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 891 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G+K N
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKGWKPN 1045
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 184/426 (43%), Gaps = 60/426 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S ++A K + N+ +D G ++ ++++
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A MA +V ++ + G++P+ I
Sbjct: 432 SLKALKRY---ELMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + +PT TYN
Sbjct: 548 -----------------------------------------------KEMNLEPTDCTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ M + PN I++ ++D +G V AL +L M +
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG----S 633
G PD+ +Y T + V+ RL +AF +F +MK + P+ T T+L + R G +
Sbjct: 621 GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEA 679
Query: 634 LHEVQQ 639
LH V++
Sbjct: 680 LHTVRE 685
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY++LM A D V L+ EM G+ PN S+TI I G +G +E A +I
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M E+G PDVV T I++ + RL A +F +MK +P+ VTYITLL
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G V + ++ + GY N ++ C+
Sbjct: 324 SGDSRSVSE---IWNALKADGYNDNVVSYTAAVDALCQ 358
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN I +++ I GD K ++E + Q + +I + +++ D + L
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 1019
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 432 NS 433
NS
Sbjct: 1080 NS 1081
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++ C G + K L G L+ D+ TY+ ++ + + AL +
Sbjct: 945 TVVIDTLCADGRL---NDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++ +
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060
Query: 448 QFDRAFRLF 456
+ AF +
Sbjct: 1061 SPENAFAAY 1069
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 997
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 998 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 1053
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ LI SG A+ + K M DG+ P V Y+ + + +
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ L EM+ ++PN+ +Y +R + G L E + L + M + G K +
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRIL---RKMEEEGCKPDVVT 278
Query: 659 LKELIEEWCE 668
LI+ C+
Sbjct: 279 NTVLIQILCD 288
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 229/549 (41%), Gaps = 64/549 (11%)
Query: 114 EMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC---QRLLDS-G 169
+MV +G+ S+ + V+G L + +L A LF+ K L+ + L+D G
Sbjct: 241 DMVVAGLSPSVFT--YNMVIGCLAREGDLEAAR-SLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
+V M G + V EE + E PDV I Y ++ FC F R
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCE--------------PDV---ITYNSLIN----CFCKFER 336
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ A K+ PN+ T+ID G +++ + D+ +
Sbjct: 337 -------IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQP 389
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N + + SL++ N DL ++ MQ+ GV ++ +Y LL C G A+E++
Sbjct: 390 NEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G + L+A L + Y+++ + AK + A+ + E+M + P+ + + + I
Sbjct: 450 GAL--LKAGWTLNQQI--YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKT 464
+E +M + EM+ G NS L+ A + + A L + + T
Sbjct: 506 LCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G DG +I ++ + Y R +P Y L+
Sbjct: 566 VVTYGVLIDGLC-KIGLVQQAVR--------------YFDHMTRNGLQPNIMIYTALIDG 610
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + K L NEM G+SP+ + +T LID GN AL + M E GM D
Sbjct: 611 LCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELD 670
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AYT+ I R +++ A SL +EM I P+ V I LLR +Y L ++ + LA
Sbjct: 671 LCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR---KYYELGDINEALA 727
Query: 643 VYQDMWKAG 651
++ DM + G
Sbjct: 728 LHDDMARRG 736
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 177/424 (41%), Gaps = 58/424 (13%)
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK 306
S +++ P + T+ +V G ++R + + V + N L++ + K
Sbjct: 172 STRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSK 231
Query: 307 --FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L +K+M G+ + +YN+++ G+ A+ ++ E+K AKG L+ D+
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK---AKG-LRPDIV 287
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY++++ + A+ V E+M AG P+ IT++SLIN + QA M
Sbjct: 288 TYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G +PN + L+ A +A A + F D I
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF-------------------VDMI----- 383
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
R +P TY L+ A C D L +EM+
Sbjct: 384 -----------------------RVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G++ N +++T L+D G + A ++ + + G + + YT+ +++K +++A
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ EEM ++P+L+ Y T + R +E++ +AV ++M G AN L
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQ---NEIEDSMAVIREMMDCGLTANSYIYTTL 537
Query: 663 IEEW 666
I+ +
Sbjct: 538 IDAY 541
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 63/338 (18%)
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
VLA ++ + +L+A+ V+K + + + F ++ M + P
Sbjct: 133 VLAHILFCGMFYLDARSVIK----EWILLGREFPGCDFFDMLWSTRNV-----CRPGFGV 183
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +L N + G++E+A F +M + P + CN LL ++ + A F+
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
++ P+ TYN+
Sbjct: 244 VA-----------------------------------------------GLSPSVFTYNM 256
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ D ++L EM+ GL P+ +++ LID G G + GA+ + + M++ G
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV+ Y + I + +R+ QAF MK +QPN+VTY TL+ A + G L E
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ + DM + G + N+ LI+ C+ I D N+
Sbjct: 377 K---FFVDMIRVGLQPNEFTYTSLIDANCK--IGDLNE 409
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 177/439 (40%), Gaps = 78/439 (17%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y ++ + V LN +S +A + V + M G + D ++Y+ +L C
Sbjct: 436 YSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCN 495
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A LA ++ E+K +G L DV+TY+ +V F A + A K +M G TP
Sbjct: 496 ASKMELAFLLFEEMK----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++LI+A A V A LFE ML GC PN + L+ +A Q ++A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIF 611
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + P+ + ++ +D S +P
Sbjct: 612 ERMCGSK----------------------------DVPDV--DMYFKQYDDDNSERPNVV 641
Query: 517 TYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C +RV + L++ M G PN I + LID G ++ A ++
Sbjct: 642 IYGALLDGFCK-LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAE 700
Query: 574 MREDGM-----------------------------------SPDVVAYTTAIKVCVRSKR 598
M E G +P+VV YT I + +
Sbjct: 701 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 760
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A+ L + M+ QPN+VTY ++ +G + +++ CL + + M G N
Sbjct: 761 TDEAYKLMQMMEEKGCQPNVVTYTAMIDG---FGRIGKIETCLELLERMGSKGVAPNYVT 817
Query: 659 LKELIEEWCEGVIQDKNQN 677
+ LI+ C+ D N
Sbjct: 818 YRVLIDHCCKNGALDVAHN 836
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 171/389 (43%), Gaps = 54/389 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++ NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP------------NSQC 435
MLS G PN +T+S+LI+ AG +E+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637
Query: 436 CNI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDK 487
N+ LL + + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQE 696
Query: 488 QSITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 527 ----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 757 KVGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPN 814
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
V Y I C ++ L A +L EEMK
Sbjct: 815 YVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 156/406 (38%), Gaps = 72/406 (17%)
Query: 293 VFNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNIL----LKACCLAGNTVL 342
VF +NV + LE ++ ++YN L LKA CL +++
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLV 257
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+E+ + L++D FT W+ AL + E + P+T+ ++
Sbjct: 258 HREM--------SLANLRMDGFTLRCYAYSLCKVGKWREALTLME---TENFVPDTVFYT 306
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LI+ A L E+AM M C PN + LL C L+
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-----------------LN 349
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTP---NFVPNSHYSSFDKRFSFK------- 512
K Q+ G R+ NM + +P N + +++ +S D +++K
Sbjct: 350 KKQL-------GRCKRVLNMMMM--EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 513 ----PTTTTYNILMKACCTDYYRVKALM--------NEMRTVGLSPNHISWTILIDACGG 560
P YNIL+ + C D + + +EM G+ N I+ +
Sbjct: 401 CGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCS 460
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G E A +++ M G PD Y+ + + +++ AF LFEEMK + ++ T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
Y ++ + + G ++Q + +M + G N LI +
Sbjct: 521 YTIMVDSFCKAGL---IEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 181/483 (37%), Gaps = 121/483 (25%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G YNIL+ + C +++
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC------- 426
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
HL ++A K +ML+ GV N I SS +
Sbjct: 427 -HL-------------------------LELAEKAYSEMLATGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI----QPNLVTYITLLRARSRY 631
I ++ ++++A +FE M K Y +PN+V Y LL +
Sbjct: 594 LIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG---F 650
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEV--------- 681
LH V++ + M G + N LI+ C+ G + + + + E+
Sbjct: 651 CKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATL 710
Query: 682 ----TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRM 734
+L R + Q L + ++ L+ S A N+ I + GL KV +++M
Sbjct: 711 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 770
Query: 735 MKE 737
M+E
Sbjct: 771 MEE 773
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + F K + A + DA PN + +ID G+C G +++ +
Sbjct: 641 VIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALID--GLCKVGKLDEAQEVK 698
Query: 280 EDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +Y ++SL++ V DL +V M + ++ Y ++ C
Sbjct: 699 AEMSEHGFPATLYTYSSLIDRYFKVKRQDL--ASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G T E Y ++ +E KG + +V TY+ ++ F + L++ E M S GV
Sbjct: 757 KVGKT---DEAYKLMQMMEEKGC-QPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVA 812
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 813 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 724 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 779
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 780 VVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 839
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 840 EMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRL 899
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A V++A LF EM + G P Q
Sbjct: 900 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 213/504 (42%), Gaps = 82/504 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 279 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 338
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 339 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 398
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 399 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 458
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 459 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 571
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 572 --------------------------------------------KEMNLEPTDGTYNTLL 587
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 588 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 647
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 648 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 706
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+ Y + G K + + L+E
Sbjct: 707 IKDY--FLQPGSKTDRSSCHSLME 728
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 57/447 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 240 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 276
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 277 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 327 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 382
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 383 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 436
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 437 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 489
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L ++M
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL---EEM 606
Query: 648 WKAGYKANDTYLKELIEEWCE-GVIQD 673
+ + Y N +++ C+ G + D
Sbjct: 607 YHSNYPPNLITYNTILDCLCKNGAVND 633
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 186/460 (40%), Gaps = 65/460 (14%)
Query: 236 DLVSALRAYD-----------ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
D++ ALR+ D A++K + C ++++ G +++ ++
Sbjct: 94 DVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQR 153
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q V N+ F ++ + L+ M++ G++ + +YN L+ +G
Sbjct: 154 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 213
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+Y + + GV+ V TYS ++ F + + L + +M + GV PN +++
Sbjct: 214 ALEVY---RVMMVDGVVP-SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 269
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
I A ++A + +M GC+P+ +L+Q +A + A +F W +
Sbjct: 270 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF--WKMK 327
Query: 463 KTQVALGEDYDGNTDRISNM-------EHKDKQSITNTPNFVPNSHYSS----------- 504
K+ D DR++ + ++ D QS+ N + Y+
Sbjct: 328 KS--------DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 379
Query: 505 -------------FD--KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
FD K+ P +YN L+ + L M G PN
Sbjct: 380 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + I+ G SG A+Q ++M+ G+ PDVVA + +S RL A +F
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
E+K + P+ +TY +++ S+ E + ++ DM
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEA---VKIFYDM 536
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ TY++LM A D V L+ EM G+ PN S+TI I G + + A +I
Sbjct: 228 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 287
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M +G PDV+ +T I+V + R+ A +F +MK +P+ VTYITLL +
Sbjct: 288 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---DK 344
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+G + Q + ++ M GY N +I+ C+
Sbjct: 345 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 382
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 177/409 (43%), Gaps = 25/409 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++ID G ++ I+ L+ N+ +N+L+ + +K + +
Sbjct: 543 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 602
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++ +YN +L C G A ++ + + KG + D+ +Y+T++
Sbjct: 603 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM---LYSMTTKGCIP-DLSSYNTVIY 658
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE-MLQAGCE 430
+ + A + M + P+ T +++ + GL+++A+H+ ++ LQ G +
Sbjct: 659 GLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSK 717
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ C+ L++ ++ +++ + ++ + + L + + ++H KQ
Sbjct: 718 TDRSSCHSLMEGILKKAGIEKSIEF--AEIIASSGITLDDFF-----LCPLIKHLCKQKK 770
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
+ + K F T YN L+ + + L EM+ +G P+
Sbjct: 771 ALEAHELVKKF-----KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 825
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +L+DA G S +E L++ + M G V Y T I V+S+RL+QA L+
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ P TY LL + G + + + ++ +M + G KAN T
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN---LFNEMLEYGCKANCT 931
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 755 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 813
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 814 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 869
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 870 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 929
Query: 433 SQCCNILLQACVEACQFDRAFRLFR 457
NILL A ++ LF+
Sbjct: 930 CTIYNILLNGHRIAGNTEKVCHLFQ 954
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ ++++L+ A G +VE L +L+ M G+ P+V +YT I+V ++KR
Sbjct: 221 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 280
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A+ + +M++ +P+++T+ L++ G + + + V+ M K+ K +
Sbjct: 281 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD---VFWKMKKSDQKPDRVT 337
Query: 659 LKELIEEW 666
L++++
Sbjct: 338 YITLLDKF 345
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C + A E+ VK ++ GV L Y++++ D +A + +M
Sbjct: 761 LIKHLCKQKKALEAHEL---VKKFKSFGV-SLKTGLYNSLICGLVDENLIDIAEGLFAEM 816
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G P+ T++ L++A + +E+ + + EEM + G E N ++ V++ +
Sbjct: 817 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 876
Query: 450 DRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
++A L+ S S T G DG RI + E+ + +
Sbjct: 877 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-------------- 922
Query: 505 FDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ K T YNIL+ + +V L +M G++P+ S+TI+ID
Sbjct: 923 ---EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ L+ SG AL++ ++M DG+ P V Y+ + + +
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ L EM+ + ++PN+ +Y +R + E + LA M G K +
Sbjct: 246 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA---KMENEGCKPDVIT 302
Query: 659 LKELIEEWCE-GVIQD 673
LI+ C+ G I D
Sbjct: 303 HTVLIQVLCDAGRISD 318
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 193/445 (43%), Gaps = 74/445 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+ID+ G +++ + E + + L+I +++L+ H + ++ +MQKLG
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEV----------------------------- 350
D +Y L+K C GN A +++ E+
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 351 ---------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
K ++A+G++ DV +Y+T++ F + W+ A + +ML G+ P+ T
Sbjct: 317 REDEARELFKEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-- 459
S LI+ G V +A L E ++Q GC P+ C L++ + +A +LF
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Query: 460 ------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSF------ 505
++ + G GN +I+ HK+ S T+ N PN+ S
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNI-KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 506 ------DKRFSFK--------PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+ R FK P +Y L+ C + K L NEM +G+ P+
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++++LID G V A ++L++M + G P+ V YTT +K + R+ +A LF +M
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL 634
+ P++VTY TL++ + G++
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNI 639
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 185/433 (42%), Gaps = 76/433 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--N 290
KK ++ A + + + P++ C T++ G+C + S+A L+ Q + N
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK--GLCMKHRISKATQLFLKMQKLGCMPN 441
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNM------QKLGVMADMASYNILLKACCLAGNTVL 342
+ +LM + ++K LE++KNM + + SY+I++ C G
Sbjct: 442 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 501
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+E++ E+K L GV+ DV +Y++++ F + W+ A + +M+ GV P+ T+S
Sbjct: 502 ARELFKEMKAL---GVIP-DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LI+ G V +A L E M+Q GC PN+ L++ + A +LF
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM--- 614
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ P TY LM
Sbjct: 615 --------------------------------------------QKLGCLPDVVTYGTLM 630
Query: 523 KACC------TDYYRVKALMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQILKIM 574
K C T K ++++ G P+ IS++I+ID G + A ++ K M
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ P+V++YT+ I RS +L+ A LF EM +Q N VTY ++ + G +
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750
Query: 635 HEVQQCLAVYQDM 647
+ A++Q M
Sbjct: 751 DK-----ALFQKM 758
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 186/463 (40%), Gaps = 94/463 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + ++
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ +M+KLG D +Y L+K C G +A ++ E+
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 351 -----------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
K ++A+G++ DV +Y++++ F + W+ A + +ML G
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ + T S LI+ G V +A L E M+Q GC + + L++ + A
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246
Query: 454 RLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
RLF S +A G G T I+ ++ + +T +
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRY-----------G 295
Query: 509 FSFKPTTTTYNILMKACCTD-------------------------------------YYR 531
KPT +Y+I++ C D + +
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K L NEM VG+ P+ + ++LID G V A ++L+++ + G PDVV TT +K
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R+ +A LF +M+ PN+VT TL++ + G++
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 458
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 62/336 (18%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
ML G+ P+ T LI+ G V +A L E M+Q GC + + L++ +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 449 FDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A +LF S +A G G T +I+ H ++ + +T S Y
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT------SQYG 114
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----------------------------------- 528
KPT +Y+I++ C D
Sbjct: 115 -----IKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRS 169
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + K L NEM VG+ + + ++LID G V A ++L++M + G D+V Y
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+T IK R+ +A LF M+ +P+ + Y TL++ + G+++ Q ++Q+
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQ---LHQE 286
Query: 647 MW----KAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
M + G K T + I +G+ +D+ +++
Sbjct: 287 MLNDTGRYGIKCKPTLISYSI--IIDGLCKDRREDE 320
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 181/403 (44%), Gaps = 60/403 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + ++ +++ + +++N D+ L + K M+K + A++ YN ++
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C + A +++ + +E KG+ K DVFTY++++ + W A ++ DM+ +
Sbjct: 267 CKYKHMDDAFDLFNK---METKGI-KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++SLI+A A G + +A LF+EM+Q +PN N L+ C DR
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDE 379
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +TL ++ L P
Sbjct: 380 AQQIFTLMVSKDCL--------------------------------------------PD 395
Query: 515 TTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+K C RV+ L EM GL N +++ LI +G+ + A +I
Sbjct: 396 VVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M DG+ PD++ Y+ + + +L++A +FE ++ +++PN+ TY ++ +
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
G +V+ ++ + G K N +I +C ++++
Sbjct: 515 G---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 179/408 (43%), Gaps = 39/408 (9%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+ILL C LA + G++ L + D+ T S+++ + K
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEP----DIVTLSSLLNGYCHGKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++LI+ +A+ L + M+ GC+P+ ++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + +H D
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANV-VIYNTIIDGLCKYKHMDDA------------- 275
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID 556
+ F+K + KP TYN L+ +C +Y R L+++M ++PN +++ LID
Sbjct: 276 FDLFNKMETKGIKPDVFTYNSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A G + A ++ M + + P++V Y + I RL +A +F M P
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++VTY TL++ + V++ + ++++M + G N LI+
Sbjct: 395 DVVTYNTLIKG---FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 152/381 (39%), Gaps = 86/381 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+++ ++I G + + + D+ + + N+ FNSL++ A + K ++
Sbjct: 289 PDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + ++ +YN L+ C+ AQ+I+ + +K L DV TY+T++K
Sbjct: 349 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF---TLMVSKDCLP-DVVTYNTLIK 404
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G P
Sbjct: 405 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 464
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ +ILL + + ++A +F SK +
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKME-------------------------- 498
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
P TYNI+++ C
Sbjct: 499 ---------------------PNIYTYNIMIEGMCK------------------------ 513
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+G VE + + G+ P+V+ YTT I R ++A +LF EMK
Sbjct: 514 ---------AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564
Query: 612 YQIQPNLVTYITLLRARSRYG 632
P+ Y TL+RAR R G
Sbjct: 565 DGTLPDSGCYNTLIRARLRDG 585
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 150/355 (42%), Gaps = 56/355 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+K C A E++ E+ G + TY+T++
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYNTLI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN NI+++ +A + + + LF S +L
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP Y ++ C + AL EM+ G P+
Sbjct: 531 -------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 625
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 120/308 (38%), Gaps = 52/308 (16%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S ++ A + + + + E M + G+ N T+S L+N + A+ +
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLG 140
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EP+ + LL + R+ + L V +G
Sbjct: 141 KMMKLGYEPDIVTLSSLLNG------YCHGKRISEAVALVDQMVEMG------------- 181
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+KP T T+N L+ AL++ M
Sbjct: 182 ----------------------------YKPDTVTFNTLIHGLFLHNKASEAVALIDRMV 213
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P+ ++ +++ G+++ AL +LK M + + +VV Y T I + K +
Sbjct: 214 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMD 273
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
AF LF +M+ I+P++ TY +L+ YG + + L+ DM + N
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS---DMIERKINPNVVTFN 330
Query: 661 ELIEEWCE 668
LI+ + +
Sbjct: 331 SLIDAFAK 338
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMS-------------------PDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
G+ PDV+ YTT +K +R ++ + ++EEM
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEM 589
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 168/397 (42%), Gaps = 47/397 (11%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DLR + + +F+ L++ A LE+ + Q +G+ + L+ A AG
Sbjct: 218 DLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ E G +K Y+ ++K + + A +V ++M GV P+
Sbjct: 278 RVAEAEALFLE---FFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDE 334
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S L++A AG E A L +EM G +P+S + +L + + +AF + R
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK--RFSFKPTT 515
S + DR H I + H +F+K +P
Sbjct: 395 MQASGVR----------PDR-----HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDV 439
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ A C + R L EMR P ++ I+I+ G + EG +L
Sbjct: 440 VTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-------------------HYQI 614
M+E G+ P+++ YTT + V RS R K+A E MK +
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+P+++TY TL++A R + + + +Y++M +G
Sbjct: 560 RPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 593
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 54/239 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ Y+ I+ GD+ K+ A+ ++++ V + + +N +++ + L ++
Sbjct: 367 PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDA 426
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------------GE 349
+ M++ G+ D+ ++N L+ A C G A E++ GE
Sbjct: 427 FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE 486
Query: 350 VKHLEA----------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+H E +G++ ++ TY+T+V V+ + ++ A+ E M + G+ P+
Sbjct: 487 QEHWEGVEAMLSEMKEQGLVP-NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 400 TWSSLINACANAGL----------------VEQ---AMHLFEEMLQAGCEPNSQCCNIL 439
+ +L+NA A GL VEQ ++EEM+ +GC P+ + +L
Sbjct: 546 MYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 604
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 171/373 (45%), Gaps = 31/373 (8%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ FN+L++ K ++++ M K+G D+ +Y+ ++ C GNT +A ++
Sbjct: 10 LVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL-- 67
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +E KG K +V Y+TI+ + A+ +M+ G+ P+ T+SS+++
Sbjct: 68 -LKKMEEKGC-KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK----- 463
N G V +A LF++M++ PN IL+ + A+ +F + T
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 464 -TQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK------- 507
T AL + Y D + M+ K + N + N H S D+
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 508 --RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S P TY+ LM+ C + L+ EM + GL PN I+++I++D G+
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A ++LK M+E + P++ YT I+ +L+ A LF + IQP +VTY
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Query: 624 LLRARSRYGSLHE 636
++ + G +E
Sbjct: 366 MISGLLKGGLSNE 378
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 29/315 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+ + T++T++ A+K+ ++M+ G P+ IT+S++IN G A+
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
L ++M + GC+PN N ++ + + A F + G
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSF------DKRF--------------SFKP 513
N R++ KQ + N +PN + KR +P
Sbjct: 126 CNLGRVNEATSLFKQMVER--NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + L N M G +PN S+ ILI+ SG ++ A +L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++PD+ Y+T ++ + R ++A L +EM Y + PNL+TY +L ++
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 632 GSLHEVQQCLAVYQD 646
G L E + L Q+
Sbjct: 304 GHLDEAFELLKAMQE 318
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +PT T+N L+ C+ + A L +EM +G P+ I+++ +I+ GN
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
ALQ+LK M E G P+VVAY T I + + + +A F EM I P++ TY ++L
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +L V + ++++ M + N LI+ C+
Sbjct: 123 HG---FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK 162
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 119/251 (47%), Gaps = 13/251 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ + +PN+ +I+ G +++ + ++ +++T +I+ +++LM
Sbjct: 204 AQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMR 263
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E+ K M G++ ++ +Y+I+L C G+ A E+ ++ E+K
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ--ESK- 320
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ ++F Y+ +++ + A ++ ++ G+ P +T++ +I+ GL +A
Sbjct: 321 -IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
LF EM GC PNS N+++Q + A RL V G D +T
Sbjct: 380 CELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM------VGKGFSADSSTF 433
Query: 478 R-ISNMEHKDK 487
R +S++E D+
Sbjct: 434 RMLSDLESSDE 444
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M +GL P +++ L+ + A+++ M + G PDV+ Y+T I +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
A L ++M+ +PN+V Y T++ + + V + + + +M K G +
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKD---RLVTEAMDFFSEMVKEGIPPDVFT 117
Query: 659 LKELIEEWC 667
++ +C
Sbjct: 118 YSSILHGFC 126
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 166/381 (43%), Gaps = 34/381 (8%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN++L+ +A ++ + + ++G+ V+T+ ++K F A +
Sbjct: 167 SYNVVLEILVAGNCPKVAPNVFYD---MLSRGI-SPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G PN+I + LI+A + V +AM L EEM GCEP+ Q N ++ +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 446 ACQFDRAFRLFRSWTLSK-TQVALGEDY-------DGNTDRISNMEHKDKQSITNTPNFV 497
A + A +L L T AL + Y G D M K T N +
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTL 342
Query: 498 PNSHYSSFDKRF--------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
N + S RF F+P T+NI++ C Y V AL ++EM
Sbjct: 343 INGYVVS--GRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++TILID G+ E A +++ M G+S + V Y I + +++
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A ++ EM +P++ T+ +L+ + + E L +Y+DM G AN
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA---LGLYRDMLLEGVIANTVTYNT 517
Query: 662 LIEEWCE-GVIQDKNQNQGEV 681
LI + +IQ ++ GE+
Sbjct: 518 LIHAFLRLELIQQADKLVGEM 538
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 173/388 (44%), Gaps = 39/388 (10%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVM 321
G+C G ++RA+ + + N L +N+L+N +F +YKNM G
Sbjct: 314 GLCRMGKVDEARAMLSKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D ++NI++ C G V A E E+ K + +V TY+ ++ F ++
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEM----VKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M + G++ NT+ ++ LI A G ++ A+ ++ EM GC+P+ N L+
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + + A L+R L E NT + + H F+
Sbjct: 486 GLCKNDKMEEALGLYRDMLL--------EGVIANTVTYNTLIHA----------FLRLEL 527
Query: 502 YSSFDK-----RFSFKP-TTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTI 553
DK RF P TYN L+KA C K L+ +M + P+ S I
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI++ +G V ALQ L+ M + G++PD+V Y + I + R ++A +LF ++
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I P+ VTY TL+ G ++ Q L
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLL 675
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 26/331 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK LVSAL D K PN+ +ID G C G + ++ + + ++ ++LN
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILID--GFCKQGHFEEASKVVNSMSAKGLSLN 441
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N L+ D K L++Y M G D+ ++N L+ C +E G
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM---EEALG 498
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +GV+ + TY+T++ F + Q A K+ +M G + IT++ LI A
Sbjct: 499 LYRDMLLEGVIA-NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G E+ + L E+M P+ CNIL+ + + + A + R Q L
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM----IQRGL 613
Query: 469 GEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D I+ + + Q N N + + P TYN L+ C
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGL---------QAKGIHPDAVTYNTLISRYCY 664
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILID 556
+ + L+ + + G PN I+W+ILI+
Sbjct: 665 EGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 488 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + + +R + KP TYN
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTL-------------------FEMMIQR-NLKPDVVTYNT 643
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 798
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 194/452 (42%), Gaps = 27/452 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 407
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 408 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTT 517
L D T I N V + D+ T
Sbjct: 525 K----NAGLAPDNVIYTILIGGF----------CRNGVMSEALKVRDEMLEQGCXLDVVT 570
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C + +A L EM G+ P+ ++T LI+ GN+ A+ + ++M
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PDVV Y T I + +++ L+ +M +I PN ++Y L+ Y ++
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING---YCNMG 687
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V + ++ +M + G++A +++ +C
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 719
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 184/415 (44%), Gaps = 68/415 (16%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 298 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 357
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 358 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 413
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 470
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 471 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 499
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 500 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 544
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+ TL+ + G+++ + + +++ M + K + LI+ +C+G +K
Sbjct: 605 TFTTLINGYXKDGNMN---KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 656
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + F + K L AL+ + K +P+ I +I G C + + S
Sbjct: 494 VVPDL-VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMS 550
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
A + +++ Q L++ +N+++N + L E++ M + GV D ++ L+
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN A ++ + + LK DV TY+T++ F + ++ DM+S
Sbjct: 611 NGYXKDGNMNKAVTLF----EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 666
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ PN I++ LIN N G V +A L++EM++ G E CN +++ A +
Sbjct: 667 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 726
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A + +SNM K
Sbjct: 727 A-----------------------DEFLSNMLLK------------------------GI 739
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + R AL+N+M GL P+ I++ ++++ G ++ A
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 799
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
I+ M E G++PD YT+ I V LK+AF + +EM P+
Sbjct: 800 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 169/402 (42%), Gaps = 63/402 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N N VF+ L+ V A L+ E ++ ++ G+ + + N LL G LA
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
EIY EV + ++++V+T + ++ + + DM GV P+ +T+++
Sbjct: 343 WEIYQEV----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LINA GL+E+A L + M G +P N ++ + ++ RA
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA----------- 447
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G D + + P T TYNIL+
Sbjct: 448 ---------KGVLDEM---------------------------LKIGMSPDTATYNILLV 471
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CC + + A + +EM + G+ P+ +S++ LI +G ++ AL+ + M+ G++P
Sbjct: 472 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V YT I R+ + +A + +EM ++VTY T+L + L E +
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE-- 589
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
++ +M + G + LI G +D N N+ VTL
Sbjct: 590 -LFTEMTERGVFPDFYTFTTLI----NGYXKDGNMNKA-VTL 625
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 606 FTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 663
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 782
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 783 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 843 GFVPDDK 849
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 76/450 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ + R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSSAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V EDM+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH +Q + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEQLV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR +G +P+ +++T++ID+ G + A ++L+ M + G+ P ++A++ I
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R A + F+ M ++P+ + Y+ +L +R G + ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG---DTEKMLCLYRKMMNDN 533
Query: 652 YKANDTYLKELI-----EEWC---EGVIQD 673
Y+ +D + L+ E+ C E VIQD
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEVIQD 563
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 37/381 (9%)
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
QN L Y+ L + A +V+ +MQ +G+ A + Y ++ C G A
Sbjct: 672 GQNCNLYEYLITCL--IEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETA 729
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMA-LKVKEDMLSAGVTPNTITW 401
+ + + + L++ + I+ + + K WQ A + VK ++G+ + W
Sbjct: 730 HRLMDDA----LQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIW 783
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---- 457
++LI+A A +GL E+A +F+ M++ G P N +++A + + D + +
Sbjct: 784 NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQD 843
Query: 458 -SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
++ +SK+ V L D + E + ++PN H
Sbjct: 844 MNFKISKSTVLLLLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL-------------- 887
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y ++ C + V+ ++ EM G P+ L++ +GN + Q+ + +
Sbjct: 888 -YRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++ L
Sbjct: 947 LEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK-AEL 1005
Query: 635 HEVQQCLAVYQDMWKAGYKAN 655
E Q ++++M Y+ N
Sbjct: 1006 RE--QADQIFEEMRSKSYQLN 1024
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S++++ H +F +E+ M+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D+A N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSI--LEAG--LEPDEDTYNTLIVMYCRSFRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA +FEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ A +A L + + + T + + ++ +++ N N
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN------N 1085
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SS + S P +T ++ +K DY + EM+ G+ P+H WT I A
Sbjct: 1086 LKSSSLE--VSTLPYSTVFDAYLKN--GDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Query: 560 GSGNVEGALQILKIMREDG 578
A+ +LK +++ G
Sbjct: 1142 LCEQTADAILLLKSLQDCG 1160
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 150/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGKIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G E+Y V+ L+ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMN-FKISKSTVLLLLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+I+ + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++RS +
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEA----------------------------- 949
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + + L+NEM GL+P
Sbjct: 950 ------------------GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A QI + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G E + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVL 1083
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 210/475 (44%), Gaps = 68/475 (14%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKS 275
+ DIL ++ R A RA + ++ LS S N + +ID G +K
Sbjct: 41 QGDILLYGYL--INALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKG 98
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + N+ V++SL+N L+ + ++ M G+ A++ +YN L+ A
Sbjct: 99 LKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHA 158
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G L +E + +G+L DV T++T++ + Q A K+ E M+ G
Sbjct: 159 SCRFG---LWKEATRTFSQMVGEGILP-DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T++SL+N ++ A+ LFE M++ G + + N L+ + + + A
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LFR M++++ P
Sbjct: 275 TLFRK-----------------------MQYEE------------------------LTP 287
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TTY IL+KA + K L N M+ G SP+ ++T+L+D +G +E A+ +
Sbjct: 288 SITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVF 347
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++ P + Y+ I +++R + A +F+E+ + PN+VTY ++ +
Sbjct: 348 RSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKE 407
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR 686
G L E ++ ++ M ++G + ++ +I G +Q+ NQ Q + +R
Sbjct: 408 GKLLEAER---LFVQMEESGCEQDEISFNFII----RGFLQE-NQVQKAMEFLKR 454
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 33/355 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ M + G D+ Y L+ A A E++ + G + FTY
Sbjct: 29 LELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSG----NFFTYGL 84
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ LK+ +M++ G+ PN I +SSLIN G + +A++LF+EM+ G
Sbjct: 85 VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE----DYDGNTDRISNMEH 484
+ N N L+ A +C+F L++ T + +Q+ +GE D T I ++
Sbjct: 145 IKANVITYNSLIHA---SCRFG----LWKEATRTFSQM-VGEGILPDVVTFTTLIDHLSK 196
Query: 485 KDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K K Y F+ + P TYN L+ C + A L M
Sbjct: 197 KGK----------VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ + IS+ LI+ SG E A+ + + M+ + ++P + YT +K ++ R++
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A LF M+ P+L TY LL + G + E + V++ + YK +
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEA---IDVFRSLKSIKYKPS 358
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 53/322 (16%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
K G ++ + + L+K C G + A E++ ++ +G D+ Y ++
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQG----DILLYGYLINALRKT 57
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ + A+++ MLS + N T+ +I++ GL + + +F EM+ G PN
Sbjct: 58 RQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVY 117
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ L+ + A LF Q I
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMV--------------------------SQGI------ 145
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
K TYN L+ A C + ++M G+ P+ +++T L
Sbjct: 146 ---------------KANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID G V+ A +I ++M + G +P++V Y + + ++ A LFE M I
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250
Query: 615 QPNLVTYITLLRARSRYGSLHE 636
+ ++++Y TL+ G E
Sbjct: 251 KIDVISYNTLINGYCTSGKTEE 272
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 31/302 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ A A W+ A+ + +DML A + P+ T+++++NAC AG ++A+
Sbjct: 185 KPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALE 244
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M++ G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 245 LCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYF--------EMMKGANIAPDTFTL 296
Query: 480 SNM--------EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDY 529
+ + +H D + N S +KR P TY ++ + C
Sbjct: 297 NIVIHCLVKVGQHGDAVDLLN----------SMREKRVQCSPDVVTYTSIIHSYYVCGQV 346
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA+ + M G+ PN +S+ L+ A G A I K+++++G+ PDVV+YTT
Sbjct: 347 ENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTL 406
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ RS + ++A +F EM+ +PN V+Y L+ A YGS ++ +++ +M K
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDA---YGSAGMFKEAISLLHEMEK 463
Query: 650 AG 651
G
Sbjct: 464 DG 465
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 172/417 (41%), Gaps = 64/417 (15%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL+N +A ++ + + +M + + A+YN ++
Sbjct: 171 QARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVV 230
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ F + + A E M
Sbjct: 231 NACGAAGNWKKALEL---CKKMIRNGV-GPDLVTHNIVLSAFKNGFQYTKATGYFEMMKG 286
Query: 392 AGVTPNT-------------------------------------ITWSSLINACANAGLV 414
A + P+T +T++S+I++ G V
Sbjct: 287 ANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQV 346
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E +F+ M+ G +PN N LL A AF +F+ L K Q L D
Sbjct: 347 ENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFK---LLK-QNGLRPDVVS 402
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTD--YY 530
T + N + Q P F+ ++ S KP +YN L+ A + +
Sbjct: 403 YTTLL-NAYGRSAQ---------PEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFK 452
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+L++EM G+ P+ +S + L+ ACG +L+ + G+ ++VAY + I
Sbjct: 453 EAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGI 512
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++A L+ M + P+ VTY L+ + G E L ++DM
Sbjct: 513 GSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAE---SLKFFEDM 566
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 18/338 (5%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M GV ++ SYN LL A G + E +G K L+ G L+ DV +Y+T++
Sbjct: 352 VFDMMVAEGVKPNIVSYNALLGAYASHG---MHTEAFGIFKLLKQNG-LRPDVVSYTTLL 407
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + A +V +M PN +++++LI+A +AG+ ++A+ L EM + G
Sbjct: 408 NAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIP 467
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + LL AC Q + + + ++ + G +S +++ +
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
Y++ + P TYNIL+ C Y +M + +
Sbjct: 528 -----------YATMMAS-NVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTK 575
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ LI + + A M+ G PDV+ YT I+ + LF+E
Sbjct: 576 EVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ I P+ + +L+ A ++ V Q + D
Sbjct: 636 MEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHD 673
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 173/436 (39%), Gaps = 40/436 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + N V G + AL ++ P++ ++ Y K+
Sbjct: 219 IPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKAT 278
Query: 277 AIYEDLRSQNV-----TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+E ++ N+ TLNI V + L+ V H L +++ D+ +Y ++
Sbjct: 279 GYFEMMKGANIAPDTFTLNI-VIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSII 337
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ + G + ++ + A+GV K ++ +Y+ ++ +A A + + +
Sbjct: 338 HSYYVCGQVENCKAVF---DMMVAEGV-KPNIVSYNALLGAYASHGMHTEAFGIFKLLKQ 393
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +++++L+NA + E+A +F EM + C+PN N L+ A A F
Sbjct: 394 NGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKE 453
Query: 452 AFRLFRSW----------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A L ++S A G T +I + K NS
Sbjct: 454 AISLLHEMEKDGIPPDVVSISTLLAACGRCR--QTTKIDTVLEAAKFRGIELNIVAYNSG 511
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S+ SF DY + L M ++P+ +++ ILI
Sbjct: 512 IGSY---LSF---------------GDYEKALKLYATMMASNVNPDAVTYNILISGLCKL 553
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +L+ + M + + Y++ I V+ +L +A S F MK P+++TY
Sbjct: 554 GKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTY 613
Query: 622 ITLLRARSRYGSLHEV 637
+++A + +GS V
Sbjct: 614 TAMIQAYTDHGSWTSV 629
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 48/261 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K + E + + + LNI +NS + ++ D + L++
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV---------------LAQEIYGEVK----- 351
Y M V D +YNIL+ C G L +E+Y +
Sbjct: 528 YATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 587
Query: 352 ------------HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+++A G DV TY+ +++ + D W + ++M + P+ I
Sbjct: 588 QDKLAEAESTFINMKASGCFP-DVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAI 646
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
SSL+ A + + L + M + QC + +A E + + R W
Sbjct: 647 ICSSLMEALNKGNQYGRVLQLMKFM-------HDQCIQLNQKAYFEIIA---SCSMLRDW 696
Query: 460 TLSKTQVALGEDYDGNTDRIS 480
KT + E D + IS
Sbjct: 697 ---KTASEIIEHLDSSLPSIS 714
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 165/337 (48%), Gaps = 24/337 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M +G D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILI 56
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + A V ++M G+ N + ++ LI+A V+ A+++F +M GC+
Sbjct: 57 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 116
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQ 488
P+ N L+ + +F+ A L++ L E NT + + H +
Sbjct: 117 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRG 168
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
++ V D F P TYN L+KA C + + AL +M + GL+
Sbjct: 169 AMQEALKLVN-------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 221
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+IS ILI+ +GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +L
Sbjct: 222 PNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 281
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F++++ I P+ +TY TL+ + G + L+
Sbjct: 282 FDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 26 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 85
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 86 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF---EEALGLY 142
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 143 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 201
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R
Sbjct: 202 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR------------- 248
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS---------FDKR--FSFKPTTTTYN 519
+M H+ T N + N + FDK P TYN
Sbjct: 249 ----------DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
L+ C + + L++ G PN ++W IL+
Sbjct: 299 TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 336
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C Y V A LMNEM+ G PN I++TILID G +E A +
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G++ + V Y I + ++++ A ++F +M +P++ T+ +L+ +
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+++ ++ L +YQDM G AN LI +
Sbjct: 132 ---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 164
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 17/286 (5%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E MLS G P+ T+++LI G + A L EM GCEPN IL+
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ + + A + +S +AL + G IS + +K + + N +
Sbjct: 61 KEGRLEEARNVLDE--MSGKGLAL--NAVGYNCLISALCKDEK--VQDALNMFGDMSSKG 114
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP T+N L+ C + L +M G+ N I++ LI A G
Sbjct: 115 C------KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 168
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ AL+++ M G D + Y IK R+ +++ +LFE+M + PN ++
Sbjct: 169 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 228
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ R G+ +Q L +DM G + LI C+
Sbjct: 229 ILINGLCRTGN---IQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 271
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 61/422 (14%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D GD K RAI
Sbjct: 497 VVYTSLIRNFFMHGRKED---GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED++ ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A E+ E+K V TY +I+ A A + E+ S G+
Sbjct: 614 SGKLDKAYEVLEEMKVKRVPPT----VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL 669
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N I +SSLI+ G +++A + EEM++ G PN N L+ A V+A + + A F
Sbjct: 670 NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICF 729
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P T
Sbjct: 730 QSM-----------------------------------------------KEMKCSPNTY 742
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+IL+ C Y + EM+ GL PN +++T +I GN+ A + +
Sbjct: 743 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G +PD ++ I+ + R +A+ +FEE + + N+ I+LL A ++ L
Sbjct: 803 KANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECL 862
Query: 635 HE 636
+
Sbjct: 863 EQ 864
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 135/648 (20%), Positives = 271/648 (41%), Gaps = 72/648 (11%)
Query: 38 FPLASSSSLSSIPTVHSSQTALLSTVRRDLSS---------------RNDYYADMASKLA 82
F LASS++ S P + A+L + DL++ N AD+ S L
Sbjct: 100 FFLASSAA-SPHPLPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALV 158
Query: 83 KDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNEL 142
+ RL++ E V+ + + KF S V G + R+ + + +L+++ E+
Sbjct: 159 RTRRLDD----AERVIAAMRRL-KFRPAFSAYTVLIGAMAEARQP--ERALELLRQMQEV 211
Query: 143 GVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV 202
G G L + L G VE G + +++E + L+ + + +C+
Sbjct: 212 GYE-------VGVPLFTTLVRALAREGRVE---GALALVDEVKGSC--LEPDIVLYNVCI 259
Query: 203 N----KPDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
+ +V++A ++ + + D+ + + + K L A + + +
Sbjct: 260 DCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P Y T+I G G + + + + L+ + ++ FNS++ K L +
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K + ++YNI++ C+AG A I E++H G+ ++ T + +V
Sbjct: 380 FEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEH---AGLFP-NLLTVNIMVD 434
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK ++ A ++ E G PN++T+ SLI+ G V+ A LFE ML G
Sbjct: 435 RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNA 494
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQS 489
N L++ + + ++F+ Q + L Y + ++E K +
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVE-KGRAI 553
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
+ K + F P +Y+IL+ ++ + M+ G + +
Sbjct: 554 FEDI-------------KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALD 600
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ ++D SG ++ A ++L+ M+ + P V Y + I + RL +A+ LFE
Sbjct: 601 ARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFE 660
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
E K I+ N++ Y +L+ +G + + + + ++M K G N
Sbjct: 661 EAKSKGIELNVIVYSSLIDG---FGKVGRIDEAYLILEEMMKKGLTPN 705
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 156/368 (42%), Gaps = 50/368 (13%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + MQ++G + + L++A G A + EVK L+ D+ Y+
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK----GSCLEPDIVLYN 256
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ F A MA K ++ S G+ P+ ++++S+I AG + +A LF +M
Sbjct: 257 VCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETE 316
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P + N ++ A QF+ A++L D++ K++
Sbjct: 317 RAVPCAYAYNTMIMGYGSAGQFENAYKLL--------------------DQL-----KER 351
Query: 488 QSITNTPNFVPNSHYSSFDKRFSF--------------KPTTTTYNILMKACCTDYYRVK 533
I + +F NS + K+ +P ++TYNI++ C +
Sbjct: 352 GCIPSVVSF--NSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEE 409
Query: 534 ALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A M +EM GL PN ++ I++D + E A ++ + + G +P+ V Y + I
Sbjct: 410 AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLID 469
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + A+ LFE M N V Y +L+R +G + + ++++M + G
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK---IFKEMNRRG 526
Query: 652 YKANDTYL 659
+ + T L
Sbjct: 527 CQPDLTLL 534
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 15/255 (5%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + + + K L A ++ +K N+ + ++ID G G ++
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I E++ + +T N+Y +NSLM+ V A ++ L +++M+++ + +Y+IL+
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ K L +V TY+T++ A A + E + G
Sbjct: 752 CRVQKYNKAFVFWQEMQ----KQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGG 807
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEACQF 449
TP+ ++++LI ++A +A H+FEE GC N + C LL A C+E
Sbjct: 808 TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAV 867
Query: 450 ----DRAFRLFRSWT 460
+ R F WT
Sbjct: 868 VGFGENTVRHFFQWT 882
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 148/378 (39%), Gaps = 57/378 (15%)
Query: 294 FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+N+++ +HDL +V + M LG + L+ A A+ + ++ L
Sbjct: 117 YNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRL 176
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ + Y+ ++ A+A+ + AL++ M G +++L+ A A G
Sbjct: 177 KFRPAFS----AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGR 232
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
VE A+ L +E+ + EP+ N+ + +A D A++ F K+Q
Sbjct: 233 VEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL---KSQ-------- 281
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
KP +Y ++ C +
Sbjct: 282 ------------------------------------GLKPDDVSYTSMIWVLCKAGRLSE 305
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L +M T P ++ +I G +G E A ++L ++E G P VV++ + +
Sbjct: 306 AEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILT 365
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +++ +A +LFE MK +PN TY ++ G +V++ + +M AG
Sbjct: 366 CLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAG---KVEEAYMIRDEMEHAG 421
Query: 652 YKANDTYLKELIEEWCEG 669
N + +++ C+
Sbjct: 422 LFPNLLTVNIMVDRLCKA 439
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 76/450 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ + R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSSAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V EDM+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH +Q + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEQLV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR +G +P+ +++T++ID+ G + A ++L+ M + G+ P ++A++ I
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R A + F+ M ++P+ + Y+ +L +R G + ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG---DTEKMLCLYRKMMNDN 533
Query: 652 YKANDTYLKELI-----EEWC---EGVIQD 673
Y+ +D + L+ E+ C E VIQD
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEVIQD 563
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 164/380 (43%), Gaps = 37/380 (9%)
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
QN L Y+ L + A +V+ +MQ +G+ A + Y ++ C G A
Sbjct: 673 QNCNLYEYLITCL--IEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAH 730
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMA-LKVKEDMLSAGVTPNTITWS 402
+ + + + L++ + I+ + + K WQ A + VK ++G+ + W+
Sbjct: 731 RLMDDA----LQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWN 784
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----- 457
+LI+A A +GL E+A +F+ M++ G P N +++A + + D + +
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ +SK+ V L D + E + ++PN H
Sbjct: 845 NFKISKSTVLLLLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL--------------- 887
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y ++ C + V+ ++ EM G P+ L++ +GN + Q+ + +
Sbjct: 888 YRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++ L
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK-AELR 1006
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
E Q ++++M Y+ N
Sbjct: 1007 E--QADQIFEEMRSKSYQLN 1024
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S++++ H +F +E+ M+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D+A N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSI--LEAG--LEPDEDTYNTLIVMYCRSFRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA +FEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ A +A L + + + T + + ++ +++ N N
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN------N 1085
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SS + S P +T ++ +K DY + EM+ G+ P+H WT I A
Sbjct: 1086 LKSSSLE--VSTLPYSTVFDAYLKN--GDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Query: 560 GSGNVEGALQILKIMREDG 578
A+ +LK +++ G
Sbjct: 1142 LCEQTADAILLLKSLQDCG 1160
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 150/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGKIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G E+Y V+ L+ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMN-FKISKSTVLLLLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+I+ + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++RS +
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEA----------------------------- 949
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + + L+NEM GL+P
Sbjct: 950 ------------------GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A QI + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G E + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVL 1083
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 61/339 (17%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKN 314
Y T+I CG ++ + ++RS+ + N++ +++LMNV A++L +VYK
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---KGVLKLDVFTYSTIVK 371
M + G ++ +YNIL+ + ++ E + L + ++ +V TY+T++
Sbjct: 61 MLEEGCSPNLVTYNILI-------DVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVIS 113
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ALKV E ML+AGV P+ T+++LI+A G VE+A+ +F +M++ GCE
Sbjct: 114 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCER 173
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N + L+ AC +A +++ A LF S M HK+
Sbjct: 174 NVITYSSLISACEKAGRWEMALELF-----------------------SKM-HKE----- 204
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+ KP TYN L+ AC + KA L +M+T G P+ I
Sbjct: 205 ------------------NCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSI 246
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
++ LI A G AL+ + M+ G PD + +
Sbjct: 247 TYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNS 285
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 21/292 (7%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+T++ + + AL++ +M S G+ N T+S+L+N C A ++ A ++++
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML+ GC PN NIL+ VEA + R + L ++ + E NT + +
Sbjct: 61 MLEEGCSPNLVTYNILID--VEASKRKTTERRRLAVALVRSGIQ-AEVRTYNT--VISAC 115
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+K Q P ++K + KP+ TTY L+ A KAL +M
Sbjct: 116 NKSGQ---------PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G N I+++ LI AC +G E AL++ M ++ P+VV Y + I C
Sbjct: 167 IRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHW 226
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A LFE+M+ +P+ +TY L+ A R G + ++ L ++ M G
Sbjct: 227 EKASELFEQMQTQGCKPDSITYCGLITAYERGG---QWRRALKAFEQMQSQG 275
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 147/338 (43%), Gaps = 55/338 (16%)
Query: 292 YVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y + ++++ +H L+ LE+ M+ G+ ++ +Y+ L+ C A LAQ++Y
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY-- 58
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
K + +G ++ TY+ ++ V A + ++ ++ +G+ T++++I+AC
Sbjct: 59 -KQMLEEGC-SPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACN 116
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+G EQA+ ++E+ML AG +P++ L+ A + Q ++A +FR
Sbjct: 117 KSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFR------------ 164
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CT 527
D I R + TY+ L+ AC
Sbjct: 165 -------DMI----------------------------RRGCERNVITYSSLISACEKAG 189
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ L ++M PN +++ LI AC G+ E A ++ + M+ G PD + Y
Sbjct: 190 RWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYC 249
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I R + ++A FE+M+ P+ + +L+
Sbjct: 250 GLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKL 318
T+I C G ++ +YE + + V + + +L++ ++ L+++++M +
Sbjct: 110 TVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRR 169
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G ++ +Y+ L+ AC AG +A E++ ++ K K +V TY++++ +
Sbjct: 170 GCERNVITYSSLISACEKAGRWEMALELFSKMH----KENCKPNVVTYNSLIAACSHGGH 225
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A ++ E M + G P++IT+ LI A G +A+ FE+M GC P++ N
Sbjct: 226 WEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNS 285
Query: 439 LL 440
L+
Sbjct: 286 LM 287
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ LM C + + + +M G SPN +++ ILID ++ +
Sbjct: 37 TYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVAL 96
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ +V Y T I C +S + +QA ++E+M ++P+ TY L+ A YG
Sbjct: 97 VRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISA---YGKK 153
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+V++ L +++DM + G + N LI
Sbjct: 154 GQVEKALDIFRDMIRRGCERNVITYSSLI 182
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 47/412 (11%)
Query: 286 NVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
NV L++Y F ++ V D F EV M+++G+ ++ Y L+ CC G+
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGF--EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++++ ++ L+ + +TY+ ++ F + +++ E M G+ PN T+
Sbjct: 204 RGKQLFYKMGELDVVA----NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
+S+I C N G + A LF+EM + G N N L+ + + A RL +
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 459 WTLSKTQVALGEDYDG-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LS ++ DG N D+ S++ ++ K S P
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS--------------------GQSP 359
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYNIL+ + V ++ EM GLSP+ +++TIL+DA S N+E A QI
Sbjct: 360 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 419
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + G+ D+ Y I +K+A LF+ + ++PN V Y T++ +
Sbjct: 420 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 479
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
GS + + L + ++M + G N I C +D+ + EV L
Sbjct: 480 GSSY---RALRLLKEMGENGMVPNVASYNSTIXILC----KDEKWTEAEVLL 524
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 176/383 (45%), Gaps = 26/383 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + T+ID C GD + + ++ + +V N Y + L+N K +E
Sbjct: 183 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 242
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ G++ ++ +YN ++ CC G A E++ E++ +GV +V TY+T++
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE---RGV-ACNVVTYNTLI 298
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ M G++PN I++++LI+ + G +++A LF +M +G
Sbjct: 299 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ NIL+ EA R + LS ++V D R N+E +
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV-RSDNIEKAFQ 417
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
YSS +K Y +L+ C D L + + L
Sbjct: 418 I-------------YSSMEKA-GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 463
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++LK M E+GM P+V +Y + I + + ++ +A L
Sbjct: 464 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVL 523
Query: 606 FEEMKHYQIQPNLVTYITLLRAR 628
++M ++P++ + + +AR
Sbjct: 524 LKDMIELGLKPSISIWNMISKAR 546
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 133/318 (41%), Gaps = 21/318 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG +KLDV+++ ++K + + +V M G++PN + +++LI+ C G
Sbjct: 142 ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 201
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+ LF +M + N +L+ F L K + L E
Sbjct: 202 IERGKQLFYKMGELDVVANQYTYTVLING-------------FFKMGLKKDGIELYEKMK 248
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
T + N+ + + N+ + FD + TYN L+ C +
Sbjct: 249 -LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 307
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++A LM M+ GLSPN IS+ LID GN++ A + M+ G SP + Y
Sbjct: 308 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 367
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I +K + EM+ + P+ VTY L+ A R + +++ +Y M K
Sbjct: 368 IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN---IEKAFQIYSSMEK 424
Query: 650 AGYKANDTYLKELIEEWC 667
AG A+ LI C
Sbjct: 425 AGLVADIYIYGVLIHGLC 442
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 110/249 (44%), Gaps = 45/249 (18%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R ++ A R K+ SPN+ T+ID G C G+ K+ +++ ++S + +
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLID--GYCSIGNLDKASSLFNQMKSSGQSPS 360
Query: 291 IYVFNSLMN-------------------------------------VNAHDLKFTLEVYK 313
+ +N L+ V + +++ ++Y
Sbjct: 361 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 420
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K G++AD+ Y +L+ C+ G+ A +++ + + LK + Y+T++ +
Sbjct: 421 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH----LKPNDVIYNTMIYGY 476
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL++ ++M G+ PN +++S I +A L ++M++ G +P+
Sbjct: 477 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSI 536
Query: 434 QCCNILLQA 442
N++ +A
Sbjct: 537 SIWNMISKA 545
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 52/430 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 286
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 407 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ RL A + +M PN+VTY ++ R G E ++ L + M + G
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG---ESEKALKLLSLMEEKGCSP 582
Query: 655 NDTYLKELIE 664
N LI+
Sbjct: 583 NVVTYTALID 592
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 43 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 96 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 469 --------GEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 396 YGALVDGLCKAGNI 409
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 532
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 533 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 569
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 594 VRSKRLKQAFSLFEEMKH 611
+ L +A L EMK
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 156/390 (40%), Gaps = 59/390 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 432 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 545
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 644
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
T P ++ Y ++ + ++ EM
Sbjct: 645 --------MKQTYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 678
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++AF L+ EM P L ++ L++
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 650
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 651 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 705 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 507 KRFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F ++P+ TYN L++ + +RV+ EM G + + A
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ---KEMSESGFCMDRFTVGCFAHALCKE 88
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G AL +++ RED D V T I + + +A S M+ PN+VTY
Sbjct: 89 GRWADALDMIE--RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TLL S + ++ C + M G N + L+ +C
Sbjct: 146 RTLL---SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 193/429 (44%), Gaps = 44/429 (10%)
Query: 251 LSSPNMYICRTIIDVCGIC-----GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAH 303
+S+ N+YI G+C GD ++ +++ +R N +N+L++ N
Sbjct: 50 ISTFNIYIS-------GLCRASRIGD---AQTVFDGMRKHGFWPNRITYNALLSGLCNGG 99
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLD 362
+ +Y+ M K G D+ +YN LL C G A +I+ G VK +G + D
Sbjct: 100 RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVK----RGFVP-D 154
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+ ++ F A A ++ + M+S + P+ +T++SL+N G V++A L
Sbjct: 155 VVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML-- 212
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++ G PN + L+ C E + + A +L L+ + D I
Sbjct: 213 -IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK----PDIVSYNALIHG 267
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ + Q ++ + R ++P TYNIL+ + +A L + +
Sbjct: 268 LARE--QGVSEALKLFGSVL------RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 319
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL P+ I++T+ ID +G VE AL +LK M E G PDVV++ I + KR+
Sbjct: 320 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 379
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A L M+ PN +++ TL+ + R G ++ + +++M K G K
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW---KKAMTTFKEMLKRGVKPTVVTY 436
Query: 660 KELIEEWCE 668
L++ C+
Sbjct: 437 NILVDGLCK 445
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 173/426 (40%), Gaps = 68/426 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMK---SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT- 308
SPN+ T+I G+C + + +R + E + +I +N+L++ A + +
Sbjct: 219 SPNVITYSTLIS--GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276
Query: 309 -LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTY 366
L+++ ++ + G ++ +YNIL+ A E++ G VKH L+ D TY
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH-----GLEPDAITY 331
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A + AL + +DM G P+ ++ +++IN V++A L M
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC PN+ N L+ A ++ +A F+
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML-------------------------- 425
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK---ALMNEMRT 541
KR KPT TYNIL+ C R+K L + M
Sbjct: 426 --------------------KR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ ++++ LID G +G ++ A ++L M G P+V Y + I ++ +
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LF M P+ +TY T++ A + V + LA++ +AG
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQ---EMVDKALALFDGSLEAGVVPTSGMYFS 581
Query: 662 LIEEWC 667
LI+ C
Sbjct: 582 LIDGLC 587
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 167/438 (38%), Gaps = 71/438 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV----TLNIYVFNSLMNVNAHDLKFT 308
SP+ Y ++ G K+ E L + + T NIY+ D +
Sbjct: 13 SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQ-- 70
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
V+ M+K G + +YN LL C G AQ +Y + K DV TY+T
Sbjct: 71 -TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM----IKAGYSPDVVTYNT 125
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F ALK+ + + G P+ +T+++LIN A +++A + + M+
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ N L+ + + D A L
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLI-------------------------------- 213
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
DK FS P TY+ L+ C + R+++ L+ +M G
Sbjct: 214 ----------------VDKGFS--PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK 255
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +S+ LI V AL++ + G P+V Y I ++ R+ +AF L
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F + + ++P+ +TY + + G V+ L + +DM + G + +I
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 666 WCEGVIQDKNQNQGEVTL 683
C ++K ++ EV L
Sbjct: 373 LC----KEKRVDEAEVLL 386
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 13/212 (6%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDL 305
SPN T+I CG C G + K+ ++++ + V + +N L++ +
Sbjct: 395 SPNAISFNTLI--CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K + ++ M + G + D+ +Y+ L+ AG A+ + G +EAKG + +V+T
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA---MEAKGCIP-NVYT 508
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ AL++ M+ G P+TIT+ ++I+A +V++A+ LF+ L
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+AG P S L+ + D A +L +
Sbjct: 569 EAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 174/414 (42%), Gaps = 47/414 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+ I G + + + +++ + + ++ F++L+N + KF E+
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M ++ +Y+ ++ C A+ ++ +L D+ T++T++
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMF----YLTPTKGCSPDIITFNTLIA 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +K+ +M AG+ NTIT+++LI+ G + A L +EM+ +G P
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N CN LL + + A +F++ SK + ++G
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SPDVV + T I ++ + LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
I + +TYITL+ + + + L ++Q+M +G + ++ ++
Sbjct: 606 GQRGIVADAITYITLIYG---FRKVDNIDGALDIFQEMISSGVYPDTITIRNML 656
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 196/477 (41%), Gaps = 87/477 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + PN TI+D G+C GD + + +
Sbjct: 183 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD--GMCKMGDTVSALNLL 240
Query: 280 EDLRS-QNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++ N+ ++N++++ +AH+L + MQ+ + D+ +YN +
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNL------FIEMQEKEIFPDIVTYNCM 294
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C++G A+++ E+ LE K + DV T+S ++ F + A ++ ++ML
Sbjct: 295 INGFCISGRWSDAEQLLQEM--LERK--INPDVVTFSALINAFVKEGKFFEAEELYDEML 350
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ P+T+T+SS+I+ ++ A H+F GC P+ N L+ A + D
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+L T V N
Sbjct: 411 DGIKLLHEMT--------------------------------EAGLVAN----------- 427
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
T TY L+ C D + L+ EM + G+ PN ++ L+D +G ++ AL
Sbjct: 428 ----TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483
Query: 569 QILKIMRE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ K M++ +G+ PDV Y I + + +A L+EEM H I P+
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+TY +++ + L E Q ++ M + + LI +C+ G++ D
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQ---MFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 56/319 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ ++K M+ L + + S+ IL+K C A +G++ L V T++T
Sbjct: 101 ISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG----FHPTVVTFNT 156
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ AL D+ PN +T+++L+N G V +A+ L + ML+ G
Sbjct: 157 LLHGLCVEDRISEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 212
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN ++ + A L R ++ + H
Sbjct: 213 LQPNQITYGTIVDGMCKMGDTVSALNLLR--------------------KMEEVSH---- 248
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+PN YN ++ D A L EM+ + P
Sbjct: 249 -------IIPN---------------VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ +I+ SG A Q+L+ M E ++PDVV ++ I V+ + +A L+
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELY 346
Query: 607 EEMKHYQIQPNLVTYITLL 625
+EM I P+ VTY +++
Sbjct: 347 DEMLPRSIIPSTVTYSSMI 365
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V +L +M + + N S+TIL+ + AL + + G P VV + T +
Sbjct: 100 VISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLH 159
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ +A LF +M +PN+VT+ TL+ R G V + +A+ M + G
Sbjct: 160 GLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREG---RVVEAVALLDRMLEDG 212
Query: 652 YKANDTYLKELIEEWCE 668
+ N +++ C+
Sbjct: 213 LQPNQITYGTIVDGMCK 229
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ ILMK C+ AL ++ +G P +++ L+ + AL + M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
P+VV +TT + R R+ +A +L + M +QPN +TY T++ + G
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 231
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 171/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 227 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + Q + KP TYN
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQR--------------------NLKPDVVTYNT 382
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 537
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 194/452 (42%), Gaps = 27/452 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 146
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 147 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT--TTT 517
L D T I N V + D+ T
Sbjct: 264 K----NAGLAPDNVIYTILIGGF----------CRNGVMSEALKVRDEMLEQGCVLDVVT 309
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C + +A L EM G+ P+ ++T LI+ GN+ A+ + ++M
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 369
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PDVV Y T I + +++ L+ +M +I PN ++Y L+ Y ++
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING---YCNMG 426
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V + ++ +M + G++A +++ +C
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 458
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 68/410 (16%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 37 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 96
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 97 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 152
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 209
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 210 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 238
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 239 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 283
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
T+ TL+ S+ G+++ + + +++ M + K + LI+ +C+G
Sbjct: 344 TFTTLINGYSKDGNMN---KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 390
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + F + K L AL+ + K +P+ I +I G C + + S
Sbjct: 233 VVPDL-VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMS 289
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
A + +++ Q L++ +N+++N + L E++ M + GV D ++ L+
Sbjct: 290 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN A ++ + + LK DV TY+T++ F + ++ DM+S
Sbjct: 350 NGYSKDGNMNKAVTLF----EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 405
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ PN I++ LIN N G V +A L++EM++ G E CN +++ A +
Sbjct: 406 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 465
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A + +SNM K
Sbjct: 466 A-----------------------DEFLSNMLLK------------------------GI 478
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + R AL+N+M GL P+ I++ ++++ G ++ A
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
I+ M E G++PD YT+ I V LK+AF + +EM P+
Sbjct: 539 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 402
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 521
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 522 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 582 GFVPDDK 588
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 188/410 (45%), Gaps = 23/410 (5%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
D + HL S PN+ +I ++ + E++R + N+ +N L++
Sbjct: 164 DGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ +V K M + G ++ ++N L+ C GN A+++ G + AKG
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG---IMVAKG- 279
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ +V TYS ++ ++ + A +V E+M + GVTP+ T+S+LI+ A +E+A
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ M +GC P+ + ++ A ++ + A + + + + Y+ D
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV-VTYNTVIDG 398
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ + + + + P TY+ ++ C V+A L+
Sbjct: 399 LCKLGKIAEAQVI----------LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G +P+ +++T +ID G +E A +L+ M+ G +P+VV YTT I ++
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+++ +A + EEM++ PNLVTY T++ G + E QQ + +D
Sbjct: 509 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 166/382 (43%), Gaps = 66/382 (17%)
Query: 270 GDYMKSRAIYE---DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMAS 326
GD +S + D+ S N+ ++ + NA DL LE+ + M+ G D +
Sbjct: 97 GDLFRSELLASCEPDVCSYNIVISGFC-------NAGDLHAALELLEEMKSAGFAPDAFT 149
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+ ++ A AG+ + G + HL + G +V TY+ ++ FA AK + A+K+
Sbjct: 150 HTPIITAMANAGD------LDGAMDHLRSMGC-DPNVVTYTALIAAFARAKKLEEAMKLL 202
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M G PN +T++ L++A +V A + ++M++ G PN N L+ +
Sbjct: 203 EEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKR 262
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D A +L VA G
Sbjct: 263 GNVDDARKLL------GIMVAKG------------------------------------- 279
Query: 507 KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+P TY+ L+ C + K ++ EM+T G++P+ +++ LI + +
Sbjct: 280 ----MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKI 335
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A Q+L+ M G +PDVV Y++ I +S +L +A +EM+ + P++VTY T+
Sbjct: 336 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTV 395
Query: 625 LRARSRYGSLHEVQQCLAVYQD 646
+ + G + E Q L Q+
Sbjct: 396 IDGLCKLGKIAEAQVILEQMQE 417
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV +Y+ ++ F +A AL++ E+M SAG P+ T + +I A ANAG ++ AM
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M GC+PN L+ A A + + A +L
Sbjct: 171 RSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLE------------------------ 203
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
E +++ PN V TYN+L+ A C + + ++ +M
Sbjct: 204 -EMRERGC---PPNLV-------------------TYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G +PN +++ L+D GNV+ A ++L IM GM P+VV Y+ I +S++
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A + EEMK + P+ TY L+ + + E +Q L + M +G +
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML---RRMAGSGCTPDVVVY 357
Query: 660 KELIEEWCE 668
+I +C+
Sbjct: 358 SSIIHAFCK 366
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 157/367 (42%), Gaps = 64/367 (17%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C +++++ + E+++++ VT + + +++L++ A ++
Sbjct: 282 PNVVTYSALID--GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M G D+ Y+ ++ A C +G + AQ+ E++ K DV TY+T+
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR----KQRKSPDVVTYNTV 395
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ A + E M +G V P+ +T+S++IN + ++ +A L + M +AG
Sbjct: 396 IDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 455
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ ++ + + + A L +
Sbjct: 456 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM----------------------------- 486
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
KR P TY L+ C + +M EMR G P
Sbjct: 487 ------------------KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGM---SPDVVAYTTAIKVCVRSKRLKQAF 603
N +++ +++ SG ++ A Q+++ M+ DG SPD Y T + + S +++A
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSSDLVQEAE 587
Query: 604 SLFEEMK 610
L E+MK
Sbjct: 588 QLLEQMK 594
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + + F K L+ A + +K SP++ T+ID G+C G +++ I
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID--GLCKLGKIAEAQVIL 412
Query: 280 EDLR-SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E ++ S +V ++ +++++N + L ++ M K G D+ +Y ++ C
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ + +K + +V TY+T++ A+ A +V E+M +AG P
Sbjct: 473 CGRLEEAEYLLQGMK----RAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML--QAGCEPNS 433
N +T+++++N +G +++A L + M +A C P++
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 567
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 172/400 (43%), Gaps = 32/400 (8%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+F S ++ + +K L+V+ ++GV + ASYNI+ + C G V A ++ +
Sbjct: 222 LFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQL---LLQ 278
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E +G + DV +YST++ + Q LK+ E+M G+ PN T++ +I G
Sbjct: 279 MELRGCIP-DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKT 464
V +A + EM+ G P+ L+ + A+RLF ++ T
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397
Query: 465 QVALGEDYDGNTDRISNMEHK------DKQSITNTPNFVPNSHYSSFDKRFSFK------ 512
V G G + H+ + +T T + FS
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457
Query: 513 ---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TY L C + L++EM GL N ++ L++ +GN++ A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++K M G PD V YTT + +S+ + +A L +M ++QP +VT+ L+
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G L + ++ L + M + G N T LI+++C
Sbjct: 578 FCMSGMLEDGEKLL---KWMLEKGIMPNATTYNSLIKQYC 614
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 165/406 (40%), Gaps = 64/406 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN Y +I + G ++ + ++ S+ + + ++ +L++ ++ +
Sbjct: 321 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTI 369
+ MQK + D +Y ++ C G + A +++ E+ K LE D TY+ +
Sbjct: 381 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP------DEVTYTAL 434
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + ML G+TPN +T+++L + G V+ A L EM + G
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
E N N L+ +A D+A +L + ++
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA--------------------------- 527
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
F P TY LM A C V+A L+ +M L P
Sbjct: 528 --------------------GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLF 606
+++ +L++ SG +E ++LK M E G+ P+ Y + IK C+R+ ++ ++
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN-MRATTEIY 626
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
M + P+ TY L++ + ++ E +++DM G+
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEA---WFLHRDMVGKGF 669
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ + D CG+ + + ++ + + LNIY +NSL+N A ++ ++
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G D +Y L+ A C + V A E+ ++ E L+ V T++ ++
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE----LQPTVVTFNVLM 575
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + + K+ + ML G+ PN T++SLI + ++ M G
Sbjct: 576 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 635
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
P+ NIL++ +A A+ L R
Sbjct: 636 PDGNTYNILIKGHCKARNMKEAWFLHR 662
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M R + + + NV +N + + ++ LK+ LE G+M + +YN L+K
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK-------GIMPNATTYNSLIK 611
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+ N EIY + + AKGV+ D TY+ ++K A+ + A + DM+
Sbjct: 612 QYCIRNNMRATTEIY---RGMCAKGVVP-DGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
G ++++LI +A LFE+M + G + + NI
Sbjct: 668 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
E VG+ N S+ I+ + G V A Q+L M G PDV++Y+T I +
Sbjct: 243 EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVG 302
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
L++ L EEM+ ++PN TY ++ + G + E ++ L ++M G +
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL---REMISEGIAPDGV 359
Query: 658 YLKELIEEWCE 668
LI+ +C+
Sbjct: 360 IYTTLIDGFCK 370
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 43/370 (11%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M++ G + +YN+L+ C +G +E +G K +E G++ D FTY +
Sbjct: 243 KVLVEMRERGCGLNTVTYNVLIAGLCRSGAV---EEAFGFKKDMEDYGLVP-DGFTYGAL 298
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ A + ++M A + PN + +++LI+ G ++A + +EM+ AG
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN + L++ + Q DRA L + M +
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLK-----------------------QMVRDSHRP 395
Query: 490 ITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LM 536
T T N + H+ K+ +F+ P TY+I++ C KA L+
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 455
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM T GL PN + LI GNV A +I M + + PD+ Y + I +
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R++++ F +M+ + PN TY L+ + G L +Q + Q M G K ND
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ---LVQRMLDTGLKPND 572
Query: 657 TYLKELIEEW 666
+L+E +
Sbjct: 573 VIYIDLLESY 582
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 127/593 (21%), Positives = 246/593 (41%), Gaps = 106/593 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 269 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 324
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS----------------SPNMYICRTIIDVCG 267
VR+ + D ++ + +H S SPN+Y +I G
Sbjct: 385 LKQMVRD-SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH--G 441
Query: 268 IC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMAD 323
+C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ YN L+ G + + + + ++ +G+L + FTYS ++ + + A
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAE 557
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 558 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 617
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + AFR+ G + +G+ VP+ H
Sbjct: 618 SSSGNMEAAFRVLS-----------GIEKNGS---------------------VPDVH-- 643
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
Y+ L+ C R KA +++EM G+ PN + + LID S
Sbjct: 644 -------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
L S G L +Q + + ++M+ G+ A+ + L++ +C+ G +Q+
Sbjct: 751 SVLTTGCSSAGDL---EQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQE 799
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
++ K ++ EMR G N +++ +LI SG VE A K M + G+ PD Y
Sbjct: 237 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG 296
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I +S+R +A +L +EM +++PN+V Y L+ R G+ E + ++M
Sbjct: 297 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE---AFKMIKEM 353
Query: 648 WKAGYKANDTYLKELIEEWCE 668
AG + N L+ C+
Sbjct: 354 VAAGVQPNKITYDNLVRGLCK 374
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 213/504 (42%), Gaps = 82/504 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 369 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 428
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 429 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 488
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 489 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 548
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 549 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 661
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 662 --------------------------------------------KEMNLEPTDGTYNTLL 677
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 678 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 737
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 738 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 796
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+ Y + G K + + L+E
Sbjct: 797 IKDY--FLQPGSKTDRSSCHSLME 818
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 57/447 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 366
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 367 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 417 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 472
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 473 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 526
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 579
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L ++M
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL---EEM 696
Query: 648 WKAGYKANDTYLKELIEEWCE-GVIQD 673
+ + Y N +++ C+ G + D
Sbjct: 697 YHSNYPPNLITYNTILDCLCKNGAVND 723
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 171/383 (44%), Gaps = 56/383 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 845 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 903
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 904 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 959
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 960 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 1019
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 1020 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 1048
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
P +Y I++ C L ++ +GL P+ I+
Sbjct: 1049 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1092
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A ++EE+
Sbjct: 1093 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1152
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+PN+ TY L+R S GS
Sbjct: 1153 TKGWKPNVFTYNALIRGYSVSGS 1175
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 31/333 (9%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C + A E+ VK ++ GV L Y++++ D +A + +M
Sbjct: 851 LIKHLCKQKKALEAHEL---VKKFKSFGV-SLKTGLYNSLICGLVDENLIDIAEGLFAEM 906
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G P+ T++ L++A + +E+ + + EEM + G E N ++ V++ +
Sbjct: 907 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 966
Query: 450 DRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
++A L+ S S T G DG RI + E+ + +
Sbjct: 967 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-------------- 1012
Query: 505 FDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ K T YNIL+ + +V L +M G++P+ S+TI+ID +G
Sbjct: 1013 ---EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ L + + E G+ PD++ Y I +SKRL++A SLF EM+ I PNL TY
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+L+ + G E + +Y+++ G+K N
Sbjct: 1130 SLILHLGKAGKAAEAGK---MYEELLTKGWKPN 1159
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 186/460 (40%), Gaps = 65/460 (14%)
Query: 236 DLVSALRAYD-----------ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
D++ ALR+ D A++K + C ++++ G +++ ++
Sbjct: 184 DVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQR 243
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q V N+ F ++ + L+ M++ G++ + +YN L+ +G
Sbjct: 244 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 303
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+Y + + GV+ V TYS ++ F + + L + +M + GV PN +++
Sbjct: 304 ALEVY---RVMMVDGVVP-SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 359
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
I A ++A + +M GC+P+ +L+Q +A + A +F W +
Sbjct: 360 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF--WKMK 417
Query: 463 KTQVALGEDYDGNTDRISNM-------EHKDKQSITNTPNFVPNSHYSS----------- 504
K+ D DR++ + ++ D QS+ N + Y+
Sbjct: 418 KS--------DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 469
Query: 505 -------------FD--KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
FD K+ P +YN L+ + L M G PN
Sbjct: 470 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + I+ G SG A+Q ++M+ G+ PDVVA + +S RL A +F
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
E+K + P+ +TY +++ S+ E + ++ DM
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEA---VKIFYDM 626
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ TY++LM A D V L+ EM G+ PN S+TI I G + + A +I
Sbjct: 318 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 377
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M +G PDV+ +T I+V + R+ A +F +MK +P+ VTYITLL +
Sbjct: 378 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---DK 434
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+G + Q + ++ M GY N +I+ C+
Sbjct: 435 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 472
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ Y SP ++D G + ++ ++ N
Sbjct: 962 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 1021
Query: 293 VFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+N + A + + ++++M G+ D+ SY I++ C AG + ++
Sbjct: 1022 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 1081
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L+ D+ TY+ ++ +K + A+ + +M G+ PN T++SLI
Sbjct: 1082 LEMG----LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1137
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG +A ++EE+L G +PN N L++ + D A+ +
Sbjct: 1138 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1183
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
I G+ K +++D+ Q + +I + +++ A L L ++ + ++G+ D+
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+L+ G + +E ++ KG++ +++TY++++ A A K+
Sbjct: 1092 TYNLLIDGL---GKSKRLEEAVSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAEAGKM 1147
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
E++L+ G PN T+++LI + +G + A + M+ GC PN
Sbjct: 1148 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ ++++L+ A G +VE L +L+ M G+ P+V +YT I+V ++KR
Sbjct: 311 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 370
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A+ + +M++ +P+++T+ L++ G + + + V+ M K+ K +
Sbjct: 371 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD---VFWKMKKSDQKPDRVT 427
Query: 659 LKELIEEW 666
L++++
Sbjct: 428 YITLLDKF 435
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ IID G + L + ++ +N L++ + L+ +
Sbjct: 1052 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1111
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQK G++ ++ +YN L+ AG A ++Y E L KG K +VFTY+ ++
Sbjct: 1112 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE---LLTKG-WKPNVFTYNALI 1167
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ + A M+ G PN+ T SS ++ G V + + A E
Sbjct: 1168 RGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHRSYHNAK-E 1226
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
P ++ L + C+ A ++ W + V
Sbjct: 1227 PTTKAWRWLSKGCLRRAAAGNAQQIADGWRMHNHSV 1262
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ N ++ L+ SG AL++ ++M DG+ P V Y+ + + +
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ L EM+ + ++PN+ +Y +R + E + LA M G K +
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA---KMENEGCKPDVIT 392
Query: 659 LKELIEEWCE-GVIQD 673
LI+ C+ G I D
Sbjct: 393 HTVLIQVLCDAGRISD 408
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 176/402 (43%), Gaps = 35/402 (8%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 304 CTARKLDCAKEVFEKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
LF + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 480 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+G PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G ++Q+ + +++ M + G N L + C+
Sbjct: 582 GLGKNG---KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 233/538 (43%), Gaps = 99/538 (18%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + ID V+G+LK++ LG+ P + + +G +++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 282 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFEKMKTGRHKPD---RVT 330
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 331 YITLLDR-----------FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 496
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ GCEP+ N L+ +A +
Sbjct: 497 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 555 DEAWKMFMRM-----------------------------------------------KEM 567
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 41/362 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH G L + TY+ ++
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + S G P+ T++ L++A +G +++ L++EM CE N+
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 913
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
+ + +P YNIL+ KA D AL M G+
Sbjct: 914 FEGMLD-------------YGCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 958
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L K ++E G++PDVV Y I +S RL++A L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F EMK + I P+L TY +L+ G + E + +Y ++ +AG + N LI
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAGLEPNVFTFNALIR 1075
Query: 665 EW 666
+
Sbjct: 1076 GY 1077
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 170/395 (43%), Gaps = 61/395 (15%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G E+Y E+ E + + T++ ++ A AL + D++S
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEA----NTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE ML GC PN NIL+ +A + D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 944 AACALFKRMV--------------------------KEGV-------------------- 957
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P TY++L+ C + L E++ GL+P+ + + ++I+ G S +E AL
Sbjct: 958 -RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 569 QILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M+ G++PD+ Y + I + +++A ++ E++ ++PN+ T+ L+R
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
S G + + AVYQ M G+ N ++L
Sbjct: 1077 YSLSG---KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 25/349 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + D +Y + K+ + G L Q Y K E VL + ++Y+ ++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGG--LKQAPYALRKMREFGFVL--NAYSYNGLI 195
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +++ A++V M+ G P+ T+SSL+ ++ M L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I ++ A + + A+ + + G D T I + K
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRM----DDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F+K + KP TY L+ D VK +EM G P
Sbjct: 312 AK----------EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++TIL+DA +GN A L +MR+ G+ P++ Y T I +R RL A LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ ++P TYI + YG + L ++ M G N
Sbjct: 422 GNMESLGVKPTAYTYIVFI---DYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P+ TY+ LM D V L+ EM T+GL PN ++TI I G +G + A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ILK M ++G PDVV YT I +++L A +FE+MK + +P+ VTYITLL
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S L V+Q + +M K G+ + L++ C+
Sbjct: 338 FSDNRDLDSVKQ---FWSEMEKDGHVPDVVTFTILVDALCK 375
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 197/499 (39%), Gaps = 82/499 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 287 VTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +M + ++ +++ M + G D+ N L+ A A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ +K ++ LK V TY+T++ Q A+++ E M+ G PNTIT+++L
Sbjct: 559 KMFMRMKEMK----LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 405 INA-CANA----------------------------------GLVEQAMHLFEEMLQAGC 429
+ C N G V++AM F +M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------------------------------ 459
P+ LL V+A + A+++ ++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S+ VA G DG++ + + + K + + + + F K +P TYN
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSG----ARTLFEKFTKDLGVQPKLPTYN 789
Query: 520 ILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ D + + + ++++ G P+ ++ L+DA G SG ++ ++ K M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + + I V++ + A L+ + M P TY L+ S+ G L+E
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 637 VQQCLAVYQDMWKAGYKAN 655
+Q +++ M G + N
Sbjct: 910 AKQ---LFEGMLDYGCRPN 925
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK----ESGLNP 994
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + +++L+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N +H L+ L ++ M+ G+ D+ +YN L+ +AG A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1052 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 404 LIN 406
L N
Sbjct: 1108 LPN 1110
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 52/430 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 103 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 221
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 342 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ RL A + +M PN+VTY ++ R G E ++ L + M + G
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG---ESEKALKLLSLMEEKGCSP 517
Query: 655 NDTYLKELIE 664
N LI+
Sbjct: 518 NVVTYTALID 527
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 160/397 (40%), Gaps = 69/397 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 255 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 314
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 467
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 468 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 504
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ L +A L EMK L Y ++ S+
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK 601
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 156/390 (40%), Gaps = 59/390 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 367 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 424
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 425 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 480
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 481 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 540
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 541 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 579
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
T P ++ Y ++ + ++ EM
Sbjct: 580 --------MKQTYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 613
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++AF L+ EM P L ++ L++
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKG 703
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 115/336 (34%), Gaps = 100/336 (29%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+D FT W AL + +ED +T+ + +I+ A ++AM
Sbjct: 8 MDRFTVGCFAHALCKEGRWADALDMIEREDF-----KLDTVLCTHMISGLMEASYFDEAM 62
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
M C PN +R S L K Q+ G R
Sbjct: 63 SFLHRMRCNSCIPNVV-----------------TYRTLLSGFLKKKQL-------GWCKR 98
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
I NM +T N P + +N L+ + C DY L+
Sbjct: 99 IINM------MMTEGCN-----------------PNPSLFNSLVHSYCNEKDYAYAYKLL 135
Query: 537 NEMRTVGLSPNHISWTILIDA-CG------------------------------------ 559
N M T G P ++ + I I + CG
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195
Query: 560 ----GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G G + A Q++K M G PD Y+ I + ++++AF LF+EMK +
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++ TY L+ + + G + + Q ++++M G
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQW---LFEEMRSVG 288
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 585
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 586 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 639
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 640 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 170/402 (42%), Gaps = 55/402 (13%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+Y + AI+E++ + N + FN L+ A + + ++ M++ D+ ++
Sbjct: 134 NYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFL 193
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C AG A E++ E + A G + D ++ +V+ AK + A +V
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHE---MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G P+ I ++++I+ A AG ++A+ + + ML C P IL+ + +A
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK 507
+RA LFR S F PNS Y+S
Sbjct: 311 LERAEELFRVMAAS--------------------------------GFRPNSVIYTSLIH 338
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+ + MK C+ L +EM G P+ I+ T++ID SGN E A
Sbjct: 339 GFA-------KSGRMKEACS-------LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + M G P+VV YTT I+ + R+ AF + + M + P+ VTYI LL
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G L E Q L ++ K N L+ C+G
Sbjct: 445 FCKLGRLDEAAQLL---DELDKCSSSPNLQLYSSLVNGLCDG 483
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 221/536 (41%), Gaps = 72/536 (13%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F + R A+ ++ K+ P+++ ++D G K+ ++ ++ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 287 VTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ M + A +K EV+ M+K G D +YN ++ AG+ A
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH---A 276
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
QE + ++ AK + +V TY +V A + A ++ M ++G PN++ ++S
Sbjct: 277 QEALKVLDNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---- 459
LI+ A +G +++A LF+EM++AG P+ +++ ++ F++A + F
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 460 ----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
++ T + G G R++N K I + P+S
Sbjct: 396 CKPNVVTYTTIIQGLSKIG---RVANAFRIMKGMIAH--GCFPDSVTYICLLDGFCKLGR 450
Query: 505 FDK---------RFSFKPTTTTYNILMKACCTDYYRVKALMNEM------RTVGLSPNHI 549
D+ + S P Y+ L+ C D V+ ++++ L P +
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLC-DGGSVEKTLDDLFEQSKAAAETLDPG-L 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQAFSLFE 607
+I++ C +G ++ A +I + M +G PD Y I RS+ R+++AF+L
Sbjct: 509 CCSIIVGLCK-TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ P+ VTY L + G EV + + + ++ G+ A+ L C
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIG---EVDRAVKMLEEASSRGWNADVVAYTAL----C 620
Query: 668 EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVE 723
G LC + R SL E V AA I + GL KV+
Sbjct: 621 TG-------------LCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI-INGLIKVK 662
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 114/569 (20%), Positives = 220/569 (38%), Gaps = 83/569 (14%)
Query: 215 CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
C P I + + K AL+ D P +++ G +
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ ++ + + N ++ SL++ + +K ++ M + G D+ ++ +++
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +GN A + + E+ +G K +V TY+TI++ + A ++ + M++
Sbjct: 374 GLCKSGNFEQAAKSFEEM----MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ------------------ 434
G P+++T+ L++ G +++A L +E+ + PN Q
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT 489
Query: 435 -------------------CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
CC+I++ C + + D A R+F + V+ G D
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLC-KTGRLDEACRIF------QRMVSEGCKPDAT 542
Query: 476 TDRI-SNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT--DYYR 531
T I N + ++ N V + D ++ + P TY L C + R
Sbjct: 543 TYNILINGLCRSRE------NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ E + G + + +++T L G V+ A+ + + M G +PD AY I
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ K+L+ A F+EM +P + TY L++A G++ E ++ M G
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA---FHRFESMLARG 713
Query: 652 YKANDTYLKE-LIEEWCEGVIQDKNQ-------NQGEVT-----------LCRRTNSQRP 692
+ + LI +C+ + D ++G V L R +++
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 693 QSLLLEKVAVHLQKSAAENLAIDLRGLTK 721
Q LL E A AA AI L GL K
Sbjct: 774 QELLQEMAAGGSPPHAATFTAI-LDGLRK 801
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 185/404 (45%), Gaps = 27/404 (6%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + GD K ++E + + ++ + L+N+ A K + LEV K M
Sbjct: 453 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 512
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ ++ K +K DV Y+ I+ F
Sbjct: 513 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL----IKDGIKPDVVLYNNIITAFCG 568
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ ++M P T T+ +I+ A G +++A+ +F+ M +GC P
Sbjct: 569 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 628
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + ++A ++ TL+ N + + H S+ +T
Sbjct: 629 YNALILGLVEKRKMEKAEQILDEMTLAGVSP--------NEHTYTTIMH-GYASLGDT-- 677
Query: 496 FVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
++ F K + TY L+KACC AL EM + N +
Sbjct: 678 ---GKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIY 734
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILID G++ A +++ M+ +G+ PD+ YT+ I C ++ +++A EEMK
Sbjct: 735 NILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 794
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL+ +R SL E + L+ +++M +G K +
Sbjct: 795 VGVKPNVKTYTTLINGWAR-ASLPE--KALSCFEEMKLSGLKPD 835
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 199/504 (39%), Gaps = 108/504 (21%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R++ + + +V+ +L++ A D++ L + M++ G+ + +Y
Sbjct: 325 GDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 384
Query: 328 NILLKACCLAGNTVLAQE---------------IYGE-----------------VKHLEA 355
+IL+ GN A IYG V+ +E
Sbjct: 385 SILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEE 444
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + L V E G+ P+ IT+ LIN A G V
Sbjct: 445 EGIDAPIDI--YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKV 502
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + +EM AG + N + ++L+ ++ + AF +F K V L +
Sbjct: 503 SKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNI 562
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
G DR + M+ + + T T F+P H F ++ K
Sbjct: 563 ITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT--FMPIIH--GFARKGEMKKALDVFDMMR 618
Query: 513 -----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
PT TYN L+ KA +++EM G+SPN ++T ++ G+
Sbjct: 619 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 678
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS--------------------- 604
A +R++G+ DV Y +K C +S R++ A +
Sbjct: 679 KAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILI 738
Query: 605 --------------LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L ++MK +QP++ TY + + A S+ G + Q+ ++M
Sbjct: 739 DGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDM---QRATKTIEEMKSV 795
Query: 651 GYKANDTYLKELIEEWCEGVIQDK 674
G K N LI W + +K
Sbjct: 796 GVKPNVKTYTTLINGWARASLPEK 819
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A + D SPN + TI+ GD K+ + LR + + L++Y
Sbjct: 638 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVY 697
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 698 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADL---M 754
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ +GV + D+ TY++ + + A Q A K E+M S GV PN T+++LIN A
Sbjct: 755 QQMKREGV-QPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 813
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A L E+A+ FEEM +G +P+ + L+ +
Sbjct: 814 ASLPEKALSCFEEMKLSGLKPDRAVYHCLMTS 845
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F +K ++ AL +D + P ++ +I K+ I +++
Sbjct: 594 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 653
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+ N + + ++M+ A D + ++ G+ D+ +Y LLKACC +G
Sbjct: 654 LAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRM- 712
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 713 --QSALAVTKEMSAQNIPR-NTFIYNILIDGWARRGDIWEAA-DLMQQMKREGVQPDIHT 768
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S INAC+ AG +++A EEM G +PN + L+ A ++A F
Sbjct: 769 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 828
Query: 461 LS 462
LS
Sbjct: 829 LS 830
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F + A+ +K P II G+ K+ +++
Sbjct: 557 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 616
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V ++ ++ M GV + +Y ++ G+
Sbjct: 617 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGD 676
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + L +G L+LDV+TY ++K + Q AL V ++M + + NT
Sbjct: 677 TGKA---FTYFTKLRDEG-LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 732
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G + +A L ++M + G +P+ + AC +A RA +
Sbjct: 733 IYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 787
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 112/284 (39%), Gaps = 37/284 (13%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++N G + +A FE+M G EP+S L+ A + A
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368
Query: 456 FRSWTLSKTQVAL--------GEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSF 505
R +++L G GN + + E K+K S N
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLN------------- 415
Query: 506 DKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
Y ++ A C + + +AL+ EM G+ + ++D G+
Sbjct: 416 ---------AIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGD 466
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L + + +E G++P V+ Y I + + ++ +A + +EM+H I+ N+ TY
Sbjct: 467 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 526
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ + L + A+++D+ K G K + +I +C
Sbjct: 527 LING---FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFC 567
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+PR ++ + + ++ D+ A K+ P+++ + I+ C GD ++
Sbjct: 727 IPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT 786
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
E+++S V N+ + +L+N A + L ++ M+ G+ D A Y+ L+
Sbjct: 787 KTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 174/377 (46%), Gaps = 34/377 (9%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V N+Y +N L+ L+ + V +M+ G + +YN L+ A C AG
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ + V + +G K ++ T++++V A + A KV ++M+ G+ P+ ++++
Sbjct: 64 AERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSW 459
+L++ G + +++ +F EM Q G P+ L+ A +A ++A L R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTY 518
L +V DG + F+ ++ + + ++ +P+ Y
Sbjct: 181 GLRMNEVTFTALIDGFCKK----------------GFLDDALLAVEEMRKCGIQPSVVCY 224
Query: 519 NILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
N L+ C D R L+ EM + P+ ++++ +I GN++ A Q+ + M
Sbjct: 225 NALINGYCKLGRMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD + Y++ I+ KRL A LFE M +QP+ TY TL+ + G+
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN- 341
Query: 635 HEVQQCLAVYQDMWKAG 651
V++ L+++ +M + G
Sbjct: 342 --VEKALSLHDEMIRKG 356
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 183/445 (41%), Gaps = 55/445 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 157
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R ++ + + G GN D
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 278 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---------------ITLLRARSRYGSLHEVQQCLAVY 644
K+A L ++ H P+ + Y + LL+ G + E + VY
Sbjct: 378 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK---VY 434
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
Q M +K + + LI C G
Sbjct: 435 QSMLDRNWKLDGSVYSILIHGHCRG 459
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 26/287 (9%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ GV PN T++ L+ A G +E+A+ + +M AGC PN+ N L+ A A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 449 FDRAFR---LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
D A R L R +K + + ME K F
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK----------------VF 104
Query: 506 DK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D+ R P +YN L+ C + A+ +EM GL P+ +++T LI A +
Sbjct: 105 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 164
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN+E A+ ++ MRE G+ + V +T I + L A EEM+ IQP++V Y
Sbjct: 165 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ + G + ++ + ++M K + +I +C+
Sbjct: 225 NALINGYCKLGRMDLARE---LIREMEAKRVKPDVVTYSTIISGYCK 268
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 264
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 324
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 325 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 365
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485
Query: 588 TAIK 591
+ ++
Sbjct: 486 SLVR 489
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 42/205 (20%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R P TYNIL++A C +A+ + +MR G +PN +++ L+ A +G ++
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62
Query: 566 GALQILKIMREDG------------------------------------MSPDVVAYTTA 589
GA +++ +MRE+G ++PDVV+Y T
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + L ++ ++F EM + P++VT+ +L+ A + G+L +Q +A+ M +
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL---EQAVALVAQMRE 179
Query: 650 AGYKANDTYLKELIEEWC-EGVIQD 673
G + N+ LI+ +C +G + D
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDD 204
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++R + ++ +N+L+N + E+ + M+ V D+ +Y+ ++ C
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 269
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ + + KGVL D TYS++++ + K A ++ E+ML GV P+
Sbjct: 270 GNLDSAFQLN---QKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 325
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-F 456
T+++LI+ G VE+A+ L +EM++ G P+ ++L+ ++ + A RL F
Sbjct: 326 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 385
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------S 510
+ + + V YD S E K ++ F DK + +
Sbjct: 386 KLY--HEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDRN 441
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT---------------- 552
+K + Y+IL+ C KAL +M G SPN S
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501
Query: 553 -------------------ILIDACGGSGNVEGALQILKIMREDGMSP 581
LID GNV+ + +L M DG+ P
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 269 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 317
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 318 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 375
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 376 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 435
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 436 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 492 FEEGMVVEADNAIQDLL 508
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 196/472 (41%), Gaps = 93/472 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 391 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 494
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 495 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G K +
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSGCKPD 688
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 637
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 638 AFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 688 DRKARSMLRSA 698
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 219 RADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D F N V + FGK L A+ +D P+ T+ID G ++ +
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE- 499
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+++ M++ G + +YNI++
Sbjct: 500 --------------------------------EMFEAMERRGCLPCATTYNIMI------ 521
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + ++K L +++G+L +V T++T+V V+ + + A++ E+M S G
Sbjct: 522 -NSYGDQERWDDMKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P++ +++LINA A GL EQA++ F M G +P+ N L+ A E + AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 286 SKALQLLGMAQ 296
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 94/453 (20%)
Query: 227 FVREFGKKRDLVSALRAYDAS--KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+RE G + + A+R +D + ++ + + +I G G ++ ++E S
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ F++L++ F ++V+++M+ G+ ++ +YN ++ AC G
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGG---- 271
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +V++F E+ML GV P+ IT++
Sbjct: 272 ---------------------VEFKRVVEIF-------------EEMLRNGVQPDRITYN 297
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SL+ C+ GL E A +LF EM+ G + + N LL A + Q D A+ +
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM------ 351
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+E K+ + P TY+ +
Sbjct: 352 -------------------LEMPGKKIL----------------------PNVVTYSTMA 370
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A L NEM+ +G+ + +S+ L+ G E AL++ K M G+
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DVV Y + + + + +F+EMK ++ PNL+TY TL+ S+ GSL+E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK-GSLYE--EA 487
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
+ V+++ +AG KA+ ELI C+ + D
Sbjct: 488 MEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 196/451 (43%), Gaps = 49/451 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +GK A++ +++ K PN+ +ID CG G ++ + I+E++
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + +NSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI E + K +L +V TYST+ +A A + AL + +M G+ + ++
Sbjct: 345 DLAYEIMLE---MPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ A G E A+ + +EM +G + + N LL + +F+ R+F+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE-- 458
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +V + + ++ K S+ V + F K+ K Y+
Sbjct: 459 MKKDRV-----FPNLLTYSTLIDVYSKGSLYEEAMEV----FREF-KQAGLKADVVLYSE 508
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
L+ A C + A L++EM G+ PN +++ +IDA G S E + + E
Sbjct: 509 LINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQ 568
Query: 577 ---------DGMSPDVVAY-----------------TTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ + + A K + + ++ S+F++M
Sbjct: 569 SESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMH 628
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+PN+VT+ +L A SR S+ + L
Sbjct: 629 ELEIKPNVVTFSAILNACSRCKSIEDASMLL 659
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 192/440 (43%), Gaps = 50/440 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKK------RDLVSAL----------RAYDASKKH 250
NL I AC V R V+++G K L+SAL Y K
Sbjct: 142 TNLEIHSACEVFRR-------VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194
Query: 251 LSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN-----AH 303
PN+ I+ G+C G K+ + ED+++ + NI +N+L++ + A
Sbjct: 195 RIQPNLTTFNIFIN--GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAG 252
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ + K M + + ++N L+ C N + A+ + E++ + LK ++
Sbjct: 253 KMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ----RQGLKPNI 308
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY++++ ++ A+ + + M+ G+ PN +T+++LIN ++++A LF++
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+ + PN+ N ++ A +A + F L S L E N + +
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS--------MLDEGIFPNVSTYNCL- 419
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+ N + + + K TYNIL+ C D KA L+ EM
Sbjct: 420 ---IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLN 476
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
VG+ PNH+++ L+D GN++ AL++ M ++G +VV Y IK ++ +L+
Sbjct: 477 VGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLED 536
Query: 602 AFSLFEEMKHYQIQPNLVTY 621
A L EM + PN TY
Sbjct: 537 ANRLLNEMLEKGLNPNRTTY 556
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 172/404 (42%), Gaps = 56/404 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N+ FN +N A L +V ++++ G ++ +YN L+ C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ +K + A + ++ T++T++ F + A E+M G+
Sbjct: 247 KKGSAGKMYRADAILKEMLANKICPNEI-TFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++SLIN +N G +++A+ L+++M+ G +PN N L+ + A +L
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F D I+ + VPN+
Sbjct: 366 F--------------------DDIAEQD------------LVPNA--------------- 378
Query: 516 TTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N ++ A C + AL N M G+ PN ++ LI + NV A ++L
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M + DVV Y I + +A L EM + ++PN VTY TL+ G+
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
L + L V M K G +AN LI+ +C+ G ++D N+
Sbjct: 499 L---KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANR 539
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 55/295 (18%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V ++M+ + PN T++ IN AG + +A + E++ G PN N L+
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG-- 244
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ A +++R+ + K +A ++I
Sbjct: 245 -HCKKGSAGKMYRADAILKEMLA---------NKIC------------------------ 270
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T+N L+ C D K EM+ GL PN +++ LI+ +G
Sbjct: 271 --------PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ + M G+ P++V + I + K +K+A LF+++ + PN +T+
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
T++ A + G + E A++ M G N + LI C +NQN
Sbjct: 383 TMIDAFCKAGMMEE---GFALHNSMLDEGIFPNVSTYNCLIAGLC------RNQN 428
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 196/472 (41%), Gaps = 93/472 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 242 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 301
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 302 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 361
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 362 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 417
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 418 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 465
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 466 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 490
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 491 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 550
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 551 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 610
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G K +
Sbjct: 611 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSGCKPD 659
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 378 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 437
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 438 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 493
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 494 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 553
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 554 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 608
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 609 AFAVL----------QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 658
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 659 DRKARSMLRSA 669
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 219 RADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D F N V + FGK L A+ +D P+ T+ID G ++ +
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE- 470
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+++ M++ G + +YNI++
Sbjct: 471 --------------------------------EMFEAMERRGCLPCATTYNIMI------ 492
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + ++K L +++G+L +V T++T+V V+ + + A++ E+M S G
Sbjct: 493 -NSYGDQERWDDMKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 550
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P++ +++LINA A GL EQA++ F M G +P+ N L+ A E + AF
Sbjct: 551 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 610
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 141 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 196
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 197 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 256
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 257 SKALQLLGMAQ 267
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 201/438 (45%), Gaps = 33/438 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + A Y ++ + N+ +N+L+ ++ KFT + V
Sbjct: 358 PDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAV 417
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 418 FDDLRSAGYVPDVVTWNTLL---SVFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLIS 473
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + A+++ + M+ AG+ P+ T++++++A A G EQA LF EM+ C+P
Sbjct: 474 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKP 533
Query: 432 NSQCCNILLQACVEACQFDR---------AFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ + LL A A + D+ A R+ R L KT V + + +
Sbjct: 534 DELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAF 593
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMK--AC 525
+ ++ + N + N+ S + K S + TYN LM +
Sbjct: 594 QELRRRRCSLDINVL-NAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSR 652
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D + ++++ E+++ G+ P+ S+ +I A G G ++ A ++ M+ G+ PD+V
Sbjct: 653 LGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVT 712
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y IK V + ++A L + +PN T+ ++L+ SR+G + E + L+
Sbjct: 713 YNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLP 772
Query: 646 DMWKAGYKANDTYLKELI 663
++ K L EL+
Sbjct: 773 KIYPGISKQEKQRLSELL 790
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 186/418 (44%), Gaps = 28/418 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTL 309
+P+ ++ G + + A+++ + V + +N + + + K +
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M++ G+ D +YN L+ C G A +++ E+K A G + D T++++
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMK---AAG-FEPDKVTFNSL 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V+ A+ + A+ V + M +AG TP+ +T++SLI+A GL+E+A+ L +EM G
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ + D A + + L Y+ ++ + K +
Sbjct: 357 KPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLC-TYNALI-KLHGVRGKFTEM 414
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLS 545
+ + FD + + P T+N L+ + V + EM+ G
Sbjct: 415 M------------AVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYI 462
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P ++ LI + G + A++I K M E G+ PD+ Y + R R +QA L
Sbjct: 463 PERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKL 522
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
F EM +P+ ++Y +LL A Y + ++ + + +D++ + ++ +K L+
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHA---YANAKKLDKMKTLSEDIYAERIERHNWLVKTLV 577
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 57/291 (19%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T ++VFA A L +L A P+ +++L++A + AG A+ +F+ M+
Sbjct: 158 TAIRVFARAG----CLAEASAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDG 213
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +P N++ F ++ W K VAL + +M+
Sbjct: 214 GVQPALVTYNVV---------FHAYSKMSVPW---KEVVAL----------VDSMKE--- 248
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGL 544
+ + Y TYN L+ +CC + + +EM+ G
Sbjct: 249 -------DGIERDRY--------------TYNTLI-SCCRRRGLHREAAQVFDEMKAAGF 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++ L+D G + E A+ +LK M G +P VV Y + I V+ L++A
Sbjct: 287 EPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L +EM+ ++P++VTY TL+ R G ++ LA Y +M + G N
Sbjct: 347 LKQEMEFRGMKPDVVTYTTLISGLDRVG---KIDAALATYSEMVRNGCSPN 394
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 94/453 (20%)
Query: 227 FVREFGKKRDLVSALRAYDAS--KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+RE G + + A+R +D + ++ + + +I G G ++ ++E S
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ F++L++ F ++V+++M+ G+ ++ +YN ++ AC G
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGG---- 271
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +V++F E+ML GV P+ IT++
Sbjct: 272 ---------------------VEFKRVVEIF-------------EEMLRNGVQPDRITYN 297
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SL+ C+ GL E A +LF EM+ G + + N LL A + Q D A+ +
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM------ 351
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+E K+ + P TY+ +
Sbjct: 352 -------------------LEMPGKKIL----------------------PNVVTYSTMA 370
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A L NEM+ +G+ + +S+ L+ G E AL++ K M G+
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DVV Y + + + + +F+EMK ++ PNL+TY TL+ S+ GSL+E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK-GSLYE--EA 487
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
+ V+++ +AG KA+ ELI C+ + D
Sbjct: 488 MEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 185/457 (40%), Gaps = 78/457 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +GK A++ +++ K PN+ +ID CG G ++ + I+E++
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + +NSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 341 VLAQEI-----------------------------------YGEVKHLEAKGVLKLDVFT 365
LA EI Y E+K L + LD +
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG----IGLDRVS 400
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ ++A ++ ALKV ++M S+GV + +T+++L++ G + +F+EM
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY------DGNTD 477
+ PN + L+ + ++ A +FR + + K V L + +G D
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Query: 478 R-ISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
+ ++ K+ I PN V NS +F + +TT L+ R
Sbjct: 521 SAVLLLDEMTKEGI--RPNVVTYNSIIDAFGR-------STTAEFLVDGVGASNERQSES 571
Query: 536 MNEMRTVGLSPNHISW----------TILIDACG-------GSGNVEGALQILKIMREDG 578
M G+ + I+W ++ + G G + L + K M E
Sbjct: 572 PTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELE 631
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ P+VV ++ + C R K ++ A L EE++ + Q
Sbjct: 632 IKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQ 668
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 173/409 (42%), Gaps = 33/409 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G + + ++L V LN +NSL++ + + K M+ GV
Sbjct: 155 VDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGV 214
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ AG+ + +Y E+K G DV+ YS ++ + +
Sbjct: 215 EPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAG----DVYFYSAVINAYCRGGNVR 270
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + GV PN T+ +LIN G +E A L +M G N N ++
Sbjct: 271 RASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMI 330
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQ-SITNTP 494
++A + + K + L + Y NT R++ ME K I
Sbjct: 331 DGYCRHGMVEKALEI--KAVMEKMGIEL-DIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
PN Y S+ TT +I K D + L +M G P+ +++ ++
Sbjct: 388 GVAPN--YVSY---------TTLISIHAKE--GDMVEARRLFRDMEGKGSRPSVVTYNVM 434
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G++ A + K M + G+ PD+ Y + + ++ A LFEEMKH
Sbjct: 435 IDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGT 494
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+PN+V Y L+ ++ G E Q +Y DM AG +DT L+
Sbjct: 495 KPNVVAYTALVSGLAKEGRSEEAFQ---LYDDMLAAGLTPDDTLYSVLV 540
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 142/372 (38%), Gaps = 82/372 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D GD K A+Y++++ +NV ++Y +++++N +++ EV
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ GV + +Y L+ C G A+ + ++
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335
Query: 351 -----KHLEAKGVL-----KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K LE K V+ +LD++TY+T+ + A K+ M GV PN ++
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LI+ A G + +A LF +M G P+ N+++ ++ A R +
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK--- 452
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
ME K VP+ + TY
Sbjct: 453 --------------------EMEKK---------GLVPDIY---------------TYAG 468
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C + A L EM+ G PN +++T L+ G E A Q+ M G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 579 MSPDVVAYTTAI 590
++PD Y+ +
Sbjct: 529 LTPDDTLYSVLV 540
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN T+I + GD +++R ++ D+ + ++ +N +++ + ++
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K M+K G++ D+ +Y L+ C+ G +A ++ E+KH +G K +V Y+ +V
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKH---RGT-KPNVVAYTALV 505
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML+AG+TP+ +S L+ +
Sbjct: 506 SGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S ++++D SG+V+ A +L + G+ + Y + + R + L +E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M++ ++P + TY L+ SR G + +V+ AVY +M + + + +I +C
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVE---AVYDEMKRKNVAGDVYFYSAVINAYCR 265
Query: 669 G 669
G
Sbjct: 266 G 266
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 211/511 (41%), Gaps = 86/511 (16%)
Query: 210 AIRYACIVPRADILFCNF-------------VREFGKKRDLVSALRAYDAS--KKHLSSP 254
AIR+A D + NF +RE G + + A+R ++ + ++ +
Sbjct: 124 AIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNE 183
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
+ +I + G G ++ ++E ++ +Y F++L++ ++V+
Sbjct: 184 QGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVF 243
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M+ G+ ++ +YN ++ AC KG + +
Sbjct: 244 ETMKSSGLKPNLVTYNAVIDAC--------------------GKGGVDFN---------- 273
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A ++ ++ML GV P+ IT++SL+ C GL E A +LF EML G E +
Sbjct: 274 --------RAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
N LL A + Q D AF++ ++ + V G G D N+ +
Sbjct: 326 IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385
Query: 485 KDKQSITNTPNFVPNSHYSSFDK--RF-------------SFKPTTTTYNILMKACCTD- 528
+ K + N+ S + K RF K TYN L+
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y VK + EM+ + PN ++++ LID G + A+++ + ++ G+ DVV Y+
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ ++ A S +EM I+PN+VTY +++ A R GS +C V
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGS----AEC--VIDPP 559
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
++ + +++E+ E + DK NQ
Sbjct: 560 YETNVSKMSSSSLKVVEDATESEVGDKEDNQ 590
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 193/460 (41%), Gaps = 66/460 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A++ ++ K PN+ +ID CG G D+ ++ I++++
Sbjct: 223 FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + FNSL+ V + ++ M G+ D+ +YN LL A C G
Sbjct: 283 LRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQM 342
Query: 341 VLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +I E+ KH+ +V TYST++ +A A AL + +M A + +
Sbjct: 343 DLAFQIMSEMPRKHIMP------NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 396
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++L++ A G E+A+++ +EM +G + ++ N LL + +++ R+F
Sbjct: 397 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456
Query: 459 WTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ T L + Y ME + F K+ K
Sbjct: 457 MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV-----------------FREF-KKAGLK 498
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ A C + A+ ++EM G+ PN +++ +IDA G SG+ E +
Sbjct: 499 ADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDP 558
Query: 571 -------------LKIM----------REDGMSPDVVAYTTAIKVCVRSK--RLKQA--- 602
LK++ +ED + A K C K R +Q
Sbjct: 559 PYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILC 618
Query: 603 -FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++F +M I+PN+VT+ +L A SR S + L
Sbjct: 619 ILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLL 658
>gi|255586885|ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525928|gb|EEF28334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1129
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 59/362 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ ++ID C G K+ Y LRS+NV + VFN+L+ A D F +
Sbjct: 574 PNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDV 633
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + L+KAC AG A+E+Y + KG ++ Y+
Sbjct: 634 LAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEV----YTIA 689
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + W+ A V +DM GV P+ + S+L++ +AGLV+ A +E G
Sbjct: 690 VNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGT 749
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + +A L+ ED
Sbjct: 750 QLGIVPYSSLMGACSNAKNWQKALELY-------------EDI----------------- 779
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
K KPT +T N LM A C KAL ++EM++ GL PN
Sbjct: 780 -----------------KAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPN 822
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++IL+ A +++ +L +ED ++P + Y I +C+R R K+A SL E
Sbjct: 823 IVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLR--RYKKACSLGE 880
Query: 608 EM 609
+
Sbjct: 881 SI 882
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 146/326 (44%), Gaps = 42/326 (12%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A E+ L LK D Y+T++ A +
Sbjct: 499 KLVPNPSLSTFNMLMSVCSSSQDSDGAFEVL----RLAQGAGLKADCKLYTTLISTCAKS 554
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++AGV PN T+ SLI+ CA AG + +A + + +P+
Sbjct: 555 GKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVF 614
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDR---ISNME 483
N L+ AC ++ DRAF + + + + +G G DR + NM
Sbjct: 615 NALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNML 674
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
HK ++ K T Y I + C D+ +++ ++M
Sbjct: 675 HK-----------------------YNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTR 711
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++P+ + + L+D G +G V+ A + L+ R G +V Y++ + C +K ++
Sbjct: 712 KGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQK 771
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
A L+E++K +++P + T L+ A
Sbjct: 772 ALELYEDIKAIKLKPTVSTMNALMTA 797
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 45/382 (11%)
Query: 276 RAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+A+ E R + N + FN LM+V ++ D EV + Q G+ AD Y L+
Sbjct: 489 KAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLI 548
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G E++ E+ ++ +V TY +++ A A A + S
Sbjct: 549 STCAKSGKVDAMFEVFHEM----VNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRS 604
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-----PNSQCCNILLQACVEA 446
V P+ + +++LI AC +G V++A + EM G E P+ L++AC +A
Sbjct: 605 KNVKPDRVVFNALITACGQSGAVDRAFDVLAEM---GAETHPIDPDHITVGALMKACAKA 661
Query: 447 CQFDRAFRLF------------RSWTLSKTQVALGEDYDGNTDRISNMEHK----DKQSI 490
Q DRA ++ +T++ + D++ +M K D+ +
Sbjct: 662 GQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFL 721
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTT---------YNILMKACCT--DYYRVKALMNEM 539
+ + H D F T Y+ LM AC ++ + L ++
Sbjct: 722 SALVDVA--GHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDI 779
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + L P + L+ A ++ AL+ L M+ G+ P++V Y+ + R L
Sbjct: 780 KAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDL 839
Query: 600 KQAFSLFEEMKHYQIQPNLVTY 621
L + K I P + Y
Sbjct: 840 DAGDMLLSQAKEDCITPTFLMY 861
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 242 RAYD-----ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y L N+ V+
Sbjct: 629 RAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTI 688
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N D +F VY +M + GV D + L+ AG +A E E +
Sbjct: 689 AVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEAR--- 745
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G +L + YS+++ ++AK WQ AL++ ED+ + + P T ++L+ A + +
Sbjct: 746 TQGT-QLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQL 804
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ EM G PN +ILL A
Sbjct: 805 QKALETLSEMKSFGLCPNIVTYSILLVA 832
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ R L PN ++ +L+ C S + +GA ++L++ + G+ D YTT I
Sbjct: 489 KAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLI 548
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
C +S ++ F +F EM + ++PN+ TY +L+ ++ G +
Sbjct: 549 STCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQM 592
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +T+N+LM C + D ++ + GL + +T LI C SG V+ ++
Sbjct: 504 PSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEV 563
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y + I C ++ ++ +AF + ++ ++P+ V + L+ A +
Sbjct: 564 FHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQ 623
Query: 631 YGSLHEVQQCLA 642
G++ LA
Sbjct: 624 SGAVDRAFDVLA 635
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TY L+ C KA +R+ + P+ + + LI ACG SG V+ A
Sbjct: 573 EPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFD 632
Query: 570 ILKIMRED--GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+L M + + PD + +K C ++ ++ +A ++ + Y I+ Y +
Sbjct: 633 VLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNF 692
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
S+ G + + +VY DM + G ++ +L L++
Sbjct: 693 CSQTG---DWEFARSVYDDMTRKGVAPDEMFLSALVD 726
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 198/466 (42%), Gaps = 57/466 (12%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
EF K ++S + +K P++ +ID GD + A+ + + ++ +
Sbjct: 172 EFDKADTVISEM------EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKP 225
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I FNS++ +F EV++ M + V D+ S+NIL+ C G A + Y
Sbjct: 226 GIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFY 285
Query: 348 GEVKHL------------------------------EAKGV-LKLDVFTYSTIVKVFADA 376
E++ E KG+ L D Y+ ++ F A
Sbjct: 286 KEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
AL+V+++M+ G P+ +T+++L+N + A L EM + G P+
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ F++A +LF + + L D I M K + N
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQR----LRPDVVAYNSLIDGMCRKGDLAKAN---- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ R F P TY+IL+ + C +A ++EM + G PN +++ +
Sbjct: 458 ---ELWDDMHAREIF-PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I SGNV+ Q L+ M +D + PD++ + T I ++ + + AF++F M+ +
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TYL 659
QP+ VTY ++ S G++ E + V++ M +G + + TY+
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGR---VFKKMGASGIEPDRYTYM 616
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 169/396 (42%), Gaps = 29/396 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCL 336
Y + S + +N Y N +++ L+F V M+K V D+ ++N+L+ A
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + KG LK + T+++++K + + A +V M V P
Sbjct: 205 AGDVDAAIAL---VDSMANKG-LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +++ LI G VE+AM ++EM Q G P+ + L+ + D A
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320
Query: 457 RSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R V G Y G R +M +++ V P
Sbjct: 321 REMK-GLGLVPDGVIYTMVIGGFCRAGSM----SEALRVRDEMVG----------LGCLP 365
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEM+ G++P+ ++T LI GN E ALQ+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVVAY + I R L +A L+++M +I PN VTY L+ +
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G +V++ +M G N +I+ +C
Sbjct: 486 G---QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 179/429 (41%), Gaps = 34/429 (7%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E FR + C PDV +IL F R ++ A++ Y ++
Sbjct: 248 EVFRAMDQCSVAPDVR----------SFNILIGGFCR----VGEVEEAMKFYKEMQQRGV 293
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I + G + A +++ + + ++ ++ A + L
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M LG + D+ +YN LL C + A+E+ E+K +GV D+ T++T++
Sbjct: 354 VRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE---RGVTP-DLCTFTTLI 409
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL++ + +L + P+ + ++SLI+ G + +A L+++M
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN +IL+ + E Q + AF F +SK GN I K
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFG-FLDEMVSK----------GNLPNIMTYNSIIK-GY 517
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
+ N + + + P T+N L+ + + + N M + P+
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDA 577
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ++I+ GN+E A ++ K M G+ PD Y + I V + K+AF L +E
Sbjct: 578 VTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Query: 609 MKHYQIQPN 617
M H P+
Sbjct: 638 MMHRGFAPD 646
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 159/361 (44%), Gaps = 40/361 (11%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG LA+E Y V +++ ++ +T + +V + + + A V +M V P
Sbjct: 135 AGWPHLAEEAYRLVLSSDSE----VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFP 190
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T + LI+A AG V+ A+ L + M G +P N +L+ + +FD+A +F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250
Query: 457 RSWTLSKTQVALGEDYD------GNTDRISNME-----HKDKQSITNTPNFVPNS----- 500
R+ Q ++ D G R+ +E +K+ Q TP+ V S
Sbjct: 251 RAM----DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306
Query: 501 --------HYSSF---DKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
H +++ K P Y +++ C +AL +EM +G P+
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ L++ + A ++L M+E G++PD+ +TT I R ++A LF+
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ H +++P++V Y +L+ R G L + + ++ DM N LI+ C
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE---LWDDMHAREIFPNHVTYSILIDSHC 483
Query: 668 E 668
E
Sbjct: 484 E 484
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + + + + AL+ +D P++ ++ID G+C GD K+ +++D
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID--GMCRKGDLAKANELWDD 462
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ ++ + N ++ L +++H K +E M G + ++ +YN ++K C +
Sbjct: 463 MHAREIFPNHVTYSIL--IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 338 GNTVLAQE--------------------IYGEVKHLEAKGVLKL-----------DVFTY 366
GN Q+ I+G +K G + D TY
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ I+ F++ + A +V + M ++G+ P+ T+ SLIN AG ++A L +EM+
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Query: 427 AGCEPNSQ 434
G P+ +
Sbjct: 641 RGFAPDDK 648
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 177/425 (41%), Gaps = 58/425 (13%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------ 341
N +FNSL++ NA D + ++ M G YNI + + C +G +
Sbjct: 343 NPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC-SGEELPSPDLL 401
Query: 342 -LAQEIYGEV-----------------------KHLEAKGVLKL--------DVFTYSTI 369
LA+++Y E+ K +A ++KL D TYS +
Sbjct: 402 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKV 461
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + A + ++M S GV P+ T++ LI++ GL+EQA F+EM GC
Sbjct: 462 ITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGC 521
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ LL A ++ Q +A +F T++ + + G G + +
Sbjct: 522 SPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACE 581
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + T + V + Y + S P TY L+ C + V A L++ M
Sbjct: 582 VYAK----MIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G PNHI + LID G ++ A ++ M + G P V YT+ I + +RL
Sbjct: 638 SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A + +M PN+VTY ++ R G E Q+ L + M K G N
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIG---ECQKALKLLSMMEKRGCNPNVVTY 754
Query: 660 KELIE 664
LI+
Sbjct: 755 TSLID 759
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 191/438 (43%), Gaps = 61/438 (13%)
Query: 278 IYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+YE++ + + LN + N L + D F ++ K M + G + D ++Y+ ++
Sbjct: 407 VYEEMLASSCVLNKVNTANFARCLCGMGKFDKAF--QIIKLMMRKGFVPDTSTYSKVITF 464
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A A ++ E+K + GV+ DV+TY+ ++ F + A ++M S G
Sbjct: 465 LCEAMKVEKAFLLFQEMKSV---GVIP-DVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+P+ +T+++L++A V QA +F M+ AGC PN+ + L+ +A + +A
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Query: 454 RLFRSWTLSKTQVALGEDYDG-NTDRISN-------------MEHK--DKQSITNT---- 493
++ + V ++G +TD I+ HK D Q + +
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640
Query: 494 ---PN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYRVKA 534
PN + ++ F K + + PT TY L+ A D A
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +++M +PN +++T +ID G + AL++L +M + G +P+VV YT+ I
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDG 760
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+S ++ + LF +M PN VTY L+ G L E L+
Sbjct: 761 LGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLS---------- 810
Query: 653 KANDTYLKELIEEWCEGV 670
+ TY + ++ +C V
Sbjct: 811 EMKQTYWPKYVQGYCSVV 828
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 45/388 (11%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A + V K M +LG D + +A C G + +
Sbjct: 210 YNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGR-------WSDAL 262
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A + A+ M PN +T+ +L+
Sbjct: 263 VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKK 322
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + M+ GC PN N L+ + A + A++L +
Sbjct: 323 KQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVY 382
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF- 509
+ + GE+ + D ++ E ++ + NT NF FDK F
Sbjct: 383 NIFIGSICSGEELP-SPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C KA L EM++VG+ P+ ++TILID+
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G +E A M G SP VV YT + +++K++ QA +F M PN +
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ + G E Q+ VY M
Sbjct: 562 TYSALVDGLCKAG---ESQKACEVYAKM 586
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 167/394 (42%), Gaps = 60/394 (15%)
Query: 253 SPNMYICRTIIDVCGICGDY--MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ +ID G+C + + ++ + + + S N ++++L++ L
Sbjct: 608 APNVVTYGALID--GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNA 665
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV+ M K G + + +Y L+ A LA ++ ++ LE+ +V TY+
Sbjct: 666 QEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM--LESS--CTPNVVTYTA 721
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ Q ALK+ M G PN +T++SLI+ +G V+ ++ LF +M+ G
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN +L+ C A D A L +S M+
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSL-----------------------LSEMKQ---- 814
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
T P +V Y S + FS K + L+ E+ + G+
Sbjct: 815 --TYWPKYVQG--YCSVVQGFSKK----------------FIASLGLLEELESHGMVSIA 854
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSL 605
+ +LID+ +G +E AL++ K M E S ++ + YT+ I+ + +L++AF L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ E+ + P L +I L++ + +E Q
Sbjct: 915 YSEITRKGVVPELSAFICLIKGLIKVNKWNEALQ 948
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 180/436 (41%), Gaps = 42/436 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++R+ ++++ S + ++ + +L++ + + ++
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------GEVKHLEAKGV--L 359
+ M G + +Y+ L+ C AG + A E+Y G + E + +
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY ++ A A ++ + M S G PN I + +LI+ G ++ A
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F M + G P L+ A + + D A ++ S L + Y D +
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVL-SQMLESSCTPNVVTYTAMIDGL 726
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKAL 535
+ K S +KR P TY L+ K+ D L
Sbjct: 727 CRIGECQKAL----------KLLSMMEKR-GCNPNVVTYTSLIDGLGKSGKVDMSL--QL 773
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M T G +PN++++ +LI+ C +G ++ A +L M++ V Y + ++
Sbjct: 774 FTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQ--GF 831
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SK+ + L EE++ + + Y L+ + S+ G L ++ L ++++M + N
Sbjct: 832 SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL---EKALELHKEMMEVSSSLN 888
Query: 656 ----DTYLKELIEEWC 667
DTY LI+ C
Sbjct: 889 ITSKDTY-TSLIQALC 903
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K +V A D + PN I +ID G C G ++ ++ +
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALID--GFCKVGKLDNAQEVFFRMSKCGYLPT 680
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ + SL++ D L ++V M + ++ +Y ++ C G Q+
Sbjct: 681 VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE---CQKALK 737
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E +G +V TY++++ + M+L++ M++ G PN +T+ LIN C
Sbjct: 738 LLSMMEKRGC-NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796
Query: 409 ANAGLVEQAMHLFEEMLQ 426
AGL+++A L EM Q
Sbjct: 797 CAAGLLDEAHSLLSEMKQ 814
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 507 KRFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F ++P+ TYN L++ T +RV+ EM +G + + A
Sbjct: 199 KDFGYRPSGATYNALVQVLATAGQMDMGFRVQ---KEMSELGFCTDKFTVGCFAQALCKE 255
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G AL +++ RED D V T I + + +A S M+ PN+VTY
Sbjct: 256 GRWSDALVMIE--RED-FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTY 312
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TLL + + ++ C + M G N + L+ +C
Sbjct: 313 RTLL---AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYC 355
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 181/381 (47%), Gaps = 29/381 (7%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +NS++N + D L++ + M + V AD+ +Y+ ++ + C G A ++
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K + TY+++V A W +++ +DM S + PN IT++ LI+
Sbjct: 229 ---KEMETKGI-KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTLSKT 464
G +++A L++EM+ G PN+ N L+ C++ + + L S
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G ++ ++ K + KR T TY+IL++
Sbjct: 345 IVTFTSLIKGYC-KVKRVDEGMKL-------------FRKISKR-GLVANTVTYSILVQG 389
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + L EM ++G+ P+ +++ IL+D +G +E AL+I + +++ M+ D
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+V YT I+ + +++ A++LF + ++PN++TY ++ + GSL E L
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL- 508
Query: 643 VYQDMWKAGYKANDTYLKELI 663
+ M + G + ND LI
Sbjct: 509 --RKMEEDGNEPNDCTYNTLI 527
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 198/423 (46%), Gaps = 39/423 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 168 PNVVTYNSIVN--GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L+ C AG ++ +K + ++ ++ +V T++ +
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQL---LKDMTSRKIIP-NVITFNVL 281
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ VF Q A ++ ++M++ G++PNTIT++SL++ + +A ++ + M++ C
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ L++ + + D +LFR +SK + NT S +
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRK--ISKRGLV------ANTVTYSIL------- 386
Query: 490 ITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
F + ++ F P TY IL+ C + KAL +++
Sbjct: 387 ---VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
++ + + +TI+I+ G VE A + + G+ P+V+ YT I + L +
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 503
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L +M+ +PN TY TL+RA R G L + + ++M G+ A+ + +K
Sbjct: 504 ANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK---LIEEMKSCGFSADASSIKM 560
Query: 662 LIE 664
+I+
Sbjct: 561 VID 563
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 155/378 (41%), Gaps = 45/378 (11%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ K M+ G+ ++ + NI++ C T A + G+V L + D
Sbjct: 81 FNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTT 136
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T++T++ A+ + M+ G PN +T++S++N +G A+ L +M
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM 196
Query: 425 LQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+ + + + ++ + C + C D A LF+ ME
Sbjct: 197 DERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------ME 232
Query: 484 HKDKQSITNTPNFVP---------NSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRV 532
K +S T N + N S K P T+N+L+ +
Sbjct: 233 TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+A L EM T G+SPN I++ L+D + A +L +M + SPD+V +T+ I
Sbjct: 293 EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K + KR+ + LF ++ + N VTY L++ + G L ++ ++Q+M
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE---LFQEMVSL 409
Query: 651 GYKANDTYLKELIEEWCE 668
G + L++ C+
Sbjct: 410 GVLPDVMTYGILLDGLCD 427
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWTILIDA 557
YS K + ++P TTT+N L+ C + +A++ R V G PN +++ +++
Sbjct: 120 YSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNG 179
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ AL +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 180 ICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 239
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
LVTY +L+ + G ++ Q L +DM N LI+ + EG +Q+ N+
Sbjct: 240 LVTYNSLVGGLCKAGKWNDGVQLL---KDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 62/348 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P I F + F K+ L A Y SPN +++D G C S
Sbjct: 271 IIPNV-ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD--GYCMQNRLS 327
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
A + + + N + +I F SL+ + +++++ + K G++A+ +Y+IL+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C +G +A+E++ E+ L GVL DV TY ++ D + AL++ ED+
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSL---GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ + + + ++ +I G VE A +LF + G +PN +++
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG--------- 494
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L + +LS+ + L + + DGN
Sbjct: 495 ---LCKKGSLSEANILLRKMEEDGN----------------------------------- 516
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
+P TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 517 -EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 168/403 (41%), Gaps = 59/403 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ + T +D GD K RAI+ED++ ++ ++ L++ A + T +
Sbjct: 22 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSI 81
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTI 369
+ M++ G D +YN ++ C +G A E E VKH+ V TY +I
Sbjct: 82 FHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPT------VATYGSI 135
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A A + E+ S G+ N I +SSLI+ G +++A + EEM++ G
Sbjct: 136 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 195
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ A V+A + + A F+S
Sbjct: 196 APNVYTWNSLMDALVKAEEINEALICFQSM------------------------------ 225
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
K P T TY+IL+ C Y + EM+ GL PN
Sbjct: 226 -----------------KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 268
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T +I GN+ A + + + +G PD ++ I+ + R +A+ +FE
Sbjct: 269 VVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFE 328
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
E + + N+ I+LL A ++ + + AV +++ K+
Sbjct: 329 ETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLREIAKS 371
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + + + K L A ++ +K N+ + ++ID G G ++
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 184
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I E++ + + N+Y +NSLM+ V A ++ L +++M+++ + +Y+IL+
Sbjct: 185 LILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 244
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ K L +V TY+T++ A A + E + G
Sbjct: 245 CRVQKYNKAFVFWQEMQ----KQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGG 300
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVE 445
P+ ++++LI ++A +A H+FEE GC N + C LL A C+E
Sbjct: 301 IPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIE 356
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 242 RAYDASK----KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+AY+A + KH+ P + +IID ++ ++E+ +S+ + LN+ V++SL
Sbjct: 112 KAYEALEEMKVKHVP-PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 170
Query: 298 MN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++ V D + + + M K G+ ++ ++N L+ A V A+EI +
Sbjct: 171 IDGFGKVGRIDEAYL--ILEEMMKKGLAPNVYTWNSLMDA------LVKAEEINEALICF 222
Query: 354 EAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ +K + +TYS ++ + + A ++M G+ PN +T++++I+ A
Sbjct: 223 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKV 282
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G + A LFE G P++ N L++ A + A+ +F L ++
Sbjct: 283 GNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRI 337
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 508 RFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R +P T N M D + +A+ +++ G P+ S++ILI +G
Sbjct: 17 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 76
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I M++ G + D AY + +S ++ +A+ EEMK + P + TY +++
Sbjct: 77 ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSII 136
Query: 626 RARSRYGSLHE 636
++ L E
Sbjct: 137 DGLAKIDRLDE 147
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 14/238 (5%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G E +F+EM + GC+P+ N + +A ++ +F G
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK--------GYG 54
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
+ + S + H +T S K+ F YN ++ C
Sbjct: 55 FLPDVRSYSILIH----GLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKV 110
Query: 532 VKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA + EM+ + P ++ +ID ++ A + + + G+ +V+ Y++
Sbjct: 111 DKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 170
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + R+ +A+ + EEM + PN+ T+ +L+ A + ++E C ++M
Sbjct: 171 IDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEM 228
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 183/421 (43%), Gaps = 52/421 (12%)
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ PN+ T+++ G+C G +++ A+ + + + N + ++++ D
Sbjct: 75 QMCKPNVVTFTTLMN--GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 306 KFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + + M++L + D+ Y+ ++ G AQ ++ E ++ KG+ D+
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE---MQDKGIFP-DIV 188
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TYS ++ F + W A ++ ++ML ++P+ +T+S LINA G + A L +EM
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G PN CN LL ++ + A +F++ S + ++G
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---------- 298
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+P TYNIL+ + + + L EM
Sbjct: 299 --------------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++++ +I+ ++ A Q+ M SP++V + T I ++ +
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF EM I N +TYITL+R + G+ + L ++Q+M +G + ++ +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGN---INGSLDIFQEMISSGVYPDTITIRNM 449
Query: 663 I 663
+
Sbjct: 450 L 450
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 159/394 (40%), Gaps = 49/394 (12%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
L + D+ S+NIL+K C A +G++ L L T++T++
Sbjct: 9 LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTL----VTFNTLLHGLCVED 64
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL D+ PN +T+++L+N G V +A+ L + M++ G +PN
Sbjct: 65 RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 438 ILLQACVEACQFDRAFRLFRSW-TLS--KTQVAL------GEDYDGNTDRISNM--EHKD 486
++ + A L R LS K V + G DG N+ E +D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 487 KQSITN-------TPNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCT--DYYR 531
K + F + +S + P T++ L+ A D
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMS 580
+ L+ EM + G+ PN ++ L+D SG ++ AL++ K M++ +G+
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV Y I + + +A L+EEM H I P+ VTY +++ + L E Q
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ- 359
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ M + N LI +C+ G++ D
Sbjct: 360 --MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 183/421 (43%), Gaps = 52/421 (12%)
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ PN+ T+++ G+C G +++ A+ + + + N + ++++ D
Sbjct: 75 QMCKPNVVTFTTLMN--GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 306 KFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + + M++L + D+ Y+ ++ G AQ ++ E ++ KG+ D+
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE---MQDKGIFP-DIV 188
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TYS ++ F + W A ++ ++ML ++P+ +T+S LINA G + A L +EM
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G PN CN LL ++ + A +F++ S + ++G
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---------- 298
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+P TYNIL+ + + + L EM
Sbjct: 299 --------------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++++ +I+ ++ A Q+ M SP++V + T I ++ +
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF EM I N +TYITL+R + G+ + L ++Q+M +G + ++ +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGN---INGSLDIFQEMISSGVYPDTITIRNM 449
Query: 663 I 663
+
Sbjct: 450 L 450
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 159/394 (40%), Gaps = 49/394 (12%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
L + D+ S+NIL+K C A +G++ L L T++T++
Sbjct: 9 LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTL----VTFNTLLHGLCVED 64
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL D+ PN +T+++L+N G V +A+ L + M++ G +PN
Sbjct: 65 RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 438 ILLQACVEACQFDRAFRLFRSW-TLS--KTQVAL------GEDYDGNTDRISNM--EHKD 486
++ + A L R LS K V + G DG N+ E +D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 487 KQSITN-------TPNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCT--DYYR 531
K + F + +S + P T++ L+ A D
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMS 580
+ L+ EM + G+ PN ++ L+D SG ++ AL++ K M++ +G+
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV Y I + + +A L+EEM H I P+ VTY +++ + L E Q
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ- 359
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ M + N LI +C+ G++ D
Sbjct: 360 --MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 52/265 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++ +I+ GD ++ + +++ S V N+ N+L++ ++ LK LE
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 311 VYKNMQKL-----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
++K MQK GV D+ +YNIL+ G + A+E+Y E+ H +G++
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIV 335
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D TYS+++ A ++ + M S +PN +T+++LI AG+V+ +
Sbjct: 336 P-DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 420 LF-----------------------------------EEMLQAGCEPNSQCCNILLQACV 444
LF +EM+ +G P++ +L
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Query: 445 EACQFDRAFRLFRSWTLSKTQVALG 469
+ RA + +S +G
Sbjct: 455 SKEELKRALAMLEELQMSMDHHLVG 479
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 176/415 (42%), Gaps = 46/415 (11%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V + VFN L+NV LK VY M G+ D+ + N L+KA C A A
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ ++ + + GV D T++T+++ F + + AL+VK M+ AG +P +T + L
Sbjct: 218 LM---LEEMSSHGVAP-DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
IN G VE A+ ++ + G EP+ N + + A ++
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM------DL 327
Query: 465 QVALGEDYD--------------GNTDRISNMEHK--DKQSITNTPNF----VPNSHYSS 504
+ G D D G D + ++ D+ + +T F V S +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 505 FDKRF---------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
++ P T+NIL+ A C D + L EM++ G +P+ +++ I
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G + AL +L M +G V Y T I + R+++A +F++M
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
I + VT+ TL+ + + + + + + M K G + N+ ++ +C+
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELI---EQMVKEGLQPNNITYNSILTHYCK 559
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 62/443 (13%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +++ + +P+ + I+ G G + + ++R + +
Sbjct: 65 EQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRA 124
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKL-----GVMADMASYNILLKACCLAGNTVLAQEI 346
V S + A +F V + +L GV AD +N LL L + +
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y E + +G+ + DV T +T++K A + A+ + E+M S GV P+ T+++L+
Sbjct: 185 YNE---MTGRGI-QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQ 240
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G +E A+ + +M++AGC P N+L+ C+ R
Sbjct: 241 GFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING---YCKMGRV-------------- 283
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
ED G +Q I + F+P TYN + C
Sbjct: 284 ---EDALGYI----------QQEIAD-----------------GFEPDQVTYNTFVHGLC 313
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + AL M+ M G P+ ++ +I+ +G ++ A I+ M + G PD
Sbjct: 314 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+ T I RL++A L E+ + P++ T+ L+ A + G H + ++
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH---LGIRLF 430
Query: 645 QDMWKAGYKANDTYLKELIEEWC 667
++M +G ++ LI+ C
Sbjct: 431 EEMKSSGCTPDEVTYNILIDHLC 453
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 167/384 (43%), Gaps = 32/384 (8%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N+++N + +L + M G + D ++N L+ A L+ L +E
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA--LSSQNRL-EEAL 392
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ L KG L DV+T++ ++ + +++ E+M S+G TP+ +T++ LI+
Sbjct: 393 DLARELTVKG-LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
+ G + A+ L EM GC ++ N ++ A + + + A +F + +S++
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI + +Q + + +P TYN ++
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMV-----------------KEGLQPNNITYNSIL 554
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C KA ++ M G + +++ LI+ +G + AL++L+ MR G+
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P AY I+ R L+ A +LF EM P+ +TY + R+ R G +++
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG--PIKEA 672
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+M G+ + + L E
Sbjct: 673 FDFLVEMVNKGFMPEFSSFRMLAE 696
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 165/403 (40%), Gaps = 42/403 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I + VT N +V + N H + L+V M + G D+ +YN ++ CL+
Sbjct: 294 IADGFEPDQVTYNTFVHG--LCQNGH-VSHALKVMDLMLQEGHDPDVFTYNTVIN--CLS 348
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L E G V + +G L D T++T++ + + AL + ++ G++P+
Sbjct: 349 KNGEL-DEAKGIVNQMVDRGCLP-DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
T++ LINA G + LFEEM +GC P+ NIL+ + A L
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 457 --RSWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSITNTPNFVPNSHYSSFDKR 508
S ++ V D RI E D Q I+ +
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS--------------- 511
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
T+N L+ C A L+ +M GL PN+I++ ++ GN++
Sbjct: 512 ------AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A IL+ M +G DVV Y T I ++ R + A L M+ I+P Y +++
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ R +L + L ++++M + G + K + C G
Sbjct: 626 SLFRRNNLRD---ALNLFREMTEVGEPPDALTYKIVFRSLCRG 665
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 135/339 (39%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD ++E+++S T + +N L++ + L L+
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G +YN ++ A C A+E++ + ++A+G+ + V T++T++
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ---MDAQGISRSAV-TFNTLI 519
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
AK A ++ E M+ G+ PN IT++S++ G +++A + E M G E
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R +
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIK---------------------------- 611
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + L EM VG P+
Sbjct: 612 -------------------GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ + C G G ++ A L M G P+ ++
Sbjct: 653 LTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 691
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G+ PDVV T IK R+ +++ A + EEM + + P+ T+ TL++ GS
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
++ L V M +AG + LI +C+ G ++D
Sbjct: 248 ---IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285
>gi|298714808|emb|CBJ25707.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1273
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 188/438 (42%), Gaps = 44/438 (10%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L CN ++ K +++S + K PN +I +CG GD ++ A E
Sbjct: 725 LACN---DWDKAEEILSMM------KSRAIKPNEVTYTELISICGRSGDVHQALAQLERA 775
Query: 283 RSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG---VMADMASYNILLKACCLA 337
R ++ N+ +N+ ++V A ++ L + + MQ G + D+ ++N ++ AC A
Sbjct: 776 RRNGLSPNLINYNACVDVCAKTGEVDRALALLEQMQTSGDPALTPDLVTFNSVINACAKA 835
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ L ++ E+K A G LK D+ +++ + + AL + + M S G+ P+
Sbjct: 836 GDWALTLWLFSEIK---AAG-LKADIQSFNAALDACTKGSNPEAALALLKRMKSQGLEPD 891
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
I++ S I AC G A+ L +M Q G EP N++++ + A L +
Sbjct: 892 AISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLK 951
Query: 458 SWTLSKTQ-------VALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDK-- 507
S A+G G ++ ++ + + TP F NS S +
Sbjct: 952 SMKAEGIAADAYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTRFCWNSIISVHSRTG 1011
Query: 508 ------------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS-WT 552
+ S TT++ +M C D+ L+ EM GL PN +T
Sbjct: 1012 NTTAAMTLMDEMKQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYT 1071
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+ AC +G + A ++K MR+DG +PD+ +YTT C R + A L E MK
Sbjct: 1072 LLVAAC-RAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKID 1130
Query: 613 QIQPNLVTYITLLRARSR 630
I Y L A R
Sbjct: 1131 GIPATKKIYAAALAACGR 1148
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 153/380 (40%), Gaps = 64/380 (16%)
Query: 267 GICGDYMKSRAIYE-------DLRSQNVTLNIYVFNSLM-NVNAHDLKFTLEVYKNMQKL 318
GIC D ++E + RSQ ++ NI F + + + +D E+ M+
Sbjct: 684 GICMDAYAKAGLWEKALELLAEARSQGLSPNIVTFTTAVRGLACNDWDKAEEILSMMKSR 743
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + +Y L+ C +G+ + +++ G L ++ Y+ V V A
Sbjct: 744 AIKPNEVTYTELISICGRSGDV---HQALAQLERARRNG-LSPNLINYNACVDVCAKTGE 799
Query: 379 WQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + E M ++G +TP+ +T++S+INACA AG + LF E+ AG + + Q
Sbjct: 800 VDRALALLEQMQTSGDPALTPDLVTFNSVINACAKAGDWALTLWLFSEIKAAGLKADIQS 859
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L AC + + A L +
Sbjct: 860 FNAALDACTKGSNPEAALALLKRM------------------------------------ 883
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTI 553
K +P +Y + AC D L+ +M GL P + +
Sbjct: 884 -----------KSQGLEPDAISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNL 932
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I+ G G+ GAL++LK M+ +G++ D Y A+ C + + A +L EEMK
Sbjct: 933 VIETVGREGDWAGALELLKSMKAEGIAADAYTYGAAVGACAKGRNPDLARALLEEMKDLG 992
Query: 614 IQPNLVTYITLLRARSRYGS 633
+ P + +++ SR G+
Sbjct: 993 LTPTRFCWNSIISVHSRTGN 1012
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 173/443 (39%), Gaps = 74/443 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ ++I+ C GD+ + ++ ++++ + +I FN+ ++ + + L
Sbjct: 819 TPDLVTFNSVINACAKAGDWALTLWLFSEIKAAGLKADIQSFNAALDACTKGSNPEAALA 878
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTV----------------------LAQEIYG 348
+ K M+ G+ D SY + AC G+ L E G
Sbjct: 879 LLKRMKSQGLEPDAISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVG 938
Query: 349 E----------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+K ++A+G+ D +TY V A + +A + E+M G+TP
Sbjct: 939 REGDWAGALELLKSMKAEGIAA-DAYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTR 997
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFR 457
W+S+I+ + G AM L +EM Q+ C+ + + ++ C + +D A RL
Sbjct: 998 FCWNSIISVHSRTGNTTAAMTLMDEMKQSMPCDETT--FSAMMHGCAQTRDWDAAGRLLE 1055
Query: 458 S-------------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+TL GE R++ K + P+ + S+
Sbjct: 1056 EMNAAGLKPNDACYYTLLVAACRAGEL------RLAEGLIKGMRKDGAAPDLYSYTTLSA 1109
Query: 505 FDKRF----------------SFKPTTTTYNILMKACCTDYYRVKALMNEM-RTVGLSPN 547
RF T Y + AC + ++ EM R+ G+ +
Sbjct: 1110 ACGRFHDWRMALRLIESMKIDGIPATKKIYAAALAACGRGEAEIAEILLEMMRSQGVELD 1169
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + + A G G + AL ++ +RE G P++ + AI+ C + + SL
Sbjct: 1170 DVGRSHALVAFGRGGRPDKALVLMDDIREKGPPPNLQCFNGAIEACALADDIDGGISLLA 1229
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM I PN V++ +L+ A R
Sbjct: 1230 EMGRAGIVPNGVSFRSLVSACER 1252
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 57/304 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT-----PNTITWSSLINACANAGLV 414
+L +YS +K A W+ A+ + + M A VT P+ + ++ + ACA AG
Sbjct: 602 RLTSASYSPALKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMTACAKAGEC 661
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E A + + G N I + A +A +++A L
Sbjct: 662 ELAHRVLSRIQACGLAANLVSYGICMDAYAKAGLWEKALELL------------------ 703
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+ +S +PN V +F TT + C D+ + +
Sbjct: 704 ----------AEARSQGLSPNIV------------TF--TTAVRGL----ACNDWDKAEE 735
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+++ M++ + PN +++T LI CG SG+V AL L+ R +G+SP+++ Y + VC
Sbjct: 736 ILSMMKSRAIKPNEVTYTELISICGRSGDVHQALAQLERARRNGLSPNLINYNACVDVCA 795
Query: 595 RSKRLKQAFSLFEEMK---HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + +A +L E+M+ + P+LVT+ +++ A ++ G + L ++ ++ AG
Sbjct: 796 KTGEVDRALALLEQMQTSGDPALTPDLVTFNSVINACAKAG---DWALTLWLFSEIKAAG 852
Query: 652 YKAN 655
KA+
Sbjct: 853 LKAD 856
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 7/229 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + F + + RD +A R + PN T++ G+ +
Sbjct: 1027 MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAE 1086
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +R ++Y + +L HD + L + ++M+ G+ A Y L AC
Sbjct: 1087 GLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKIDGIPATKKIYAAALAAC 1146
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G +A+ + ++ + ++GV +LD S + F AL + +D+ G
Sbjct: 1147 GR-GEAEIAEIL---LEMMRSQGV-ELDDVGRSHALVAFGRGGRPDKALVLMDDIREKGP 1201
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
PN ++ I ACA A ++ + L EM +AG PN L+ AC
Sbjct: 1202 PPNLQCFNGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRSLVSAC 1250
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 21/255 (8%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++ + W A+ + ++ AG+ P T+S +I C +G +E+A + + M+
Sbjct: 103 FERAIQALGAGRKWAEAVGLMSEVEEAGMVPGEDTYSGVIRDCCKSGRIEEATRMLDAMI 162
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEH 484
G +P N +L C R T T+V L G + D + +
Sbjct: 163 SKGYKPPQGVVNTVLDTCT-----------TRKNTRKVTKVLLAMRAQGLDVDDATYRKA 211
Query: 485 KDKQSITNTPNFVPNSHYSSFDK-RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
++ N P V K R + + +A + D+ + L+ T
Sbjct: 212 MKACAMANDPTQVVGVWELFVGKGRVVTDVAAAEVSRVARAMGSLGDWKGIIGLLGTKST 271
Query: 542 VGLSP----NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV--R 595
G + +S+ L+ A G+ + L ++ M +G D Y+ A K V R
Sbjct: 272 AGGGALPDLDRLSYNWLVSAHAQLGDAKAVLATIEDMGRNGHPADADTYSLAFKAFVKSR 331
Query: 596 SKRLKQAFSLFEEMK 610
+ A +F M+
Sbjct: 332 GRHWGAALDVFRAMQ 346
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 111/560 (19%), Positives = 177/560 (31%), Gaps = 141/560 (25%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ A +VP D + +R+ K + A R DA P + T++D C
Sbjct: 126 VEEAGMVPGEDT-YSGVIRDCCKSGRIEEATRMLDAMISKGYKPPQGVVNTVLDTCTTRK 184
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT---------------------L 309
+ K + +R+Q + ++ + M A T
Sbjct: 185 NTRKVTKVLLAMRAQGLDVDDATYRKAMKACAMANDPTQVVGVWELFVGKGRVVTDVAAA 244
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE--------IYGEVKHLEAKGVL-- 359
EV + + +G + D LL AG L + + +AK VL
Sbjct: 245 EVSRVARAMGSLGDWKGIIGLLGTKSTAGGGALPDLDRLSYNWLVSAHAQLGDAKAVLAT 304
Query: 360 ---------KLDVFTYSTIVKVFADAKW--WQMALKVKEDMLS--AGVTP---------- 396
D TYS K F ++ W AL V M S A TP
Sbjct: 305 IEDMGRNGHPADADTYSLAFKAFVKSRGRHWGAALDVFRAMQSSSAETTPRRVGGCVVEG 364
Query: 397 -------------------NTITWSSLINACANAG----LVEQAMHLFEEMLQAGCEPNS 433
+T W + A + A+ L EE QAG E ++
Sbjct: 365 EGVGVAEVEASAEVSSELLSTDVWCKTVTTVAQGSPPRKTLSAALSLMEEAQQAGVEVDA 424
Query: 434 QCCNILLQACVEACQFD------------RAFRLFR---SWTL------SKTQVALGEDY 472
+ +L A +A D R RL R +W + K + AL
Sbjct: 425 ATTDAVLTALGKAKGKDEKLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALD--- 481
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-------------KRFSFKPTTTTYN 519
S + ++ + + H +S K KPT TY
Sbjct: 482 -------SALSFSERGIVMPVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYA 534
Query: 520 ILMKACCTDYYRVKA-------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ AC VKA L+ EM GL P + + S A+ +L
Sbjct: 535 TAIGACAKATTNVKANARKAVLLLEEMEAAGLEPYPPAHQAALTVLAASEGHRAAMDLLA 594
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ-----PNLVTYITLLRA 627
MRE+G +Y+ A+K + + A +L + M + P++V + + A
Sbjct: 595 KMRENGTRLTSASYSPALKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMTA 654
Query: 628 RSRYGS-------LHEVQQC 640
++ G L +Q C
Sbjct: 655 CAKAGECELAHRVLSRIQAC 674
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
LM+++R G PN + I+AC + +++G + +L M G+ P+ V++ + + C
Sbjct: 1192 LMDDIREKGPPPNLQCFNGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRSLVSACE 1251
Query: 595 RSKRLKQAFSLFEEMKHYQIQP 616
R + L E M ++P
Sbjct: 1252 RKDKPDLKKDLREAMSRLGLKP 1273
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 198/447 (44%), Gaps = 58/447 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +FGK DL + R ++ + +P++ +I+ GD ++ + +
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N++ +N+++ + A L LE+ +NM+ LGV SY + + +G+
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + + +K +G++ + + + A+ A + D+ G++P+++
Sbjct: 461 PAKAIDTFETMKK---RGIMP-SIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ + AG +++A L EM+ GCEP+ N L+ +A + D A+++F
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF--- 573
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
R+ N++ PT TYN
Sbjct: 574 -----------------GRLKNLK---------------------------LAPTVVTYN 589
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ + +KA L M G PN I++ L+D + V+ AL++ M
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+PDV+ Y T I +R R+ AF F +MK + + P+ VT TL+ R+G + +
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDA 708
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIE 664
+ V + + +A + N + EL+E
Sbjct: 709 IK--VVMEFVHQACLQTNSQFWGELME 733
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 190/449 (42%), Gaps = 77/449 (17%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A+IL CN V + ++ ++ KK L + N++ + K+ I+
Sbjct: 748 AEILVCNSVCQ--DDHVMLPLIKVLCKRKKALDAQNVF------------DKFTKNLGIH 793
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L S N + + L+ N + LE++++M+ G + +YN+LL A G
Sbjct: 794 PTLESYNC-----LMDGLLGSNFTEK--ALELFEDMKSAGTHPNNFTYNLLLDA---HGK 843
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ ++Y + ++G + + T++ I+ + AL + +++S +P
Sbjct: 844 SKRINKLYDLYSEMRSRGC-EPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ LI+ AG EQAM +FEEML GC PNS NIL+ ++ + D A LF+
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K+ I +P +Y
Sbjct: 963 V--------------------------KEGI---------------------RPDLKSYT 975
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL++ C +A+ E++ GL P+ +S+ +I+ G S ++ AL + M+
Sbjct: 976 ILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNR 1035
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+SPD+ Y I + ++ A ++EE++ ++P++ TY L+R S G+
Sbjct: 1036 GISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGN---K 1092
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEW 666
Q +V++ M G N +L ++
Sbjct: 1093 DQAFSVFKKMMVVGCSPNTETFAQLPNKY 1121
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 185/441 (41%), Gaps = 47/441 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ Y P+M ++ G GD K + E+++S + NIY + +
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A + ++K M G D+ +Y +L+ A C AG A+E+Y +++
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
D TY T++ F + + +M G P+ +T++ LI A +G V++A
Sbjct: 339 ----DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRA 394
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA--LGEDY 472
+ + M G PN N ++ ++A + D A L S + T + L DY
Sbjct: 395 FDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDY 454
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
G + D +T + + KR P+ + AC Y +
Sbjct: 455 YGKSG--------DPAKAIDT--------FETMKKR-GIMPS-------IAACNASLYTL 490
Query: 533 ---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ + N++ GLSP+ +++ +L+ +G ++ A Q+L M G PDV
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I ++ R+ A+ +F +K+ ++ P +VTY LL + G ++ + L +
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEG---KILKALEL 607
Query: 644 YQDMWKAGYKANDTYLKELIE 664
+ M ++G N L++
Sbjct: 608 FGSMTESGCPPNTITFNSLLD 628
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + ++ +Y + KA + G + + + K E +L + ++Y+ ++
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGG--IGRAPFALRKMTEVGFIL--NAYSYNGLI 208
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + ALKV + M+S G+ P+ T+S+L+ A G + M+L EEM G
Sbjct: 209 HLLLPG-FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN I ++A A + D A+ +F+ ++ T + G D+ +
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMR 540
K + S S P TY LM D VK NEM
Sbjct: 328 YVKMRAS--------------------SHSPDRVTYITLMDKFGKVGDLETVKRFWNEME 367
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P+ +++TILI+A SG+V+ A +L +M G+ P++ Y T I ++++RL
Sbjct: 368 VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLD 427
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A L E M+ ++P +Y+ + YG + + + ++ M K G
Sbjct: 428 EALELLENMESLGVKPTAFSYVLFI---DYYGKSGDPAKAIDTFETMKKRG 475
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ TY+ LM A D ++ L+ EM+++GL PN ++TI I A G + ++ A
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K M ++G PDV+ YT I + +L +A L+ +M+ P+ VTYITL+
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L V++ + +M GY + LIE C+
Sbjct: 352 KVGDLETVKR---FWNEMEVDGYAPDVVTYTILIEALCK 387
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + FGK ++ A + K P++ +++ I G ++ +E+
Sbjct: 937 VIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEE 996
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ + + +N ++N + L L ++ M+ G+ D+ +YN L+ +AG
Sbjct: 997 LKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGK 1056
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A ++Y E++ + L+ VFTY+ +++ + + A V + M+ G +PNT
Sbjct: 1057 VDVAVKMYEELQLVG----LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112
Query: 400 TWSSLINACANAGLVEQ 416
T++ L N AGLV
Sbjct: 1113 TFAQLPNKYPRAGLVHN 1129
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 178/399 (44%), Gaps = 37/399 (9%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASY 327
++ +++ I+ ++ Q V ++ F+SL+ V N H L L +++M+K G++ D Y
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH-LDQALVYFRDMKKFGLVPDNVIY 296
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L+ C GN + A +I E+ LE VL DV Y+TI+ K A K+ +
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEM--LEQGCVL--DVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M+ G P+ T+++LI+ G + +A+ LF M Q +P+ N L+ +
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ ++A L +DG R H + N + H S +
Sbjct: 413 EMEKASEL----------------WDGMISRKIFPNHITYGILINA--YCSVGHVSEAFR 454
Query: 508 RF------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KPT T N ++K C D + + M G++P+HIS+ LI+
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV 514
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
N++ A + M ++G+ PD++ Y + R R+++A + +M I P+
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
TY L+ +L+E + +M + G+ +D +
Sbjct: 575 TYTALINGHVTQDNLNEA---FRFHDEMLQRGFAPDDVF 610
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 43/461 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICG-DYMK-SR 276
+++F +R + + R L A+ SK +L S N C +++ G+ D+++ +
Sbjct: 48 NLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINA--CNSLLG--GLVKIDWVELAW 103
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++ + LN+Y N ++N D KF M+ G+ ADM +YN L+ A
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G L +E + + + KG LK +FTY+ I+ + A + +ML+ G+
Sbjct: 164 CREG---LLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA-- 452
+P+T T+++L+ +A +F EML+ G P+ + L+ D+A
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279
Query: 453 -FRLFRSWTLSKTQV---ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
FR + + L V L Y N + + ++ +D+ D
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML----------EQGCVLD-- 327
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
YN ++ C + A L +EM G P+ ++T LI GN+
Sbjct: 328 ------VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 381
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL + M + + PD+VAY T I + +++A L++ M +I PN +TY L+
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
A Y S+ V + ++ M + G K +I+ +C
Sbjct: 442 A---YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 183/423 (43%), Gaps = 71/423 (16%)
Query: 265 VCGICGD-----------YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDL 305
+CG CG Y+++R + E LRS+ ++I NSL+ V +
Sbjct: 40 MCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWV 99
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ EV++ + + G+ ++ + NI++ A C G ++ + +E G+ D+ T
Sbjct: 100 ELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK---FDDVKSFLSEMEGNGIYA-DMVT 155
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + + A ++ M G+ P+ T++++IN G +A + EML
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P++ N LL VE+C+ D S+ + GE
Sbjct: 216 NIGLSPDTTTYNTLL---VESCRRD---------NFSEAKEIFGEML------------- 250
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+Q + P+ V +SS FS + Y+R +M+ GL
Sbjct: 251 -RQGVV--PDLVS---FSSLIAVFSRNRHLDQALV--------YFR------DMKKFGLV 290
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+++ +T+L+ +GN+ AL+I M E G DV+AY T + + K L A L
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F+EM P+ T+ TL+ + G++ + L+++ M + K + LI+
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNM---TKALSLFGTMTQRNIKPDIVAYNTLIDG 407
Query: 666 WCE 668
+C+
Sbjct: 408 FCK 410
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 172/410 (41%), Gaps = 60/410 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + F + + F + R L AL + KK P+ I ++ G C G+ +
Sbjct: 254 VVPDL-VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH--GYCRNGNML 310
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
++ I +++ Q L++ +N+++N + T +++ M + G + D ++ L+
Sbjct: 311 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++G + +K D+ Y+T++ F + A ++ + M+S
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQRN----IKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ PN IT+ LINA + G V +A L++ M++ G +P CN +++ C
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG---YC---- 479
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
RS SK LG M K
Sbjct: 480 -----RSGDSSKADEFLGR-----------MIAK------------------------GV 499
Query: 512 KPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ + KA + N+M GL P+ I++ ++++ G ++ A
Sbjct: 500 APDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAEL 559
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+L+ M E G++PD YT I V L +AF +EM P+ V
Sbjct: 560 VLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 206/459 (44%), Gaps = 52/459 (11%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+++ GD K+ + Y ++ + + ++ ++S++ A + +
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + +V TYS++
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGTLKKMRSDGV-EPNVVTYSSL 312
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD-----GNT-DRIS 480
+P+ NIL+ A + + D+A +F R L+ V G D G+ D +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS---------------------FDKRFSFKPTTTTYN 519
E + + TPN + Y+S D+ T +N
Sbjct: 433 YFEQMIDEGL--TPNIIV---YTSLIHGLCTCDKWDKAEELILEMLDRGICLN--TIFFN 485
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ + C + +++ L + M +G+ P+ I++ LID C +G ++ A ++L M
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD+V Y T I R R+ A +LF+EM + PN++TY +L+ G H
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ-----GLFHTR 600
Query: 638 QQCLA--VYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ A +Y + K+G + + ++ C+ + D+
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 156/363 (42%), Gaps = 24/363 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + A E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL----HMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T+SS+I A A +++AM + M++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ N +L + Q A TL K + DG +
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAI-----GTLKKMR------SDGVEPNVVTYSSLMN 314
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLS 545
N + + S KR +P TY L++ T V+ AL++ M G+
Sbjct: 315 YLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI A V+ A+ + MR+ G++P+VV Y T I V +S + A
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE+M + PN++ Y +L+ + ++ + +M G N + +I+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL---EMLDRGICLNTIFFNSIIDS 490
Query: 666 WCE 668
C+
Sbjct: 491 HCK 493
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 155/377 (41%), Gaps = 61/377 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 39 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K ++D T++ ++K + AD + V M
Sbjct: 99 IGCCCRAGRLDLGFAALGNV----VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
G P+ ++++L+ + ++A+ L M G P+ N +L +
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D+A+ ++++ D
Sbjct: 215 GDSDKAY---------------------------------------------STYHEMLD 229
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TY+ ++ A C KA+ +N M G+ P+ +++ ++ SG
Sbjct: 230 R--GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 287
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ LK MR DG+ P+VV Y++ + ++ R +A +F+ M ++P++ TY TL
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347
Query: 625 LRARSRYGSLHEVQQCL 641
L+ + G+L E+ L
Sbjct: 348 LQGYATKGALVEMHALL 364
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 59/394 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ T+IDV G + +E
Sbjct: 380 NILIC----AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T NI V+ SL++ E+ M G+ + +N ++ + C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +++++ L + +K D+ TY+T++ A A K+ M+S GV P+
Sbjct: 496 RVIESEKLF----DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ +LIN ++ A+ LF+EM+ +G PN NI+LQ + A L+ S
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T S TQ+ L +TY
Sbjct: 612 ITKSGTQLEL-----------------------------------------------STY 624
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + +AL + L ++ I+I A G ++ A +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ PDV Y+ + + L++ LF M+
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + P++ T+ID C + G ++ +
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S V +I + +L+N + L ++K M GV ++ +YNI+L+
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-------------- 385
T A+E+Y + K +L++ TY+ I+ AL++
Sbjct: 602 TAAAKELYVSI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 386 -----------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+D+ +A G+ P+ T+S + G +E+ LF M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC +S+ N +++ ++ RA
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRA 745
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 44/196 (22%)
Query: 513 PTTTTYNILMKACC----------------TDYYRVKAL--------------------- 535
PT TY IL+ CC +RV A+
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED---GMSPDVVAYTTAIK 591
+ M +G P+ S+ L+ + AL++L +M +D G PDVV+Y T +
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A+S + EM I P++VTY +++ A + ++ + + V M K G
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM---DKAMEVLNTMVKNG 266
Query: 652 YKANDTYLKELIEEWC 667
+ ++ +C
Sbjct: 267 VMPDCMTYNSILHGYC 282
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 167/347 (48%), Gaps = 21/347 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C A + + E+ KG+ + +V TY+ +V
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR---KGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A +FEEM++ +P+
Sbjct: 237 NSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ + NT + N K K+
Sbjct: 297 TYSSLING---LCLHDRIDEANQMFDLMVSKGCFPDVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S + T TYN L++ D + + ++M + G+SP+ ++
Sbjct: 352 LFRKMSQRGLVN-------NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ +++ A+ LF +
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++P++VTY T++ G HEV+ A+Y M + G ND+ L
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLQHEVE---ALYTKMKQEGLMKNDSML 508
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 170/408 (41%), Gaps = 84/408 (20%)
Query: 204 KPDV---NLAIRYACIVPRADILFCNFVREFGKK-------------RDLVSALRAYDAS 247
+PD+ N I C R + +F +E G+K L ++ R DA+
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDAL-DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-V 300
+ K +PN+ ++D G ++++ I+E++ ++ +I ++SL+N +
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 301 NAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
HD + +++ M G D+ SYN L+ C A +++ + + +G++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF---RKMSQRGLV 362
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ TY+T+++ F A + M S GV+P+ T++ L+ + GL+E+A+
Sbjct: 363 N-NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE+M ++ + + ++Q + + + A+ LF S +L
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK----------------- 464
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
KP TY +M CT + V+AL
Sbjct: 465 ------------------------------GLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+M+ GL N ++L C G G++ + +++K M G +P ++
Sbjct: 495 KMKQEGLMKND---SML---CLGDGDITISAELIKKMLSCGYAPSLLG 536
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T+NI++ CC +++ +M +G P+ ++ L++ V A+ ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD+VAY I +++R+ A F+E+ I+PN+VTY L+ G
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ + L +DM K N L++ +
Sbjct: 242 NDAARLL---RDMIKRKITPNVITYSALLDAF 270
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L A + G + E ++ ++++M + + LI C
Sbjct: 267 LDAFVKNGKVLEAKE---IFEEMVRMSIDPDIVTYSSLINGLC 306
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +N L+ A Y V +L +M +G+ + ++ I+I+ V AL +
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PD V + + R R+ A SL ++M +P++V Y ++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V L ++++ + G + N L+ C
Sbjct: 203 T---RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLC 236
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 32/419 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK +L AL+ + K SP++Y +I G C GD K + E+++ N+ +
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIH--GFCKQGDVEKGLYLIEEMKYSNMEPS 394
Query: 291 IYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++SL H L +L++++++ G D +Y+IL+K C+ G+ A
Sbjct: 395 LVSYSSLF----HGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E+ + L D + ++V F W AL+ ML G+ P+ T + +
Sbjct: 451 KLMEEM----VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G VE+A++L EM G PN N ++ + + +RA LF L +
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELF-PLMLKRN 565
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ Y D + + K + Y+ K P Y IL+
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALML----------YARMLK-IGVTPDMVAYTILINI 614
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A L +M G++P+ IS+T +I G++ A + M + G P
Sbjct: 615 LCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPT 674
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
VV YT+ + + R+ A L +EMK I P++VTY L+ A R G+L + + L
Sbjct: 675 VVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 194/468 (41%), Gaps = 89/468 (19%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH--------DLKFTLEVYKNMQKLGVMADMASY 327
R+++E+++S N++ + +MN D + E+ + M++ G + +Y
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + C G A + + + A G++ +V+ Y+ I+ ALKV E
Sbjct: 294 STYIYGLCRVGYVESALDFVRSL--ISANGLV--NVYCYNAIIHGLCKKGELDEALKVLE 349
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M S G++P+ T+S LI+ G VE+ ++L EEM + EP+ + L +
Sbjct: 350 EMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKR 409
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI----------SNMEHKDKQSITNTPNFV 497
D + +FR A G YD I + HK + + N
Sbjct: 410 LSDISLDIFRDLG------AAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN-NLA 462
Query: 498 PN-SHYSSFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--L 535
P+ S++ S F P+ T N+++ A C + +A L
Sbjct: 463 PDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNL 522
Query: 536 MNEMRTVGLSPNHIS-----------------------------------WTILIDACGG 560
MNEM+T G+ PN + ++ LID
Sbjct: 523 MNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAK 582
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
N + AL + M + G++PD+VAYT I + R+ +A++LF++M + P+ ++
Sbjct: 583 QSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKIS 642
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y +++ R G ++++ A++ +M + G+ L++ +C+
Sbjct: 643 YTSVIAGFCRIG---DMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK 687
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 63/430 (14%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL--------------------RSQNV 287
KK+ S ++ RT+++V + G +M+ A+ D+ ++
Sbjct: 116 KKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDA 175
Query: 288 TLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ VF+ L+ V A + L+ ++V+ +K G+ S N LLK A +
Sbjct: 176 ARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRS 235
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ------MALKVKEDMLSAGVTPNTI 399
++ E+K +VFTY+ ++ + + + A ++ E+M G +P +
Sbjct: 236 LFEEMKSTGPPP----NVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVV 291
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
T+S+ I G VE A+ ++ A N C N ++ + + D A ++
Sbjct: 292 TYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM 351
Query: 457 RSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQSITNT-PNFVPNSHYSSF-----DK 507
+S +S T L + D + ++ +N P+ V YSS K
Sbjct: 352 KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS---YSSLFHGLCKK 408
Query: 508 RFS--------------FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
R S +K T Y+IL+K C D LM EM L+P+ ++
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+ G AL+ +M E G+ P + I R R+++A +L EM+
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528
Query: 612 YQIQPNLVTY 621
I PNL TY
Sbjct: 529 QGIFPNLFTY 538
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 151/418 (36%), Gaps = 112/418 (26%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ VF SL A +KF+ M+K G + ++ ++ LAG
Sbjct: 95 VKVFKSLNWEVARHIKFS----TTMKKYGFSRSIDAFRTVVNVLALAG------------ 138
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADA-KWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
H+E +L+ D+ Y KV DA + + + L+ +D + I + LI A
Sbjct: 139 MHMEVYALLR-DIVCYYN--KVNLDAFELFPILLESPKD-----AARSVIVFDLLIKVFA 190
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
++E A+ +F + + G E +++ CN LL+ EA + + LF
Sbjct: 191 ANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF------------- 237
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--- 526
++ T P P TY I+M C
Sbjct: 238 ----------------EEMKSTGPP------------------PNVFTYTIMMNFYCKGN 263
Query: 527 -----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
D + ++ EM G SP ++++ I G VE AL ++ +
Sbjct: 264 FGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLV 323
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG----SLHEV 637
+V Y I + L +A + EEMK I P++ TY L+ + G L+ +
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 638 QQ----------------------------CLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ L +++D+ AGYK + T LI+ +C
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC 441
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 206/459 (44%), Gaps = 52/459 (11%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+++ GD K+ + Y ++ + + ++ ++S++ A + +
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + +V TYS++
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGTLKKMRSDGV-EPNVVTYSSL 312
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD-----GNT-DRIS 480
+P+ NIL+ A + + D+A +F R L+ V G D G+ D +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS---------------------FDKRFSFKPTTTTYN 519
E + + TPN + Y+S D+ T +N
Sbjct: 433 YFEQMIDEGL--TPNIIV---YTSLIHGLCTCDKWDKAEELILEMLDRGICLN--TIFFN 485
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ + C + +++ L + M +G+ P+ I++ LID C +G ++ A ++L M
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD+V Y T I R R+ A +LF+EM + PN++TY +L+ G H
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ-----GLFHTR 600
Query: 638 QQCLA--VYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ A +Y + K+G + + ++ C+ + D+
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 156/363 (42%), Gaps = 24/363 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + A E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL----HMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T+SS+I A A +++AM + M++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ N +L + Q A TL K + DG +
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAI-----GTLKKMR------SDGVEPNVVTYSSLMN 314
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLS 545
N + + S KR +P TY L++ T V+ AL++ M G+
Sbjct: 315 YLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI A V+ A+ + MR+ G++P+VV Y T I V +S + A
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE+M + PN++ Y +L+ + ++ + +M G N + +I+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL---EMLDRGICLNTIFFNSIIDS 490
Query: 666 WCE 668
C+
Sbjct: 491 HCK 493
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 155/377 (41%), Gaps = 61/377 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 39 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K ++D T++ ++K + AD + V M
Sbjct: 99 IGCCCRAGRLDLGFAALGNV----VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
G P+ ++++L+ + ++A+ L M G P+ N +L +
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D+A+ ++++ D
Sbjct: 215 GDSDKAY---------------------------------------------STYHEMLD 229
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TY+ ++ A C KA+ +N M G+ P+ +++ ++ SG
Sbjct: 230 R--GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 287
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ LK MR DG+ P+VV Y++ + ++ R +A +F+ M ++P++ TY TL
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347
Query: 625 LRARSRYGSLHEVQQCL 641
L+ + G+L E+ L
Sbjct: 348 LQGYATKGALVEMHALL 364
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 59/394 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ T+IDV G + +E
Sbjct: 380 NILIC----AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T NI V+ SL++ E+ M G+ + +N ++ + C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +++++ L + +K D+ TY+T++ A A K+ M+S GV P+
Sbjct: 496 RVIESEKLF----DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ +LIN ++ A+ LF+EM+ +G PN NI+LQ + A L+ S
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T S TQ+ L +TY
Sbjct: 612 ITKSGTQLEL-----------------------------------------------STY 624
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + +AL + L ++ I+I A G ++ A +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ PDV Y+ + + L++ LF M+
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 112/268 (41%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + P++ T+ID C + G ++ +
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S V +I + +L+N + L ++K M GV ++ +YNI+L+
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-------------KVFADAKWWQMALKVK 386
T A+E+Y + K +L++ TY+ I+ ++F + + L+ +
Sbjct: 602 TAAAKELYVSI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 387 ------------------EDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+D+ +A G+ P+ T+S + G +E+ LF M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC +S+ N +++ ++ RA
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRA 745
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 44/196 (22%)
Query: 513 PTTTTYNILMKACC----------------TDYYRVKAL--------------------- 535
PT TY IL+ CC +RV A+
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED---GMSPDVVAYTTAIK 591
+ M +G P+ S+ L+ + AL++L +M +D G PDVV+Y T +
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A+S + EM I P++VTY +++ A + ++ + + V M K G
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM---DKAMEVLNTMVKNG 266
Query: 652 YKANDTYLKELIEEWC 667
+ ++ +C
Sbjct: 267 VMPDCMTYNSILHGYC 282
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 194/424 (45%), Gaps = 33/424 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ T++ G + ++E++R NI FN+L+ ++ + F ++V
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ ++ + D+ ++N LL + G + E+ G K ++ G + + T++T++
Sbjct: 454 FEEIKICECVPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLIS 509
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+ + ML AGVTP+ T+++++ A A GL EQ+ + EM C+P
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N LL A + +R AL E+ + K +
Sbjct: 570 NELTYCSLLHAYANGKEVER-------------MSALAEEIYSGIIEPQAVLLKTLVLVY 616
Query: 492 NTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYR------VKALMNEMRTVGL 544
+ + + + + + R F P TT N A + Y R ++N ++ G
Sbjct: 617 SKSDLLTETERAFLELREQGFSPDITTLN----AMVSIYGRRRMVSKTNEILNFIKDSGF 672
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ ++ L+ + + E + IL+ + GM PD++++ T I R+ R+K+A
Sbjct: 673 TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR 732
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EMK + + P+++TY T + + Y S + + V + M K G K N LI+
Sbjct: 733 IFAEMKDFGLAPDVITYNTFI---ASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789
Query: 665 EWCE 668
+C+
Sbjct: 790 WFCK 793
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 193/446 (43%), Gaps = 59/446 (13%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF---------- 307
+ II V G G + ++ DLR+ V ++IY + SL+ A + ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 308 --------------TLEVY--------------KNMQKLGVMADMASYNILLKACCLAGN 339
L VY +M+ GV D+ +YN L+ +C
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E+K A G D TY+ ++ V+ ++ + A++V ++M ++G P+ +
Sbjct: 307 YEEAAEVFEEMK---AAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+A A GL+++AM L +M++ G +P+ LL + + D A ++F
Sbjct: 363 TYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ Q + + + M N NFV K P T+N
Sbjct: 423 RVAGCQPNI-----CTFNALIKMH-------GNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI A G + A+ I + M +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++PD+ Y + R +Q+ + EMK + +PN +TY +LL A Y + EV
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA---YANGKEV 587
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELI 663
++ A+ ++++ + LK L+
Sbjct: 588 ERMSALAEEIYSGIIEPQAVLLKTLV 613
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 30/395 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ ++ + PN+ +I + G G++++ ++E+++ +I +N+L+
Sbjct: 415 AMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V N D + + V+K M++ G + + ++N L+ A G A IY + +
Sbjct: 475 VFGQNGMDSEVS-GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY---RRMLDA 530
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV D+ TY+ ++ A W+ + KV +M PN +T+ SL++A AN VE+
Sbjct: 531 GVTP-DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYD 473
L EE+ EP + L+ ++ + +RAF R S L
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA--- 646
Query: 474 GNTDRISNMEHKDKQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYY- 530
+S + S TN NF+ +S F P+ TTYN LM T+++
Sbjct: 647 ----MVSIYGRRRMVSKTNEILNFIKDS---------GFTPSLTTYNSLMYMYSRTEHFE 693
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + ++ E+ G+ P+ IS+ +I A +G ++ A +I M++ G++PDV+ Y T I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+A + + M +PN TY +L+
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLI 788
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 58/423 (13%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D+ K +P++Y T+I C Y ++ ++E++++ + + +N+L++V +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ +EV K M+ G + +YN L+ A G +L + + E+K K +K D
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDG--LLDEAM--ELKSQMVKKGIKPD 395
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VFTY+T++ F A+KV E+M AG PN T+++LI N G + M +FE
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
E+ C P+ N LL G+ +G +S +
Sbjct: 456 EIKICECVPDIVTWNTLL-------------------------AVFGQ--NGMDSEVSGV 488
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ K R F P T+N L+ A C + + A+ M
Sbjct: 489 FKEMK--------------------RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G++P+ ++ ++ A G E + ++L M++ P+ + Y + + K ++
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+ +L EE+ I+P V TL+ S+ L E ++ + ++ + G+ + T L
Sbjct: 589 RMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERA---FLELREQGFSPDITTLN 645
Query: 661 ELI 663
++
Sbjct: 646 AMV 648
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 54/351 (15%)
Query: 318 LGVMADMASYNIL--LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
L +D S++IL +K LA ++ V++ E + L + I+ V
Sbjct: 139 LNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASI-LSNSVVAVIISVLGK 197
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + D+ + GV + ++SLI A A+ G +A+ +F+++ + GC P
Sbjct: 198 EGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLIT 257
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N++L ++ W+ +I+ + K S
Sbjct: 258 YNVILNVYG---------KMGMPWS-----------------KIAGLVDSMKSS------ 285
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTI 553
P TYN L+ +C + Y + EM+ G SP+ +++
Sbjct: 286 --------------GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNA 331
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+D G S A+++LK M G +P +V Y + I R L +A L +M
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
I+P++ TY TLL + G + + V+++M AG + N LI+
Sbjct: 392 IKPDVFTYTTLLSGFEKTG---KDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ I+ +L V + K L RA+ ++ SP++ ++ + G
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I ++ T ++ +NSLM + + F + ++ + + G+ D+ S+N +
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V + M+
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFG----LAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 391 SAGVTPNTITWSSLIN 406
G PN T++SLI+
Sbjct: 774 KNGCKPNQNTYNSLID 789
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 195/447 (43%), Gaps = 58/447 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A K + N+ ++D G ++ +++
Sbjct: 322 VTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQ 381
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A L LE++ +M G + +Y + + +G
Sbjct: 382 MKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGE 441
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A + MA +V ++ S GV P+ I
Sbjct: 442 SLKAIKRY---ELMKSKGIVP-DVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI 497
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + PT TYN
Sbjct: 558 -----------------------------------------------KEMNLDPTDCTYN 570
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM + PN I++ ++D +G V AL +L M
Sbjct: 571 TLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMK 630
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G PD+ +Y TA+ V+ RL +AF +F +MK + P+ T T+L + + G ++E
Sbjct: 631 GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEA 689
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIE 664
L Y + + G KA+ + L+E
Sbjct: 690 LHTLKEY--ILQPGSKADRSSFHSLME 714
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 170/399 (42%), Gaps = 71/399 (17%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+++ + + S V+L +N+L+ V+ + + ++ M++LG D +YN++
Sbjct: 758 LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L A G ++ +++ K + KG V TY+TI+ +K A+ + ++
Sbjct: 818 LDA---MGKSMRIEDMLKVQKEMHCKGYESTYV-TYNTIISGLVKSKMLYEAMDLYYKLM 873
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +P T+ L++ G +E A LF+EML GC+PN NILL
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG-------- 925
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+RL GNT+++ + N V
Sbjct: 926 --YRL-----------------AGNTEKVCELFQ----------NMVDQG---------- 946
Query: 511 FKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y +L+ A CT Y+R ++ +GL P+ I++ +LI G SG
Sbjct: 947 INPDIKSYTVLIGALCTAGRLNDSLSYFR------QLTELGLEPDLITYNLLIHGLGRSG 1000
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A+ + M + G++P++ Y + I + + +A ++EE+ +PN+ TY
Sbjct: 1001 RLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYN 1060
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLK 660
L+ S GS A Y M G N TY++
Sbjct: 1061 ALIGGYSVSGS---TDNAFASYGQMIVGGCPPNSSTYMQ 1096
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 183/459 (39%), Gaps = 94/459 (20%)
Query: 225 CNFV----REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
CN++ R G+ RD+ + +D ++ + N+ TI G+ G +
Sbjct: 115 CNYMLELMRAHGRVRDMA---QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALP 171
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + LN Y +N L+ V + + +EVYK M G++ + +Y++L+ A
Sbjct: 172 MMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLA----- 226
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G K DV T+V W + +M GV PN
Sbjct: 227 --------FG-----------KRDV---ETVV--------WLL-----REMEDHGVKPNV 251
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++ I AG E+A + ++M GC+P+ +L+Q +A + A +F
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVF-- 309
Query: 459 WTLSKTQVALGEDYDGNTDRISNM-------EHKDKQSITNTPNFVPNSHYSS------- 504
W + + D DR++ + ++ D +S+ N + Y+
Sbjct: 310 WKMKAS--------DQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTA 361
Query: 505 -----------------FD--KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
FD K+ +P +YN L+ L N M G
Sbjct: 362 VVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHG 421
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+PN ++ + I+ G SG A++ ++M+ G+ PDVVA + +S RL A
Sbjct: 422 PTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAK 481
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+F E+K + P+ +TY +++ S+ + E + +
Sbjct: 482 RVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFS 520
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 513 PTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
P+ TY++LM A D V L+ EM G+ PN S+TI I G +G E A +IL
Sbjct: 215 PSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKIL 274
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M ++G PDVV T I++ + R+ A +F +MK +P+ VTYITLL +
Sbjct: 275 QKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLL---DKC 331
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + + + ++ M GY N +++ C+
Sbjct: 332 GDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQ 368
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 177/413 (42%), Gaps = 37/413 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++ID G ++ I+ +L+ N+ +N+L+ + +K + +
Sbjct: 529 PDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++ +YN +L C G A G + ++ KG + D+ +Y+T +
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYA---LGMLYNMTMKGCMP-DLSSYNTALH 644
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE-MLQAGCE 430
A ++ M + P+ T +++ + GL+ +A+H +E +LQ G +
Sbjct: 645 GLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSK 703
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EH--KDK 487
+ + L++ ++ +++ + LS+ L +D+ +S + H K K
Sbjct: 704 ADRSSFHSLMEGILKRAGMEKSIEFAENIALSRI---LLDDF-----FLSPLIRHLCKSK 755
Query: 488 QSITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTV 542
+++ +H K+F T +YN L+ + + L +EM+ +
Sbjct: 756 KAL--------EAH--ELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++ +++DA G S +E L++ K M G V Y T I V+SK L +A
Sbjct: 806 GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ ++ P TY LL + G + + + ++ +M G K N
Sbjct: 866 MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAED---LFDEMLDYGCKPN 915
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN I +++ + G+ K +++++ Q + +I + L+ A L +L
Sbjct: 914 PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY 973
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ + +LG+ D+ +YN+L+ +G A ++ + +E G+ +++TY++++
Sbjct: 974 FRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFND---MEKSGIAP-NLYTYNSLIL 1029
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A K+ E++L G PN T+++LI + +G + A + +M+ GC P
Sbjct: 1030 YLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPP 1089
Query: 432 NS 433
NS
Sbjct: 1090 NS 1091
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 27/386 (6%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDL 305
KK PN+Y ++I G + AI + + V N +N+LMNV ++
Sbjct: 360 KKKGCKPNVYTYTSLIS-----GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 306 KF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L V+ M K G + + +SYN L++ C G+T A + + KG +
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM----LKGRPTPTL 470
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ I+K + D+ +A++V E M + G P+ +++ LI+ +E A +F E
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+ G PN L+ + + D A R+ S + N + +
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR--------PNVQTYNVLI 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
H +T NF P TY+ ++ C + AL N+M
Sbjct: 583 H----GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN +++ LI A G G VE A ++ +++ G+ PD V Y I+VCV S ++ +
Sbjct: 639 HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDR 698
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
AF EM + QP L TY L++
Sbjct: 699 AFDFLGEMINAGCQPTLQTYDVLIKG 724
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 219/554 (39%), Gaps = 77/554 (13%)
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV----PRADIL-FCNFVREFG 232
M +LE P +++ C NK ++ A+ Y + P+ + + + +
Sbjct: 145 MRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLN 204
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K + + Y + PN+ I ++I+ G+ + +I + + + +
Sbjct: 205 KLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTF 264
Query: 293 VFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ S++ DL E++ M + G + A+Y+ L+ C +G A + E+
Sbjct: 265 TYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
GVL V T++ + D + A K+ DM G PN T++SLI+
Sbjct: 325 TR---HGVLP-TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--- 377
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLS 462
+ A+ LF M + G PN+ N L+ +E + D A +F T S
Sbjct: 378 QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSS 437
Query: 463 KTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------ 512
++ G G+T++ ++NM T N + + S D + +
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497
Query: 513 -----PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA-------- 557
P +Y L+ C + + NEM GL PN +++T LI
Sbjct: 498 ANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLD 557
Query: 558 CGG--------SG-------------------NVEGALQILKIMREDGMSPDVVAYTTAI 590
C SG N GA ++ K+M E+ +SPDVV Y+T I
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + A +F +M + PNL TY +L++A + G + E ++ ++ ++ K
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE---MFSELKKQ 674
Query: 651 GYKANDTYLKELIE 664
G ++ ++IE
Sbjct: 675 GLIPDEVTYVKMIE 688
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 152/368 (41%), Gaps = 28/368 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++ + + N + +L++ D K + + M++ G ++ +YN+L+
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N A+E+ + LE K + DV TYST++ + +AL++ M+ G
Sbjct: 586 TKQNNFSGAEELCKVM--LEEK--ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T+SSLI A G VE+A +F E+ + G P+ +++ CV + + DRAF
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHY---------- 502
+ Q L + YD + N + HK + PN S +
Sbjct: 702 FLGEMINAGCQPTL-QTYDVLIKGLQNEMVYHK----LVALPNAASTSTFDDQIINKDVI 756
Query: 503 ---SSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
SS F+ + Y+ L+ ++ L M + PN ++ + +
Sbjct: 757 SVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLIS 816
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ V+ A+ + K M + + Y I + R K+A +FE+M + +
Sbjct: 817 LLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876
Query: 618 LVTYITLL 625
+ + L+
Sbjct: 877 EIVWTILI 884
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 205/474 (43%), Gaps = 60/474 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K + +A ++ +K+ L S N I II C IC + ++ A+
Sbjct: 355 VTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQIC-NMDRAEALVR 413
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ Q + I +++++M+ + + L V+ +++ G + SY L+ G
Sbjct: 414 EMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVG 473
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A EI K ++ G+ K ++ TYS ++ F K W A V ED G+ P+
Sbjct: 474 KVSKALEI---SKMMKMSGI-KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDV 529
Query: 399 ITWSSLINA-----------C------------------------ANAGLVEQAMHLFEE 423
+ ++++I A C A AG + +A+ +F+
Sbjct: 530 VLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDM 589
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M ++GC P N L+ VE Q +A + ++ G +
Sbjct: 590 MRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGV---------GPNEHTYTTL 640
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
+ S+ +T Y + + + TY L+K+CC AL EM
Sbjct: 641 MQGYASLGDTEKAF---QYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSA 697
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ N + ILID G+V A +++ MR++G+ PD+ YT+ I C ++ +++
Sbjct: 698 KNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQK 757
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A + +EM+ I+PNL TY TL+ +R S+ E + L+ +++M AG+K +
Sbjct: 758 ATEIIQEMEASGIKPNLKTYTTLINGWAR-ASMPE--KALSCFEEMKLAGFKPD 808
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 192/452 (42%), Gaps = 69/452 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
++ G GD +R +E +R++ + + +V++SL++ A D++ L + M++ G
Sbjct: 290 MVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 349
Query: 320 VMADMASYNILLKACCLAGNTVLAQE---------------IYGE--------------- 349
+ + +Y+I++ GN A IYG
Sbjct: 350 IEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAE 409
Query: 350 --VKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V+ +E +G+ +D+ Y T++ + + L V + + G P+ I++ LIN
Sbjct: 410 ALVREMEEQGIDAPIDI--YHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLIN 467
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KT 464
G V +A+ + + M +G + N + ++L+ ++ + AF +F +T K
Sbjct: 468 LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKP 527
Query: 465 QVALGEDYD------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSS---------- 504
V L + GN DR + M+ + + T T F+P H +
Sbjct: 528 DVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRT--FLPIIHGFARAGEMRRALE 585
Query: 505 -FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
FD +R PT TYN L+ KA +++EM G+ PN ++T L+
Sbjct: 586 IFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYA 645
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G+ E A Q ++R +G+ DV Y +K C +S R++ A ++ +EM I N
Sbjct: 646 SLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF 705
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y L+ +R G + E + Q M K G
Sbjct: 706 VYNILIDGWARRGDVWEAADLM---QQMRKEG 734
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D PN + T++ GD K+ + LR++ + +++Y
Sbjct: 611 EKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVY 670
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 671 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADL---M 727
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +G+L D+ TY++ + A Q A ++ ++M ++G+ PN T+++LIN A
Sbjct: 728 QQMRKEGLLP-DIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWAR 786
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A + E+A+ FEEM AG +P+ + L+ + + F +++
Sbjct: 787 ASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSY 829
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 55/395 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+YE++ N+ +I FN ++N+ + K+ + +M+ GV ++ +YN ++ C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
L G A +I+ +K LK D +TY++ + + + A V +L +G+
Sbjct: 264 LRGKFEAASKIFKTMKDKN----LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ C N G +++A +EM+ G + N+L+ A L
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA------------L 367
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFD 506
F + + + D I M K + T N N + S FD
Sbjct: 368 FLEKRIEEAE-----------DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 507 KRF--SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDA 557
+ + +PT TY L+ D + + M+E G+ P+ I + LID
Sbjct: 417 EMVEKNIRPTVETYTSLI-----DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDG 471
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A Q+LK M + PD V + T ++ R +++++A L +EMK I+P+
Sbjct: 472 HCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++Y TL+ S+ G +++ L V+ +M G+
Sbjct: 532 HISYNTLISGYSKRG---DMKDALEVFDEMLSLGF 563
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 118 SGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGL 177
S I + +E RI+ GVL KL E G+ P + + L + C + G
Sbjct: 292 SFISRLCKERRIEEASGVLCKLLESGLVP----NAVTYNALIDGC---CNKG-------- 336
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+LD+ F +N+ V Y ++ LF + + D+
Sbjct: 337 ------------DLDKAFAYRDEMMNRGIVASVFTYNLLI---HALFLE--KRIEEAEDM 379
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ +R P++ I+ CG+ K+ ++++++ +N+ + + SL
Sbjct: 380 IKEMREKGV------EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++V + + E +K K G++ D+ +N L+ C+ GN A ++ E+ + A
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN--A 491
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K V D T++T+++ + + + A K+ ++M G+ P+ I++++LI+ + G ++
Sbjct: 492 KVV--PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
A+ +F+EML G +P N L+Q + + D A L R
Sbjct: 550 DALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + FGK+ + A + S K P++ + +ID G C + RA
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALID--GHCVNGNIDRA------ 481
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ K M V+ D ++N L++ C A
Sbjct: 482 -------------------------FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E+K +G+ K D +Y+T++ ++ + AL+V ++MLS G P +T+++
Sbjct: 517 KKLLDEMKE---RGI-KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPN 432
LI + G + A L EM G P+
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPD 601
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 181/437 (41%), Gaps = 55/437 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + +R F K + Y + SP++ + T +D G+ K RA++E+
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++ + ++ L++ V A + T E+Y M+ G + D +YN ++ C +G
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+K + V TY ++V A A + E+ S G+ N +
Sbjct: 496 VNKAYQLLEEMKTMGHHPT----VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+SSLI+ G V++A + EEM+Q G PN N LL V+A + + A F+S
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + TPN + TY
Sbjct: 612 ----------------------------KDLKCTPNQI-------------------TYC 624
Query: 520 ILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ C + + EM+ GL PN I++T +I SGNV A + + R
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS 684
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G PD +Y I+ + R A+ LFEE + + T + LL A + L +
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744
Query: 638 QQCLAVYQDMWKAGYKA 654
AV ++ K+ + A
Sbjct: 745 AIVGAVLRETAKSQHAA 761
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 205/498 (41%), Gaps = 63/498 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D+ + + + K L A+ ++ +++ P Y T+I G G + ++
Sbjct: 162 LVPD-DVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
++ E R++ ++ +N ++ K L +++ M++ M ++ +YNI++
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGM 279
Query: 334 CCLAGNTVLAQEIYGEVKHL-----------------------EAKGVLK--------LD 362
C AGN A ++ +K EA + + D
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
T+ +++ A ++ E ML A PN + ++SLI E +++
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RSWT-LSKTQVALG 469
EM+++GC P+ N + +A + ++ LF RS++ L + V G
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459
Query: 470 ------EDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFD--KRFSFKPTTTTYN 519
E Y D+ ++ + ++ + + N Y + K PT TY
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519
Query: 520 ILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ +A M E ++ G+ N + ++ LID G G V+ A +++ M +
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++P+V + + V+++ + +A F+ MK + PN +TY L+ + + +
Sbjct: 580 GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCK---VRKF 636
Query: 638 QQCLAVYQDMWKAGYKAN 655
+ +Q+M K G K N
Sbjct: 637 NKAFVFWQEMQKQGLKPN 654
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 197/480 (41%), Gaps = 53/480 (11%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L +R F ++ + +AL D K + ++ + ID G G + + ++
Sbjct: 98 LLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEM 157
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + + + S+M V A+ L +E+++ M++ + +YN ++ AG
Sbjct: 158 KANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKF 217
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
E Y ++ AKG + V Y+ I+ AL++ E+M PN T
Sbjct: 218 ---DEAYSLLERQRAKGCIP-SVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPT 272
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW- 459
++ +I AG VE A + + M +AG PN + NI++ +A + D A +F
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMD 332
Query: 460 ---------TLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKR 508
T LG+ G D + + D I PN V Y+S +
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQ--GRVDDAYRIYERMLDADQI---PNVVV---YTSLIRN 384
Query: 509 FSFK-----PTTTTYNILMKACCT-----------------DYYRVKALMNEMRTVGLSP 546
F FK Y +M++ C+ + + +AL E++ G P
Sbjct: 385 F-FKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP 443
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S++ILI + +G ++ M++ G D AY T I +S ++ +A+ L
Sbjct: 444 DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 503
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EEMK P +VTY +++ ++ L E ++++ G + N LI+ +
Sbjct: 504 EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYM---LFEEAKSNGIELNQVIYSSLIDGF 560
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 167/410 (40%), Gaps = 55/410 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC+ + GK+ + A R Y+ PN+ + ++I C +Y+++
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ + N+ M+ A + + +++ ++ G + D SY+IL+ + AG
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG--- 459
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+E Y ++ +G + LD Y+T++ F + A ++ E+M + G P +T+
Sbjct: 460 FARETYELYYAMKDQGCV-LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S+++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV------ 572
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
ME ++ +T P T+N L
Sbjct: 573 --------------------MEEMMQKGLT---------------------PNVYTWNCL 591
Query: 522 MKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ +AL+ M+ + +PN I++ ILI+ A + M++ G+
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGL 651
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
P+ + YT I +S + QA SLFE + P+ +Y ++ S
Sbjct: 652 KPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLS 701
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 35/370 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ MQ+LG ++ L++ G A + E+K D+ Y+
Sbjct: 81 LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK----SNTFDADIVLYNV 136
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ F MA K +M + G+ P+ +T++S++ A +++A+ +FE+M Q
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNR 196
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA-------LGEDYDGNTDR 478
P + N ++ A +FD A+ L R+ + VA LG+ G TD+
Sbjct: 197 QVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGK--KGKTDK 254
Query: 479 -ISNMEHKDKQSITNTPNF--------VPNSHYSSFDKRFSFK-----PTTTTYNILMKA 524
+ E + ++ N P + + ++F R + K P T NI++
Sbjct: 255 ALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDR 314
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + M SP+ ++ LID G G V+ A +I + M + P+
Sbjct: 315 LCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPN 374
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
VV YT+ I+ + R + +++EM P+L+ T + + G E ++ A
Sbjct: 375 VVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG---ETEKGRA 431
Query: 643 VYQDMWKAGY 652
+++++ G+
Sbjct: 432 LFEEIKARGF 441
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F F+P + Y L+ A + R+ AL N+M+ +G N T LI G V
Sbjct: 53 RHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRV 112
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + D+V Y I + ++ A+ F EMK + P+ VTY ++
Sbjct: 113 DAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSM 172
Query: 625 LRARSRYGSLHE 636
+ + L E
Sbjct: 173 MGVLCKANRLDE 184
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F PT T L+ +C ++A L+ MR P ++T LI A G +
Sbjct: 21 GFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRM 80
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + M+E G +V TT I+V R R+ A SL +EMK ++V Y +
Sbjct: 81 LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDC 140
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+G + +V + +M G +D ++ C+
Sbjct: 141 ---FGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY ++ ++ EM G P + + L+ +C S + A +L++MR P AYT
Sbjct: 8 DY--LEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I + +LF +M+ + N+ TL+R SR G V L++ +M
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREG---RVDAALSLLDEM 122
Query: 648 WKAGYKAN 655
+ A+
Sbjct: 123 KSNTFDAD 130
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 39/406 (9%)
Query: 294 FNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN+L+N +N LK L + ++ LG D SY L+ C G T A ++ +
Sbjct: 132 FNTLINGICLNG-KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQM---L 187
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E K ++ DV Y+ I+ K A ++ +M++ ++P+ +T++SLI
Sbjct: 188 KKIEGK-LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +++A LF EM+ P+ +IL+ A + RA K +A+
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA----------KNMLAVMM 296
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D ++ D + N N H S R P +YNI++
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVN--KAKHVFSTMSRLGVAPHAHSYNIMINGLG---- 350
Query: 531 RVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++K +L EM G++P+ +++ LID G + A Q++ M +G+ D++
Sbjct: 351 KIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADIL 410
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + I V ++ + +A +L +++K IQP++ TY L+ + G L Q V+
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD---VF 467
Query: 645 QDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVTLCRRTNS 689
QD+ GY N +I C EG+ N+ EV L + N+
Sbjct: 468 QDLLIKGYSVNAWTYNIMINGLCKEGLF-----NEAEVLLSKMENN 508
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 24/377 (6%)
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
RT+I+ G+C G+ + + + + + V ++ ++N ++N D + ++Y M
Sbjct: 168 RTLIN--GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEM 225
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ D+ ++N L+ C+ G +E +G + K + DV+T+S +V
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQL---KEAFGLFHEMVLKNI-NPDVYTFSILVDALCK 281
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + M+ GV P+ +T+SSL++ V +A H+F M + G P++
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHS 341
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
NI++ + D A LF+ K Y+ D + + I+
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMC-CKGIAPDTVTYNSLIDGLCKL-----GRISYAWQ 395
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
V H + TYN L+ C +++ + AL+ +++ G+ P+ ++ I
Sbjct: 396 LVDEMHNNGI------PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G ++ A + + + G S + Y I + +A L +M++
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509
Query: 614 IQPNLVTYITLLRARSR 630
I P+ VTY T++RA R
Sbjct: 510 IIPDAVTYETIIRALFR 526
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 22/353 (6%)
Query: 263 IDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKL 318
I + +C D S A +Y ++ ++ ++ ++ FNSL+ LK ++ M
Sbjct: 204 IIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK 263
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ D+ +++IL+ A C GN A+ + + +GV+ DV TYS+++ +
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAV---MMKQGVIP-DVVTYSSLMDGYCLVNE 319
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V M GV P+ +++ +IN +V++A+ LF+EM G P++ N
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ + + A++L + + Y+ D + H DK +I
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADI-LTYNSLIDVLCKNHHIDK-AIALVKKI-- 435
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
K +P+ TYNIL+ C + + ++ G S N ++ I+I+
Sbjct: 436 --------KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMIN 487
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
G A +L M +G+ PD V Y T I+ R ++A L EM
Sbjct: 488 GLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 158/374 (42%), Gaps = 27/374 (7%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH-LEAKGVL 359
N D+ + + M ++ + +N +L + A N I + H LE KG+
Sbjct: 34 NDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI--SLSHQLELKGIT 91
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ T++ +V + A + +L G P TIT+++LIN G +++A+H
Sbjct: 92 P-TIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH 150
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--WTLSKTQVALGEDYDGNTD 477
+ ++ G + L+ + + A ++ + L T V + +
Sbjct: 151 FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVM-------YN 203
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSS-FDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
I N KDK ++++ YS KR S P T+N L+ C
Sbjct: 204 IIINSLCKDK-AVSDAYQL-----YSEMITKRIS--PDVVTFNSLILGFCVVGQLKEAFG 255
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM ++P+ +++IL+DA GN+ A +L +M + G+ PDVV Y++ +
Sbjct: 256 LFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC 315
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ +A +F M + P+ +Y ++ G + V + L+++++M G
Sbjct: 316 LVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING---LGKIKMVDEALSLFKEMCCKGIAP 372
Query: 655 NDTYLKELIEEWCE 668
+ LI+ C+
Sbjct: 373 DTVTYNSLIDGLCK 386
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI------LMKACCTDYYRVKALMNEMRTVG 543
I + +F N+ SSF + +PT + ++KA Y +L +++ G
Sbjct: 30 IPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKG 89
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P +++ IL++ G + A I + + G P + + T I + +LK+A
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + + V+Y TL+ + G Q L
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 198/466 (42%), Gaps = 33/466 (7%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 146 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 205
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 206 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 265
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 266 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 321
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M+ G TP+ ++++I+ G +E A + M G +PN C N LL+
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRI-----SNMEHKD-KQSIT 491
A +++ L + L + D+ +G DR+ +EH IT
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 441
Query: 492 NTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
T D+ KP T +Y I++K C+ V A LM++M
Sbjct: 442 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +
Sbjct: 502 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 562 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 607
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 22/312 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 237
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 238 ----AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 293
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + L+ A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ M Y ++PN+V Y TLL+ E ++ LA +M+ +D L
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKDCPLDDVTFNIL 410
Query: 663 IEEWCEGVIQDK 674
++ +C+ + D+
Sbjct: 411 VDFFCQNGLVDR 422
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 161/397 (40%), Gaps = 30/397 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ L+ E+
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 412
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
N+ I+L+ A ++ A L + L+ ++ +
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532
Query: 487 KQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
KQ + N +P+ + YS T + L KA TD L+N M G+
Sbjct: 533 KQMLVNGCSPDLI---SYS------------TVIDGLGKAGKTD--EALELLNVMVNKGM 575
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN I ++ + A G + +Q+ +++ + D V Y I + ++A
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M PN TY L+R + G + E Q+ L
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 162/391 (41%), Gaps = 57/391 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+R+Q + L V N ++ V A +++ V+ M GV D +Y ++ C G
Sbjct: 786 DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 845
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A E+ +G + +D T + I+ F + A+ + G++PN
Sbjct: 846 NVLEADRWICEMME---RGFV-VDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNL 901
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I +SS+I+ G V+QA L EEM++ G +PN L+ + +RAFRLF
Sbjct: 902 INYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFL- 960
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + N+ PN H TY
Sbjct: 961 ------------------------------KLIRSDNYKPNVH---------------TY 975
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + R + L M+ GL PN ++T LID +GN A +++++M
Sbjct: 976 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G P+ Y + + + R ++AF L QI+ + VTY L+ + + +
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRA---D 1092
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ Q L M+K G++ + LI +C
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFC 1123
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 21/366 (5%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ C + +RA+ + + ++ N+ ++S+++ +K E+ + M K G
Sbjct: 873 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 932
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++ L+ C G T A ++ +K + + K +V TY+ ++ + +
Sbjct: 933 KPNVYTHTSLIHGLCKKGWTERAFRLF--LKLIRSDN-YKPNVHTYTAMISGYCKEEKLS 989
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M G+ PNT T+++LI+ AG +A L E M G PN+ N ++
Sbjct: 990 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + AF+L + ++ + DG T I E + + F+ N
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQNQIEA------DGVTYTILISEQCKRADMNQALVFL-NK 1102
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ + F+P Y L+ A C + L +E+ +GL+P ++T +I
Sbjct: 1103 MF-----KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 1157
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A++ + M + G +PD ++Y I + RL +A L++ M + P
Sbjct: 1158 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 1217
Query: 619 VTYITL 624
VT +TL
Sbjct: 1218 VTRVTL 1223
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN++ +I G C + SRA ++E ++ Q + N + +L++ A +
Sbjct: 970 PNVHTYTAMIS--GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 1027
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY--GEVKHLEAKGV--------- 358
E+ + M G + +YN ++ C G A ++ G +EA GV
Sbjct: 1028 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087
Query: 359 --------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ D+ Y+T++ F + + K+ ++++ G+ P
Sbjct: 1088 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++S+I V A+ F++M GC P+S L+ + + D A +L+
Sbjct: 1148 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 194/424 (45%), Gaps = 47/424 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P++ +++D G+C D RA + +++ + V + + F++L+ NA +
Sbjct: 78 APDVVTYTSVVD--GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++YK + D S + L+ C A E++ E++ E G K DV TY+
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE-DGAWKPDVVTYTA 194
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + A+K+ M PN +T+SSL++ AG ++QA+ LF M G
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEH- 484
C PN L+ A + D A L T + V+ DG R+ +E
Sbjct: 255 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC-RLGRIEEA 313
Query: 485 ----KDKQSITNTPNFVPNS-------HYSSFDK-RF---------SFKPTTTTYNILMK 523
K+ + + P+ + + + S ++ RF P TY+I++
Sbjct: 314 KQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 373
Query: 524 ACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y R K + EM ++PN ++++ LID +G V A+++LK + +
Sbjct: 374 G----YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PDVV YT I+ + R ++A +L EEM + +++P++ T+ +++ A R G + E
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485
Query: 638 QQCL 641
+ L
Sbjct: 486 WKLL 489
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 144/322 (44%), Gaps = 25/322 (7%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+++ C A T A E+ E++ + K V D+ TYST++ F A ++
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMR--DGKSVAP-DLVTYSTVINGFCKQGEMDRACEI 67
Query: 386 KEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+M++ G+ P+ +T++S+++ G +++A + EM G EP+ + L+
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
A + D A +L++ S ++ D ++ I+ + + + Y
Sbjct: 128 NARKVDEALKLYKEILTSSCRL----DAVSSSALITGLCRERRI----------GEAYEL 173
Query: 505 FD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
F + ++KP TY L+ C KA ++ M PN ++++ L+
Sbjct: 174 FQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 233
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+++ AL + + M G P+VV YTT I + ++ A L +EM +
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
V+Y LL R G + E +Q
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQ 315
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 192/472 (40%), Gaps = 88/472 (18%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
EL +E + + KPDV + + + F K +L A++ +
Sbjct: 172 ELFQEMEMREDGAWKPDV--------------VTYTALIDGFCKSGNLEKAMKMLGVMEG 217
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ +++ G+C GD ++ ++ + S+ N+ + +L++ AH +
Sbjct: 218 RKCVPNVVTYSSLLH--GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ M AD SYN LL C G A++++ K + AK L D T
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF---KEMAAKSCLP-DRIT 331
Query: 366 YSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+ +V+ F +A + A + E+M +AG+ P+ +T+S ++ + A +A +EM
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ PN+ + L+ +A + + A + + N D
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK-----------------NVD------- 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
KP TY I+++ C +AL + EM
Sbjct: 428 ---------------------------KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ ++ +I A G+++ A ++L M G+ P +V YTT ++ R+ R++ A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Query: 603 FSLFEEM----KHYQIQPNLV---TYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ LFE M K NLV + L+R + E+ + +AV +++
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKA---REIDKAMAVVEEL 569
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 132/335 (39%), Gaps = 53/335 (15%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ +V A+ A +V ++M V P+ +T+S++IN G +++A + E
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 424 ML-QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M+ + G P+ ++ T V G DG DR M
Sbjct: 71 MVTRDGMAPD---------------------------VVTYTSVVDGLCRDGKMDRACEM 103
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN-ILMKACCTDYYRVKALMN---- 537
+ K F ++ + + Y IL +C D AL+
Sbjct: 104 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCR 163
Query: 538 --------------EMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
EMR G P+ +++T LID SGN+E A+++L +M P+
Sbjct: 164 ERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 223
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
VV Y++ + ++ L QA LF M PN+VTY TL+ + H+V
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG---LCAAHKVDAARL 280
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ +M A+ L++ +C G I++ Q
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 50/272 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M V + +Y+ L+ C AG A E+ K V K DV TY+ +
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL--------KNVDKPDVVTYTIV 437
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + AL + E+M++ V P+ T++S+I A G +++A L M G
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP LL+ + + A+ LF M K K+S
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEV-----------------------MRRKAKKS 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
++ N VP +S+ L++ C + + A++ E+R+ P
Sbjct: 535 -SSAANLVPEQAFSA----------------LIRGLCKAREIDKAMAVVEELRSRECEPA 577
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGM 579
++D +G E A +++ + + G+
Sbjct: 578 EEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 162/367 (44%), Gaps = 37/367 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M + GV ++ +YNIL++ C AGN + +GE +E G L +V TY+TI+
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGE---MERNGCLP-NVVTYNTII 245
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A K+ M G+ PN I+++ +IN G +++ + EEM +
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYD-----GNTDRISNM 482
P+ N L+ F +A L LS V + GN +R M
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA--M 363
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
E D+ + P TY L+ + +A +M EM
Sbjct: 364 EFLDQM------------------RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P I++ LI+ G +E A +L+ M E G PDVV+Y+T I R++ L+
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+AF L EM I P++ TY +L++ + L EV C ++Q+M G ++
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEV--C-DLFQEMLSLGLPPDEVTYT 522
Query: 661 ELIEEWC 667
LI +C
Sbjct: 523 SLINAYC 529
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 198/449 (44%), Gaps = 55/449 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SPN+Y +I G+ + ++ N+ +N++++ L+ E +
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC-KLRKIGEAF 258
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K ++ + G+ ++ SYN+++ C G EI E+ +K D T++T+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----SKRRYVPDRVTFNTL 314
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + AL + +M+ G++PN +T+++LIN+ AG + +AM ++M G
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN--TDRISNMEH 484
PN + L+ + +A+++ + + T + +G+ R+ +
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 485 KDKQSITNTPNFVPNS-HYSS----------FDKRFSFK---------PTTTTYNILMKA 524
++ I F+P+ YS+ +K F K P TY+ L++
Sbjct: 435 LLQEMIER--GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C V L EM ++GL P+ +++T LI+A G+++ AL++ M + G SPD
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---------------ITLLRA 627
+V Y I + R K+A L ++ + + PN +TY + L++
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
G ++E + L + M + GYK N+
Sbjct: 613 FCMKGLMNEADRVL---ESMLQKGYKLNE 638
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 18/308 (5%)
Query: 363 VFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
V +Y+ I+ V + ++A + ++M+ +GV+PN T++ LI AG +E + F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + GC PN N ++ A + + AF+L R L L + I+
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK----GLNPNLISYNVVING 282
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + T+ KR + P T+N L+ C ++++ L EM
Sbjct: 283 LCREGQMKETSEI-------LEEMSKR-RYVPDRVTFNTLINGYCNVGNFHQALVLHAEM 334
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GLSPN +++T LI++ +GN+ A++ L MR+ G+ P+ YTT I + L
Sbjct: 335 VKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFL 394
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
KQA+ + +EM P ++TY L+ G + + L Q+M + G+ +
Sbjct: 395 KQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL---QEMIERGFIPDVVSY 451
Query: 660 KELIEEWC 667
+I +C
Sbjct: 452 STIISGFC 459
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 54/375 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K +L A+ D + PN T+ID G ++ I ++
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ T I +N+L +N H + +E + + M + G + D+ SY+ ++ C
Sbjct: 404 MVENGFTPTIITYNAL--INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-- 459
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L + +V+ + AKG+ DV TYS++++ + + ++MLS G+ P+
Sbjct: 460 RNQELEKAFQLKVE-MVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SLINA G +++A+ L +EM+Q G P+ N+L+ + + A RL
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + V Y+ D +N+E K +
Sbjct: 578 KL-LYEESVPNEITYNTLIDNCNNLEFKSALA---------------------------- 608
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LMK C +K LMNE M G N + ++I GN+E A +
Sbjct: 609 ---LMKGFC-----MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
Query: 571 LKIMREDGMSPDVVA 585
K M G +P V
Sbjct: 661 YKEMLHSGFAPHSVT 675
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K + F P +YN ++ A VK + EM G+SPN ++ ILI +GN
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E L M +G P+VV Y T I + +++ +AF L M + PNL++Y
Sbjct: 219 LEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ R G + E + L ++M K Y + LI +C
Sbjct: 279 VINGLCREGQMKETSEIL---EEMSKRRYVPDRVTFNTLINGYC 319
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++ CT L EM G PN +++ +IDA + A ++
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L++M G++P++++Y I R ++K+ + EEM + P+ VT+ TL+
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
G+ H Q L ++ +M K G N LI C+
Sbjct: 321 VGNFH---QALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 194/445 (43%), Gaps = 39/445 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+++ +ID GD SR ++ +R ++ ++ +NSL++ L+
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 345
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ +G + D+ +YN L+ C A E + E+K+ LK +V TYST++
Sbjct: 346 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN----NGLKPNVVTYSTLI 401
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F Q A+K+ DM G+ PN T++SLI+A AG + +A L +MLQAG +
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQ---VALGEDYDGNTDRISNMEH 484
N LL +A + A +FRS +S Q AL Y +R+ +
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMK 520
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQ + KP Y ++ C+ K ++ EM++
Sbjct: 521 ILKQM-----------------TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+S N + T +IDA +G AL + M++ G+ +V Y I ++ ++ A
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA 623
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F M +QPN+ Y +L+ + + ++ ++ +M G + T L
Sbjct: 624 VDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK---LFDEMQCRGMTPDITAFTAL 680
Query: 663 IEEWCEGVIQDKNQNQGEVTLCRRT 687
I +G ++ N + V + R T
Sbjct: 681 I----DGNLKHGNLQEALVLISRMT 701
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 209/467 (44%), Gaps = 46/467 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL ++ R + ++ SP++ ++ID G G + +++ +++ +I
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N + E + M+ G+ ++ +Y+ L+ A C G A +++ ++
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G+L + FTY++++ A A K+ DML AGV N +T+++L++
Sbjct: 421 RR---TGLLP-NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVA 467
AG + +A +F ML+ G PN Q L+ ++A + + A ++ + T + +
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536
Query: 468 LGEDYDGNTDRIS------NMEHKDKQSITNTP---NFVPNSHY---SSFDKRFSFK--- 512
G G+ + +E + I+ P + ++++ S D F+
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 513 -----PTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
T TY +L+ C DY+ M ++GL PN +T LID
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYF------CRMLSLGLQPNVAVYTSLIDGLC 650
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ +E A ++ M+ GM+PD+ A+T I ++ L++A L M I+ +L
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
Y +L+ S+ G LH+ ++ + +M + G + L+ E+
Sbjct: 711 VYTSLVSGFSQCGELHQARK---FFNEMIEKGILPEEVLCICLLREY 754
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 52/289 (17%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q+ K DM+ AG+ P+ T++ +I+ G +E + LF +M + G P+ N L
Sbjct: 271 QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 330
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + + LF E KD +
Sbjct: 331 IDGYGKVGSLEEVASLFN-------------------------EMKDVGCV--------- 356
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
P TYN L+ C +A +EM+ GL PN ++++ LIDA
Sbjct: 357 -------------PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G ++GA+++ MR G+ P+ YT+ I ++ L +A+ L +M ++ N
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+VTY LL + G + E ++ V++ M K G N L+ +
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEE---VFRSMLKDGISPNQQVYTALVHGY 509
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 165/419 (39%), Gaps = 55/419 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K+ + A++ + ++ PN + ++ID G+ ++ + D
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V LNI + +L++ A + EV+++M K G+ + Y L+ A
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +I ++ +K D+ Y +I+ + + + E+M S G++ N +
Sbjct: 515 MEDAMKILKQMTECN----IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 570
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++I+A AG A++ F+EM G E +L+ +A + A F
Sbjct: 571 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF--- 627
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++LG +P Y
Sbjct: 628 ---CRMLSLG-----------------------------------------LQPNVAVYT 643
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + K L +EM+ G++P+ ++T LID GN++ AL ++ M E
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 703
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ D+ YT+ + + L QA F EM I P V I LLR + G L E
Sbjct: 704 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 762
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I E+++S+ ++ N + ++++ A L ++ MQ +GV A + +Y +L+
Sbjct: 552 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 611
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG LA + + + L L+ +V Y++++ + A K+ ++M
Sbjct: 612 DGLCKAGIVELAVDYFCRMLSLG----LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667
Query: 392 AGVTPNTI-----------------------------------TWSSLINACANAGLVEQ 416
G+TP+ ++SL++ + G + Q
Sbjct: 668 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 727
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
A F EM++ G P C LL+ + Q D A L
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 51/375 (13%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M G + + +Y LL++ C A A+ ++ + + A+G +VF+YS ++
Sbjct: 40 YNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF---RGMAAQGC-SPNVFSYSILIA 95
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ +M+ G PN +T+ SL++ G +++A+ LF M+ GC P
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N+L+ + A+RLF E +K I
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFE-------------------------EMLEKGCIP 190
Query: 492 NTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKACC--TDYYRVKA 534
F NS S F ++ F P T+N L+ C D
Sbjct: 191 TV--FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EMR++G P+ +S+ LI G A ++L+ M G+ PD+V+Y I
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+S L A LF E+ ++P+ +Y T++ R G +V V++DM G
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG---KVGAAFVVFKDMIANGSAP 365
Query: 655 NDTYLKELIEEWCEG 669
+ + L+ C G
Sbjct: 366 DAAVVIPLVIGLCRG 380
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 43/382 (11%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
Y D+ + N Y + L+ A + V++ M G ++ SY+IL+
Sbjct: 38 GTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGL 97
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A E+ E+ G + +V TY +++ + A+ + M+ G
Sbjct: 98 CRGQKVDEAAELLNEM----IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + ++ LI+ + G + +A LFEEML+ GC P N LL +F R
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM-----EHK---DKQSITNTPNFVPNSHYSSFD 506
LF+ L + V ++ D M H+ + +S+ P+ V Y++
Sbjct: 214 LFKDM-LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV---SYNTLI 269
Query: 507 K-------------------RFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVG 543
+ R P +YNIL+ K+ D+ L E+ G
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH--AIKLFYEIPKSG 327
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ S++ +ID +G V A + K M +G +PD + R +RL ++
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 604 SLFEEMKHYQIQPNLVTYITLL 625
LF+ M ++ P + Y L+
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLM 409
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +++ + F KK D+ A R ++ + P ++ +++ G++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ Q NI+ FN+L++ D+ ++ M+ LG D+ SYN L++ C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G AQ + ++ + GV D+ +Y+ ++ ++ + A+K+ ++ +G+
Sbjct: 274 SKGKPHEAQRL---LREMIRSGV-GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P+ ++S++I+ AG V A +F++M+ G P++ +++ + C+ +R
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA---VVIPLVIGLCRGER 382
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++++ L+ A +G + + +ML AGC PN+ LL++ +A +F+ A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R P
Sbjct: 76 RGMAAQGCS-----------------------------------------------PNVF 88
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+Y+IL+ C +A L+NEM G PN +++ L+ G ++ A+ + M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G PD V Y I + + +A+ LFEEM P + TY +LL SR G
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
VQ ++++DM + G N L++ +C+
Sbjct: 209 GRVQ---SLFKDMLRQGCVPNIFTFNNLLDGFCK 239
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 197/466 (42%), Gaps = 33/466 (7%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 109 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 168
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 228
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 284
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M+ G TP+ ++++I+ G +E A + M G +PN C N LL+
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFV 497
A +++ L + L + D+ +G DR+ + + +
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVIT 404
Query: 498 PNSHYSSFDKR---------------FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
+ + F K KP T +Y I++K C+ V A LM++M
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 570
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 22/312 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 200
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 201 ----AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + L+ A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ M Y ++PN+V Y TLL+ E ++ LA +M+ +D L
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKDCPLDDVTFNIL 373
Query: 663 IEEWCEGVIQDK 674
++ +C+ + D+
Sbjct: 374 VDFFCQNGLVDR 385
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 161/397 (40%), Gaps = 30/397 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ L+ E+
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 319
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 375
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 376 FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
N+ I+L+ A ++ A L + L+ ++ +
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495
Query: 487 KQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
KQ + N +P+ + YS T + L KA TD L+N M G+
Sbjct: 496 KQMLVNGCSPDLI---SYS------------TVIDGLGKAGKTD--EALELLNVMVNKGM 538
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN I ++ + A G + +Q+ +++ + D V Y I + ++A
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M PN TY L+R + G + E Q+ L
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 132/361 (36%), Gaps = 67/361 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ C AG A+ + V + + +TY +V+ AL V
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP-------VPPNAYTYFPVVRALCARGRIADALAVL 145
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++M G P + ++ A G A+ + E++ GC + CN++L A +
Sbjct: 146 DEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ 205
Query: 447 CQFDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEH--KDKQSITNTPNFVP- 498
D A L R S+ V+ G R ++ ++ + PN V
Sbjct: 206 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265
Query: 499 NSHYSSFDKRFSFK---------------PTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
N+ S + F+ P Y ++ C + + A ++N M +
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325
Query: 542 VGLSPN-----------------------------------HISWTILIDACGGSGNVEG 566
GL PN +++ IL+D +G V+
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+++L+ M E G PDV+ YTT I + + +A L + M +PN ++Y +L+
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 627 A 627
Sbjct: 446 G 446
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 208/484 (42%), Gaps = 47/484 (9%)
Query: 207 VNLAIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTI 262
V A R A VP + F VR + + AL D S+ + P MY I
Sbjct: 100 VEAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMY--HVI 157
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
I+ G Y + + E L ++ TL+ N ++N + + LE+ + + G
Sbjct: 158 IESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGC 217
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLE------AKGVLKLDVFTYSTIVKVFA 374
AD+ SYN +LK C A +E+ E+ + A+ D+ Y+TI+
Sbjct: 218 EADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGIC 277
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++A ++ M S G+ PN + +++++ +A E+A L EM Q C +
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337
Query: 435 CCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKD 486
NIL+ + DR L ++ T V G +G D +
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML---- 393
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
+ N P+ KP T +Y I++K C+ V A LM+ M G
Sbjct: 394 ---LKNMPS-------------CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +++ +I+ G VE A+++LK M +G +PD+++Y+T I ++ + ++A
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L M + I PN++TY ++ A +R G + +V Q ++ ++ A +++ +I
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ---MFDNIQDATIRSDAVLYNAVIS 554
Query: 665 EWCE 668
C+
Sbjct: 555 SLCK 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 145/358 (40%), Gaps = 40/358 (11%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+++ C+AG T A V+ L+A G V Y+ +V + + A ++
Sbjct: 58 LIRSLCVAGRTADA------VRALDAAGNAA-GVVDYNAMVAGYCRVGQVEAARRLAA-- 108
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ V PN T+ ++ G + A+ + +EM C P ++++++ + +
Sbjct: 109 -AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167
Query: 450 DRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R+ + A G D GN + + N +I +
Sbjct: 168 SSALRVLEALH------AKGSTLDTGNCNLVIN-------AICDQGCVDEGLEMLRKLPL 214
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV----------GLSPNHISWTILID 556
F + +YN ++K C + V+ LM+EM V G +P+ + +ID
Sbjct: 215 FGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIID 274
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G+ E A +IL M G+ P+VV Y T +K + R ++A L EM
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL 334
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ VT+ L+ + G + V + L + M + G + +I +C EG+I +
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELL---EQMLEHGCMPDVITYTTVINGFCKEGLIDE 389
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 185/404 (45%), Gaps = 27/404 (6%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + GD K ++E + + ++ + L+N+ A K + LEV K M
Sbjct: 55 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 114
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ ++ K +K DV Y+ I+ F
Sbjct: 115 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL----IKDGIKPDVVLYNNIITAFCG 170
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ ++M P T T+ +I+ A G +++A+ +F+ M +GC P
Sbjct: 171 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 230
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + ++A ++ TL+ N + + H S+ +T
Sbjct: 231 YNALILGLVEKRKMEKAEQILDEMTLAGVSP--------NEHTYTTIMH-GYASLGDT-- 279
Query: 496 FVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
++ F K + TY L+KACC AL EM + N +
Sbjct: 280 ---GKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIY 336
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILID G+V A +++ M+ +G+ PD+ YT+ I C ++ +++A EEMK
Sbjct: 337 NILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 396
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL+ +R SL E + L+ +++M +G K +
Sbjct: 397 VGVKPNVKTYTTLINGWAR-ASLPE--KALSCFEEMKLSGLKPD 437
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 184/476 (38%), Gaps = 95/476 (19%)
Query: 239 SALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
SA + +K+ SS N I II C C + K+ A+ ++ + + I +++++
Sbjct: 1 SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRC-NMDKAEALVREMEEEGIDAPIDIYHTM 59
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
M+ D L V++ ++ G+ + +Y L+ G A E+ E++H
Sbjct: 60 MDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGI 119
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +K TYS ++ F K W A + ED++ G+ P+ + ++++I A G ++
Sbjct: 120 KHNMK----TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMD 175
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A+ +EM + +P ++ ++ + +A +F +S
Sbjct: 176 RAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMS------------- 222
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
PT TYN L+ KA
Sbjct: 223 ----------------------------------GCIPTVHTYNALILGLVEKRKMEKAE 248
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+++EM G+SPN ++T ++ G+ A +R++G+ DV Y +K C
Sbjct: 249 QILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKAC 308
Query: 594 VRSKRLKQAFS-----------------------------------LFEEMKHYQIQPNL 618
+S R++ A + L ++MK +QP++
Sbjct: 309 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDI 368
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
TY + + A S+ G ++Q+ ++M G K N LI W + +K
Sbjct: 369 HTYTSFINACSKAG---DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEK 421
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A + D SPN + TI+ GD K+ A + LR + + L++Y
Sbjct: 240 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVY 299
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 300 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL---M 356
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ +GV + D+ TY++ + + A Q A K E+M S GV PN T+++LIN A
Sbjct: 357 QQMKREGV-QPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A L E+A+ FEEM +G +P+ + L+ +
Sbjct: 416 ASLPEKALSCFEEMKLSGLKPDRAVYHCLMTS 447
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F +K ++ AL +D + P ++ +I K+ I +++
Sbjct: 196 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+ N + + ++M+ A D + ++ G+ D+ +Y LLKACC +G
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRM- 314
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 315 --QSALAVTKEMSAQNIPR-NTFIYNILIDGWARRGDVWEAA-DLMQQMKREGVQPDIHT 370
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S INAC+ AG +++A EEM G +PN + L+ A ++A F
Sbjct: 371 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 430
Query: 461 LS 462
LS
Sbjct: 431 LS 432
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F + A+ +K P II G+ K+ +++
Sbjct: 159 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 218
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V ++ ++ M GV + +Y ++ G+
Sbjct: 219 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGD 278
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + L +G L+LDV+TY ++K + Q AL V ++M + + NT
Sbjct: 279 TGKA---FAYFTKLRDEG-LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 334
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G V +A L ++M + G +P+ + AC +A RA +
Sbjct: 335 IYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 389
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+PR ++ + + ++ D+ A K+ P+++ + I+ C GD ++
Sbjct: 329 IPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT 388
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
E+++S V N+ + +L+N A + L ++ M+ G+ D A Y+ L+
Sbjct: 389 KTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 445
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 181/395 (45%), Gaps = 27/395 (6%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDL 305
SPN+ T+I+ G+C G K+ + +D++ N+ +N+L++ +
Sbjct: 227 SPNLITFNTVIN--GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ K M + V + ++N+L+ C N A +++ E ++++G LK V T
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE---MQSQG-LKPTVVT 340
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+++V + A + ++MLS+ + PN IT+++LIN L+E+A LF+ +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN N LL + + + AF L + L K + Y N +
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTY--NCLIVGFCREG 457
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+ + N N + + K T TYNIL+ A C KA L++EM G
Sbjct: 458 KMEEVKNLLNEM---------QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+H+++ IL++ GN+ AL + K M ++G +VV Y I+ R +L+ A
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
L EM + PN TY + G L +++
Sbjct: 569 GLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 176/417 (42%), Gaps = 53/417 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + ++ N+ FN+++N L +V +M+ G ++ +YN L+ C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +K + V V T++ ++ F + ALKV E+M S G+
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSV-TFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++SL+N N G + +A L +EML + +PN N L+ + + A L
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS----HYSSFDK---- 507
F D I KQ +T PN + + Y F K
Sbjct: 396 F--------------------DNIG------KQGLT--PNVITFNTLLHGYCKFGKMEEA 427
Query: 508 --------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
F P +TYN L+ C + VK L+NEM+ G+ + +++ ILI A
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISA 487
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A +++ M + G+ P + Y + L+ A +L ++M+ N
Sbjct: 488 WCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWAN 547
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+VTY L++ R G L + L +M + G N T + + EE E G + D
Sbjct: 548 VVTYNVLIQGYCRKGKLEDANGLL---NEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%)
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G + K M +SP+++ + T I + +L +A + ++MK + PN+VTY TL+
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G + ++ + A+ ++M + N LI+ +C+
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 181/440 (41%), Gaps = 61/440 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++S+ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKAGYKA 654
+ AV ++ KA + A
Sbjct: 849 EQAAIVGAVLRETGKARHAA 868
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/546 (20%), Positives = 228/546 (41%), Gaps = 59/546 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
++ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + RL +A+ LFEE K +I+ N+V Y +L+ +G + + + + +++ +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG---FGKVGRIDEAYLILEELMQ 685
Query: 650 AGYKAN 655
G N
Sbjct: 686 KGLTPN 691
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 175/403 (43%), Gaps = 35/403 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+++ ++ N+ +N L+++ A L E+ +MQK G+ ++ + NI++ C
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ A I+ ++ + V D T+ +++ A K+ E ML +
Sbjct: 424 KSQKLDEACAIFEQMDY----KVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N+I ++SLI N G E ++++M+ C P+ Q N + +A + ++ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV------ 497
F RS+++ + + + +M+ + T N V
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 498 ---PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHIS 550
N Y + K F+PT TY ++ +A M E ++ + N +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G G ++ A IL+ + + G++P+V + + + V+++ + +A F+ MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ PN VTY L+ + + + + +Q+M K G K
Sbjct: 720 ELKCTPNQVTYGILINGLCK---VRKFNKAFVFWQEMQKQGMK 759
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALRVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++L +A ++FE+M + P+ +T+ +L+ + G V +Y+ M + + N
Sbjct: 426 QKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKIYEKMLDSDCRTNS 482
Query: 657 TYLKELIEEW 666
LI+ +
Sbjct: 483 IVYTSLIKNF 492
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNVYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ +CV+A + F + ++ K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 170/406 (41%), Gaps = 58/406 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+R+Q + L V N ++ V A +++ V+ M GV D +Y ++ C G
Sbjct: 199 DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 258
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A E+ +G + +D T + I+ F + A+ + G++PN
Sbjct: 259 NVLEADRWICEMME---RGFV-VDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNL 314
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I +SS+I+ G V+QA L EEM++ G +PN L+ + +RAFRLF
Sbjct: 315 INYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF-- 372
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + N+ PN H TY
Sbjct: 373 -----------------------------LKLIRSDNYKPNVH---------------TY 388
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + R + L M+ GL PN ++T LID +GN A +++++M
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G P+ Y + + + R ++AF L QI+ + VTY L+ + + +
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRA---D 505
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
+ Q L M+K G++ + LI +C + +++D + EV
Sbjct: 506 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 21/366 (5%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ C + +RA+ + + ++ N+ ++S+++ +K E+ + M K G
Sbjct: 286 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 345
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++ L+ C G T A ++ +K + + K +V TY+ ++ + +
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLF--LKLIRSDNY-KPNVHTYTAMISGYCKEEKLS 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M G+ PNT T+++LI+ AG +A L E M G PN+ N ++
Sbjct: 403 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + AF+L + ++ + DG T I E + + F+ N
Sbjct: 463 DGLCKRGRAEEAFKLLNTGFQNQIEA------DGVTYTILISEQCKRADMNQALVFL-NK 515
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ + F+P Y L+ A C + L +E+ +GL+P ++T +I
Sbjct: 516 MF-----KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 570
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A++ + M + G +PD ++Y I + RL +A L++ M + P
Sbjct: 571 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 630
Query: 619 VTYITL 624
VT +TL
Sbjct: 631 VTRVTL 636
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 49/273 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN++ +I G C + SRA ++E ++ Q + N + +L++ A +
Sbjct: 383 PNVHTYTAMIS--GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-----GEVKHLEAKGV------ 358
E+ + M G + +YN ++ C G A+E + G +EA GV
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGR---AEEAFKLLNTGFQNQIEADGVTYTILI 497
Query: 359 -----------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ D+ Y+T++ F + + K+ ++++ G+
Sbjct: 498 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLA 557
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P T++S+I V A+ F++M GC P+S L+ + + D A +L
Sbjct: 558 PTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 617
Query: 456 FRSWT---LSK---TQVALGEDYDGNTDRISNM 482
+ + LS T+V L +Y D S M
Sbjct: 618 YDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 650
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDG 323
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 35/393 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +++ Y S + ++ L +Y M ++ K +
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSMRESNVKPD 397
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 24/328 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV ++ +YN LL A G A I+ +K K L+ D+ +Y++++ + +
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIK----KNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A +V M PN +++++LI+A +AG++++A+ L EM + G +P+ +
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
LL AC Q R + RS + VA N+ S + D +
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAY------NSGIKSYLSFGDYEKALEL-- 385
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y+S + + KP TYNIL+ Y +M +S ++
Sbjct: 386 ------YTSM-RESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + G + A M++ G PDV+ YTT I+ K+A+ LF+EM+
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I P+ + +L+ A ++ G V Q +
Sbjct: 499 IPPDAIICSSLMEAFNKGGEPERVLQLM 526
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/441 (19%), Positives = 179/441 (40%), Gaps = 60/441 (13%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L + ME KD +
Sbjct: 313 VGL-----------------------LHEME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
MRE + PD V Y I + + ++ FE+M ++ Y +L+ + +
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIK 445
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G L E + + + M K+G
Sbjct: 446 QGKLSEAE---STFSSMKKSG 463
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 165/393 (41%), Gaps = 55/393 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ +I+ I G +AI++ + ++ V NI +NSL+ A + L +
Sbjct: 186 PDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAI 245
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++K G+ D+ SY LL A + A+E++ ++K K K + +Y+ ++
Sbjct: 246 FNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK----KNSCKPNKVSYNALID 301
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA---------------------- 409
+ A + A+ + +M G+ P+ ++ S+L+ AC
Sbjct: 302 AYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Query: 410 -----NAGL--------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+G+ E+A+ L+ M ++ +P++ NIL+ + ++ + R F
Sbjct: 362 NTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFF 421
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + E Y + I + + K S S +SS K F P
Sbjct: 422 EDMVDSKVS-STKEVY---SSLIYSYIKQGKLS-------EAESTFSSMKKSGCF-PDVL 469
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L++A + R L EM G+ P+ I + L++A G E LQ+++ M
Sbjct: 470 TYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFM 529
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + + +Y I C + K A + E
Sbjct: 530 KKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 562
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGN--------------------TVLAQEIYGEVK 351
Y +M++ V D +YNIL+ G V + IY +K
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIK 445
Query: 352 H------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ G DV TY+T+++ + W+ A + ++M G+ P+ I
Sbjct: 446 QGKLSEAESTFSSMKKSGCFP-DVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAI 504
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
SSL+ A G E+ + L E M + N + ++ +C + A +
Sbjct: 505 ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYL 564
Query: 460 TLSKTQVALG 469
S + +++G
Sbjct: 565 DSSLSSISVG 574
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 197/440 (44%), Gaps = 27/440 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P + F + F + A+ +D KK P+++ ++D G+C GD +
Sbjct: 280 PCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVD--GLCKQGDVLTG 337
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ +T N+ ++SL++ A ++ E++K ++ G D Y+I+L
Sbjct: 338 YYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
CC + + +++ ++ H D + YS+++ + + + AL+V E M+S G
Sbjct: 398 CCQHLDLEICYDLWNDMVHHN----FVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDG 453
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN +T + L++ +N GL+ +A +++ Q G P+ +++ C+ ++
Sbjct: 454 ICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHG---LCKVNKPN 510
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ W + + G Y +T S + +++ F +Y D+ KP
Sbjct: 511 DM---WGIFADMIKRG--YVPDTVLYSIIIDGFVKALDLQEAF--RLYYKMVDE--GTKP 561
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ C D V L M GL+P+ I +T LI N++ AL+I
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIF 621
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M +G+S D YT I + + A EEM + + P +VTY L+ +
Sbjct: 622 REMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKI 681
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + ++ +A+Y M +AG
Sbjct: 682 G---DEKKAMAMYNSMLQAG 698
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 161/397 (40%), Gaps = 61/397 (15%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYN 328
M +R++++D++S + N+Y ++ LM++ H K LE + GV + A+Y
Sbjct: 193 MYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYA 252
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L C A + + ++ L +G + + ++ ++ F A++V +
Sbjct: 253 TYLYGLCHAKQV---KSAWNFLQMLCQRG-YPCNNYCFNAVIHGFCHDGQVHKAIEVFDG 308
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G P+ ++S L++ G V ++ EM + G PN + LL A +
Sbjct: 309 MKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGR 368
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ AF LF+ KD+
Sbjct: 369 VELAFELFKRL-------------------------KDQ--------------------- 382
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
FK Y+I++ CC D L N+M P+ +++ LI A ++
Sbjct: 383 -GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++ ++M DG+ P+VV T + + +AF ++++ + + P+L TY ++
Sbjct: 442 ALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIH 501
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +++ ++ DM K GY DT L +I
Sbjct: 502 GLCK---VNKPNDMWGIFADMIKRGY-VPDTVLYSII 534
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 168/421 (39%), Gaps = 83/421 (19%)
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N Y FN++++ HD + +EV+ M+K G + D+ SY+IL+ C G
Sbjct: 282 NNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQG--------- 332
Query: 348 GEVKHLEAKGVLKLDVFT-YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
DV T Y +V +M G+TPN +++SSL++
Sbjct: 333 --------------DVLTGYYMLV-----------------EMARNGITPNLVSYSSLLH 361
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG VE A LF+ + G + + +I+L C + + + L W
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDL---WNDMVHHN 418
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNT----------PNFVP--------------NSHY 502
+ + Y+ ++ + H+ + PN V +
Sbjct: 419 FVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAF 478
Query: 503 SSFDK--RFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILI 555
DK +F P+ TY +++ C D + + A +M G P+ + ++I+I
Sbjct: 479 LFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFA---DMIKRGYVPDTVLYSIII 535
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D + +++ A ++ M ++G P++ YT+ I +L + +LF+ M +
Sbjct: 536 DGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLA 595
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
P+ + Y +L+ Y ++ L ++++M G A+ LI + + + D
Sbjct: 596 PDRILYTSLIAC---YCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652
Query: 676 Q 676
Q
Sbjct: 653 Q 653
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ + IID D ++ +Y + + NI+ + SL+N HD K + +
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTL 585
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K+M G+ D Y L+ C N A EI+ E +E +G L D F Y+ ++
Sbjct: 586 FKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFRE---METEG-LSADSFVYTCLIG 641
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ A E+M++ G+TP +T++ LI G ++AM ++ MLQAG P
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701
Query: 432 NSQCCNIL 439
+++ IL
Sbjct: 702 DAKLSCIL 709
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGAL 568
+P TY + C +VK+ N ++ + G N+ + +I G V A+
Sbjct: 245 RPNAATYATYLYGLCHAK-QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAI 303
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M++ G PDV +Y+ + + + + + EM I PNLV+Y +LL
Sbjct: 304 EVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGL 363
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
R G V+ +++ + G+K + ++ C+
Sbjct: 364 CRAG---RVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQ 400
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 202/450 (44%), Gaps = 76/450 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSTAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V E+M+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFGELVEKGFMPDAVTYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH ++ + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEELV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR VG +P+ +++T++ID+ G + A ++L+ M + G+ P +VA++ I
Sbjct: 417 AVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R A F+ M ++P+ + Y+ +L +R G E ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSG---ETEKMLRLYRTMMNDN 533
Query: 652 YKANDTYLKELI-----EEWC---EGVIQD 673
Y+ +D + L+ E+ C E +IQD
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEIIQD 563
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 168/380 (44%), Gaps = 35/380 (9%)
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
QN L ++ L V A +V+ +MQ +G+ A Y ++ C G
Sbjct: 672 GQNCNLYEHLITCL--VEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLG---FP 726
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMA-LKVKEDMLSAGVTPNTITW 401
+ +G + G+ L++ + I+ + + + K WQ A + VK ++G+ + W
Sbjct: 727 ETAHGLMDDALQSGI-PLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGI--DRRIW 783
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----- 456
++LI+A A +GL E+A +F+ M++ G P N +++A + + D + +
Sbjct: 784 NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQD 843
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ +SK+ V L D + E + ++PN H ++ T+
Sbjct: 844 MDFKISKSTVLLMLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL--------YRSMTS 893
Query: 517 TYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
C + +R V+ ++ EM G P+ + L++ +GN + Q+ + +
Sbjct: 894 LL------CHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSIL 947
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++ L
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK-AELR 1006
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
E Q ++++M Y+ N
Sbjct: 1007 E--QADQLFEEMRSKSYQLN 1024
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 152/353 (43%), Gaps = 55/353 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S+ ++ H +F +E+ M+ G
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSI--LEAG--LEPDEDTYNTLIVMYCRSLRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA LFEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ +++R+ GN + N+ K+
Sbjct: 1032 M-------------KIYRN--------------AGNHSKAENLLAVMKED---------- 1054
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT T +ILM + T + + ++N +++ L + + ++ + DA
Sbjct: 1055 ----------GIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDA 1104
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ + ++ L M+ DG+ PD +T I+ ++ A L + ++
Sbjct: 1105 YLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 149/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGNIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G + GE++ ++ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMD----FKISKSTVLLMLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+ + + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++ QSI
Sbjct: 919 DLSIFNSLLNMYTAAGNFDRTTQVY-------------------------------QSIL 947
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + L+NEM GL+P
Sbjct: 948 EA----------------GLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A Q+ + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G HE + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPHEAENVL 1083
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 51/350 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F K D+ ++ Y+ K PNM++ R++ + + + ++ +
Sbjct: 860 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPD 919
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +FNSL+N+ A + T +VY+++ + G+ D +YN L+ C ++ +E +
Sbjct: 920 LSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYC---RSLRPEEGFT 976
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L + +Y +++ A A+ + A ++ E+M S N + ++
Sbjct: 977 LLNEMGKRG-LTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
NAG +A +L M + G EP +IL+ + A Q A + S S +V
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEV-- 1093
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
S P +T ++ +K D
Sbjct: 1094 -----------------------------------------STLPYSTVFDAYLKNGDYD 1112
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+K L+ EM+ G+ P+H WT I A A+ +LK +++ G
Sbjct: 1113 -LGIKKLL-EMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCG 1160
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 23/310 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G +
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 654 ANDTYLKELI 663
+ + L+
Sbjct: 326 PDVVSISTLL 335
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 35/393 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +++ Y S + ++ L +Y M ++ K +
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSMRESNVKPD 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/482 (19%), Positives = 192/482 (39%), Gaps = 83/482 (17%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L + ME KD +
Sbjct: 313 VGL-----------------------LHEME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAI----------------------KV-CVRSKRLKQAFSLFE 607
MRE + PD V Y I KV + +L +A S F
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFS 445
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
MK P+++TY TL++A + G ++ ++++M G + L+E +
Sbjct: 446 SMKKSGCFPDVLTYTTLIQAYNAGGGW---KRAWDLFKEMEVNGIPPDAIICSSLMEAFN 502
Query: 668 EG 669
+G
Sbjct: 503 KG 504
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 173/419 (41%), Gaps = 71/419 (16%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ + G+ +L +++R ++ P++ +I+ I G +AI++ + ++ V
Sbjct: 164 IGQCGEAIELFNSMR----ERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGV 219
Query: 288 TLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +NSL+ A + L ++ ++K G+ D+ SY LL A + A+E
Sbjct: 220 KPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKARE 279
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ ++K K K + +Y+ ++ + A + A+ + +M G+ P+ ++ S+L+
Sbjct: 280 VFNKMK----KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLL 335
Query: 406 NACA---------------------------NAGL--------VEQAMHLFEEMLQAGCE 430
AC N+G+ E+A+ L+ M ++ +
Sbjct: 336 AACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVK 395
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ NIL+ + ++ + R F SK S E K ++
Sbjct: 396 PDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS--------------STKEGKLSEA- 440
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNH 548
S +SS K F P TY L++A + R L EM G+ P+
Sbjct: 441 --------ESTFSSMKKSGCF-PDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 491
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I + L++A G E LQ+++ M++ + + +Y I C + K A + E
Sbjct: 492 IICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 550
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 21/237 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-----------GEVKHLEAKGVLK 360
Y +M++ V D +YNIL+ G + + E K EA+
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFS 445
Query: 361 --------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
DV TY+T+++ + W+ A + ++M G+ P+ I SSL+ A G
Sbjct: 446 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGG 505
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
E+ + L E M + N + ++ +C + A + S + +++G
Sbjct: 506 EPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVG 562
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 241/557 (43%), Gaps = 99/557 (17%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + I+ V+G+LK++ LG+ P + + +G +++L
Sbjct: 224 SLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 283
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 284 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFAKMKTGRHKPD---RVT 332
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 333 YITLLDR-----------FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 381
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ A + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 382 GEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVF 441
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 442 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 498
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ CEP+ N L+ +A +
Sbjct: 499 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 557 DEAWKMFMRM-----------------------------------------------KEM 569
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 570 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 630 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 688
Query: 628 RSRYGSLHEVQQCLAVY 644
+ G + + + +A +
Sbjct: 689 VVKAGLIEDAYKIIANF 705
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 175/402 (43%), Gaps = 35/402 (8%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 246 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 306 CTARKLDCAKEVFAKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
+F + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 481
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 482 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 523
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+ PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 524 AIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 583
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G ++Q+ + +++ M + G N L + C+
Sbjct: 584 GLGKNG---KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 156/362 (43%), Gaps = 41/362 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH A G L + TY+ ++
Sbjct: 738 SERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGL 797
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + + G P+ T++ L++A +G +++ +++EM CEPN+
Sbjct: 798 LEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNT 857
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 858 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 915
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
+ + +P YNIL+ KA D AL M G+
Sbjct: 916 FEGMSD-------------YGCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 960
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L + ++E G++PDVV Y I + RL++A L
Sbjct: 961 PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVL 1020
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F EMK + I P+L TY +L+ G + E + +Y ++ +AG + N LI
Sbjct: 1021 FNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAGLEPNVFTFNALIR 1077
Query: 665 EW 666
+
Sbjct: 1078 GY 1079
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 170/401 (42%), Gaps = 73/401 (18%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 770 ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLL 829
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G EIY E+ E + + T++ ++ A AL + D++S
Sbjct: 830 DAYGKSGKIDELFEIYKEMSAHECEP----NTITHNIVISGLVKAGNVDDALDLYYDLMS 885
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE M GC PN NIL+ +A + D
Sbjct: 886 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD 945
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 946 AACALFKRMV--------------------------KEGV-------------------- 959
Query: 511 FKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+P TY++L+ C Y+R E++ GL+P+ + + ++I+ G
Sbjct: 960 -RPDLKTYSVLVDCLCMVGRVDEGLHYFR------ELKESGLNPDVVCYNLIINGLGKFH 1012
Query: 563 NVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E AL + M++ G++PD+ Y + I + +++A ++ E++ ++PN+ T+
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L+R S G + + AVYQ M G+ N ++L
Sbjct: 1073 NALIRGYSLSG---KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P+ TY+ LM D V L+ EM T+GL PN ++TI I G +G + A
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ILK M ++G PDVV YT I +++L A +F +MK + +P+ VTYITLL
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S L V Q + +M K G+ + L++ C+
Sbjct: 340 FSDNRDLDSVNQ---FWSEMEKDGHVPDVVTFTILVDALCK 377
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 199/500 (39%), Gaps = 84/500 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS-- 284
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 500
Query: 285 ---QNVTLN------------------------------IYVFNSLMNV--NAHDLKFTL 309
+VT N + V NSL+N A +
Sbjct: 501 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAW 560
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+++ + + +YN LL G A E++ + + KG + T++T+
Sbjct: 561 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF---EGMVQKGCPP-NTITFNTL 616
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ALK+ M+ G P+ T++++I G V++AM F +M +
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 675
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS-KTQVA--LGEDYDGN----------- 475
P+ LL V+A + A+++ ++ S Q A ED G+
Sbjct: 676 YPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAV 735
Query: 476 --TDR-ISNMEHKDKQSITNTPNFVPNSHYS--------------SFDKRFSFKPTTTTY 518
++R ++N +D SI VP YS F K +P TY
Sbjct: 736 SFSERLVANGICRDGDSI-----LVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTY 790
Query: 519 NILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N+L+ D + + + +++ G P+ ++ L+DA G SG ++ +I K M
Sbjct: 791 NLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLH 635
P+ + + I V++ + A L+ + M P TY L+ S+ G L+
Sbjct: 851 HECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 910
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
E +Q +++ M G + N
Sbjct: 911 EAKQ---LFEGMSDYGCRPN 927
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 881 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 941 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELK----ESGLNP 996
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 997 DVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1056
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1057 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1094
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + + +L+
Sbjct: 934 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N H L+ L ++ M+K G+ D+ +YN L+ +AG A
Sbjct: 994 LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1054 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109
Query: 404 LIN 406
L N
Sbjct: 1110 LPN 1112
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 219/522 (41%), Gaps = 51/522 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKH-LSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF ++ D ALR + ++H PN ++ +I + G G K+ ++ED+
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + + +L + M++ V ++ +YN ++ AC G
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGG-- 158
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ + + G + +G+ + D+ TY+T++ + + A V M AGV P++IT
Sbjct: 159 LEWEGLLGLFAQMRHEGI-QPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSIT 217
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW- 459
+++L++ A E L EM QAG P+ NIL++A A ++ A ++F+
Sbjct: 218 YNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
Query: 460 ---------TLSKTQVALGED--YDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYS 503
T S A G+ YD ++M+ + + NT N F +
Sbjct: 278 EAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQ 337
Query: 504 SFDKRF------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
F +P +TY L+ +C + K + M ++P +T LI
Sbjct: 338 ESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLI 397
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A M+E G PD+ Y I +A S + M I
Sbjct: 398 TAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGIS 457
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
++ TY +L+ A R G + + +DM +A N + L+ +C + D+
Sbjct: 458 ADVSTYNSLIEAFGRGGLFDD---AIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Query: 676 QNQ-------GE----------VTLCRRTNSQRPQSLLLEKV 700
+ Q GE +++C R N S +LE++
Sbjct: 515 KAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 129/568 (22%), Positives = 236/568 (41%), Gaps = 53/568 (9%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
I G+ID V + + L LG+ P + G K L C++ G E V + +EE
Sbjct: 203 IEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKAL---CRK----GNFEEAVDVFREMEE 255
Query: 184 FRLPVKELDEEFRIVQLCVNK-PDVNL----AIRYACIVPRADILFCNFVREFGKKRDLV 238
+ + I LC +K D+ A+R A P + +R F + L
Sbjct: 256 AGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR-AANWPIDTFAYTAVIRGFCSEMKLK 314
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A + +P+ YI +I G+ +++ A++ D+ S + N + +S++
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSIL 374
Query: 299 NVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ EV +K + G+ D YNI++ A C G A E+ E+K
Sbjct: 375 QCLC-EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRR- 432
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ LDV Y+T++ + A + E+M G+ P+ +T++ L+ + GL +
Sbjct: 433 ---MSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKK 489
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A+ L + + G +PNS N +++ A + A L+ + E+Y
Sbjct: 490 EALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-----EAFLNTLEDKCLENYSAM 544
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCT-DYYRV 532
D NF ++ +S K+ + + +L C +Y +
Sbjct: 545 VDGYCK------------ANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKA 592
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ M + + PN I + LI A G+++ A + ++ E G++PDV+ YT I
Sbjct: 593 LILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 652
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY------------GSLHEVQQC 640
R L++A +F +MK I+P+++TY +L S+ GS E
Sbjct: 653 YCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDA 712
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +M + G K + LI+ C+
Sbjct: 713 SPFWSEMKEMGIKPDVVCYTVLIDSHCK 740
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 159/373 (42%), Gaps = 38/373 (10%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G C G + ++ ++E+++ + + +I +N L+ + + K LE+ + G+
Sbjct: 444 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 503
Query: 321 MADMASYNILLKACCLAG---------NTV-------------------LAQEIYGEVKH 352
+ A++N +++ C+AG NT+ ++ Y
Sbjct: 504 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSR 563
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L +G+L + + + + ++ AL + E ML+ V PN I + LI A G
Sbjct: 564 LSKQGILVKKKSCFKLLSSLCMEGEY-DKALILLERMLALDVEPNQIMYGKLIGAFCRDG 622
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEAC--QFDRAFRLFRSWTLSKTQVALG 469
+++A +F+ +++ G P+ +++ C C + F + + +
Sbjct: 623 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
DG++ M + S + + S + S K KP Y +L+ + C
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
A L +EM GL P+ +++T L+ +C G+++ A+ ++ M G+ PD A +
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802
Query: 588 TAIKVCVRSKRLK 600
+ +++++++
Sbjct: 803 VLHRGILKARKVQ 815
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I GD +++ +++ L + +T ++ + ++N + L+ ++
Sbjct: 606 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 665
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEVKHLEAK 356
+ +M++ G+ D+ +Y ++L + A + E+K +
Sbjct: 666 FNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMG-- 723
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+K DV Y+ ++ Q A+ + ++M++ G+ P+ +T+++L+++C + G +++
Sbjct: 724 --IKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDR 781
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
A+ L EM G EP+S+ ++L + ++A
Sbjct: 782 AITLVNEMSFKGIEPDSRAMSVLHRGILKA 811
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +S L++ G ++ A+ I + ++ G++P+ Y IK R ++A
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
+F EM+ + PN VT T +
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEG 271
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 231/554 (41%), Gaps = 71/554 (12%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 223 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 281
Query: 193 EEFRIVQLC-VNKPDVNLAIRYACIV----PRADILFCNFVREFGKKRDLVSALRAYDAS 247
I LC K + I I P + FC + + ++ ++ AL D
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT-FCLLIEGYCREHNMGRALELLDEM 340
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--L 305
+K P+ +I+ C D + + E + + N+ V+++L+ A + +
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ + M GV D+ YN ++ AG +E + ++ +G LK D T
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGRG-LKPDAVT 456
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ + ++ A K ++ML G+ PN ++ LIN AG + +A+ +F +
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+ Q C+ + ++ + A ++F E K
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS-------------------------ELK 551
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+K + P TY+ L+ C KA L +EM G
Sbjct: 552 EKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++PN + L+D SG+++ A ++ M E G+ PD V Y+T I +S+ + +AF
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
SLF EM +QP+ Y L+ + G ++++ + ++++M + G+ A LI
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKGF-ATTLSFNTLI 705
Query: 664 EEWCEGV-IQDKNQ 676
+ +C+ IQ+ +Q
Sbjct: 706 DGYCKSCKIQEASQ 719
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 194/462 (41%), Gaps = 77/462 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++++ LGV+ D+ +
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 583
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 644 NVAEAFSLFHEMPSKGVQ------------------------------------------ 661
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 662 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 715
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M + PD V YTT I ++ ++++A LF+EM+ + + VTY +L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQ 678
++ G EV A+++ M G K ++ +I C+ ++D+ +
Sbjct: 776 YGYNKLGQSSEV---FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 679 GEVT-----------LCRRTNSQRPQSLLLEKVAVHLQKSAA 709
G +T LC+R + LL E + L+ S A
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 146/353 (41%), Gaps = 56/353 (15%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
++M + G++ + +Y I+ C A A+ + E++ K LK D S ++
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDG 253
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F L++K+ M+S G+ N IT++ LI+ G +E+A + + M+ GC+PN
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
S+ +L++ RA L + ME +
Sbjct: 314 SRTFCLLIEGYCREHNMGRALEL-----------------------LDEMEKR------- 343
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
N VP++ +Y ++ C D L+ +M GL PN +
Sbjct: 344 --NLVPSA---------------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LI G +E A ++L M G++PD+ Y I ++ ++++A + E++
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++P+ VT+ + S+ G + E + + +M G N+ LI
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAK---YFDEMLDHGLMPNNPLYTVLI 496
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 178/394 (45%), Gaps = 37/394 (9%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 523 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 580
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E + +KGV + F Y+ +V + A+ + +ML G
Sbjct: 641 KSENVAEAFSLFHE---MPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++++LI+ + +++A LF+EM+ P+ ++ +A + + A L
Sbjct: 697 -TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYS 503
F+ T++ T + G + G + + M K + T V +H
Sbjct: 756 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ +FK T +++L+ A C D L++EM +GL P+ +
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 875
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ L+ + +G ++ A ++ + ++ G+ PD
Sbjct: 876 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 909
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 39/333 (11%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K K D TY+ ++ A W+ A+ +
Sbjct: 153 YNMMIRLHARHNRTDQARGLFFEMQ----KCRCKPDAETYNALINAHGRAGQWRWAMNIM 208
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DML A + P+ T+++LINAC ++G ++A+++ ++M G P+ NI+L A
Sbjct: 209 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSG 268
Query: 447 CQFDRA---FRLFRSWTLSKTQVALG---------EDYDGNTDRISNMEHKDKQSITNTP 494
Q+ +A F L + + + YD D ++M+ K + P
Sbjct: 269 TQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC---HP 325
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ V T T I + + C +A N M GL PN +S+ L
Sbjct: 326 DVV-----------------TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNAL 368
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ A G ALQ+ ++++G PDVV+YT+ + RS++ ++A +F+ +K +
Sbjct: 369 LGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNL 428
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+PN+V+Y L+ A YGS ++ + + ++M
Sbjct: 429 KPNIVSYNALIDA---YGSNGLLEDAIEILREM 458
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 67/381 (17%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + +N+L+N + A ++ + + +M + + ++YN L+
Sbjct: 168 QARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 227
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC +GN W+ AL V + M
Sbjct: 228 NACGSSGN---------------------------------------WKEALNVCKKMTD 248
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P+ +T + ++ A + +A+ FE + P++ NI++ V+ Q+D+
Sbjct: 249 NGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDK 308
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS 510
A +F S K++ H D + T+ + + H + + F+
Sbjct: 309 AVDIFNSMKEKKSEC-----------------HPDVVTFTSMIHLYSVCGHIENCEAAFN 351
Query: 511 ------FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
KP +YN L+ A +AL NE++ G P+ +S+T L++A G S
Sbjct: 352 MMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSR 411
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A +I K+++ + + P++V+Y I + L+ A + EM+ +I PN+V+
Sbjct: 412 KPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSIC 471
Query: 623 TLLRARSRYGSLHEVQQCLAV 643
TLL A R G ++ L+
Sbjct: 472 TLLAACGRCGQKVKIDTVLSA 492
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 31/354 (8%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ SYN LL A G A +++ E+K + + DV +Y++++ + ++
Sbjct: 357 GLKPNIVSYNALLGAYAARGMENEALQVFNEIK----QNGFRPDVVSYTSLLNAYGRSRK 412
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
Q A ++ + + + PN +++++LI+A + GL+E A+ + EM Q PN
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICT 472
Query: 439 LLQACVEACQ---FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
LL AC Q D + VA Y+ N+ DK
Sbjct: 473 LLAACGRCGQKVKIDTVLSAAEMRGIKLNTVA----YNSAIGSYINVGEYDKAI------ 522
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
Y+S K+ K + TY +L+ CC + + + M EM + L + ++
Sbjct: 523 ----DLYNSMRKK-KIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSS 577
Query: 554 LIDA----CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+I A G + A +M+ G SPDVV YT + +++ ++ ++LFEEM
Sbjct: 578 IICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEM 637
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ + + L+RA ++ G V L++ Q M + +DT E++
Sbjct: 638 EENDVKLDTIACAALMRAFNKGGQPGRV---LSLAQSMREKDIPLSDTIFFEMV 688
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 25/295 (8%)
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
+V + L+ R P K E F++++ KP++ + Y ++ D N +
Sbjct: 396 DVVSYTSLLNAYGRSRKPQKA-REIFKMIKRNNLKPNI---VSYNALI---DAYGSNGLL 448
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E D + LR + K H PN+ T++ CG CG +K + + + L
Sbjct: 449 E-----DAIEILREMEQDKIH---PNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKL 500
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N +NS + +N + +++Y +M+K + +D +Y +L+ CC A
Sbjct: 501 NTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFM 560
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED----MLSAGVTPNTITWSS 403
E+ HL+ L + YS+I+ ++ + E M S G +P+ +T+++
Sbjct: 561 EEMMHLK----LPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTA 616
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++A A E+ LFEEM + + ++ C L++A + Q R L +S
Sbjct: 617 MLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQS 671
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ ++ K++ P++ ++++ G K+R I++ ++ N+ NI +N+L++
Sbjct: 381 ALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALID 440
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L+ +E+ + M++ + ++ S LL AC G V + E +G
Sbjct: 441 AYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAA---EMRG 497
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ KL+ Y++ + + + + A+ + M + +++T++ LI+ C +A
Sbjct: 498 I-KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 556
Query: 418 MHLFEEMLQ 426
+ EEM+
Sbjct: 557 LSFMEEMMH 565
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 186/396 (46%), Gaps = 25/396 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
++E++R+ NI FN+L+ ++ + KF ++V++ ++ + D+ ++N LL
Sbjct: 231 VFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLL---A 287
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G + E+ G K ++ G + + TY+T++ ++ + A+ + + ML G+T
Sbjct: 288 VFGQNGMDSEVSGVFKEMKRVGFVP-ERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGIT 346
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+++++ A A GL EQ+ + EM C+PN LL A + R
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGR---- 402
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPT 514
+AL E+ + K + + + + + + + KR F P
Sbjct: 403 ---------MLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPD 453
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+T N ++ K ++N M+ G +P+ ++ L+ S N E + ++LK
Sbjct: 454 LSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLK 513
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ PD+++Y T I R+ R+K+A +F EM+ + P+++TY T + + Y
Sbjct: 514 EILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFV---ASYA 570
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++ + V M K G K N +I+ +C+
Sbjct: 571 ADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 191/420 (45%), Gaps = 34/420 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLE 310
P++Y ++I C G Y ++ +++ + + + +N ++NV
Sbjct: 31 PDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITG 90
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G++ D +YN L+ CC G+ L +E + +++ G + D TY+T++
Sbjct: 91 LFEGMKNAGILPDEYTYNTLI-TCCRRGS--LYEEAAAVFEDMKSMGFVP-DKVTYNTLL 146
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
V+ ++ + A++V +M G +P+ +T++SLI+A A GL+E+AM L +M++ G +
Sbjct: 147 DVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIK 206
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHK 485
+ +L V + + A R+F + + + GN + + M K
Sbjct: 207 LDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEM-MK 265
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVG 543
+ I K P T+N L+ + V + EM+ VG
Sbjct: 266 VFEEI----------------KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVG 309
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P ++ LI A G+ + A+ + K M + G++PD+ Y + R +Q+
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ EM+ +PN +T+ +LL A Y + E+ + LA+ +++ + + LK L+
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHA---YANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 189/419 (45%), Gaps = 48/419 (11%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+ FVR GK SA+R ++ + PN+ +I + G G + + ++E++
Sbjct: 215 MLSGFVRT-GKDE---SAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Query: 283 RSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +I +N+L+ V N D + + V+K M+++G + + +YN L+ A G+
Sbjct: 271 KICCCVPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRVGFVPERDTYNTLISAYSRCGS 329
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +Y K + G+ D+ TY+ ++ A W+ + K+ +M PN +
Sbjct: 330 FDQAMAMY---KRMLDTGITP-DLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNEL 385
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCCNILLQACVEACQ 448
T SL++A AN + + + L EE+ EP NS+ C++LL+A
Sbjct: 386 THCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSK-CDLLLEA------ 438
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+RAF + S D +T + +Q +T T + +F K
Sbjct: 439 -ERAFLELKRKGFSP---------DLSTLNAMIAIYGRRQMVTKTNEIL------NFMKE 482
Query: 509 FSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P+ TYN L M + ++ R + ++ E+ G+ P+ IS+ +I A +G ++
Sbjct: 483 SGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKE 542
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A I MRE G+ PDV+ Y T + ++A + M + +PN TY +++
Sbjct: 543 ASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVI 601
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 182/414 (43%), Gaps = 58/414 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ Y T+I C Y ++ A++ED++S + +N+L++V + +K +EV
Sbjct: 102 PDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEV 161
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G + +YN L+ A A + +L + + E+K+ + +KLDVFTY+ ++
Sbjct: 162 LREMEVNGCSPSIVTYNSLISA--YARDGLLEEAM--ELKNQMVERGIKLDVFTYTAMLS 217
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A++V E+M +AG PN T+++LI N G + M +FEE+ C P
Sbjct: 218 GFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVP 277
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL G+ +G +S + + K
Sbjct: 278 DIVTWNTLL-------------------------AVFGQ--NGMDSEVSGVFKEMK---- 306
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
R F P TYN L+ A C + + A+ M G++P+
Sbjct: 307 ----------------RVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLS 350
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ++ A G E + +IL M++ P+ + + + + K + + +L EE+
Sbjct: 351 TYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
I+P+ V TL+ S+ L E ++ + ++ + G+ + + L +I
Sbjct: 411 CSGVIEPHAVLLKTLVLVNSKCDLLLEAER---AFLELKRKGFSPDLSTLNAMI 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 163/398 (40%), Gaps = 43/398 (10%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
N+ K G D+ +Y L+ AC G A ++ K +E +G K + TY+ I+ V+
Sbjct: 23 NLHKDGFEPDVYAYTSLITACVSNGRYREAVMVF---KKMEEEGC-KPTLITYNVILNVY 78
Query: 374 ADAKW-WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
W + E M +AG+ P+ T+++LI C L E+A +FE+M G P+
Sbjct: 79 GKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPD 138
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--DGNTDRISNMEH 484
N LL ++ + A + R ++ T +L Y DG + +++
Sbjct: 139 KVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKN 198
Query: 485 KDKQSITNTPNFVPNSHYSSFD---------------KRFSFKPTTTTYNILMKACCT-- 527
+ + F + S F + KP T+N L+K
Sbjct: 199 QMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRG 258
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + + E++ P+ ++W L+ G +G + K M+ G P+ Y
Sbjct: 259 KFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYN 318
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD- 646
T I R QA ++++ M I P+L TY +L A +R G + ++ LA QD
Sbjct: 319 TLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDG 378
Query: 647 MWKAGYKANDTYL------KE------LIEEWCEGVIQ 672
M K + + L KE L EE C GVI+
Sbjct: 379 MCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIE 416
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ C+ + + +++ L + + P+ + +T++ V C +++ +
Sbjct: 384 ELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFL 443
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+L+ + + ++ N+++ + + T E+ M++ G +A+YN L+ +
Sbjct: 444 ELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSE 503
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N ++E+ +K + AKG+ K D+ +Y+T++ + + A + +M +G+ P+
Sbjct: 504 NFERSEEV---LKEILAKGI-KPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDV 559
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++ + + A + E+A+ + M++ GC+PN N ++ + + D A + S
Sbjct: 560 ITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISS 619
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P Y L+ AC ++ +A+M +M G P I++ ++++ G G
Sbjct: 28 GFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNK 87
Query: 568 LQ-ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ + + M+ G+ PD Y T I C R ++A ++FE+MK P+ VTY TLL
Sbjct: 88 ITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLD 147
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD----KNQ 676
YG +++ + V ++M G + LI + +G++++ KNQ
Sbjct: 148 V---YGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQ 199
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L+N + G P+ ++T LI AC +G A+ + K M E+G P ++ Y + V
Sbjct: 19 SLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVY 78
Query: 594 VR-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ + LFE MK+ I P+ TY TL+ R GSL+E + AV++DM G+
Sbjct: 79 GKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITC-CRRGSLYE--EAAAVFEDMKSMGF 135
Query: 653 KANDTYLKELIEEW 666
+ L++ +
Sbjct: 136 VPDKVTYNTLLDVY 149
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I+ G G V A +L + +DG PDV AYT+ I CV + R ++A +F++M+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+P L+TY +L + G + +++ M AG ++ LI
Sbjct: 63 GCKPTLITYNVILNVYGKMG--MPWNKITGLFEGMKNAGILPDEYTYNTLI 111
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDG 323
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 35/393 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +++ Y S + ++ L +Y M ++ K +
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSMRESNVKPD 397
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 164/398 (41%), Gaps = 56/398 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P +I+ CG G++ K+ + + + V ++ N +++ N +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ V +D + NI++ G A E++ ++ K DV TY++I+
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK--CPPDVVTYTSIMH 196
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + + M++ GV PN + ++SL+ A A+ G+ +A+ +F + + G P
Sbjct: 197 SYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRP 256
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A + Q ++A +F
Sbjct: 257 DIVSYTSLLNAYGRSAQPEKAREVFNKM-------------------------------- 284
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
K+ S KP +YN L+ A + +A L++EM G+ P+ +
Sbjct: 285 ---------------KKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S + L+ ACG + IL+ R G+ + VAY + IK + ++A L+ M
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++P+ VTY L+ S+ G E L ++DM
Sbjct: 390 RESNVKPDAVTYNILISGSSKLGKYTE---SLRFFEDM 424
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 160/399 (40%), Gaps = 57/399 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ME KD +
Sbjct: 313 VGLLHE-----------------------ME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
MRE + PD V Y I + + ++ FE+M
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ +++ G + ++ AI+ ++ + +I + SL+N + EV
Sbjct: 221 PNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREV 280
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K + SYN L+ A AG + +E G + +E G+ + DV + ST++
Sbjct: 281 FNKMKKNSCKPNKVSYNALIDAYGSAG---MLKEAVGLLHEMEKDGI-QPDVVSISTLLA 336
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + E S G+ NT+ ++S I + + G E+A+ L+ M ++ +P
Sbjct: 337 ACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKP 396
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
++ NIL+ + ++ + R F SK
Sbjct: 397 DAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV---KHLEAKGVLKLDVFTYST 368
Y +M++ V D +YNIL+ G + + ++ K K L + +
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEFLWTIRWLEES 445
Query: 369 IVKVFAD-AKW---WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ V D +KW W+ A ++ E + S+ + + T + ++N G E M LF +M
Sbjct: 446 LGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKM 505
Query: 425 LQA 427
+ +
Sbjct: 506 VTS 508
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R DI+ + + + +G+ A ++ KK+ PN +ID G G
Sbjct: 255 RPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG------- 307
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
LK + + M+K G+ D+ S + LL AC
Sbjct: 308 --------------------------MLKEAVGLLHEMEKDGIQPDVVSISTLLAAC--- 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I ++ ++G+ L+ Y++ +K + ++ AL++ M + V P+
Sbjct: 339 GRCRQITRIETILEAARSRGI-DLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQA 427
+T++ LI+ + G +++ FE+M+ +
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDS 427
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 196/440 (44%), Gaps = 44/440 (10%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
+ L +PN++ +ID GD ++RA+ +++ + ++ +NSL++ +L+
Sbjct: 187 EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ M+ G D+ +YN L+ C G A + E+K +GV+ +V T+
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKR---EGVMA-NVVTF 302
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ PN +T++ L++ AG ++ A+ L EM+Q
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 427 AGCEPNSQCCNILLQA-CVEA--CQFDRAFRL-----FRSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + FRL R+ L T + G N++R
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSER 422
Query: 479 ISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
++ E KDK + + Y L+ C K+
Sbjct: 423 ALSLLSEMKDK----------------------GMELDVSLYGALIWGLCNLQKLDEAKS 460
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+N+M GL PN++ +T ++DAC + A+ +L+ M + G P++V Y +
Sbjct: 461 LLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++ + +A S F +M ++PN+ Y L+ + G L + + + +M G
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL---DKAVLLLDEMIDKGMSL 577
Query: 655 NDTYLKELIE-EWCEGVIQD 673
++ L++ +G +QD
Sbjct: 578 DNVVCTSLMDGHLKQGNLQD 597
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 163/419 (38%), Gaps = 55/419 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K + A++ + + PN ++D G + + +
Sbjct: 300 VTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNE 359
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V++ M++ G+ A+ Y L+ + N
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K KG ++LDV Y ++ + + A + M G+ PN +
Sbjct: 420 SERALSLLSEMKD---KG-MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNV 475
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++AC A +A+ L ++M+ +G PN L+ +A D A
Sbjct: 476 IYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI------ 529
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SH++ +P Y
Sbjct: 530 ----------------------------------------SHFNKMVD-LGLEPNVQAYT 548
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + KA L++EM G+S +++ T L+D GN++ A + M
Sbjct: 549 ALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ D+ YT + +++A + EM I P+ V Y L+ + G++ E
Sbjct: 609 GLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEE 667
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN I I+D C ++ A+ + + NI + +L++ A + +
Sbjct: 472 PNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH 531
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG--------------------NTVLAQEIYGEVK 351
+ M LG+ ++ +Y L+ C G N V + G +K
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591
Query: 352 H--------LEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L+AK + L+LD++ Y+ V F + Q A +V +M+ G+TP+ +
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651
Query: 401 WSSLINACANAGLVEQAMHLFEEM 424
++ LIN C G +E+A L EM
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEM 675
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 255/625 (40%), Gaps = 105/625 (16%)
Query: 100 SEGNVSKFASMLSLEMVASGIVKS-----------IREGRIDCVVGVLKKLNELGVAPLE 148
S+ N A +L EM+ G+ + +R G D VL+++ E V P
Sbjct: 412 SKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDN 471
Query: 149 LFDGSGFKLLKNECQR------------LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ FK +K+E QR L +S + L VL + + K+LD
Sbjct: 472 YTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVE 531
Query: 197 IV---------QLCV--------------------NKPDVNLAIRYACIVPRADILFCNF 227
+ Q+ V N P V + + + P +I F
Sbjct: 532 LFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRP-DEISFNTI 590
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ +++ L A ++ K PN ++ID C C + + +++ N+
Sbjct: 591 IKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNI 650
Query: 288 TLNIYVFNSLMN------------VNAHDLKFTLEVYKNMQKL--GVMADMASYNILLKA 333
+ + +++L+ N DL+ + + M++ GV D YN L+ A
Sbjct: 651 VPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDA 710
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C + A ++ E++ +K TY ++K + A A V + M
Sbjct: 711 CVRFHDVNRAVAVFQEMQF----SNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNC 766
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN++T+ LI+AC +E+AM +FE M + G + N+ L++ ++ + D+A
Sbjct: 767 LIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQAL 826
Query: 454 RLFRSWTLSK----TQVALGEDYD-----GNTDRISNMEHKDKQSITNT-PNFVPNSHYS 503
+++ + V D + + + + KQ I++T P+ + YS
Sbjct: 827 EVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLIT---YS 883
Query: 504 SFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ K F + YN L+ CC AL M +
Sbjct: 884 TMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEIL 943
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P++++++ILI G N+ AL +L+ M++DG+ P ++ YT ++ C++S++LK A
Sbjct: 944 KIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTA 1003
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF +M+ I+ + +TY T++
Sbjct: 1004 EQLFHDMRIQGIRGDQLTYQTMING 1028
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 148/664 (22%), Positives = 279/664 (42%), Gaps = 83/664 (12%)
Query: 52 VHSSQTAL--LSTVRRDLSSRND--YYA---DMASKLAKDGRLEEFAMIVESVVVSEGNV 104
++ +QTAL +++ ++ND YY M L K EE I V +
Sbjct: 301 LNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQIYNKVFTLSKDQ 360
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
M++ + G R R+ + VL + E G+ P E+ + + + C +
Sbjct: 361 PNCMDMMTFSCMIKGYC---RAQRLPQALNVLSIMKERGIKPDEVL----YNSIIDGCSK 413
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
++ + F+ E+L E P ++ CV + + A R + +
Sbjct: 414 --NNQIAKAFLLYDEMLGEGVTPTTITFNS--LIDCCVRSGNQDQAWRVLEQMKEKQVKP 469
Query: 225 CNF--------VREFGKKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGICGDYMKS 275
N+ ++ +++DL A Y+ + +P+ + ++D C C ++
Sbjct: 470 DNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRA 529
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL-------GVMADMASYN 328
+++ L+ Q+ I V N+ N+ L+ + + KN + + D S+N
Sbjct: 530 VELFKQLKPQSQP-QIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFN 588
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++K C LA E++ +K LK + TY++++ A ++ +
Sbjct: 589 TIIKGCAQEKKLQLAFEMFNLMK----MQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSE 644
Query: 389 MLSAGVTPNTITWSSLI----------NACANAGLVEQAMHLFEEMLQA--GCEPNSQCC 436
M + P+ T+S+LI N +N +E+A L E+M Q+ G +P+
Sbjct: 645 MQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILY 704
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSK---TQVALG---EDYDGNTDRISNMEHKDKQSI 490
N L+ ACV +RA +F+ S + V G + Y G+ +++ N K+
Sbjct: 705 NCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAY-GSANQLDNAFFVFKKMK 763
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNH 548
N +PNS TY L+ AC + R + M+ G+ N
Sbjct: 764 DNC--LIPNS---------------VTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNT 806
Query: 549 ISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I +T LI S ++ AL++ +IM+ +D + P+ V + + I C+R +K+A +FE
Sbjct: 807 IIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFE 866
Query: 608 EMKH--YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
EMK +P+L+TY T+++ R + +QQ L + DM K A++ L++
Sbjct: 867 EMKQPISHTKPDLITYSTMIKGFCREKN---IQQALIMLNDMEKNNIMADEVLYNSLLDG 923
Query: 666 WCEG 669
C+
Sbjct: 924 CCKA 927
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSRAIYE 280
I+F ++ F K L AL Y K PN ++ID C C K+ I+E
Sbjct: 807 IIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFE 866
Query: 281 DLRS--QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++ + ++ +++++ +++ L + +M+K +MAD YN LL CC
Sbjct: 867 EMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCK 926
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A +A ++Y ++ L+ +K TYS ++K++ + AL V E+M G+ P
Sbjct: 927 ANEIEMALKVYKNMEILK----IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
I ++ L+ C + ++ A LF +M G + ++ C+ + +FD L
Sbjct: 983 GLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILL 1042
Query: 457 RSWTLSKTQVA--LGEDYDGNTDRISNMEHKDKQSIT 491
+ + SK Q+ L ++ ++ + H+ KQ IT
Sbjct: 1043 KDASDSKVQLPHELSQNILTELNKWNTDNHQMKQEIT 1079
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 183/472 (38%), Gaps = 132/472 (27%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
DM +++ ++K C A A + +K +G+ K D Y++I+ + A
Sbjct: 365 DMMTFSCMIKGYCRAQRLPQALNVLSIMKE---RGI-KPDEVLYNSIIDGCSKNNQIAKA 420
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC------- 435
+ ++ML GVTP TIT++SLI+ C +G +QA + E+M + +P++
Sbjct: 421 FLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKG 480
Query: 436 --------------------------------CNILLQACVEACQFDRAFRLFRS---WT 460
N+LL AC+ Q DRA LF+ +
Sbjct: 481 IKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQS 540
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV--PNSHYSSFDK----------- 507
+ QV+ +D D + +S + D S N P V N H+ D+
Sbjct: 541 QPQIQVSNTDDAD---NSLSLEDSPD--SAKNAPAVVNSSNHHFMRPDEISFNTIIKGCA 595
Query: 508 -----RFSF-----------KPTTTTYNILMKAC--CT---------------------- 527
+ +F KP TYN L+ AC C
Sbjct: 596 QEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNF 655
Query: 528 -----------------------DYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSG 562
D + AL+ +M+ G+ P+ I + LIDAC
Sbjct: 656 TYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFH 715
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+V A+ + + M+ + P V Y IK + +L AF +F++MK + PN VTY
Sbjct: 716 DVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYG 775
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
L+ A + +++++ + V++ M + G + N LI+ + + D+
Sbjct: 776 CLIDACVKN---NQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQ 824
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 58/387 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKL 318
+I+ G G Y S + E ++ + V+ NI +N+++N A D + L ++ M+
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AK 377
GV D+ +YN LL AC G L E K + G++ ++ TYS IV+ F K
Sbjct: 249 GVQPDLVTYNTLLSACAARG---LGDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGK 304
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++A+ +KE M S G P+ +++ LI A A G +++AM +F++M AGC PN+ +
Sbjct: 305 LEKVAMLLKE-MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
ILL + ++D LF ++ K+
Sbjct: 364 ILLNLYGKHGRYDDVRELF-------------------------LQMKES---------- 388
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILI 555
S +P TTYNIL++ Y V L +++ + PN ++ L+
Sbjct: 389 ------------SAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
ACG G E A +IL M G+ P AY+ I+ ++ +A F M +
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
+ TY +L+ +R G E + L+
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILS 523
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G EI+ E + ++GV++
Sbjct: 127 DWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE---MASQGVIR-S 182
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ E M V+PN +T++++INACA L E + LF
Sbjct: 183 VFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLF 242
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +F KT + G
Sbjct: 243 AEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF------KTMIEGG------------ 284
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
VP + TT +Y + +V L+ EM +
Sbjct: 285 --------------IVP-------------EITTYSYIVETFGKLGKLEKVAMLLKEMES 317
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +LI+A G+++ A+ + K M+ G P+ Y+ + + + R
Sbjct: 318 EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDD 377
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
LF +MK +P+ TY L+R G EV
Sbjct: 378 VRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 149/364 (40%), Gaps = 62/364 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++KN L ++++ K G+ + ++ K+++ + K + Y+
Sbjct: 103 LDIFKNRLSLN------DFSLVFKEFAARGDWQRSLRLF---KYMQRQIWCKPNEHIYTI 153
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + + ++ ++M S GV + ++++LINA G E ++ L E M +
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDK 487
PN N ++ AC A G+ D++G + M H+
Sbjct: 214 VSPNILTYNTVINAC-----------------------ARGDLDWEGLLGLFAEMRHEGV 250
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
Q P TYN L+ AC +A M M G+
Sbjct: 251 Q------------------------PDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P +++ +++ G G +E +LK M +G PD+ +Y I+ + +K+A +
Sbjct: 287 PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDV 346
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F++M+ PN TY LL ++G +V++ ++ M ++ + + T LI
Sbjct: 347 FKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE---LFLQMKESSAEPDATTYNILIRV 403
Query: 666 WCEG 669
+ EG
Sbjct: 404 FGEG 407
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN ++++ G G Y R ++ ++ + + +N L+ V K + +
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ + +M +Y L+ AC G A++I + H+ KG++ YS +++
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI---LFHMNGKGIVPSSK-AYSGLIE 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + AL M G T++SLI+ A GL ++ + M + G
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N++ + +++ ++ Q++ A + F
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAF 557
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 19/243 (7%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
DV ++ A VP A + + +GK + K+ + P+ +I V
Sbjct: 345 DVFKQMQAAGCVPNAST-YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL--------MNVNAHDLKFTLEVYKNMQK 317
G G + + ++ DL +N+ N+ + L ++ +A + F +M
Sbjct: 404 FGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF------HMNG 457
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ +Y+ L++A G L E + G K + TY++++ FA
Sbjct: 458 KGIVPSSKAYSGLIEAY---GQAALYDEALVAFNTMNEVGS-KSTIDTYNSLIHTFARGG 513
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ + M G++ N ++S +I +G E+A+ F EM + CE + Q
Sbjct: 514 LYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLE 573
Query: 438 ILL 440
+L
Sbjct: 574 GVL 576
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM ++ CG G + ++ I + + + + ++ L+ + L
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + + +YN L+ G L +E + + G+ + + ++S I++
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGG---LYKEFEAILSRMREYGISR-NAKSFSGIIE 542
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ++ A+K +M + T ++ AGLV+++ F E+ +G P
Sbjct: 543 GYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILP 602
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-----LGEDYDGNTDRISNME 483
+ C ++L + ++D A L + KT+V+ +G+ G+ D SN +
Sbjct: 603 SVLCYCMMLAVYAKNGRWDDASELLDE--MIKTRVSSIHQVIGQMIKGDYDDDSNWQ 657
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 58/387 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKL 318
+I+ G G Y S + E ++ + V+ NI +N+++N A D + L ++ M+
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AK 377
GV D+ +YN LL AC G L E K + G++ ++ TYS IV+ F K
Sbjct: 249 GVQPDLVTYNTLLSACAARG---LGDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGK 304
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++A+ +KE M S G P+ +++ LI A A G +++AM +F++M AGC PN+ +
Sbjct: 305 LEKVAMLLKE-MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
ILL + ++D LF ++ K+
Sbjct: 364 ILLNLYGKHGRYDDVRELF-------------------------LQMKES---------- 388
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILI 555
S +P TTYNIL++ Y V L +++ + PN ++ L+
Sbjct: 389 ------------SAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
ACG G E A +IL M G+ P AY+ I+ ++ +A F M +
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
+ TY +L+ +R G E + L+
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILS 523
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G EI+ E + ++GV++
Sbjct: 127 DWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE---MASQGVIR-S 182
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ E M V+PN +T++++INACA L E + LF
Sbjct: 183 VFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLF 242
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +F KT + G
Sbjct: 243 AEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF------KTMIEGG------------ 284
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
VP + TT +Y + +V L+ EM +
Sbjct: 285 --------------IVP-------------EITTYSYIVETFGKLGKLEKVAMLLKEMES 317
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +LI+A G+++ A+ + K M+ G P+ Y+ + + + R
Sbjct: 318 EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDD 377
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
LF +MK +P+ TY L+R G EV
Sbjct: 378 VRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 149/364 (40%), Gaps = 62/364 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++KN L ++++ K G+ + ++ K+++ + K + Y+
Sbjct: 103 LDIFKNRLSLN------DFSLVFKEFAARGDWQRSLRLF---KYMQRQIWCKPNEHIYTI 153
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + + ++ ++M S GV + ++++LINA G E ++ L E M +
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDK 487
PN N ++ AC A G+ D++G + M H+
Sbjct: 214 VSPNILTYNTVINAC-----------------------ARGDLDWEGLLGLFAEMRHEGV 250
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
Q P TYN L+ AC +A M M G+
Sbjct: 251 Q------------------------PDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P +++ +++ G G +E +LK M +G PD+ +Y I+ + +K+A +
Sbjct: 287 PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDV 346
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F++M+ PN TY LL ++G +V++ ++ M ++ + + T LI
Sbjct: 347 FKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE---LFLQMKESSAEPDATTYNILIRV 403
Query: 666 WCEG 669
+ EG
Sbjct: 404 FGEG 407
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN ++++ G G Y R ++ ++ + + +N L+ V K + +
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ + +M +Y L+ AC G A++I + H+ KG++ YS +++
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI---LFHMNGKGIVPSSK-AYSGLIE 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + AL M G T++SLI+ A GL ++ + M + G
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N++ + +++ ++ Q++ A + F
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAF 557
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 19/243 (7%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
DV ++ A VP A + + +GK + K+ + P+ +I V
Sbjct: 345 DVFKQMQAAGCVPNAST-YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL--------MNVNAHDLKFTLEVYKNMQK 317
G G + + ++ DL +N+ N+ + L ++ +A + F +M
Sbjct: 404 FGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF------HMNG 457
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ +Y+ L++A G L E + G K + TY++++ FA
Sbjct: 458 KGIVPSSKAYSGLIEAY---GQAALYDEALVAFNTMNEVGS-KSTIDTYNSLIHTFARGG 513
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ + M G++ N ++S +I +G E+A+ F EM + CE + Q
Sbjct: 514 LYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLE 573
Query: 438 ILL 440
+L
Sbjct: 574 GVL 576
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM ++ CG G + ++ I + + + + ++ L+ + L
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + + +YN L+ G L +E + + G+ + + ++S I++
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGG---LYKEFEAILSRMREYGISR-NAKSFSGIIE 542
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ++ A+K +M + T ++ AGLV+++ F E+ +G P
Sbjct: 543 GYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILP 602
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-----LGEDYDGNTDRISNME 483
+ C ++L + ++D A L + KT+V+ +G+ G+ D SN +
Sbjct: 603 SVLCYCMMLAVYAKNGRWDDASELLDE--MIKTRVSSIHQVIGQMIKGDYDDDSNWQ 657
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 194/438 (44%), Gaps = 40/438 (9%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
D + KH P+ T+ID G ++ A+ + + + Y FN +N
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDT----YAFNCCINGLSKL 545
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ L+VY M +L ++ D ++NIL+ C AGN A ++ E + AK L+ D
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE---MVAKN-LQPD 601
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T+ ++ A + A + + M + GV PN +T+++L++ +G +E+A E
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
EM+ +GC P+S L+ A A + D A +L +S+ V DG
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK-- 719
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKA 534
+ +Q+IT V H+ P TYN L+ + C + R+
Sbjct: 720 ---SGQTEQAITVLEEMVGKGHH----------PDVVTYNTLIDSLCKAGDLEEARRLHG 766
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMRED-GMSPDVVAYTTAIKV 592
M+ + PN +++++LI+ G ++ A ++++ +MR+ + P+++ Y + +
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDG 826
Query: 593 CVRSKRLKQAFSLFEEMKH--YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + +A L ++ ++ P+ VT+ TL+ + G E V+ DM
Sbjct: 827 LCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN---VFDDMIAG 883
Query: 651 GYKANDTYLKELIEEWCE 668
GY N L+ C+
Sbjct: 884 GYVPNVVTYNVLMNGLCK 901
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 56/349 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA----QEIYGEVKHLEAKGVLKLDVF 364
L++ ++ G D +YNIL+ +G T A +E+ G+ H DV
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP--------DVV 743
Query: 365 TYSTIVKVFADAKWWQMALKVKEDM---LSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
TY+T++ A + A ++ DM +S PN +T+S LIN G +++A L
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 422 EEMLQAGCE--PNSQCCNILLQAC------VEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+EM++ C+ PN N L EAC+ R+ R S +S V D
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR-DGSLRVSPDTVTFSTLID 862
Query: 474 G-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC 526
G TD N+ FD + + P TYN+LM C
Sbjct: 863 GLCKCGQTDEACNV----------------------FDDMIAGGYVPNVVTYNVLMNGLC 900
Query: 527 -TDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
TD R A++ M G++P+ I++++L+DA + +V+ AL++L M G +P+VV
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYG 632
+ + I +S + +AF +F++M + + P+ +TY TL+ R G
Sbjct: 961 TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNELGAG 235
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L +M C PN ++L+
Sbjct: 236 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295
Query: 443 CVEACQFDRAFRLFRSWTLSKTQV-----ALGEDYDG------NTDRISNMEHKDKQSIT 491
+ + D A L + T V DG + M S+
Sbjct: 296 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355
Query: 492 NTPNFVPNSHY--------------SSFDKRFS--FKPTTTTYNILMKACC--TDYYRVK 533
+P+ V S S FD + + P TYN L+ C R
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A++ M G++P+ I++++L+DA + V+ AL++L M G +P+VV + + I
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Query: 594 VRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+S R +AF +F++M + + P+ +TY TL+ R G + + L D
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD 529
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 198/470 (42%), Gaps = 49/470 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L + + ++ + P++ T+ID GD ++R ++ D+ S++ N+
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ A V +DM++ G PN IT+++L+N
Sbjct: 348 SLR----DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 403
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSK 463
A +E+A + E M+ G P+ ++L+ A +A + D A L S +
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 463
Query: 464 TQVALGEDYDG--NTDRISN-MEHKDKQSITNTPNFVPN--SHYSSFDKRFSF------- 511
V DG +DR + D ++ + VP+ ++ + D F
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH--GLVPDKITYCTLIDGLFRTGRAGQAE 521
Query: 512 -------KPTTTTYNILMKACCT-------DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P T +N CC D R + N M + L P+ +++ ILI
Sbjct: 522 ALLDAMPDPDTYAFN-----CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN E A + + M + PDV+ + I ++ +++ A + + M + + PN
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+VTY L+ + G + E Q L ++M +G + L+ C
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFL---EEMVSSGCVPDSITYGSLVYALC 683
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 207/531 (38%), Gaps = 87/531 (16%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L K GR+EE +E +V S G V + SL + R R D +
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSL------VYALCRASRTDDAL 692
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ +L G P D + +L + L SG+ E + VLEE
Sbjct: 693 QLVSELKSFGWDP----DTVTYNILVD---GLWKSGQTEQAI---TVLEEM--------- 733
Query: 194 EFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
V K PDV + + + K DL A R +
Sbjct: 734 --------VGKGHHPDV--------------VTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Query: 251 LSS---PNMYICRTIIDVCGIC--GDYMKSRAIYEDL--RSQNVTLNIYVFNSLMN--VN 301
+S PN+ +I+ G+C G ++R + +++ +S +V NI +NS ++
Sbjct: 772 VSRCCVPNVVTYSVLIN--GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 302 AHDLKFTLEVYKNMQ--KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
+ E+ ++++ L V D +++ L+ C G T A ++ + + A G +
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD---MIAGGYV 886
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + A + E M+ GVTP+ IT+S L++A A V++A+
Sbjct: 887 P-NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALE 945
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L M GC PN N ++ ++ Q AF++F TL Y D +
Sbjct: 946 LLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Query: 480 SNMEHKDK-----QSITNTPNFVPNSHYSSFDK------------RFSFKPTTTTYNILM 522
+ ++ + + N + K P T+NIL+
Sbjct: 1006 FRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILI 1065
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
C ++ + AL EM L P+ +++ LID +G VE I+
Sbjct: 1066 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 29/311 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY+ ++ A W+ A+ + +DML A + P+ T+++LINAC ++G ++A++
Sbjct: 194 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 253
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ----------V 466
+ ++M + G P+ NI+L A Q+ + F L + + V
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YS----------SFDKRFS--FKP 513
LG++ D ++M+ K + + F H YS +F+ + KP
Sbjct: 314 KLGQNGKA-IDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN L+ A + +A + NE++ G P+ +S+T L++A G SG E A+++
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++MR + P++V+Y I L +A + EM+ +QPN+V+ TLL A R
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRC 492
Query: 632 GSLHEVQQCLA 642
G +++ L+
Sbjct: 493 GQKVKIKSVLS 503
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 169/410 (41%), Gaps = 59/410 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D+ ++++ K+ P++ TII + +CG + + + ++ + NI
Sbjct: 319 GKAIDIFNSMK----EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 292 YVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+ A H + K V+ ++K G D+ SY LL A +G A +++
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF-- 432
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + K ++ +Y+ ++ + A+++ +M GV PN ++ +L+ AC
Sbjct: 433 --ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACG 490
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + + G + N+ N + + + ++D+A L+R+ K
Sbjct: 491 RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV----- 545
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
KP TYN+L+ CC +
Sbjct: 546 ------------------------------------------KPDPVTYNVLISGCCKMS 563
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y ++EM + + + ++ +I A G V A + M+ G PDV+ YT
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
I ++ ++A +LF EM+ +QP+ + +L+RA ++ G +V
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV 673
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ G A +I+ +K E + DV T++TI+
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMK--EKRSECYPDVVTFTTIIH 347
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + ML+ G+ PN +++++LI A A+ G+ ++A +F E+ + G P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A ++ + ++A ++F
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFE---------------------------------- 433
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+R KP +YN L+ A + +A +++EM G+ PN +
Sbjct: 434 -------------LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + AY +AI + +A SL+ M
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Query: 610 KHYQIQPNLVTYITLLRA---RSRYG 632
+ +++P+ VTY L+ S+YG
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYG 566
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 153/397 (38%), Gaps = 82/397 (20%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G K L A+ +++ PN+ T++ CG CG +K +++ +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 287 VTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------- 335
+ LN +NS ++V +D +L Y+ M+ V D +YN+L+ CC
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567
Query: 336 --------LAGNTVLAQEIYGEV--------KHLEAKGVL--------KLDVFTYSTIVK 371
+ L++E+Y V + EA+ + + DV TY+ ++
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A+ W+ A + +M + V P++I SSL+ A G + + L E M +
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ ++ AC ++ L + S + V++G
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG---------------------- 725
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ F + +MK +Y++ A G N ++
Sbjct: 726 ------------LLNQLLHFLGKSGKIETMMKL----FYKIVA-------SGAEINFYTY 762
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+IL+ +GN +++L+ M E G+ P V Y +
Sbjct: 763 SILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS 799
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID----------------- 264
+ + + + +GK A++ ++ +++ PN+ +ID
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 265 ------------------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNA 302
CG CG +K +++ + + LN +N S ++V
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D +L Y+ M+ V D +YN+L+ CC A E+ L+ + L
Sbjct: 530 YDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLK----IPLS 583
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
YS+++ ++ A + M G P+ IT++++I+A A E+A LF
Sbjct: 584 KEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQ 448
EM +P+S C+ L++A + Q
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L EM+ P+ ++ LI+A G +G A+ I+ M + P Y I
Sbjct: 180 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 239
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
C S K+A ++ ++M + P+LVT+ +L A R
Sbjct: 240 NACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKR 279
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 185/419 (44%), Gaps = 65/419 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ Y +N L++ + A ++ LE+ +M+K G+ DM +Y I+ K L G A+EI
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII 278
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-------------- 393
K L +G LK D+ TY+ ++ + AL+++ D+LS+G
Sbjct: 279 Q--KMLTDEG-LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 394 ---------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ P+ +T+S LI+ G V+QA+ L++EM PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNME-----HK 485
S + +L+ E A F S +S + V L ++ ++E +K
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455
Query: 486 DKQSITNTPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKACCTD- 528
+ TP+ V NS F K +P+ TY LM A C +
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
++ L+ EM + P +++T++I +E ++Q+L+ MR G++PD + Y
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I+ ++K +++AF L ++M + ++P TY L+ RYG + + + L QD
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQD 634
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 172/422 (40%), Gaps = 49/422 (11%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+CG C G+ ++ + DL S LN+ +++ L++ + L++ M+ +
Sbjct: 298 ICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y+IL+ C G A ++Y E+ + + F +S I+K +
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEM----CFNRIFPNSFAHSGILKGLCEKGMLS 413
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + ++ + + P+ ++ +I+ G VE+A+ L++ + P+ N L+
Sbjct: 414 DARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLI 473
Query: 441 QACVEACQFDRAFRLFRSWTL------SKTQVALGEDY--DGNTDRISN----MEHKDKQ 488
+ + A RL S L + T L Y +GN +++ M KD
Sbjct: 474 YGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD-- 531
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+PT TY +++K C ++ L+ +MR GL+P
Sbjct: 532 ----------------------IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAP 569
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ +I + ++ A ++L M + P Y I R ++ A +
Sbjct: 570 DQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVL 629
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ I V Y T+++A G + Q+ + V+ M + G++ + +I
Sbjct: 630 VSLQDRNINLTKVAYTTMIKAHCVKG---DAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686
Query: 667 CE 668
C+
Sbjct: 687 CK 688
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 146/336 (43%), Gaps = 26/336 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++ + +ID GD ++ +Y+ LR + +T +I FNSL+ + K +E +
Sbjct: 429 PDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRK-VVEARR 487
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYST 368
++ + G+ +Y L+ A C GN E+ E +K +E V TY+
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT------VVTYTV 541
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K + + ++++ EDM + G+ P+ IT++++I A + +A L ++ML
Sbjct: 542 VIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN 601
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP N+L+ + A R+ S +D + N +++
Sbjct: 602 LEPTPATYNVLIDGLCRYGDVEDADRVLVSL----------QDRNINLTKVAYTTMIKAH 651
Query: 489 SITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
+ + +K F S K + N L K C + K M + G+SP
Sbjct: 652 CVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLIN--EAKYYFCIMLSDGVSP 709
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ + ++++A +G+V ++L +M + G+ D
Sbjct: 710 DQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 121/288 (42%), Gaps = 64/288 (22%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++++++++ GL + A F ML+ G P++ NIL+ + A + A
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L ++ME KQ + +P
Sbjct: 242 L-----------------------TNDME---KQGL---------------------QPD 254
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTV--------GLSPNHISWTILIDACGGSGNVEG 566
TY I+ K + + LM+ R + GL P+ +++T+LI GN+E
Sbjct: 255 MVTYKIVAKG-----FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEE 309
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++ + + G +V+ Y+ + + ++ +A L EM+ +QP+LVTY L+
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIH 369
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ G +VQQ + +Y++M N +++ CE G++ D
Sbjct: 370 GLCKQG---KVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 511 FKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P+ ++N +M C D K+ M G+ P+ S+ ILI +G++E
Sbjct: 181 FAPSVVSFNTIMSRYCKLGLADV--AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEE 238
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLL 625
AL++ M + G+ PD+V Y K + A + ++M ++P+LVTY L+
Sbjct: 239 ALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLI 298
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G+ +++ L + +D+ +G++ N L+ C+
Sbjct: 299 CGHCQMGN---IEEALRLRRDLLSSGFQLNVILYSVLLSSLCK 338
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 29/311 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY+ ++ A W+ A+ + +DML A + P+ T+++LINAC ++G ++A++
Sbjct: 194 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 253
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ----------V 466
+ ++M + G P+ NI+L A Q+ + F L + + V
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YS----------SFDKRFS--FKP 513
LG++ D ++M+ K + + F H YS +F+ + KP
Sbjct: 314 KLGQNGKA-IDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN L+ A + +A + NE++ G P+ +S+T L++A G SG E A+++
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++MR + P++V+Y I L +A + EM+ +QPN+V+ TLL A R
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRC 492
Query: 632 GSLHEVQQCLA 642
G +++ L+
Sbjct: 493 GQKVKIKSVLS 503
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 169/410 (41%), Gaps = 59/410 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D+ ++++ K+ P++ TII + +CG + + + ++ + NI
Sbjct: 319 GKAIDIFNSMK----EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 292 YVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+ A H + K V+ ++K G D+ SY LL A +G A +++
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF-- 432
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + K ++ +Y+ ++ + A+++ +M GV PN ++ +L+ AC
Sbjct: 433 --ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACG 490
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + + G + N+ N + + + ++D+A L+R+ K
Sbjct: 491 RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV----- 545
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
KP TYN+L+ CC +
Sbjct: 546 ------------------------------------------KPDPVTYNVLISGCCKMS 563
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y ++EM + + + ++ +I A G V A + M+ G PDV+ YT
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
I ++ ++A +LF EM+ +QP+ + +L+RA ++ G +V
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV 673
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ G A +I+ +K E + DV T++TI+
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMK--EKRSECYPDVVTFTTIIH 347
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + ML+ G+ PN +++++LI A A+ G+ ++A +F E+ + G P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A ++ + ++A ++F
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFE---------------------------------- 433
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+R KP +YN L+ A + +A +++EM G+ PN +
Sbjct: 434 -------------LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + AY +AI + +A SL+ M
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Query: 610 KHYQIQPNLVTYITLLRA---RSRYG 632
+ +++P+ VTY L+ S+YG
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYG 566
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 153/397 (38%), Gaps = 82/397 (20%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G K L A+ +++ PN+ T++ CG CG +K +++ +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 287 VTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------- 335
+ LN +NS ++V +D +L Y+ M+ V D +YN+L+ CC
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567
Query: 336 --------LAGNTVLAQEIYGEV--------KHLEAKGVL--------KLDVFTYSTIVK 371
+ L++E+Y V + EA+ + + DV TY+ ++
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A+ W+ A + +M + V P++I SSL+ A G + + L E M +
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ ++ AC ++ L + S + V++G
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG---------------------- 725
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ F + +MK +Y++ A G N ++
Sbjct: 726 ------------LLNQLLHFLGKSGKIETMMKL----FYKIVA-------SGAEINFYTY 762
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+IL+ +GN +++L+ M E G+ P V Y +
Sbjct: 763 SILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS 799
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID----------------- 264
+ + + + +GK A++ ++ +++ PN+ +ID
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 265 ------------------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNA 302
CG CG +K +++ + + LN +N S ++V
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D +L Y+ M+ V D +YN+L+ CC A E+ L+ + L
Sbjct: 530 YDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLK----IPLS 583
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
YS+++ ++ A + M G P+ IT++++I+A A E+A LF
Sbjct: 584 KEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQ 448
EM +P+S C+ L++A + Q
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L EM+ P+ ++ LI+A G +G A+ I+ M + P Y I
Sbjct: 180 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 239
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
C S K+A ++ ++M + P+LVT+ +L A R
Sbjct: 240 NACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKR 279
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 173/373 (46%), Gaps = 35/373 (9%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNM 315
I + G+C G K+ I ED++ + V+ N+ +N+L++ K + K M
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM 227
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ + ++NIL+ C N A +++ E+ +GV K +V TY++++ +
Sbjct: 228 RADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR---QGV-KPNVVTYNSLINGLCN 283
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A +++ M+++ + PN IT ++L+N +V+QA LF++M + G PN
Sbjct: 284 NGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE----DYDGNTDRISNMEHK-DKQSI 490
NIL+ A + + AF L+R + LG+ D I+ + K D ++
Sbjct: 344 YNILIDAYCKDENMEDAFALYR--------IMLGKGVCPDVSTYNCLIAGLCRKGDLEAA 395
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N + + H K TYNIL+ + C KA L++EM GL P+
Sbjct: 396 RNLVSEMDTKH---------LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ +ID GN+ AL + M + G +V Y IK + +L+ A L E
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506
Query: 609 MKHYQIQPNLVTY 621
M + PN +TY
Sbjct: 507 MLEKGLIPNRMTY 519
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 62/370 (16%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D++F VYK M + + + S+NI++ C G A +I ++ ++ +GV +V
Sbjct: 146 DMEF---VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDI---IEDMKVRGV-SANV 198
Query: 364 FTYSTIVKVFAD-AKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TY+T++ + K +M A + ++M + G+ PN +T++ LI+ V AM +
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM + G +PN N L+ + + A L
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL------------------------- 293
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
+ + N+ KP T+N L+ C + +A L ++
Sbjct: 294 ------RDQMVNS----------------CLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G++PN ++ ILIDA N+E A + +IM G+ PDV Y I R
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
L+ A +L EM ++ +L+TY L+ + G E+++ L + +M + G K +
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKG---EMKKALRLLDEMCRKGLKPSQLT 448
Query: 659 LKELIEEWCE 668
+I+ +C+
Sbjct: 449 YNTMIDGYCK 458
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ K + T+ N LM + ++ + EM + P IS+ I+I+ G +
Sbjct: 122 YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNK 181
Query: 567 ALQILKIMREDGMSPDVVAYTTAIK-VCVRSK--RLKQAFSLFEEMKHYQIQPNLVTYIT 623
A I++ M+ G+S +V+ Y T I C K ++ +A ++ +EM+ I PN VT+
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
L+ + V + V+ +M + G K N LI C N G+V
Sbjct: 242 LIDG---FCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC---------NNGKVNE 289
Query: 684 CRRTNSQRPQSLLLEKVAVH 703
Q S L + H
Sbjct: 290 ATALRDQMVNSCLKPNIITH 309
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 210/458 (45%), Gaps = 32/458 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + I+E++R+ NI FN+ + + + KF +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F EM+ I P+++TY T + + Y + ++ + V + M K G + N +++
Sbjct: 722 FSEMRDSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 666 WCEGVIQDKNQNQGEVTLCRRTNSQRPQS---LLLEKV 700
+C+ + K++ + V R + P+ LLE++
Sbjct: 779 YCK--LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERI 814
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 184/445 (41%), Gaps = 59/445 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + F A+ + ++ P + I++V G G + K ++ E +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + Y +N+L+ + +V++ M+ G D +YN LL + G +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLD---VYGKS 327
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E + +E G + TY++++ +A A+++K M G P+ T
Sbjct: 328 HRPKEAMKVLNEMELNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG VE AM++FEEM AGC+PN C F+ +++
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKPN-------------ICTFNAFIKMY---- 429
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GN + +M I + N P T+N
Sbjct: 430 -------------GNRGKFVDM-----MKIFDEINVC------------GLSPDIVTWNT 459
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ G P ++ LI A G+ E A+ + + M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A Y + E+
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA---YANGKEIG 576
Query: 639 QCLAVYQDMWKAGYKANDTYLKELI 663
++ ++++ + LK L+
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLV 601
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 200/462 (43%), Gaps = 38/462 (8%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D+ + + F + + SA+ ++ + PN+ I + G G ++
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I++++ ++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAY 499
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G+ A +Y + + GV D+ TY+T++ A W+ + KV +M
Sbjct: 500 SRCGSFEQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC------- 447
PN +T+ SL++A AN + L EE+ EP + +LL+ V C
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLP 611
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ +RAF + S L S + ++ + N V + + K
Sbjct: 612 EAERAFSELKERGFSPDITTLN----------SMVSIYGRRQMVGKANEVLD-----YMK 656
Query: 508 RFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F P+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + +
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +I MR+ G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 717 DASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE-LIEEW 666
+ E + + +++ K D L E ++++W
Sbjct: 777 DGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKKW 818
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 24/314 (7%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQA 417
LDV++Y++++ FA++ ++ A+ V + M G P IT++ ++N G +
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG 474
L E+M G P++ N L+ C A ++F ++ S +V Y+
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVT----YNA 319
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D + H+ K+++ N F P+ TYN L+ A D +A
Sbjct: 320 LLD-VYGKSHRPKEAMKVLNEMELN----------GFSPSIVTYNSLISAYARDGMLDEA 368
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L N+M G P+ ++T L+ +G VE A+ I + MR G P++ + IK+
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKM 428
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ +F+E+ + P++VT+ TLL + G EV V+++M +AG+
Sbjct: 429 YGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRAGF 485
Query: 653 KANDTYLKELIEEW 666
LI +
Sbjct: 486 VPERETFNTLISAY 499
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVG 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRD---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L N ++ G S + S+T LI A SG A+ + K M E+G P ++ Y + V
Sbjct: 195 LFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFG 254
Query: 595 R-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + SL E+MK I P+ TY TL+ R GSLH Q+ V+++M AG+
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR-GSLH--QEAAQVFEEMKAAGFS 311
Query: 654 ANDTYLKELIE 664
+ L++
Sbjct: 312 HDKVTYNALLD 322
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+I G G V A + ++EDG S DV +YT+ I S R ++A ++F++M+
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 613 QIQPNLVTYITLLRARSRYGS 633
+P L+TY +L + G+
Sbjct: 238 GCKPTLITYNVILNVFGKMGT 258
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 205/485 (42%), Gaps = 43/485 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPR-----------------ADIL-FCNFVREFGKKR 235
EF V +C N N+ I + C + R D++ + V + +
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 797
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 854
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 855 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 963
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 1138
Query: 651 GYKAN 655
G A+
Sbjct: 1139 GLAAD 1143
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 636 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 695
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 696 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 869
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +EM +QP +VT+ L+ +G L + ++ L M G N T L+
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNSLV 1046
Query: 664 EEWC 667
+++C
Sbjct: 1047 KQYC 1050
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 34/294 (11%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILL----QACVEACQFDRAFRLFRS----WTLSK 463
GL+ +A +FE+ML G + CN+ L + C + FR F W ++
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691
Query: 464 TQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNS-------HYSSFDK------- 507
+ + + RI H + TP+ + S + DK
Sbjct: 692 YNIVI--HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749
Query: 508 --RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R KP + Y ++ C + +EM G+ P+ + +T LID G+
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + M ++PDV+ YT I + + +A LF EM ++P+ VT+
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L+ + G + + V+ M +AG N LI+ C EG + N+
Sbjct: 870 LINGYCKAGHM---KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 162/367 (44%), Gaps = 37/367 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M + GV ++ +YNIL++ C AGN + +GE +E G L +V TY+TI+
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGE---MERNGCLP-NVVTYNTII 245
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A K+ M G+ PN I+++ +IN G +++ + EEM +
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYD-----GNTDRISNM 482
P+ N L+ F +A L LS V + GN +R M
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA--M 363
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
E D+ + P TY L+ + +A +M EM
Sbjct: 364 EFLDQM------------------RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P I++ LI+ G +E A +L+ M E G PDVV+Y+T I R++ L+
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+AF L EM I P++ TY +L++ + L EV C ++Q+M G ++
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEV--C-DLFQEMLSLGLPPDEVTYT 522
Query: 661 ELIEEWC 667
LI +C
Sbjct: 523 SLINAYC 529
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 198/449 (44%), Gaps = 55/449 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SPN+Y +I G+ + ++ N+ +N++++ L+ E +
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC-KLRKIGEAF 258
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K ++ + G+ ++ SYN+++ C G EI E+ +K D T++T+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----SKRRYVPDRVTFNTL 314
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + AL + +M+ G++PN +T+++LIN+ AG + +AM ++M G
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN--TDRISNMEH 484
PN + L+ + +A+++ + + T + +G+ R+ +
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 485 KDKQSITNTPNFVPNS-HYSS----------FDKRFSFK---------PTTTTYNILMKA 524
++ I F+P+ YS+ +K F K P TY+ L++
Sbjct: 435 LLQEMIER--GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C V L EM ++GL P+ +++T LI+A G+++ AL++ M + G SPD
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---------------ITLLRA 627
+V Y I + R K+A L ++ + + PN +TY + L++
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
G ++E + L + M + GYK N+
Sbjct: 613 FCMKGLMNEADRVL---ESMLQKGYKLNE 638
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 18/308 (5%)
Query: 363 VFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
V +Y+ I+ V + ++A + ++M+ +GV+PN T++ LI AG +E + F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + GC PN N ++ A + + AF+L R L L + I+
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK----GLNPNLISYNVVING 282
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + T+ KR + P T+N L+ C ++++ L EM
Sbjct: 283 LCREGQMKETSEI-------LEEMSKR-RYVPDRVTFNTLINGYCNVGNFHQALVLHAEM 334
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GLSPN +++T LI++ +GN+ A++ L MR+ G+ P+ YTT I + L
Sbjct: 335 VKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFL 394
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
KQA+ + +EM P ++TY L+ G + + L Q+M + G+ +
Sbjct: 395 KQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL---QEMIERGFIPDVVSY 451
Query: 660 KELIEEWC 667
+I +C
Sbjct: 452 STIISGFC 459
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 54/375 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K +L A+ D + PN T+ID G ++ I ++
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ T I +N+L +N H + +E + + M + G + D+ SY+ ++ C
Sbjct: 404 MVENGFTPTIITYNAL--INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-- 459
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L + +V+ + AKG+ DV TYS++++ + + ++MLS G+ P+
Sbjct: 460 RNQELEKAFQLKVE-MVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SLINA G +++A+ L +EM+Q G P+ N+L+ + + A RL
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + V Y+ D +N+E K +
Sbjct: 578 KL-LYEESVPNEITYNTLIDNCNNLEFKSALA---------------------------- 608
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LMK C +K LMNE M G N + ++I GN+E A +
Sbjct: 609 ---LMKGFC-----MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
Query: 571 LKIMREDGMSPDVVA 585
K M G +P V
Sbjct: 661 YKEMLHSGFAPHSVT 675
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K + F P +YN ++ A VK + EM G+SPN ++ ILI +GN
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E L M +G P+VV Y T I + +++ +AF L M + PNL++Y
Sbjct: 219 LEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ R G + E + L ++M K Y + LI +C
Sbjct: 279 VINGLCREGQMKETSEIL---EEMSKRRYVPDRVTFNTLINGYC 319
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++ CT L EM G PN +++ +IDA + A ++
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L++M G++P++++Y I R ++K+ + EEM + P+ VT+ TL+
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
G+ H Q L ++ +M K G N LI C+
Sbjct: 321 VGNFH---QALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 193/446 (43%), Gaps = 59/446 (13%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF---------- 307
+ II V G G + ++ DLR+ V ++IY + SL+ A + ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 308 --------------TLEVY--------------KNMQKLGVMADMASYNILLKACCLAGN 339
L VY +M+ GV D+ +YN L+ +C
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E+K A G D TY+ ++ V+ ++ + A++V ++M ++G P+ +
Sbjct: 307 YEEAAEVFEEMK---AAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+A A GL+++AM L +M++ G +P+ LL + + D A ++F
Sbjct: 363 TYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ Q + + + M N NFV K P T+N
Sbjct: 423 RVAGCQPNI-----CTFNALIKMH-------GNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI A G + A+ I + M +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++PD+ Y + R +Q+ + EMK + +PN +TY +LL A Y + EV
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA---YANGKEV 587
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELI 663
++ A+ ++++ + LK L+
Sbjct: 588 ERMSALAEEIYSGIIEPQAVLLKTLV 613
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 193/424 (45%), Gaps = 33/424 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ T++ G + ++E++R NI FN+L+ ++ + F ++V
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ ++ + D+ ++N LL + G + E+ G K ++ G + + T++T++
Sbjct: 454 FEEIKICECVPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLIS 509
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+ + ML AGVTP+ T+++++ A A GL EQ+ + EM C+P
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N LL A + +R AL E+ + K +
Sbjct: 570 NELTYCSLLHAYANGKEVER-------------MSALAEEIYSGIIEPQAVLLKTLVLVY 616
Query: 492 NTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYR------VKALMNEMRTVGL 544
+ + + + + + R F P TT N A + Y R ++N ++ G
Sbjct: 617 SKSDLLTETERAFLELREQGFSPDITTLN----AMVSIYGRRRMVSKTNEILNFIKDSGF 672
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ ++ L+ + + E + IL+ + GM PD++++ T I R+ R+K+A
Sbjct: 673 TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR 732
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EMK + + P+++TY T + + Y S + + V + M K K N LI+
Sbjct: 733 IFAEMKDFGLAPDVITYNTFI---ASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Query: 665 EWCE 668
+C+
Sbjct: 790 WFCK 793
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 182/395 (46%), Gaps = 30/395 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ ++ + PN+ +I + G G++++ ++E+++ +I +N+L+
Sbjct: 415 AMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V N D + + V+K M++ G + + ++N L+ A G A IY + +
Sbjct: 475 VFGQNGMDSEVS-GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY---RRMLDA 530
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV D+ TY+ ++ A W+ + KV +M PN +T+ SL++A AN VE+
Sbjct: 531 GVTP-DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYD 473
L EE+ EP + L+ ++ + +RAF R S L
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA--- 646
Query: 474 GNTDRISNMEHKDKQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYY- 530
+S + S TN NF+ +S F P+ TTYN LM T+++
Sbjct: 647 ----MVSIYGRRRMVSKTNEILNFIKDS---------GFTPSLTTYNSLMYMYSRTEHFE 693
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + ++ E+ G+ P+ IS+ +I A +G ++ A +I M++ G++PDV+ Y T I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+A + + M + +PN TY +L+
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLI 788
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 58/423 (13%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D+ K +P++Y T+I C Y ++ ++E++++ + + +N+L++V +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ +EV K M+ G + +YN L+ A G +L + + E+K K +K D
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDG--LLDEAM--ELKSQMVKKGIKPD 395
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VFTY+T++ F A+KV E+M AG PN T+++LI N G + M +FE
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
E+ C P+ N LL G+ +G +S +
Sbjct: 456 EIKICECVPDIVTWNTLL-------------------------AVFGQ--NGMDSEVSGV 488
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ K R F P T+N L+ A C + + A+ M
Sbjct: 489 FKEMK--------------------RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G++P+ ++ ++ A G E + ++L M++ P+ + Y + + K ++
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+ +L EE+ I+P V TL+ S+ L E ++ + ++ + G+ + T L
Sbjct: 589 RMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERA---FLELREQGFSPDITTLN 645
Query: 661 ELI 663
++
Sbjct: 646 AMV 648
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 54/351 (15%)
Query: 318 LGVMADMASYNIL--LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
L +D S++IL +K LA ++ V++ E + L + I+ V
Sbjct: 139 LNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASI-LSNSVVAVIISVLGK 197
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + D+ + GV + ++SLI A A+ G +A+ +F+++ + GC P
Sbjct: 198 EGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLIT 257
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N++L ++ W+ +I+ + K S
Sbjct: 258 YNVILNVYG---------KMGMPWS-----------------KIAGLVDSMKSS------ 285
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTI 553
P TYN L+ +C + Y + EM+ G SP+ +++
Sbjct: 286 --------------GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNA 331
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+D G S A+++LK M G +P +V Y + I R L +A L +M
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
I+P++ TY TLL + G + + V+++M AG + N LI+
Sbjct: 392 IKPDVFTYTTLLSGFEKTG---KDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ I+ +L V + K L RA+ ++ SP++ ++ + G
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I ++ T ++ +NSLM + + F + ++ + + G+ D+ S+N +
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V + M+
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFG----LAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 391 SAGVTPNTITWSSLIN 406
PN T++SLI+
Sbjct: 774 KNECKPNQNTYNSLID 789
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 235/566 (41%), Gaps = 63/566 (11%)
Query: 115 MVASGIVKSIREGRID--CVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
V+ +V + ID CV ++ K EL A E F + + R ++ GEVE
Sbjct: 199 FVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMRE----QPFSVYEFVMNRFMNKGEVE 254
Query: 173 MFVGLMEVLEE--FRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV----PRADIL-FC 225
M + + L + F L + ++ + + + + D+ +A Y +V P+ +++ F
Sbjct: 255 MGLRFHKALVQGGFGLDIITCNKILKGIWM---QNDIGVADDYFNMVVRIGPKPNVVTFS 311
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
+ + K+ +L A +D + +P++ + +ID G + + +
Sbjct: 312 TLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK 371
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ L++ F+S M+ V DL +++YK M G+ ++ S +IL+K C G + A
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEA 431
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ ++ L + + TYS ++ F + + + EDM+ P+TI +S
Sbjct: 432 CGLFVQILKLG----FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------- 456
LIN GLV A+ F + + G PN N LL + A +++
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 457 -RSWTLSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
++ T++ T + G G D M KD F
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKD------------------------F 583
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TY L+ C L + M ++P+ + +LI+ G++E AL
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALG 643
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + E G PDV + T I KRL A LF +M Q++PN +T+ L+ A
Sbjct: 644 LFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAN 655
R G + + + ++ M + G + N
Sbjct: 704 REGRMDDA---MLMFSKMLEEGPEPN 726
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 47/422 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL ++ Y SPN+ C +I G C G +++ ++ + +
Sbjct: 389 KIGDLGRVIQIYKRMLNEGISPNVVSCSILIK--GFCQNGRILEACGLFVQILKLGFEPS 446
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +++L+ + +L+ +Y++M K D Y++L+ C Q + G
Sbjct: 447 ILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLC-------KQGLVG 499
Query: 349 EVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + V L +VFT +T++ F K A+KV M + +T+T++ LI
Sbjct: 500 DALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN--SQCCNI-----LLQACVEACQFDRAFRLFRS 458
A G V++A+ LF +ML+ +P+ + C I L ++ C FD F
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFD-----FMC 614
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+A+ + + NM ++ FV KP T+
Sbjct: 615 KNAVAPDIAI-------YNVLINMHSREGHLEAALGLFVHVVERGP-------KPDVFTF 660
Query: 519 NILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N M C ++ R+ L +M + L PN I++TILIDA G ++ A+ + M
Sbjct: 661 NT-MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKML 719
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQA-FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G P++V Y+ I +S+ + ++ L+ EM I PN+V+Y L+ + G +
Sbjct: 720 EEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLM 779
Query: 635 HE 636
E
Sbjct: 780 KE 781
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 45/407 (11%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMKSRAIYEDLRS 284
+ F K +L Y+ K P+ + +I+ +C G+ GD ++ + +
Sbjct: 454 IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR---FFFQAVN 510
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ N++ N+L++ + ++VY M L + AD +Y IL+K G
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ K K DV TY T++ K L + + M V P+ ++
Sbjct: 571 ALMLFFQM----LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYN 626
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-- 460
LIN + G +E A+ LF +++ G +P+ N ++ + D A +LF T
Sbjct: 627 VLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSE 686
Query: 461 -LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + D R+ + + + P +P T
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGP-----------------EPNLVT 729
Query: 518 YNILMKACCTDYYRVKALM-------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ Y++ +++M NEM ++PN +S++ILID G ++ A
Sbjct: 730 YSCLIHG----YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCA 785
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + + PDV+AYT I+ + RL +A L++ M ++ P+
Sbjct: 786 FRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 31/393 (7%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+R Q ++ +V N MN +++ L +K + + G D+ + N +LK + +
Sbjct: 232 MREQPFSVYEFVMNRFMN--KGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIG 289
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+A + + V + K +V T+ST++ + A + + M GVTP+ I +
Sbjct: 290 VADDYFNMVVRIGPKP----NVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S LI+ AG +E L L G + + + + A V+ R ++++
Sbjct: 346 SILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM-- 403
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
L E N S + + + + F+P+ TY+ L
Sbjct: 404 ------LNEGISPNVVSCSIL----IKGFCQNGRILEACGLFVQILKLGFEPSILTYSAL 453
Query: 522 MKACCTD------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ C +Y L +M P+ I +++LI+ G V AL+
Sbjct: 454 IAGFCKSGNLRDGFY----LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAV 509
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+SP+V T + R K + A ++ M I+ + VTY L++ +++G
Sbjct: 510 NRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFG--- 566
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V + L ++ M K +K + LI+ C+
Sbjct: 567 RVDEALMLFFQMLKKDFKPDVITYCTLIDGLCK 599
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I +C + K + + L +D K+ +P++ I +I++ G + ++
Sbjct: 588 ITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVH 647
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +++ FN+++ N L ++++ M + + ++ IL+ A C G
Sbjct: 648 VVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGR 707
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ K LE + ++ TYS ++ F + LK+ +ML + PN
Sbjct: 708 MDDAMLMFS--KMLEEGP--EPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNI 763
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++S LI+ GL+++A F L P+ IL++ + + A L+ +
Sbjct: 764 VSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDN 823
Query: 459 WTLSK 463
L++
Sbjct: 824 MLLNR 828
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 173/387 (44%), Gaps = 56/387 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ ++L LR D S N T+I CG ++ + ++RS+ + N++
Sbjct: 172 RAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVH 231
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+++LMNV ++L L+VY+ M G ++ +YN L+ + G T +E +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLID---VYGKTGAWEEAIRVL 288
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LE +G+ ++ TY+T++ + Q AL++ E ML+AG P T+++LI+A
Sbjct: 289 DALERQGI-DPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGK 347
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +++A+ +F++M++ GCE N + L+ AC +A +++ A LFR
Sbjct: 348 NGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREM----------- 396
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
H + +P TYN L+ AC
Sbjct: 397 -------------HTE-----------------------GCRPNVVTYNSLIAACAQGAQ 420
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + + + +M+ G P+ +++ LI A +G+ AL + M+ PD V Y T
Sbjct: 421 WEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNT 480
Query: 589 AIKVCVRSKRL-KQAFSLFEEMKHYQI 614
+ ++ + Q F+ +H+++
Sbjct: 481 IVGALWKTGLVWAQIFTPPCRQEHFRL 507
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 161/373 (43%), Gaps = 61/373 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--------HDLKFTLEVYKNMQKLGVM 321
G +++ +++ LR + + ++Y + M L+ LE+ M+ G+
Sbjct: 168 GHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQ 227
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+ L+ C LA ++Y + + A+G ++ TY+T++ V+ W+
Sbjct: 228 CNVHTYSALMNVCIKGNELDLALDVY---RQMLAEGCTP-NLVTYNTLIDVYGKTGAWEE 283
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A++V + + G+ P T++++I AC +G ++A+ ++E ML AG +P + L+
Sbjct: 284 AIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALIS 343
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + + +L R+ + + V G + +
Sbjct: 344 A------YGKNGQLDRALQIFQDMVRRGCERN---------------------------- 369
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
TY+ L+ AC + L EM T G PN +++ LI AC
Sbjct: 370 -------------VITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACA 416
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
E A ++ + M+ G PD V + I R+ ++A + FE+MK + +P+ V
Sbjct: 417 QGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSV 476
Query: 620 TYITLLRARSRYG 632
Y T++ A + G
Sbjct: 477 VYNTIVGALWKTG 489
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 54/345 (15%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK--LDVFTYSTIVKVFADAKWWQ 380
D + LLK +G+ AQE++ ++ L+ L + TY+T++ + +
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M S G+ N T+S+L+N C ++ A+ ++ +ML GC PN N L+
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLI 272
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++ A R+ ++ ++Q I
Sbjct: 273 DVYGKTGAWEEAIRV--------------------------LDALERQGI---------- 296
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
P TYN ++ AC +AL M G P ++T LI A
Sbjct: 297 -----------DPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAY 345
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G +G ++ ALQI + M G +V+ Y++ I C ++ R + A LF EM +PN+
Sbjct: 346 GKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNV 405
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
VTY +L+ A ++ + Q+ +++ M G K + LI
Sbjct: 406 VTYNSLIAACAQGAQWEKAQE---MFEQMQHRGCKPDAVTFGGLI 447
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +GK A+R DA ++ P + T+I C + G ++ IYE
Sbjct: 266 VTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYER 325
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +L++ + L L+++++M + G ++ +Y+ L+ AC AG
Sbjct: 326 MLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGR 385
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA E++ E+ H E + +V TY++++ A W+ A ++ E M G P+ +
Sbjct: 386 WELALELFREM-HTEG---CRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAV 441
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
T+ LI A AG +A+ FE+M C P+S N ++ A
Sbjct: 442 TFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGA 484
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 517 TYNILMKAC--------CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TY+ LM C D YR +M G +PN +++ LID G +G E A+
Sbjct: 232 TYSALMNVCIKGNELDLALDVYR------QMLAEGCTPNLVTYNTLIDVYGKTGAWEEAI 285
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L + G+ P++ Y T I C S + ++A ++E M QP TY L+ A
Sbjct: 286 RVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISA- 344
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
YG ++ + L ++QDM + G + N LI CE
Sbjct: 345 --YGKNGQLDRALQIFQDMVRRGCERNVITYSSLISA-CE 381
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 60/286 (20%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NT+T++++I+ C + +A+ L EM G + N + L+ C++ + D A ++
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R +A G TPN V
Sbjct: 254 RQ------MLAEG----------------------CTPNLV------------------- 266
Query: 517 TYNILMKACCTDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQI 570
TYN L+ Y + A +R + G+ P ++ +I AC SG + AL+I
Sbjct: 267 TYNTLIDV----YGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRI 322
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M G P YT I ++ +L +A +F++M + N++TY +L+ A +
Sbjct: 323 YERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEK 382
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
G + L ++++M G + N LI +G +K Q
Sbjct: 383 AGRW---ELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQ 425
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 27/367 (7%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F +VY+ M GV ++ SYNIL++ C AGN + + E +E L +V TY
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEE---MERNRCLP-NVVTY 241
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + K A K+ M G+ PN +T++ +IN G +E+ + EM +
Sbjct: 242 NTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDR 301
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ N L+ + F +A L + L D T I+ M
Sbjct: 302 KGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML----RNGLPPDVVTYTSLINTM--CK 355
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRT 541
++ F H +P TY L+ K + YR+ +EM
Sbjct: 356 AGNLNRAMEFFDQMHVRGL------RPNGVTYTSLINGFSQKGFMDEAYRI---WDEMIR 406
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P +++ L++ SG +E A+ +L+ M G+SPDVV+Y+T I R + L +
Sbjct: 407 SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDR 466
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AF + EM + P+ +TY +L++ L+E ++Q+M ++
Sbjct: 467 AFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACD---LFQEMLNKSLLPDEFTYTS 523
Query: 662 LIEEWCE 668
LI +C+
Sbjct: 524 LINGYCK 530
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 195/482 (40%), Gaps = 82/482 (17%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI---YEDLR 283
+R F +L LR ++ +++ PN+ T+I G Y K + I ++ LR
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI------GAYCKLKRIDEAFKLLR 262
Query: 284 S---QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
S + + N+ +N ++N ++ T V M + G D +YN L+ C G
Sbjct: 263 SMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A ++ E+ + L DV TY++++ A A++ + M G+ PN
Sbjct: 323 NFHQALVLHSEM----LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T++SLIN + G +++A +++EM+++G P N LL + + + A L R
Sbjct: 379 VTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKRFSF 511
ME K +P+ V S Y D+ F
Sbjct: 439 -----------------------MEGKGL-----SPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 512 K---------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
P TY+ L++ C +A L EM L P+ ++T LI+
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCK 530
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++ AL + M + G PD V Y I + R ++A L ++ + + PN +T
Sbjct: 531 EGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590
Query: 621 YITLLRARSRY---------------GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
Y TL+ + S G ++E Q V++ M K K N+ +I
Sbjct: 591 YDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQ---VFESMIKRNQKPNEAVYNVIIHG 647
Query: 666 WC 667
C
Sbjct: 648 HC 649
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 214/520 (41%), Gaps = 60/520 (11%)
Query: 109 SMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDS 168
++L+ MV +G+ R GRI+ GVL +++ G AP DG + L N ++
Sbjct: 272 NLLTYNMVINGLC---RVGRIEETSGVLAEMDRKGFAP----DGVTYNTLVNGYCKV--- 321
Query: 169 GEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFV 228
G + L + LP PDV + + + +
Sbjct: 322 GNFHQALVLHSEMLRNGLP-----------------PDV--------------VTYTSLI 350
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
K +L A+ +D PN ++I+ G ++ I++++
Sbjct: 351 NTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP 410
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
I +N+L+N + + ++ + + + M+ G+ D+ SY+ ++ C A ++
Sbjct: 411 PTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
E + KGV D TYS++++ + + A + ++ML+ + P+ T++SLIN
Sbjct: 471 NAE---MVEKGV-SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLIN 526
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G + +A++L +EM++ G P++ N+L+ + + A RL ++ +
Sbjct: 527 GYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDES-I 585
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNI 520
G YD + S++E K ++ F + D+ F + KP YN+
Sbjct: 586 PNGITYDTLIESCSDIEFKSVVALIK--GFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA-LQILKIMRED 577
++ C D ++ L EM G P+ ++ L+ A G E L I I+R
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+S D +++ + + F+L EM P+
Sbjct: 704 KLS-DAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 510 SFKPTTTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P +YN ++ + C + + EM G+S N S+ ILI +GN+E
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
L+ + M + P+VV Y T I + KR+ +AF L M ++PNL+TY ++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
R G + E LA +M + G+ + L+ +C+
Sbjct: 282 GLCRVGRIEETSGVLA---EMDRKGFAPDGVTYNTLVNGYCK 320
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 35/334 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +PN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN D+ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + ++Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETNYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ +K +PN+VTY T+++ Y ++V++ + VY+ M +G KAN T L +++
Sbjct: 408 KRIKVDGFEPNIVTYGTMIKG---YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD-- 462
Query: 667 CEGVIQDKNQNQG---EVTLCRRTNSQRPQSLLL 697
G +D G E+ C Q+ +++LL
Sbjct: 463 ASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 164/430 (38%), Gaps = 82/430 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY +++ F + +GK + A R K SSPN+ +++ G G
Sbjct: 129 LRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYG--------------------EVKHLEAKGV------- 358
Y++++ AGN A++++ E + E +
Sbjct: 249 MYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRS 308
Query: 359 -LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ DV +Y+ ++K + A+ + AL V E+ML AGV P ++ L++A A +G+VEQA
Sbjct: 309 GIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M + P+ +L A V A + A + F+ + DG
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-----------DG--- 414
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKAL 535
F+P TY ++K A D ++ +
Sbjct: 415 ---------------------------------FEPNIVTYGTMIKGYAKANDVEKMMEV 441
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+MR G+ N T ++DA G + AL K M G+ PD A + +
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYST 501
Query: 596 SKRLKQAFSL 605
L +A L
Sbjct: 502 QDELDEAKEL 511
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LI A G GN GA ++L ++ + G SP+V++YT ++ R + A ++F
Sbjct: 138 SEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ VTY +L+ E ++ D K+ K +
Sbjct: 198 RRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 183/396 (46%), Gaps = 30/396 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILL 331
M+ R I DL + N+ +N F L V +D +K TL + ++ G + SY L+
Sbjct: 34 MELRGIQTDLVNLNILVN--CFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLI 91
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG T A ++ + L +++ +V YSTI+ K A + ML
Sbjct: 92 DGLCKAGETRAAMQVLRNIDGL----LVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLL 147
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++P+ IT+++L+ C G +++A+ LF +ML +P+ NIL+ + + +
Sbjct: 148 KRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKK 207
Query: 452 AFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R+ + ++ D Y+ D ++ ++K + FV N+ R
Sbjct: 208 A----RNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT------FVFNTM-----AR 252
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y++++ C +A L+ EM + ++PN ++++ LID SG +
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ M G DV+ Y + + ++ ++ +A +L ++K IQP++ TY L+
Sbjct: 313 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVD 372
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ G L + Q+ VYQ + GY + + K L
Sbjct: 373 GLCKNGRLKDAQE---VYQILLIKGYHLDSLFDKAL 405
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 148/362 (40%), Gaps = 34/362 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + ++ A Y SP++ T++ C I G ++ ++
Sbjct: 120 VMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQ 179
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ +IY FN L++ ++K V M K V D+ +YN L+ L
Sbjct: 180 MLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQ 239
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + +GV DV +YS ++ K A+ + ++M S + PNT+
Sbjct: 240 ENKATFVFNT---MARRGVTP-DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTV 295
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI+ +G + A L EM G + N LL A + Q D+A L
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355
Query: 460 TLSKTQVALGEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSHYSS-FDKRFSFKPTTTT 517
Q + Y D + N KD Q + + H S FDK S
Sbjct: 356 KDQGIQPDI-YTYTILVDGLCKNGRLKDAQEVYQIL-LIKGYHLDSLFDKALS------- 406
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+++M G +PN +++ ILI A + + A+++L+ M
Sbjct: 407 -----------------LLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449
Query: 578 GM 579
G+
Sbjct: 450 GL 451
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 169/414 (40%), Gaps = 59/414 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 185 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 244
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 245 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 300
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 361 TVMTAYANVGRVDEALALF--------------------DRM------------------ 382
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 383 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P L TY LL SR G Q ++ M K G+K ND L++ + +G
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQ---SIVSKMLKNGFKPNDQSYSLLLQCYAKG 544
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 192/434 (44%), Gaps = 41/434 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 469
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N Q ++LLQ A +E+ + + +F SW + +T V I+N
Sbjct: 530 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLV------------IANF 577
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + + + V K +KP +N ++ + Y + + + ++
Sbjct: 578 KCRRLEGVEKAFQEV---------KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIK 628
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ I++ L+D S A +ILK ++ + PDVV+Y T I + +K
Sbjct: 629 QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIK 688
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + EM + P +VTY TL+ Y SL + V M K + +
Sbjct: 689 EAQRILSEMIADGMAPCVVTYHTLVGG---YASLEMFNEAREVVNYMIHHNLKPMELTYR 745
Query: 661 ELIEEWCEGVIQDK 674
+++ +C+ D+
Sbjct: 746 RVVDSYCKAKRYDE 759
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 315
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 316 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 374
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 375 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 434
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T ++ M+ + +T N + +++ + ++FK
Sbjct: 435 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 630 RYG 632
+ G
Sbjct: 613 KNG 615
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 165/422 (39%), Gaps = 59/422 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVT 288
GKK + L + + +PN T++ VCG G DY+ + ++S V
Sbjct: 401 LGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTR--VLNGMKSCGVE 458
Query: 289 LNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L+ +N+L++ + ++Y M G + +YN LL G+ AQ I
Sbjct: 459 LSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSI 518
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ K K + +YS +++ +A +++++ + P+ + +L+
Sbjct: 519 VSKM----LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVI 574
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A +E F+E+ G +P+ N +L + + +A +F S
Sbjct: 575 ANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI------- 627
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--A 524
KQS P TYN LM A
Sbjct: 628 --------------------KQS--------------------GLSPDLITYNSLMDMYA 647
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV
Sbjct: 648 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 707
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + + +A + M H+ ++P +TY ++ + + E ++ L+
Sbjct: 708 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Query: 645 QD 646
D
Sbjct: 768 SD 769
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 560 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 679 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 734
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 735 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 792
Query: 451 R 451
R
Sbjct: 793 R 793
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR-LKQAFSLFEE 608
++T ++ A +G E ALQ+ +R G+ P +V Y + V R R + +L EE
Sbjct: 182 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
M+ ++P+ T T++ A R G L Q +A ++D+ G+
Sbjct: 242 MRAAGVEPDDFTASTVIAACGRDGLL---DQAVAFFEDLKARGH 282
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 149 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 208
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ P +VTY +L R G + +A+ ++M AG + +D
Sbjct: 209 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAGVEPDD 251
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 141/668 (21%), Positives = 267/668 (39%), Gaps = 94/668 (14%)
Query: 59 LLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVAS 118
L S R+ LS Y + KDGR+EE +V+ + K + ++ VA
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--------KETGDIVVDEVAY 327
Query: 119 GIVKS--IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVG 176
G++ + + GR+D V ++ + G+ + LF + L G +E
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIH-VNLF------VYNTMINGLCKLGRMEEVQK 380
Query: 177 LMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPR-----ADILFCNFVREF 231
+++ +E+ + + I C + + A ++ R + + ++ F
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYC-REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
+ ALR + K +PN C T++D G ++ ++++ ++ + N+
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN+++N + E+ M++L D +Y L C G A + +
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 350 VKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++HL A V + F + AK W + +M + G++PN +T+ +LI
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFI-----AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G + +A +L+ EM+ G PN C+ L+ + + D A + +
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674
Query: 461 ------LSKTQVALGEDYDGNTDRISNMEH------------KDKQSITNT---PNFVP- 498
+ K + DGN + M + D +S+ + F+P
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 499 NSHYSSF----------DKRFSFK---------PTTTTYNILMKACCTD--YYRVKALMN 537
N YSS D+ FS + P TYN L+ C R L N
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
++++ G+SPN I++ LID G A ++ + M E+G+ P V+ Y+ I
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQG 854
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM---------W 648
+++A L ++M + PN +TY TL+ + G++ E+ + +Y +M W
Sbjct: 855 YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK---LYDEMHIRGLLPTNW 911
Query: 649 KAGYKAND 656
+K +D
Sbjct: 912 IGNWKRSD 919
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 68/378 (17%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVM 321
C D ++A+ E++ + +N+ ++++M+ D + LE ++Q+ G+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE---SLQRKGLS 285
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y +L+K C G A+ + VK ++ G + +D Y ++ +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERV---VKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A +V+ +M AG+ N ++++IN G +E+ + +EM G P+ N L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+AF + R
Sbjct: 403 GYCREGSMRKAFEMCRMMV----------------------------------------- 421
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILID 556
R TT TYN L+K C+ D R+ LM + G++PN IS + L+D
Sbjct: 422 ------RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR---GVAPNEISCSTLLD 472
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E AL + K G++ +V+ + T I + R+ +A L + MK + P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 617 NLVTYITLLRARSRYGSL 634
+ +TY TL + G L
Sbjct: 533 DSLTYRTLFDGYCKLGQL 550
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 166/397 (41%), Gaps = 31/397 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y D V+ ++ + + +A L L V+ M K+G + S N LL +
Sbjct: 140 VYRDFTFSAVSFDLLL---RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ +A +YG+++ GVL D FT + + K + A++ E+M G+ N
Sbjct: 197 GDPGMAAMVYGQMR---IAGVLP-DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + ++++ G E A + E + + G PN +L++ + + + A R+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 458 ----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + +VA G +G R M+ D + N H + F
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQR-GRMD--DATRVRNEMRDA-GIHVNLF-------- 360
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN ++ C V+ ++ EM VG+ P+ S+ LID G++ A ++
Sbjct: 361 ---VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++M +G++ + Y T +K + A L+ M + PN ++ TLL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + +Q L ++++ G N +I C+
Sbjct: 478 G---KTEQALNLWKETLARGLAKNVITFNTVINGLCK 511
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 175/435 (40%), Gaps = 29/435 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+ID G C G K+ + + + +N+L+ + H + L
Sbjct: 392 PDKYSYNTLID--GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M K GV + S + LL AG T A ++ E A+G+ K +V T++T+
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL---ARGLAK-NVITFNTV 505
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A ++ + M P+++T+ +L + G + A HL +M G
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDY-----DGNTDRISN 481
P+ + N + A Q+ + + + LS V G +GN N
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY----NI-LMKACCTDYYRVKALM 536
+ + + N F+ ++ S F K NI ++ C + +
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685
Query: 537 NEMRTVGLSPNH---ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + T+ H + W ++I SG + A + + +R PD Y++ I C
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S + +AFSL + M + PN++TY +L+ + G L + + ++ + G
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL---SRAVNLFNKLQSKGIS 802
Query: 654 ANDTYLKELIEEWCE 668
N LI+E+C+
Sbjct: 803 PNGITYNTLIDEYCK 817
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDA 557
H + + F+F + ++++L++A D ++ + +N M VG P+ S L++
Sbjct: 136 HLAEVYRDFTF--SAVSFDLLLRAH-ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ A + MR G+ PD K R R+ QA EEM+ ++ N
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
LV Y ++ G + ++ L Q + G N L++ +C+
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQ---RKGLSPNVVTYTLLVKGYCK 300
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 169/414 (40%), Gaps = 59/414 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 185 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 244
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 245 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 300
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 361 TVMTAYANVGRVDEALALF--------------------DRM------------------ 382
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 383 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P L TY LL SR G Q ++ M K G+K ND L++ + +G
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQ---SIVSKMLKNGFKPNDQSYSLLLQCYAKG 544
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 192/434 (44%), Gaps = 41/434 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 469
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N Q ++LLQ A +E+ + + +F SW + +T V I+N
Sbjct: 530 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLV------------IANF 577
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + + + V K +KP +N ++ + Y + + + ++
Sbjct: 578 KCRRLEGVEKAFQEV---------KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIK 628
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ I++ L+D S A +ILK ++ + PDVV+Y T I + +K
Sbjct: 629 QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIK 688
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + EM + P +VTY TL+ Y SL + V M K + +
Sbjct: 689 EAQRILSEMIADGMAPCVVTYHTLVGG---YASLEMFNEAREVVNYMIHHNLKPMELTYR 745
Query: 661 ELIEEWCEGVIQDK 674
+++ +C+ D+
Sbjct: 746 RVVDSYCKAKRYDE 759
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 315
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 316 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 374
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 375 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 434
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T ++ M+ + +T N + +++ + ++FK
Sbjct: 435 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 630 RYG 632
+ G
Sbjct: 613 KNG 615
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 165/422 (39%), Gaps = 59/422 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVT 288
GKK + L + + +PN T++ VCG G DY+ + ++S V
Sbjct: 401 LGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTR--VLNGMKSCGVE 458
Query: 289 LNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L+ +N+L++ + ++Y M G + +YN LL G+ AQ I
Sbjct: 459 LSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSI 518
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ K K + +YS +++ +A +++++ + P+ + +L+
Sbjct: 519 VSKM----LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVI 574
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A +E F+E+ G +P+ N +L + + +A +F S
Sbjct: 575 ANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI------- 627
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--A 524
KQS P TYN LM A
Sbjct: 628 --------------------KQS--------------------GLSPDLITYNSLMDMYA 647
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV
Sbjct: 648 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 707
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + + +A + M H+ ++P +TY ++ + + E ++ L+
Sbjct: 708 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Query: 645 QD 646
D
Sbjct: 768 SD 769
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 560 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 679 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 734
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 735 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 792
Query: 451 R 451
R
Sbjct: 793 R 793
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR-LKQAFSLFEE 608
++T ++ A +G E ALQ+ +R G+ P +V Y + V R R + +L EE
Sbjct: 182 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
M+ ++P+ T T++ A R G L Q +A ++D+ G+
Sbjct: 242 MRAAGVEPDDFTASTVIAACGRDGLL---DQAVAFFEDLKARGH 282
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 149 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 208
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ P +VTY +L R G + +A+ ++M AG + +D
Sbjct: 209 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAGVEPDD 251
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 205/485 (42%), Gaps = 43/485 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPR-----------------ADIL-FCNFVREFGKKR 235
EF V +C N N+ I + C + R D++ + V + +
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 354
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 411
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 412 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 520
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 695
Query: 651 GYKAN 655
G A+
Sbjct: 696 GLAAD 700
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 253 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 426
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +EM +QP +VT+ L+ +G L + ++ L M G N T L+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW---MLAKGIAPNATTFNSLV 603
Query: 664 EEWC 667
+++C
Sbjct: 604 KQYC 607
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 34/294 (11%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILL----QACVEACQFDRAFRLFRS----WTLSK 463
GL+ +A +FE+ML G + CN+ L + C + FR F W ++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 464 TQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNS-------HYSSFDK------- 507
+ + + RI H + TP+ + S + DK
Sbjct: 249 YNIVI--HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 508 --RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R KP + Y ++ C + +EM G+ P+ + +T LID G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + M ++PDV+ YT I + + +A LF EM ++P+ VT+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L+ + G + + V+ M +AG N LI+ C EG + N+
Sbjct: 427 LINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 155/375 (41%), Gaps = 51/375 (13%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M G + + +Y LL++ C A A+ ++ + + A+G +VF+YS ++
Sbjct: 40 YNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF---RGMAAQGC-SPNVFSYSILIA 95
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ +M+ G PN +T+ SL++ G +++A+ LF M+ GC P
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N+L+ + A+RLF E +K I
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFE-------------------------EMLEKGCIP 190
Query: 492 NTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKACC--TDYYRVKA 534
F NS S F ++ F P T+N L+ C D
Sbjct: 191 TV--FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EMR++G P+ +S+ L+ G A ++L+ M G+ PD+V+Y I
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+S L A LF E+ ++P+ +Y T++ R G +V V++DM G
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG---KVGAAFVVFKDMIANGSAP 365
Query: 655 NDTYLKELIEEWCEG 669
+ + L+ C G
Sbjct: 366 DAAVVIPLVIGLCRG 380
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +++ + F KK D+ A R ++ + P ++ +++ G++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ Q NI+ FN+L++ D+ ++ M+ LG D+ SYN L++ C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G AQ + ++ + GV D+ +Y+ ++ ++ + A+K+ ++ +G+
Sbjct: 274 SKGKPHEAQRL---LREMIRSGV-GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P+ ++S++I+ AG V A +F++M+ G P++ +++ + C+ +R
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA---VVIPLVIGLCRGER 382
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++++ L+ A +G + + +ML AGC PN+ LL++ +A +F+ A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R P
Sbjct: 76 RGMAAQGCS-----------------------------------------------PNVF 88
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+Y+IL+ C +A L+NEM G PN +++ L+ G ++ A+ + M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G PD V Y I + + +A+ LFEEM P + TY +LL SR G
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
VQ ++++DM + G N L++ +C+
Sbjct: 209 GRVQ---SLFKDMLRQGCVPNIFTFNNLLDGFCK 239
>gi|298709629|emb|CBJ31438.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 762
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 180/411 (43%), Gaps = 31/411 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEV 311
P+ +I G + +S + +D+R V N + FN+ + A + + +
Sbjct: 325 PDPKTYSAVITASGKAKKWEESLRLLDDMREVGVEPNCHNFNAAIASCGVARQWQRAVGL 384
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ ++SYN + AC + V A + GE++ A GV + + TY ++
Sbjct: 385 LGEMKGGGLELGLSSYNAAILACATSARGVEASALLGEMR---AAGV-EPNAATYLPVIT 440
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A W+ +L +M + G+ PN+ ++++I AC +A E+A+ + EM AG +
Sbjct: 441 ACGKAGMWEQSLVHLREMTAQGLAPNSPIYTAVITACGHAKEWEKALEILAEMPAAGVKA 500
Query: 432 NSQCCNILLQACVEACQFDRAFRLFR--------SWTLSKTQVALGE-DYDGNTDRISNM 482
+ N L AC A Q + A L S S Q A+ +G D +
Sbjct: 501 SVYHYNTALDACDRAAQGEAAVVLLHDMDGPPGVSPNPSSYQSAMSACGSEGRVDLALEL 560
Query: 483 EHKDKQSITNTPNFVPNS--HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
+ K + T P P+S + S+ S P + + + K L+ E R
Sbjct: 561 LEEVKAASTTRPELAPSSKLYASALQACVSSPPDGS-----------NARKAKELLEEAR 609
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G++ N S+ I A +G V+ AL L M++ G++P+V++Y+ + + +
Sbjct: 610 GAGIALNWRSYNCAIIAAAKAGEVDEALARLAEMKDAGLTPNVMSYSWILPALASRELWE 669
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +L EE+K Y + Y ++ A S G EV V +DM AG
Sbjct: 670 ESLALVEEIKGYGLLRTPFAYSVVVAAHSAAGRWEEV---CGVLEDMIAAG 717
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 177/428 (41%), Gaps = 30/428 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++ + + K R AL + PN Y + I CG + ++ + E
Sbjct: 32 FMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAIKACGSKKRWREALELLER 91
Query: 282 LR---SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
R + ++ Y ++ + N+ + LE+ + ++ G SY + AC
Sbjct: 92 RREDLGEGSPVDEYSLSAAIYACGNSGETGKVLELLEELKVGGKTPHPFSYTAAISACGD 151
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G +++ +++ + +DV+ T + A + W+ ALK+ +ML A +
Sbjct: 152 SGMGDKVMQLFEDMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEMLDA-LPA 210
Query: 397 NTITWSSLIN---------ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
N+ + +N AC AG + ++ L +EM P S C +Q+CV
Sbjct: 211 NSDAPEANLNLDALRDASLACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNK 270
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q++RA L TL+ V E Y + S + P +
Sbjct: 271 QWERATSLIDEMTLTYGMVPDLETY------------QVAISAAGCASLWPKATKMLRQM 318
Query: 508 RF-SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
R +P TY+ ++ A + L+++MR VG+ PN ++ I +CG +
Sbjct: 319 RQNGLQPDPKTYSAVITASGKAKKWEESLRLLDDMREVGVEPNCHNFNAAIASCGVARQW 378
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ +L M+ G+ + +Y AI C S R +A +L EM+ ++PN TY+ +
Sbjct: 379 QRAVGLLGEMKGGGLELGLSSYNAAILACATSARGVEASALLGEMRAAGVEPNAATYLPV 438
Query: 625 LRARSRYG 632
+ A + G
Sbjct: 439 ITACGKAG 446
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
++ F Y++ + A A+ W+ AL + + M + G+ PN+ SS I AC + +A+
Sbjct: 28 RITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAIKACGSKKRWREALE 87
Query: 420 LFE---EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQV 466
L E E L G + + + AC + + + L ++ +
Sbjct: 88 LLERRREDLGEGSPVDEYSLSAAIYACGNSGETGKVLELLEELKVGGKTPHPFSYTAAIS 147
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVP----NSHYSSFDKRFSFKPTTTTYNILM 522
A G+ G D++ + +Q+ T F+ + ++ K +K Y ++
Sbjct: 148 ACGDS--GMGDKVMQLFEDMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEML 205
Query: 523 KACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + +A +N +R L ACG +G+ + +L++L MR ++
Sbjct: 206 DALPANSDAPEANLNLDALRDASL------------ACGRAGDWKASLKLLDEMRAVAIT 253
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRA 627
P+ Y A++ CVR+K+ ++A SL +EM Y + P+L TY + A
Sbjct: 254 PESGCYKAAMQSCVRNKQWERATSLIDEMTLTYGMVPDLETYQVAISA 301
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN I +I CG ++ K+ I ++ + V ++Y +N+ ++ A + +
Sbjct: 464 APNSPIYTAVITACGHAKEWEKALEILAEMPAAGVKASVYHYNTALDACDRAAQGEAAVV 523
Query: 311 VYKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----HLEAKGVLKLDVF 364
+ +M GV + +SY + AC G LA E+ EVK E KL
Sbjct: 524 LLHDMDGPPGVSPNPSSYQSAMSACGSEGRVDLALELLEEVKAASTTRPELAPSSKLYAS 583
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
V D + A ++ E+ AG+ N +++ I A A AG V++A+ EM
Sbjct: 584 ALQACVSSPPDGSNARKAKELLEEARGAGIALNWRSYNCAIIAAAKAGEVDEALARLAEM 643
Query: 425 LQAGCEPNSQCCNILLQA 442
AG PN + +L A
Sbjct: 644 KDAGLTPNVMSYSWILPA 661
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNS--LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K++ + E+ R + LN +N + A ++ L M+ G+ ++ SY+ +L
Sbjct: 600 KAKELLEEARGAGIALNWRSYNCAIIAAAKAGEVDEALARLAEMKDAGLTPNVMSYSWIL 659
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A + L +E V+ ++ G+L+ F YS +V + A W+ V EDM++
Sbjct: 660 PALA---SRELWEESLALVEEIKGYGLLRTP-FAYSVVVAAHSAAGRWEEVCGVLEDMIA 715
Query: 392 AGVT 395
AGV
Sbjct: 716 AGVA 719
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 220/509 (43%), Gaps = 55/509 (10%)
Query: 221 DILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
+++F N + + + KK DL A R ++ K P + +ID G C G +
Sbjct: 239 NVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALID--GFCKAGKFQVVDQ 296
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLK 332
+ ++ + +N+ VFNS+++ K+ L E+ + M ++G D+ +YNIL+
Sbjct: 297 LLNEMNVMGLNVNVKVFNSIIDAK---YKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A+E K + L + F+Y+ ++ + + MA + +
Sbjct: 354 FSCSGGRIKEAEEFLERAK----ERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAET 409
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ +++ + I+ G ++ A+ + E+M++ G P++Q N+L+ + +F A
Sbjct: 410 GDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAA 469
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--- 509
++ L E D N++ T F+ N+ + F
Sbjct: 470 ------------KLLLSEMLD------LNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
P YN+++K C A+ +N+M+ +P+ + + +ID ++
Sbjct: 512 MSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDL 571
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL++ M + P+VVAYT+ I + + +A +F M+ + ++PN+VTY L
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLC 684
+ S+ G + ++ + ++ M NDT LI N TL
Sbjct: 632 IGGFSKTG---KPEKAASFFELMLMNNCLPNDTTFHYLINGL---------TNITNTTLL 679
Query: 685 RRTNSQRPQSLLLEKVAVHLQKSAAENLA 713
N + +SL+L+ A + + ++ +A
Sbjct: 680 IEKNEENDRSLILDFFATMISEGWSQVIA 708
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 84/231 (36%), Gaps = 49/231 (21%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
++ + G VE+ L ++ GC PN N+++ + RA R+F L
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLK- 269
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
F PT TY L+
Sbjct: 270 ----------------------------------------------GFLPTLETYGALID 283
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + V L+NEM +GL+ N + +IDA G V+ A +++++M E G P
Sbjct: 284 GFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEP 343
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
D+ Y I R+K+A E K + PN +Y L+ A + G
Sbjct: 344 DITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQG 394
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 130/348 (37%), Gaps = 37/348 (10%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV----FTYSTIVKVFADAKWWQMAL 383
N LL G +A E+Y K LE G LD+ ++ +VK D +
Sbjct: 168 NSLLNCLVKNGKVDVACELYD--KMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGR 225
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K+ +D G PN + ++ +I+ G +++A +FEE+ G P + L+
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF 285
Query: 444 VEACQF---------------DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+A +F + ++F S +K + L D + + M +
Sbjct: 286 CKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGL---VDKAAEMMRMMTEMGCE 342
Query: 489 SITNTPNFVPN-----------SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
T N + N + K + P +Y LM A C DY +
Sbjct: 343 PDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDM 402
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ ++ G P+ +S+ I G ++ AL + + M E G+ PD Y + +
Sbjct: 403 LFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 462
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
R A L EM +QP+ Y TL+ R L + + V
Sbjct: 463 KGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 122/313 (38%), Gaps = 49/313 (15%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ YS+++K+ + + V EDM + P +S+I A G V++A+ +
Sbjct: 91 LNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKM 150
Query: 421 FEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
F + + C P N LL V+ + D A L+ L D D +
Sbjct: 151 FYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKM--------LERGGDHGLDLV 202
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---KALM 536
D SI I++K C D +V + L+
Sbjct: 203 V-----DNYSIV----------------------------IVVKGLC-DVGKVEEGRKLI 228
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
++ G PN + + ++ID G+++ A ++ + ++ G P + Y I ++
Sbjct: 229 DDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKA 288
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ + L EM + N+ + +++ A+ +YG + + + + + +M G + +
Sbjct: 289 GKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEM---GCEPDI 345
Query: 657 TYLKELIEEWCEG 669
T LI C G
Sbjct: 346 TTYNILINFSCSG 358
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 175/418 (41%), Gaps = 56/418 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I+ G + + + D+ + N+ ++ ++ A D+ LE+
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++M G++ D Y L+ C + + + E+ + LK D Y+ ++
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG----LKPDHVAYTALIN 345
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A +VKE+M + + NT T+ +LI+ G +E+A LF EM G +P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ Q N L++ + ++A+ L +E K +
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELL-------------------------IEIKKE---- 436
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTDYYRVKALMNEMRTVGLSPNHIS 550
N N++ I+ C C D R L EM + GL PN +
Sbjct: 437 ---NLTANAYMCG--------------AIVNGLCHCGDLTRANELFQEMISWGLKPNIVI 479
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T ++ G E A++IL +M++ G+SPDV Y T I ++ ++++ S EM
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++PN+ TY + R G E+Q + +M +G ND +LI+ +C+
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAG---EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 184/423 (43%), Gaps = 40/423 (9%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK + N Y+C I++ CGD ++ +++++ S + NI ++ +++ + +F
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+++ M+ G+ D+ YN ++ C AG +E + + AKG LK +V+T
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM---EEGKSYLVEMIAKG-LKPNVYT 549
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y + + A Q A + +ML +G+ PN + + LI+ G +A F ML
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--- 482
G P+ Q ++L+ + + A +F S L K V D T ISN+
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVF-SELLDKGLVP---DVFTYTSLISNLCKE 665
Query: 483 --------EHKDKQSITNTPNFVP-NSHYSSFDK---------RFSFKP------TTTTY 518
H D PN V N+ + K F P + TY
Sbjct: 666 GDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ ++ C +A L + M+ VG+ P+ + LID C +GN E AL + M E
Sbjct: 726 STIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G++ A+ I + +L +A+ L E+M I PN VTY L+ G++ E
Sbjct: 786 EGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKE 844
Query: 637 VQQ 639
+Q
Sbjct: 845 AEQ 847
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 194/451 (43%), Gaps = 69/451 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ + + ++ +A R++ +PN IC +ID G C D ++A +
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLID--GYCKDGNTTKAFAK------ 604
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ M GV+ D+ ++++L+ L+ N L QE
Sbjct: 605 -------------------------FRCMLDQGVLPDVQTHSVLIHG--LSKNGKL-QEA 636
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
G L KG++ DVFTY++++ + A ++ +DM G+ PN +T+++LIN
Sbjct: 637 MGVFSELLDKGLVP-DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL----- 461
G + +A LF+ + + G NS + ++ ++ AF+LF L
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 462 -SKTQVAL--GEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S AL G GNT++ +S ++ I +TP F + D F
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAF-----NALIDGFFKLGKLIEA 810
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y L+ +M ++PNH+++TILI+ GN++ A Q+ M++
Sbjct: 811 YQ---------------LVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ P+V+ YT+ + R R + FSLF+EM I+P+ + + ++ A + G+
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW--- 912
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + DM G LI+ C+
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCK 943
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 168/390 (43%), Gaps = 25/390 (6%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ + +++ +N+T N Y+ +++N H DL E+++ M G+ ++ Y ++
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K G A +I G +K +G L DVF Y+T++ F A + +M++
Sbjct: 485 KGLVKEGRFEEAIKILGVMKD---QG-LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIA 540
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN T+ + I+ AG ++ A F EML +G PN C L+ + +
Sbjct: 541 KGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTK 600
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFS 510
AF FR Q L D ++ I + K Q DK
Sbjct: 601 AFAKFRCML---DQGVL-PDVQTHSVLIHGLSKNGKLQEAMGV-------FSELLDK--G 647
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY L+ C D L ++M G++PN +++ LI+ G + A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + E G++ + V Y+T I +S L +AF LF MK + P+ Y L+
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ G+ ++ L+++ M + G + +
Sbjct: 768 CKAGN---TEKALSLFLGMVEEGIASTPAF 794
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 166/385 (43%), Gaps = 39/385 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++ +L + + +++ + SL++ DLK E++ +M K G+ ++ +Y
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G A+E++ + KG+ + V TYSTI+ + + A ++
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPE---KGLARNSV-TYSTIIAGYCKSANLTEAFQLFH 746
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M GV P++ + +LI+ C AG E+A+ LF M++ G ++ N L+ +
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLG 805
Query: 448 QFDRAFRLFRSW-----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ A++L T + + +Y I E +
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL----------------F 849
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILID 556
KR + P TY L+ Y R+ +L +EM G+ P+ ++W++++D
Sbjct: 850 MEMQKR-NVMPNVLTYTSLLHG----YNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A GN AL+++ M +G++ YT I + L + + +E++ +
Sbjct: 905 AHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKL 964
Query: 617 NLVTYITLLRARSRYGSLHEVQQCL 641
+L T TL+ R G E + L
Sbjct: 965 SLATCGTLVCCFHRAGRTDEALRVL 989
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASY 327
G +++ + ED+ ++T N + L+ + ++K +++ MQK VM ++ +Y
Sbjct: 805 GKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LL G E++ + A+G+ K D +S +V W ALK+ +
Sbjct: 865 TSLLHGYNRIGRR---SEMFSLFDEMVARGI-KPDDLAWSVMVDAHLKEGNWIKALKLVD 920
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DMLS GV ++ LI+A + + + + +E+ + G + + C L+ A
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAG 980
Query: 448 QFDRAFRLFRS 458
+ D A R+ S
Sbjct: 981 RTDEALRVLES 991
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 24/390 (6%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+TLN ++ + H L + + LG D SY L+ C G T A E+
Sbjct: 141 ITLNTFIKGFCLKGQIHQ---ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALEL 197
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ ++ K +++LDV YSTI+ K A + +M+S ++ N +T+S+LI+
Sbjct: 198 ---LRRVDGK-LVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G ++ A+ LF +M P+ NIL+ A + + A K +
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA----------KNGL 303
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
A+ D ++ D + N N + S ++ R T +YNI++ C
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEVN-MAKSILNTMSHR-GVTATVRSYNIVINGFC 361
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A L EM + PN I++ LID SG + AL+++ +M + G PD++
Sbjct: 362 KIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDII 421
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y++ + ++ + +A +L ++K I+PN+ TY L+ + G L + + ++
Sbjct: 422 TYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN---IF 478
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+D+ GY +I+ +C + D+
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQGFCSHGLFDE 508
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 164/396 (41%), Gaps = 62/396 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ R + LR D L ++ + TIID +C D + A +Y ++ S+ ++
Sbjct: 189 GETRAALELLRRVDGKLVQL---DVVMYSTIID--SMCKDKNVNDAFDLYSEMVSRRISS 243
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI +++L++ LK + ++ M + D+ ++NIL+ A C G +E
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR---VKEAK 300
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + +G+ K D+ TY++++ + MA + M GVT +++ +IN
Sbjct: 301 NGLAMMMKQGI-KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+V+QAM LF+EM PN N L+ ++ + A L
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL------------ 407
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
I M + +Q P TY+ ++ A C
Sbjct: 408 -----------IDLMHDRGQQ------------------------PDIITYSSILDALCK 432
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
++ + AL+ +++ G+ PN ++TILID G +E A I + + G + V
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
YT I+ +A SL +MK P+ +TY
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITY 528
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 153/394 (38%), Gaps = 59/394 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K +++ A Y S N+ +I I G + ++
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASYNILLKACCLA 337
+ S+N+ ++Y FN L V+A + ++ KN M K G+ D+ +YN L+ CL
Sbjct: 271 MTSENINPDVYTFNIL--VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+A+ I + H +GV V +Y+ ++ F K A+K+ ++M + PN
Sbjct: 329 NEVNMAKSILNTMSH---RGVTA-TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPN 384
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++SLI+ +G + A+ L + M G +P+ + +L A + D+A L
Sbjct: 385 VITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL- 443
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ KD+ +P T
Sbjct: 444 ------------------------IKLKDQ----------------------GIRPNMYT 457
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ C + + ++ G + ++T++I G + AL +L M+
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ PD + Y I +A L EM
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y+ V +L +M G+ PN +++ ILI+ G + A +L + + G PD + T
Sbjct: 86 YHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNT 145
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
IK ++ QA + +++ + V+Y TL+ + G
Sbjct: 146 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ F K + + A++ + PN+ ++ID G+C G + + + + +
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID--GLCKSGRISYALELIDLMHDR 414
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+I ++S+++ H + + + ++ G+ +M +Y IL+ C G A
Sbjct: 415 GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + L KG L V TY+ +++ F + AL + M P+ IT+
Sbjct: 475 RNIFED---LLVKGY-NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 404 LINACANAGLVEQAMHLFEEMLQAG 428
+I + + ++A L EM+ G
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRG 555
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 214/531 (40%), Gaps = 100/531 (18%)
Query: 102 GNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNE 161
G ++ + L+ + I R R + + +L+ + +G+ P DG +
Sbjct: 62 GEAREWGTELNEVSYNTAISACARRDRFEEALRLLRDMPSVGLVP----DGWSYGATLGA 117
Query: 162 CQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD 221
C +G+ + L+ +EE + + + + C +K N A ++ R++
Sbjct: 118 CA---GTGQASTALRLLREMEERGIEATASNYKHALYACCDSKTGENWEA-AAALLRRSE 173
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
L NF +G+ +I C G + K+ + +
Sbjct: 174 TLRNNFF--YGR----------------------------VIMACRRAGQWQKALEVLRE 203
Query: 282 LRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + +I+ ++++++V K ++ + K GV + SYN++L AC
Sbjct: 204 MSRVGLAPDIFCYDTVISVACMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKK 263
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGV 394
AG A + ++ + G DV +Y+T + + W++AL V DM + +
Sbjct: 264 AGRPRQAVSL---LRAMRGHGC-SPDVISYNTAISACVKRREWELALFVLRDMQRPDSRL 319
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT ++ S+I CA G V+QA+ LF+EM +AG + V+A ++
Sbjct: 320 EPNTYSYGSVITVCATCGEVDQAVGLFDEMPEAGVK-------------VDAFTYN---- 362
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
VA+ DG + +Q+I+ + H
Sbjct: 363 ----------SVAMAYARDG----------RWRQAISTLSDMSELGHVGD---------- 392
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y ++AC + R +L+ EMR G+ PN ++ I ACG G E L++L
Sbjct: 393 VVSYTAAIRACGWAGECDRALSLLREMREEKGVKPNEKTFAAAISACGHGGRWERGLELL 452
Query: 572 KIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
M R G PD YT+AIK C + + +QAF+L E P+ TY
Sbjct: 453 SEMPRSTGFLPDADCYTSAIKACGKGGQWEQAFTLLREAAAEGTTPDAKTY 503
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 165/377 (43%), Gaps = 58/377 (15%)
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
H L++ L + +++ LG+ ++ S + L AC AG E+ GE + +
Sbjct: 15 HSLRWREALGLLYHIRALGITPNVKSVSAALNACGQAGQWQRCLELLGEAREWGTE---- 70
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ +Y+T + A ++ AL++ DM S G+ P+ ++ + + ACA G A+ L
Sbjct: 71 LNEVSYNTAISACARRDRFEEALRLLRDMPSVGLVPDGWSYGATLGACAGTGQASTALRL 130
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EM + G E + L AC + SKT GE+++ +
Sbjct: 131 LREMEERGIEATASNYKHALYACCD----------------SKT----GENWEAAAALL- 169
Query: 481 NMEHKDKQSITNTPNF------VPNSHYSSFDK---------RFSFKPTTTTYNILMKAC 525
++S T NF + + K R P Y+ ++
Sbjct: 170 ------RRSETLRNNFFYGRVIMACRRAGQWQKALEVLREMSRVGLAPDIFCYDTVISVA 223
Query: 526 C-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + + L+ E G+ + IS+ +++ AC +G A+ +L+ MR G S
Sbjct: 224 CMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKKAGRPRQAVSLLRAMRGHGCS 283
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH--YQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV++Y TAI CV+ + + A + +M+ +++PN +Y +++ + G EV
Sbjct: 284 PDVISYNTAISACVKRREWELALFVLRDMQRPDSRLEPNTYSYGSVITVCATCG---EVD 340
Query: 639 QCLAVYQDMWKAGYKAN 655
Q + ++ +M +AG K +
Sbjct: 341 QAVGLFDEMPEAGVKVD 357
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ +R +G++PN S + ++ACG +G + L++L RE G + V+Y TAI C
Sbjct: 24 GLLYHIRALGITPNVKSVSAALNACGQAGQWQRCLELLGEAREWGTELNEVSYNTAISAC 83
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
R R ++A L +M + P+ +Y L A + G + L + ++M + G +
Sbjct: 84 ARRDRFEEALRLLRDMPSVGLVPDGWSYGATLGACAGTG---QASTALRLLREMEERGIE 140
Query: 654 ANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLA 713
A + K + C+ + + L RR+ + R + +V + +++ A
Sbjct: 141 ATASNYKHALYACCDS--KTGENWEAAAALLRRSETLR-NNFFYGRVIMACRRAGQWQKA 197
Query: 714 ID-LRGLTKV 722
++ LR +++V
Sbjct: 198 LEVLREMSRV 207
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 210/472 (44%), Gaps = 54/472 (11%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-------------------AKWW 379
N + + +++ +G L L Y+T++ FA+ A
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGL----YTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNM 306
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL + E+M GV+PN + ++ +++ A G A ++E+M+ AG +P+ NIL
Sbjct: 307 AKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNIL 366
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A +A + D+A + + ++ + E Y D + K
Sbjct: 367 VHAFCKAGRMDKALGVLENIEANRLLPTI-ETYTSILDGYVKGGNIQKA----------- 414
Query: 500 SHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
FD K +P +YN L+ A + ++NEM G+ P+ +T L
Sbjct: 415 --LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALT 472
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G+VE A + + M+++ ++ D+VAY +K C S + A +F+++ ++
Sbjct: 473 EGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLK 532
Query: 616 PNLVTYITLLR-ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
N +TY T+L A +R G + E ++ ++ M + G K + LI +
Sbjct: 533 HNQITYCTMLDGAYARAGRVEEAEELVSA---MERDGTKPDTLIYNSLINAY 581
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 59/379 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMAS 326
G+ K+ I E++ V+ N ++ +M+ A FT +V+++M G+ D+
Sbjct: 303 AGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI 362
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNIL+ A C AG + G ++++EA +L + TY++I+ + Q AL+V
Sbjct: 363 YNILVHAFCKAGRM---DKALGVLENIEANRLLPT-IETYTSILDGYVKGGNIQKALEVF 418
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ + +AG+ P ++++SL++ A A +E A + EML G P+ + L +
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART 478
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++AF +F+ + K +A+
Sbjct: 479 GDVEKAFGVFQR--MKKENLAI-------------------------------------- 498
Query: 507 KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID-ACGGSGN 563
Y L+KACC + + ++ GL N I++ ++D A +G
Sbjct: 499 -------DIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGR 551
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM---KHYQIQPNLVT 620
VE A +++ M DG PD + Y + I S R + +L +M Q +P++ T
Sbjct: 552 VEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT 611
Query: 621 YITLLRARSRYGSLHEVQQ 639
Y TL++ ++ G + ++
Sbjct: 612 YNTLIQVYAQAGFIPRAEE 630
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 59/398 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
++ AL + KH SPN I I+D GD+ + ++ED+ S + +I ++N
Sbjct: 305 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYN 364
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L++ A + L V +N++ ++ + +Y +L GN A E++ +K
Sbjct: 365 ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK-- 422
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
L+ V +Y++++ A A+ + A + +ML+ GV P+ +++L A G
Sbjct: 423 --TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGD 480
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGE 470
VE+A +F+ M + + LL+AC + A +F+ T L Q+
Sbjct: 481 VEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCT 540
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG R +E ++
Sbjct: 541 MLDGAYARAGRVEEAEE------------------------------------------- 557
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG---MSPDVVAYT 587
L++ M G P+ + + LI+A G SG E +L M + PD+ Y
Sbjct: 558 ----LVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYN 613
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
T I+V ++ + +A LF+ + ++ P+ T+ L+
Sbjct: 614 TLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 651
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP Y +L+ A D +A MR + PN +T LI A + ++EGA+
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+ + + + I + + A FE+ K + P + Y ++++A
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ G++ V+ LA M + G++ N
Sbjct: 248 QAGNMETVEALLA---QMEEEGFQGN 270
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A L+ E ++ +++ GV + + N LL G LA EIYGEV +G +
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV----VRGGI 253
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+L+V+T + +V + ++ + DM GV + +T+++LINA GLVE+A
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L G EP N +L + ++DRA + + Q+ L + +
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA----KDVLIEMLQLGLTPNAATYNTLL 369
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN-- 537
+ +D N + R P +++ L+ + + +ALM+
Sbjct: 370 VEICRRD--------NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR 421
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+++ +TILID +G + AL++ M G DVV Y T + + K
Sbjct: 422 EMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK 481
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
A LF EM + P+ T+ TL+R + G++ + L +++ M + K +
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM---DKALNLFEAMVRTNLKPDKV 538
Query: 658 YLKELIEEWCE 668
LI+ +C+
Sbjct: 539 TYNTLIDGFCK 549
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M +LG+ + A+YN LL C N + AQEI+ E+ +GVL D+ ++S++
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR---RGVLP-DLVSFSSL 403
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A AL +M +G+ P+ + ++ LI+ G + A+ + +EML GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
+ N L + F A LF + T + G DGN D+ N
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC 526
+ ++ N+ F K R P +Y ++ C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +AL ++M G+ PN ++ LI SG++ A + L M +G+ PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+Y T I ++ L++AF L EM+ +Q N++TY +L G + E +Q L
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 166/400 (41%), Gaps = 35/400 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
IY ++ + LN+Y N ++N D KF + +M+ GV AD+ +YN L+ A C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G L +E + + ++G ++ + TY+ I+ + A V +ML G+T
Sbjct: 304 REG---LVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+++L+ + +A +F+EM + G P+ + L+ +A
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
FR S L + + N ++ +D+ R
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-----------------ARG 462
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F TYN + C + L NEM G+ P+ ++T LI GN++ A
Sbjct: 463 CFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + + M + PD V Y T I ++ + +A L+++M I P+ ++Y T+L
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G L E L + M + G + N LI+ +C
Sbjct: 582 FCSSGLLPEA---LNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 59/400 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
F + + + L AL + ++ P+ I +ID G C + S A+ ++
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID--GFCRNGALSDALKMRDE 457
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ +++ +N+ +N F ++ M + G++ D ++ L++ C GN
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + + LK D TY+T++ F A A ++ +DM+ + P+ I
Sbjct: 518 MDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +++N ++GL+ +A++L ++ML+ G PN CN L++ + +A+
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY---- 629
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
LSK ISN +P+S +YN
Sbjct: 630 -LSKM--------------ISN-------------GIIPDSF---------------SYN 646
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + KA L+NEM GL N I++ ++++ G ++ A Q+L+ M E
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++PD Y++ I V +K+AF +EM + P+
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 179/396 (45%), Gaps = 35/396 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++++ I++++ + V ++ F+SL+ V N H L L ++ M++ G++ D Y I
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH-LYQALMHFREMERSGIVPDNVIYTI 437
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G A ++ E + A+G +DV TY+T + K + A + +M
Sbjct: 438 LIDGFCRNGALSDALKMRDE---MLARGCF-MDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ P+ T+++LI G +++A++LFE M++ +P+ N L+ +A +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---TPNFVPNSHYSSFD 506
RA L+ D I +H ++ N + +P + + D
Sbjct: 554 GRAKELWDDMI--------------RKDIIP--DHISYGTVLNGFCSSGLLPEA-LNLCD 596
Query: 507 KRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ +P T N L+K C D + +++M + G+ P+ S+ LID
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E A ++ M + G+ +++ Y + ++++A + +M I P+ TY
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+L+ + S +++ + +M + G +D +
Sbjct: 717 SLING---HVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y +V+ + AK + + + + GV+ + + L+ G V+ A ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N NI++ A + +F+ +S+ME K
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFF-----------------------LSDMEGK 286
Query: 486 DKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
+ T N + N++ +SF R +P TYN ++ C Y R
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDR 345
Query: 532 VKALMNEMRTVGLSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
K ++ EM +GL+PN ++ T+L++ C N+ A +I M G+ PD+V++++ I
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEIC-RRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
V R+ L QA F EM+ I P+ V Y L+ R G+L +
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R + K ++ AL ++A + P+ T+ID G C G+ +++ +++D
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID--GFCKAGEMGRAKELWDD 562
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +++ + + +++N ++ L L + M + G+ ++ + N L+K C +G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 340 TVLAQE--------------------IYGEVKH------------LEAKGVLKLDVFTYS 367
A E I G +K +E +G L+ ++ TY+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYN 681
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F Q A +V M+ G+ P+ T+SSLIN + +++A +EMLQ
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 742 GLVPDDR 748
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 188/440 (42%), Gaps = 65/440 (14%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
P+ Y T+I G+CG + A+ +D+ + ++ + L+ K +
Sbjct: 150 PDTYTYNTLIR--GLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ G D+ +YN+++ C G A E +K L + G + + +Y+ +
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEF---LKSLPSYGC-EPNTVSYNIV 263
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W+ A K+ +M G PN +T++ LI+ GLVE AM + +++ + GC
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PNS N +L A F + ++ R+ + V+ G
Sbjct: 324 TPNSLSYNPILHA------FCKQKKMDRAMAFVELMVSSG-------------------- 357
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P +YN L+ A C + L+++++ G +P
Sbjct: 358 ---------------------CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
IS+ +ID +G E AL++L M G+ PD++ Y+T R R+++A F
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC 456
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ I+PN V Y +L + + H + ++ M G N++ LIE
Sbjct: 457 KVQDMGIRPNTVLYNAILLGLCKRRATHSA---IDLFTYMVSNGCMPNESTYTILIEGLA 513
Query: 668 -EGVIQDKNQNQGEVTLCRR 686
EG++++ + E LC R
Sbjct: 514 YEGLVKEAREMMAE--LCSR 531
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 45/376 (11%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ SYN ++ C+ G + L A ++ D +TY+T+++ A
Sbjct: 119 DVMSYNAMVAGYCVTGQ-------LDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNA 171
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L V +DML G P+ +T++ L+ A +QA+ L +EM GC P+ N+++
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALG----EDYDGNTDRISNMEHKDKQSI 490
+ + D A +S T+S V G E ++ ++ M K +
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP-- 289
Query: 491 TNTPNFVPNSHYSSF--------------DK--RFSFKPTTTTYNILMKACCTDYY--RV 532
PN V + SF D+ ++ P + +YN ++ A C R
Sbjct: 290 ---PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 346
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A + M + G P+ +S+ L+ A G V+ A+++L +++ G +P +++Y T I
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 406
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ + ++A L EM +QP+++TY T+ R G + E + QDM G
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM---GI 463
Query: 653 KANDTYLKELIEEWCE 668
+ N ++ C+
Sbjct: 464 RPNTVLYNAILLGLCK 479
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 226 NFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDL 282
N + F +R LV A+ D K+ +PN I+ C RA+ E +
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILH--AFCKQKKMDRAMAFVELM 353
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S +I +N+L+ ++ +E+ ++ G + SYN ++ AG T
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A E+ E + KG L+ D+ TYSTI + A+K + G+ PNT+
Sbjct: 414 EEALELLNE---MVTKG-LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++++ A+ LF M+ GC PN IL++
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ L+ + T + +N++++ A + LE+ M G+ D+ +Y+ + C
Sbjct: 384 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLC 443
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + + +V+ + ++ + Y+ I+ + A+ + M+S G
Sbjct: 444 REGRIEEAIKAFCKVQDMG----IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN T++ LI A GLV++A + E+ G
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 188/436 (43%), Gaps = 42/436 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 337 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 396 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571
Query: 503 SSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F TYN ++K C D + +MN M G S N +
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 631
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 632 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ PN VTY L+ Y ++ ++ + M ++G + N LI
Sbjct: 692 VDDGLCPNEVTYTALIDG---YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG---- 744
Query: 670 VIQDKNQNQGEVTLCR 685
+ +N G LC+
Sbjct: 745 -LTKQNNFSGAEELCK 759
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 186/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 488 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 546
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + L ++ TY+ ++
Sbjct: 547 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGLFTNIVTYNEMI 602
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 603 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 662
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 663 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 714
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 715 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 870
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 217/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 440
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 441 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 490
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 491 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 521
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 522 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 581
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G+ ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 582 VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRG-HSANLVTYNTII 637
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 745
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 866 MIKAGCQPTLWTYGVLIKG 884
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 688
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 749 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 865 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 923
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 924 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 984 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 1043
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 1044 VLIDGLLRDG 1053
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+K+C + R + ++ + GL +++ L+ G + M +G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P+++ Y I + + A ++ +++ ++ P+ TY +++ R H++
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK---HDLD 437
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L V+ M K G + N LI C+
Sbjct: 438 SALQVFNQMAKEGCEPNTVTYSTLINGLCD 467
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 205/472 (43%), Gaps = 54/472 (11%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M + G+ D+ ++N L+KA C A A + +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 208
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + + GV D T++T+++ F + + AL+VK ML G +P +T + LIN
Sbjct: 209 EEMSSSGVAP-DETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCK 267
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + + A ++ V G
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM------DVMVQEGH 321
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N +R P TT+N L+ A
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILN-----------QMVERGCL-PDITTFNTLIVA 369
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C+ R++ ++ R V GLSP+ ++ ILI+A G+ + AL++ + M+ G +P
Sbjct: 370 LCSGN-RLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I +L +A L +EM+ + VTY T++ + + E ++
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE-- 486
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGE-VTLCRRTNSQRPQSLL--- 696
V+ M G N LI+ C + I D NQ + ++ + N+ S+L
Sbjct: 487 -VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHY 545
Query: 697 -----LEKVAVHLQKSAAENLAID-------LRGLTKVEARIIVLAVLRMMK 736
++K A LQ A +D + GL K + L +LR M+
Sbjct: 546 CKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 163/372 (43%), Gaps = 32/372 (8%)
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N ++N L+ + M + G + D+ ++N L+ A C +GN + +E
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC-SGNRL--EEAL 380
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + KG L DV+T++ ++ Q+AL++ E+M S+G TP+ +T+++LI+
Sbjct: 381 DLARQVTLKG-LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKT 464
+ G + +A+ L +EM AGC ++ N ++ + + + A +F L S+
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ DG RI + Q I+ +P TYN ++
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISE-----------------GLQPNNITYNSIL 542
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + ++ M G + +++ LI+ +G + AL++L+ MR GM
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR 602
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
AY I+ R + A +LF EM P+ TY + R R G +++
Sbjct: 603 ATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG--SIREA 660
Query: 641 LAVYQDMWKAGY 652
+M G+
Sbjct: 661 FDFLLEMVDKGF 672
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 174/412 (42%), Gaps = 43/412 (10%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMAS 326
D MK + ++R + + + V +S + A F V + +L G+ AD
Sbjct: 95 DLMK--VLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVV 152
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN LL L + +Y E+ +G+ K DV T++T++K A + A+ +
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGE---RGI-KPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M S+GV P+ T+++L+ G ++ A+ + ML+ GC P N+L+
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING---Y 265
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPN-FVPNSHYSS 504
C+ R ED G + I+N D+ + N N H
Sbjct: 266 CKLGRV-----------------EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 505 FDK------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
K + P TYNI++ C + K ++N+M G P+ ++ LI
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A +E AL + + + G+SPDV + I + + A LFEEMK P
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ VTY TL+ SL ++ + L + ++M AG + +I+ C+
Sbjct: 429 DEVTYNTLI---DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 131/337 (38%), Gaps = 52/337 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E+++S T + +N+L++ + L L+
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 507
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + + M G E
Sbjct: 508 DGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE 567
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R RI M
Sbjct: 568 VDVVTYGTLINGLCKAGRTQVALKLLRGM------------------RIKGMRA------ 603
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P ++ F T N L EM VG P+ +
Sbjct: 604 ------TPKAYNPVIQSLFRRNNTRDAMN---------------LFREMTEVGEPPDAFT 642
Query: 551 WTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ I+ C G G++ A L M + G P+ ++
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSF 679
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +++ S + +N++++
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A ++ + + ++G
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL---ISQMISEG 530
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + + M + G + +T+ +LIN AG + A
Sbjct: 531 -LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVA 589
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ L M G + N ++Q+ A LFR T +GE D T
Sbjct: 590 LKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT------EVGEPPDAFTY 643
Query: 478 RI 479
+I
Sbjct: 644 KI 645
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 186/434 (42%), Gaps = 62/434 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
K L A + KK + PN + +I+ G C + RA + ++++ + N
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLIN--GFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++++++ K ++++ M + G M ++ +YN LL C G L E Y
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG---LMDEAYE 252
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L+ D F+Y T++ MALKV ED + P+ + +S+LI
Sbjct: 253 LLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG +++A LFE+M + CEP+ L+ C+ DR L + Q L
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG---LCKGDR---------LQEAQQVL 359
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-----------DKRFSFK----- 512
ME ++ TPN + YSS D + FK
Sbjct: 360 -----------ETMEDRN-----CTPNVI---TYSSLIDGLCKTGQVRDAQEVFKRMIVR 400
Query: 513 ---PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TYN L+ C AL M EM G P+ I++ LID +G A
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M+ +PDV+ Y+ I + +R+ A +LF++M + P++VT+ TL+
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 628 RSRYGSLHEVQQCL 641
G + + ++ L
Sbjct: 521 YCNAGLVDDAERLL 534
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 163/385 (42%), Gaps = 66/385 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ ++ID G+C G ++ +++ + + + N+ +NSL++ + +
Sbjct: 368 TPNVITYSSLID--GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M G + D+ +YN L+ C G A ++G++K AK DV TYS
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AK-FCNPDVITYSC 481
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + MA + +DML V P+ +T+S+L+ NAGLV+ A L EEM+ +
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + A R+ + Q
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ----------------------- 578
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVG 543
P TY L+ A C T YR L+ EM G
Sbjct: 579 ------------------------PNVVTYTALIDAFCRAGKPTVAYR---LLEEMVGNG 611
Query: 544 LSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ LI G+G++E A +IL ++ R++ D+ AY + R+ R+ A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
L E +K P Y+ L+R
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRG 696
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 155/367 (42%), Gaps = 62/367 (16%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+T N++ + ++ + DL E+ + M++ G + D A YN ++ A C A NT A
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + + +E + +V T++ ++ A A M G PN T++
Sbjct: 114 LDYF---RSMECEK----NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNV 166
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LIN V +A L +EM ++G PN + ++ + D A++LFR
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR------ 220
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
Q + N PN V TYN L
Sbjct: 221 ------------------------QMVENGCMPNLV-------------------TYNTL 237
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + +A L++EMR GL P+ S+ L+ +G ++ AL++ +
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVAY+T I ++ RL +A LFE+M+ +P++VT+ L+ + L E QQ
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 640 CLAVYQD 646
L +D
Sbjct: 358 VLETMED 364
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 193/449 (42%), Gaps = 35/449 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IY 279
+ + + F ++ + +A + + ++ PN+ T++ G+C + + A +
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS--GLCRNGLMDEAYELL 254
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++R + + + + +++LM + L+V+++ D+ +Y+ L+ C A
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A +++ +++ + + DV T++ ++ Q A +V E M TPN
Sbjct: 315 GRLDEACKLFEKMR----ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+SSLI+ G V A +F+ M+ G EPN N L+ D A L
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Query: 458 SWTLSKTQ---VALGEDYDG--NTDRI--SNMEHKDKQSITNTPNFVPNS---------- 500
T + + DG T R +N D ++ P+ + S
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490
Query: 501 ----HYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
+ FD + + P T++ L++ C A L+ EM SP+ ++T
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D G + A ++LK M + G P+VV YT I R+ + A+ L EEM
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+QPN++TY +L+ G L E ++ L
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKIL 639
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V+TY+ + + A+ + ++ G+TPN T++ +I +G +++A L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG--NTDRI 479
EEM ++G P++ N ++ A +A +A FRS K + DG +R+
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMN 537
++++ K+ + P TYN+L+ C + +R L+
Sbjct: 143 PE----------------ATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLK 185
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ GL+PN ++++ +I V+ A ++ + M E+G P++V Y T + R+
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +A+ L +EM+ +QP+ +Y TL+ + G ++ L V++D
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG---KIDMALKVFED 291
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 199/485 (41%), Gaps = 75/485 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNA 302
+PN++ +I G+C GD K+ + E++R + ++N +++ A
Sbjct: 56 TPNVFTYAVVIQ--GLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 303 HDLKFTLEVYKN--------------------------MQKLGVMADMASYNILLKACCL 336
D ++E KN M+K G + + +YN+L+ C
Sbjct: 114 LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
Y +K ++ G L +V TYST++ F A K+ M+ G P
Sbjct: 174 VHKV---HRAYLLLKEMKESG-LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 229
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++L++ GL+++A L +EM + G +P+ + L+ + + D A ++F
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 457 RSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH------- 501
+ ++ + + G G D + K +++ + P+ V +
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN-SCEPDVVTFTALMDGLCK 348
Query: 502 ----------YSSFDKRFSFKPTTTTYNILMKACC-TDYYR-VKALMNEMRTVGLSPNHI 549
+ + R + P TY+ L+ C T R + + M G+ PN +
Sbjct: 349 GDRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI + V+ AL +++ M G PD++ Y T I ++ R +A LF +M
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE- 668
K P+++TY L+ + L + ++ DM K + L+E +C
Sbjct: 468 KAKFCNPDVITYSCLIGG---FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 524
Query: 669 GVIQD 673
G++ D
Sbjct: 525 GLVDD 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 209/497 (42%), Gaps = 48/497 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL+ ++ + P++ T+I G+C G ++ ++E +R + ++ F +L
Sbjct: 285 ALKVFEDNSNGDCPPDVVAYSTLI--AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTAL 342
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
M+ L+ +V + M+ ++ +Y+ L+ C G AQE++ K +
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF---KRMIV 399
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G+ + +V TY++++ F AL + E+M + G P+ IT+++LI+ G
Sbjct: 400 RGI-EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALG 469
+A LF +M C P+ + L+ + + D A LF T L
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
E Y N + + E ++ + + P TY L+ C
Sbjct: 519 EGY-CNAGLVDDAERLLEEMVAS-----------------DCSPDVYTYTSLVDGFCKVG 560
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V+A ++ M G PN +++T LIDA +G A ++L+ M +G+ P+V+ Y
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ I + L++A + E ++ + + ++ Y ++ R G + L + +
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA---LELLEA 677
Query: 647 MWKAGYKANDTYLKELIEEWCEGVIQDKNQN-QGEVTLCRRTNSQRPQSLLLEKVAVHLQ 705
+ ++G LI C+G K E+TL R++ RP + E V L
Sbjct: 678 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS---RPNAEAYEAVIQELA 734
Query: 706 KSA----AENLAIDLRG 718
+ A LA +L G
Sbjct: 735 REGRHEEANALADELLG 751
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + V F K +V A R K PN+ +ID G + + E++
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNT 340
V N+ + SL+ DL+ ++ + +++ ADM +Y +++ C G
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTI 399
A E+ +K ++ + D+ Y +++ K A++V E+M LS PN
Sbjct: 669 SAALELLEAIK--QSGTPPRHDI--YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 724
Query: 400 TWSSLINACANAGLVEQAMHLFEEML 425
+ ++I A G E+A L +E+L
Sbjct: 725 AYEAVIQELAREGRHEEANALADELL 750
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A L+ E ++ +++ GV + + N LL G LA EIYGEV +G +
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV----VRGGI 253
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+L+V+T + +V + ++ + DM GV + +T+++LINA GLVE+A
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L G EP N +L + ++DRA + + Q+ L + +
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA----KDVLIEMLQLGLTPNAATYNTLL 369
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN-- 537
+ +D N + R P +++ L+ + + +ALM+
Sbjct: 370 VEICRRD--------NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR 421
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+++ +TILID +G + AL++ M G DVV Y T + + K
Sbjct: 422 EMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK 481
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
A LF EM + P+ T+ TL+R + G++ + L +++ M + K +
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM---DKALNLFEAMVRTNLKPDKV 538
Query: 658 YLKELIEEWCE 668
LI+ +C+
Sbjct: 539 TYNTLIDGFCK 549
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M +LG+ + A+YN LL C N + AQEI+ E+ +GVL D+ ++S++
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR---RGVLP-DLVSFSSL 403
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A AL +M +G+ P+ + ++ LI+ G + A+ + +EML GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
+ N L + F A LF + T + G DGN D+ N
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC 526
+ ++ N+ F K R P +Y ++ C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +AL ++M G+ PN ++ LI SG++ A + L M +G+ PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+Y T I ++ L++AF L EM+ +Q N++TY +L G + E +Q L
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 166/400 (41%), Gaps = 35/400 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
IY ++ + LN+Y N ++N D KF + +M+ GV AD+ +YN L+ A C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G L +E + + ++G ++ + TY+ I+ + A V +ML G+T
Sbjct: 304 REG---LVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+++L+ + +A +F+EM + G P+ + L+ +A
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
FR S L + + N ++ +D+ R
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-----------------ARG 462
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F TYN + C + L NEM G+ P+ ++T LI GN++ A
Sbjct: 463 CFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + + M + PD V Y T I ++ + +A L+++M I P+ ++Y T+L
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G L E L + M + G + N LI+ +C
Sbjct: 582 FCSSGLLPEA---LNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 59/400 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
F + + + L AL + ++ P+ I +ID G C + S A+ ++
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID--GFCRNGALSDALKMRDE 457
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ +++ +N+ +N F ++ M + G++ D ++ L++ C GN
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + + LK D TY+T++ F A A ++ +DM+ + P+ I
Sbjct: 518 MDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +++N ++GL+ +A++L ++ML+ G PN CN L++ + +A+
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY---- 629
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
LSK ISN +P+S +YN
Sbjct: 630 -LSKM--------------ISN-------------GIIPDSF---------------SYN 646
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + KA L+NEM GL N I++ ++++ G ++ A Q+L+ M E
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++PD Y++ I V +K+AF +EM + P+
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 179/396 (45%), Gaps = 35/396 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++++ I++++ + V ++ F+SL+ V N H L L ++ M++ G++ D Y I
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH-LYQALMHFREMERSGIVPDNVIYTI 437
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G A ++ E + A+G +DV TY+T + K + A + +M
Sbjct: 438 LIDGFCRNGALSDALKMRDE---MLARGCF-MDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ P+ T+++LI G +++A++LFE M++ +P+ N L+ +A +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---TPNFVPNSHYSSFD 506
RA L+ D I +H ++ N + +P + + D
Sbjct: 554 GRAKELWDDMI--------------RKDIIP--DHISYGTVLNGFCSSGLLPEA-LNLCD 596
Query: 507 KRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ +P T N L+K C D + +++M + G+ P+ S+ LID
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E A ++ M + G+ +++ Y + ++++A + +M I P+ TY
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+L+ + S +++ + +M + G +D +
Sbjct: 717 SLING---HVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y +V+ + AK + + + + GV+ + + L+ G V+ A ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N NI++ A + +F+ +S+ME K
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFF-----------------------LSDMEGK 286
Query: 486 DKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
+ T N + N++ +SF R +P TYN ++ C Y R
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDR 345
Query: 532 VKALMNEMRTVGLSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
K ++ EM +GL+PN ++ T+L++ C N+ A +I M G+ PD+V++++ I
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEIC-RRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
V R+ L QA F EM+ I P+ V Y L+ R G+L +
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R + K ++ AL ++A + P+ T+ID G C G+ +++ +++D
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID--GFCKAGEMGRAKELWDD 562
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +++ + + +++N ++ L L + M + G+ ++ + N L+K C +G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 340 TVLAQE--------------------IYGEVKH------------LEAKGVLKLDVFTYS 367
A E I G +K +E +G L+ ++ TY+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYN 681
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F Q A +V M+ G+ P+ T+SSLIN + +++A +EMLQ
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 742 GLVPDDR 748
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 231/554 (41%), Gaps = 71/554 (12%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 24 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 82
Query: 193 EEFRIVQLC-VNKPDVNLAIRYACIV----PRADILFCNFVREFGKKRDLVSALRAYDAS 247
I LC K + I I P + FC + + ++ ++ AL D
Sbjct: 83 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT-FCLLIEGYCREHNMGRALELLDEM 141
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--L 305
+K P+ +I+ C D + + E + + N+ V+++L+ A + +
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ + M GV D+ YN ++ AG +E + ++ +G LK D T
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGRG-LKPDAVT 257
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ + ++ A K ++ML G+ PN ++ LIN AG + +A+ +F +
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+ Q C+ + ++ + A ++F E K
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS-------------------------ELK 352
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+K + P TY+ L+ C KA L +EM G
Sbjct: 353 EKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++PN + L+D SG+++ A ++ M E G+ PD V Y+T I +S+ + +AF
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
SLF EM +QP+ Y L+ + G ++++ + ++++M + G+ A LI
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKGF-ATTLSFNTLI 506
Query: 664 EEWCEGV-IQDKNQ 676
+ +C+ IQ+ +Q
Sbjct: 507 DGYCKSCKIQEASQ 520
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 162/388 (41%), Gaps = 73/388 (18%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++++ LGV+ D+ +
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 445 NVAEAFSLFHEMPSKGVQ------------------------------------------ 462
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 463 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 516
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA-----------------FSLFEE 608
A Q+ + M + PD V YTT I ++ ++++A F+LFE+
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
M ++P+ VTY ++ A + +L E
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVE 604
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 194/490 (39%), Gaps = 83/490 (16%)
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
L I+ + P A + F F+ + K + A + +D H PN + +I+
Sbjct: 244 LEIQGRGLKPDA-VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302
Query: 269 CGDYMKSRAIYEDLRSQNV-----TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMAD 323
G+ M++ +I+ L + V T + ++ L N + L+V+ +++ G++ D
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE---ALKVFSELKEKGLVPD 359
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y+ L+ C G A E++ E + KG+ ++F Y+ +V + Q A
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDE---MCLKGIAP-NIFIYNALVDGLCKSGDIQRAR 415
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K+ + M G+ P+++T+S++I+ + V +A LF EM G +P+S N L+ C
Sbjct: 416 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ ++A LFR
Sbjct: 476 CKEGDMEKAMNLFREM-------------------------------------------- 491
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F+ TT ++N L+ C L EM + P+H+++T +ID +
Sbjct: 492 -LQKGFA---TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547
Query: 562 GNVEGALQILKIMRE-----------------DGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
G +E A + K M+E G+ PD V Y I + L +AF
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L +E+ + + L+ A + L E + L +M + G K + L+
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL---DEMGELGLKPSLAACSTLVR 664
Query: 665 EWCEGVIQDK 674
+ E D+
Sbjct: 665 SFHEAGKMDE 674
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 190/426 (44%), Gaps = 68/426 (15%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 381
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E M S GV
Sbjct: 442 KSENVAEAFSLFHE---------------------------------------MPSKGVQ 462
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P++ +++L++ C G +E+AM+LF EMLQ G + N L+ ++C+ A +L
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQL 521
Query: 456 FRSWT--------LSKTQVALGEDYDGNTDRI--SNMEHKDKQSITNTPNFVPNSHYSSF 505
F+ ++ T V D+ ++ +N+ K+ Q N + ++ ++ F
Sbjct: 522 FQEMIAKQIMPDHVTYTTVI---DWHCKAGKMEEANLLFKEMQE----RNLIVDTVFALF 574
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
+K + KP TY +++ A C + V+A L +E+ G+ +LI A
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M E G+ P + A +T ++ + ++ +A +FE +K + P+ T
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694
Query: 622 ITLLRA 627
I L+
Sbjct: 695 IDLVNG 700
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 144/351 (41%), Gaps = 56/351 (15%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G++ + +Y I+ C A A+ + E++ K LK D S ++ F
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDGFM 56
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
L++K+ M+S G+ N IT++ LI+ G +E+A + + M+ GC+PNS+
Sbjct: 57 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+L++ RA L + ME +
Sbjct: 117 TFCLLIEGYCREHNMGRALEL-----------------------LDEMEKR--------- 144
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
N VP++ +Y ++ C D L+ +M GL PN + ++
Sbjct: 145 NLVPSA---------------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI G +E A ++L M G++PD+ Y I ++ ++++A + E++
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++P+ VT+ + S+ G + E + + +M G N+ LI
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAK---YFDEMLDHGLMPNNPLYTVLI 297
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 193/453 (42%), Gaps = 69/453 (15%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++ P+ Y T+I G+CG A + +D+ + ++ + L+
Sbjct: 141 DAARRLVADMPMEPDSYTYNTLIR--GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198
Query: 299 NVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
K +++ M+ G D+ +YN+++ C G A E +K L +
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF---LKSLPSH 255
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + + +Y+ ++K A+ W+ A K+ +M G PN +T++ LI+ GLVE
Sbjct: 256 GC-EPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEP 314
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
AM + +++ + GC PNS N +L A + + DRA F +S+
Sbjct: 315 AMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSR------------- 360
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
P +YN L+ A C +
Sbjct: 361 ---------------------------------GCYPDIVSYNTLLTALCRGGEVDAAVE 387
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+++++ G +P IS+ +ID +G + AL++L M G+ PD++ Y+T
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R R+++A F +++ I+PN V Y +L + E + ++ M G
Sbjct: 448 REDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR---RETHNAIDLFIYMISNGCMP 504
Query: 655 NDTYLKELIEEWC-EGVIQDKNQNQGEVTLCRR 686
N++ LIE EG++++ + GE LC R
Sbjct: 505 NESTYTILIEGLTYEGLVKEARELLGE--LCSR 535
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 172/422 (40%), Gaps = 61/422 (14%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG----------- 348
V DL+ L + ++M L A L+K C +G T A+ +
Sbjct: 70 VRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNA 129
Query: 349 ------------EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ L A ++ D +TY+T+++ AL V +DML G P
Sbjct: 130 MVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP 189
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T++ L+ A +QAM L +EM GC P+ N+++ + + D A
Sbjct: 190 DVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFL 249
Query: 457 RSW--------TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+S T+S V G E ++ ++ M K PN V + S
Sbjct: 250 KSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP-----PNVVTFNMLIS 304
Query: 505 F--------------DK--RFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
F D+ ++ P + +YN ++ A C R A + M + G P
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +S+ L+ A G V+ A+++L +++ G +P +++Y T I ++ + K+A L
Sbjct: 365 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELL 424
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EM +QP+++TY T+ R + E + QDM G + N ++
Sbjct: 425 NEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDM---GIRPNTVLYNAILLGL 481
Query: 667 CE 668
C+
Sbjct: 482 CK 483
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 171/410 (41%), Gaps = 55/410 (13%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN ++ C+ G A+ + ++ ++ D +TY+T+++ A
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMP-------MEPDSYTYNTLIRGLCGRGRTGNA 175
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L V +DML G P+ +T++ L+ A +QAM L +EM GC P+ N+++
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALG----EDYDGNTDRISNMEHKDKQSI 490
+ + D A +S T+S V G E ++ ++ M K
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQK----- 290
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
+ P T+N+L+ C A+ ++++ G +PN
Sbjct: 291 -------------------GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S+ ++ A ++ A+ +++M G PD+V+Y T + R + A L +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWC 667
+K P L++Y T++ ++ G + ++ L + +M G + + TY
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAG---KTKEALELLNEMVTKGLQPDIITY-----STIS 443
Query: 668 EGVIQDKNQNQGEVTLCRRTN-SQRPQSLLLEKVAVHLQKSAAENLAIDL 716
G+ ++ + C+ + RP ++L + + L K + AIDL
Sbjct: 444 SGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 226 NFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDL 282
N + F +R LV A+ D K+ +PN I+ C RA+ E +
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH--AFCKQKKMDRAMAFVELM 357
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +I +N+L+ ++ +E+ ++ G + SYN ++ AG T
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-----------VFADAKWWQMAL------ 383
A E+ E + KG L+ D+ TYSTI + A K M +
Sbjct: 418 KEALELLNE---MVTKG-LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473
Query: 384 ---------KVKED---------MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
K +E M+S G PN T++ LI GLV++A L E+
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELC 533
Query: 426 QAG 428
G
Sbjct: 534 SRG 536
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 198/479 (41%), Gaps = 55/479 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 219 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 271
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 272 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 329
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 330 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 386 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 445
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 446 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 501
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 502 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 561
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 562 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 621
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F+EM +QPN V Y L+RA R G L L + +DM G N LI+
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKGISPNSATYTSLIK 677
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 456 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 569
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 570 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 629
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 630 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 663
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 664 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 702
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 703 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 762
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 763 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 792
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 370
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 426
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 427 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 486
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 725
Query: 641 L 641
L
Sbjct: 726 L 726
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 56/357 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 534
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 535 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 594
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 595 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 631
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 632 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 667
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 668 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 727
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM + PN +TY ++ +R G++ E + L +M + G + KE I
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 781
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 583 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 642
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 643 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 699
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 700 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 755
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 756 TEASRLLNEMREKGIVPDS 774
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M G++PN +++ +ID G G + A + M E GM P ++ Y+ +K
Sbjct: 271 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 330
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+KR+ A+ + +EM PN++ Y L+ + GSL+ + + + M G
Sbjct: 331 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---KAIEIKDLMVSKGLSL 387
Query: 655 NDTYLKELIEEWCEGVIQDK-------------NQNQGEVT 682
+ LI+ +C+ D N NQG T
Sbjct: 388 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 428
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 264
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L++ +R + V ++M K G+ N LI+ + E
Sbjct: 325 LVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 366
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 252
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 253 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 312
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 313 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 360
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 361 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 411
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 412 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 471
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 472 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 512
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 37/310 (11%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ CNILL + V A +F + F
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-------------------- 238
Query: 477 DRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS------FKPTTTTYNILMKAC--CT 527
D + D T N F K FS P T+N ++ C
Sbjct: 239 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 298
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +M G+ P I+++IL+ + + A +LK M + G P+V+ Y
Sbjct: 299 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 358
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + L +A + + M + TY TL++ + G ++ L ++M
Sbjct: 359 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEM 415
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKN-QNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
G+ N +I C ++ D + GE+ L + P LL + L K
Sbjct: 416 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL----RNMSPGGGLLTTLISGLCK 471
Query: 707 SAAENLAIDL 716
+ A++L
Sbjct: 472 HGKHSKALEL 481
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 198/479 (41%), Gaps = 55/479 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 230 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 340
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 341 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 457 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F+EM +QPN V Y L+RA R G L L + +DM G N LI+
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKGISPNSATYTSLIK 688
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 467 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 580
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 641 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 674
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 675 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 803
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY---------M 273
LF + F K + A++ + ++ +PN+ T+ID G+CG Y M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 274 KSRA--------------------------IYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
R + +++ + N+ V+N+L++ + A L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 437
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 736
Query: 641 L 641
L
Sbjct: 737 L 737
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 56/357 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 545
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 642
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 643 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM + PN +TY ++ +R G++ E + L +M + G + KE I
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 792
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 710
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 711 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 767 TEASRLLNEMREKGIVPDS 785
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M G++PN +++ +ID G G + A + M E GM P ++ Y+ +K
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+KR+ A+ + +EM PN++ Y L+ + GSL+ + + + M G
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---KAIEIKDLMVSKGLSL 398
Query: 655 NDTYLKELIEEWCEGVIQDK-------------NQNQGEVT 682
+ LI+ +C+ D N NQG T
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L++ +R + V ++M K G+ N LI+ + E
Sbjct: 336 LVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 263
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 371
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 372 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 37/310 (11%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ CNILL + V A +F + F
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-------------------- 249
Query: 477 DRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS------FKPTTTTYNILMKAC--CT 527
D + D T N F K FS P T+N ++ C
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +M G+ P I+++IL+ + + A +LK M + G P+V+ Y
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + L +A + + M + TY TL++ + G ++ L ++M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEM 426
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKN-QNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
G+ N +I C ++ D + GE+ L + P LL + L K
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL----RNMSPGGGLLTTLISGLCK 482
Query: 707 SAAENLAIDL 716
+ A++L
Sbjct: 483 HGKHSKALEL 492
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 169/414 (40%), Gaps = 59/414 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 94 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 153
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 154 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 209
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 269
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 270 TVMTAYANVGRVDEALALF--------------------DRM------------------ 291
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 292 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 342
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 343 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 402
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P L TY LL SR G Q ++ M K G+K ND L++ + +G
Sbjct: 403 PCLTTYNALLNVLSRQGDWSTAQ---SIVSKMLKNGFKPNDQSYSLLLQCYAKG 453
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 204/461 (44%), Gaps = 42/461 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 378
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 379 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 438
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N Q ++LLQ A +E+ + + +F SW + +T V I+N
Sbjct: 439 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLV------------IANF 486
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + + + V K +KP +N ++ + Y + + + ++
Sbjct: 487 KCRRLEGVEKAFQEV---------KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIK 537
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ I++ L+D S A +ILK ++ + PDVV+Y T I + +K
Sbjct: 538 QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIK 597
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + EM + P +VTY TL+ Y SL + V M K + +
Sbjct: 598 EAQRILSEMIADGMAPCVVTYHTLVGG---YASLEMFNEAREVVNYMIHHNLKPMELTYR 654
Query: 661 ELIEEWCEGVIQDKNQN-QGEVTLCRRTNSQRPQSLLLEKV 700
+++ +C+ D+ + E++ + Q+ Q +L ++
Sbjct: 655 RVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHMLEARI 695
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 108 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 167
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 168 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 224
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 225 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 283
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 284 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 343
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T ++ M+ + +T N + +++ + ++FK
Sbjct: 344 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 461
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 462 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 521
Query: 630 RYG 632
+ G
Sbjct: 522 KNG 524
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 165/422 (39%), Gaps = 59/422 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVT 288
GKK + L + + +PN T++ VCG G DY+ + ++S V
Sbjct: 310 LGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTR--VLNGMKSCGVE 367
Query: 289 LNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L+ +N+L++ + ++Y M G + +YN LL G+ AQ I
Sbjct: 368 LSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSI 427
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ K K + +YS +++ +A +++++ + P+ + +L+
Sbjct: 428 VSKM----LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVI 483
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A +E F+E+ G +P+ N +L + + +A +F S
Sbjct: 484 ANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI------- 536
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--A 524
KQS P TYN LM A
Sbjct: 537 --------------------KQS--------------------GLSPDLITYNSLMDMYA 556
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV
Sbjct: 557 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 616
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + + +A + M H+ ++P +TY ++ + + E ++ L+
Sbjct: 617 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 676
Query: 645 QD 646
D
Sbjct: 677 SD 678
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 469 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 527
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 528 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 587
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 588 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 643
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 644 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 701
Query: 451 R 451
R
Sbjct: 702 R 702
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR-LKQAFSLFEE 608
++T ++ A +G E ALQ+ +R G+ P +V Y + V R R + +L EE
Sbjct: 91 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
M+ ++P+ T T++ A R G L Q +A ++D+ G+
Sbjct: 151 MRAAGVEPDDFTASTVIAACGRDGLL---DQAVAFFEDLKARGH 191
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 58 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 117
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ P +VTY +L R G + +A+ ++M AG + +D
Sbjct: 118 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAGVEPDD 160
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 183/445 (41%), Gaps = 55/445 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R ++ + + G GN D
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 420 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---------------ITLLRARSRYGSLHEVQQCLAVY 644
K+A L ++ H P+ + Y + LL+ G + E + VY
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK---VY 576
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
Q M +K + + LI C G
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRG 601
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 168/366 (45%), Gaps = 37/366 (10%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M + GV ++ +YNIL++A C G +E G V + G + TY+T+V F
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRL---EEAVGVVGDMRGAGCAP-NAVTYNTLVAAF 197
Query: 374 ADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A A +V M G PN +T++S++N AG +E A +F+EM++ G P+
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----IS 480
N LL + + +F T ++ T + GN ++ ++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 481 NMEHKDKQ--SITNTP--------NFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT-- 527
M + + +T T F+ ++ + + ++ +P+ YN L+ C
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D R L+ EM + P+ ++++ +I GN++ A Q+ + M + G+ PD +
Sbjct: 378 RMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y++ I+ KRL A LFE M +QP+ TY TL+ + G+ V++ L+++
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN---VEKALSLHD 492
Query: 646 DMWKAG 651
+M + G
Sbjct: 493 EMIRKG 498
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 27/313 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + ML GV PN T++ L+ A G +E+A+ +
Sbjct: 118 VPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN+ N L+ A A + D A R L R +K + +
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKAL 535
ME K FD+ R P +YN L+ C + A+
Sbjct: 237 GRMEGARK----------------VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM GL P+ +++T LI A +GN+E A+ ++ MRE G+ + V +T I +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L A EEM+ IQP++V Y L+ + G + ++ + ++M K +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE---LIREMEAKRVKPD 397
Query: 656 DTYLKELIEEWCE 668
+I +C+
Sbjct: 398 VVTYSTIISGYCK 410
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 18/310 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V+TY+ +V+ + A+ V DM AG PN +T+++L+ A AG ++ A +
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 422 EEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M + G +PN N ++ +A + + A ++F + L D +S
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM----VREGLAPDVVSYNTLLS 266
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
K + V +S +R P T+ L+ A C + + AL+ +
Sbjct: 267 GY---CKVGCLHESLAV----FSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR GL N +++T LID G ++ AL ++ MR+ G+ P VV Y I + R
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ A L EM+ +++P++VTY T++ + G+L Q + Q M K G +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ---LNQKMLKKGVLPDAIT 435
Query: 659 LKELIEEWCE 668
LI CE
Sbjct: 436 YSSLIRGLCE 445
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 507
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 588 TAIK 591
+ ++
Sbjct: 628 SLVR 631
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 42/205 (20%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R P TYNIL++A C +A+ + +MR G +PN +++ L+ A +G ++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 566 GALQILKIMREDG------------------------------------MSPDVVAYTTA 589
GA +++ +MRE+G ++PDVV+Y T
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + L ++ ++F EM + P++VT+ +L+ A + G+L +Q +A+ M +
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL---EQAVALVAQMRE 321
Query: 650 AGYKANDTYLKELIEEWC-EGVIQD 673
G + N+ LI+ +C +G + D
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDD 346
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++R + ++ +N+L+N + E+ + M+ V D+ +Y+ ++ C
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ + + KGVL D TYS++++ + K A ++ E+ML GV P+
Sbjct: 412 GNLDSAFQLN---QKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-F 456
T+++LI+ G VE+A+ L +EM++ G P+ ++L+ ++ + A RL F
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------S 510
+ + + V YD S E K ++ F DK + +
Sbjct: 528 KLY--HEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDRN 583
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT---------------- 552
+K + Y+IL+ C KAL +M G SPN S
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643
Query: 553 -------------------ILIDACGGSGNVEGALQILKIMREDGMSP 581
LID GNV+ + +L M DG+ P
Sbjct: 644 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 411 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 459
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 460 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 578 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 634 FEEGMVVEADNAIQDLL 650
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G +P+ ++ ++ A ++ A + L M G++P+V Y ++ RL++A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ +M+ PN VTY TL+ A R G L ++ +++ ++ A K N +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSM 229
Query: 663 IEEWCE 668
+ C+
Sbjct: 230 VNGLCK 235
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 196/453 (43%), Gaps = 74/453 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + +
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ +MQKLG D +Y L+K C GN +A +++ E+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 351 -----------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ ++A+G++ DV +Y+T++ F + W+ A + +ML G
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T S LI+ G V +A L E ++Q GC + C L++ + +A
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583
Query: 454 RLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYS 503
+LF ++ + G GN +I+ HK+ S T+ N PN+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNI-KIALELHKNMLSDTSPYGINCKPNAISY 642
Query: 504 SF------------DKRFSFK--------PTTTTYNILMKACCTD--YYRVKALMNEMRT 541
S + R FK P +Y L+ C + K L NEM
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G+ P+ ++++LID G V A ++L++M + G P+ V YTT +K + R+ +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A LF +M+ P++VTY TL++ + G++
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNI 795
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 174/407 (42%), Gaps = 76/407 (18%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMN--VNAHDLKFTLEVYKN 314
C T++ G+C + S+A L+ Q + N+ +LM + ++K LE++KN
Sbjct: 566 CTTLVK--GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 623
Query: 315 M------QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
M + + SY+I++ C G A+E++ E+K L GV+ DV +Y++
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL---GVIP-DVISYTS 679
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + W+ A + +M+ GV P+ T+S LI+ G V +A L E M+Q G
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ L++ + A +LF
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKM----------------------------- 770
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC------TDYYRVKALMNEMRTV 542
++ P TY LMK C T K ++++
Sbjct: 771 ------------------QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Query: 543 G--LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P+ IS++I+ID G + A ++ K M+ G+ P+V++YT+ I RS +L+
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
A LF EM +Q N VTY ++ + G + + A++Q M
Sbjct: 873 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK-----ALFQKM 914
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 204/443 (46%), Gaps = 36/443 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-GV-LKLDVFTYSTI 369
+ +MQKLG D +Y L+K C GN +A +++ E+ + + G+ K + +YS I
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A ++ ++M + G+ P+ I+++SLI+ ++G E+A LF EML G
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD----GNTDRISNMEHK 485
+P+ +L+ F + ++ + L + V G D + M+H+
Sbjct: 232 QPDVTTSGVLID------MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD------YYRVKALMNEM 539
++ T F+ K+ +P Y LMK C + + ++N+
Sbjct: 286 ISEA---TQLFMSM-------KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335
Query: 540 RTVGLS---PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
G+ P+ + ++LID G V A ++L++M + G D+V Y+T IK
Sbjct: 336 SQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCME 395
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH-EVQQCLAVYQDMWKAGYKAN 655
R+ +A LF M+ +P+ +TY TL++ + G+++ +Q + D + G K
Sbjct: 396 HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK 455
Query: 656 DTYLKELIEEWCEGVIQDKNQNQ 678
T + I +G+ +D+ +++
Sbjct: 456 PTLISYSI--IIDGLCKDRREDE 476
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 181/409 (44%), Gaps = 37/409 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P + IID G+C D + +R +++++++Q + ++ + SL++ H K+
Sbjct: 163 PTLISYSIIID--GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAK 220
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M +G+ D+ + +L+ C G + A E+ + H +G + LD+ TYST+
Sbjct: 221 CLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH---RGCI-LDIVTYSTL 276
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A ++ M G P+ I + +L+ G + A+HL +EML
Sbjct: 277 IKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336
Query: 430 EPNSQCCNILLQACVEACQFD---RAFRLFRSWTLSKTQVALGEDYD----GNTDRISNM 482
+ +C I + D + ++ + L + + G D + M
Sbjct: 337 QYGIKC--IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 394
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRV-----KALM 536
EH+ ++ T F+ ++ +P TY LMK C T + + ++
Sbjct: 395 EHRISEA---TWLFMSM-------QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 537 NEMRTVGLS--PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
N+ G+ P IS++I+ID + A ++ + M+ G+ PDV++YTT I
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
S + ++A LF EM IQP++ T L+ + G + E + L V
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 553
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 152/381 (39%), Gaps = 85/381 (22%)
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI---------LLKACCLAGNT 340
+ FN L+N N + L + + G + D+ +Y+I L+ C G
Sbjct: 11 FTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKV 70
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF------ADAKWWQMALKVKEDMLSAGV 394
+ A E+ ++ + +G + LD+ TYST++K ++A W M+++ G
Sbjct: 71 IEANEL---LEVMIQRGCI-LDIVTYSTLIKGLCMEHRISEATWLFMSMQ------KLGC 120
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQ------AGCEPNSQCCNILLQACVEACQ 448
P+ IT+ +L+ G + A+ L +EML C+P +I++ + +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A LF+ K
Sbjct: 181 EDEARELFKEM-----------------------------------------------KA 193
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y L+ C + + K L NEM VG+ P+ + +LID G V
Sbjct: 194 QGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIE 253
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L++M G D+V Y+T IK R+ +A LF MK +P+ + Y TL++
Sbjct: 254 ANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 313
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
+ G ++ L ++Q+M
Sbjct: 314 GLCQTG---KINIALHLHQEM 331
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 175/422 (41%), Gaps = 51/422 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + ++
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-GV--LKLDVFTYST 368
+ +M+KLG D +Y L+K C G +A ++ E+ + ++ G+ ++ DV T S
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A ++ E M+ G + +T+S+LI + +A LF M + G
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 412
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P++ L++ + + A +L + +
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQ------------------------------E 442
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +T + KPT +Y+I++ C D +A L EM+ G+ P
Sbjct: 443 MLNDTGRY-----------GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP 491
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ IS+T LI SG E A + M + G+ PDV + I + + ++ +A L
Sbjct: 492 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E + ++VT TL++ H + + ++ M K G N L++
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMK---HRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608
Query: 667 CE 668
C+
Sbjct: 609 CQ 610
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 142/359 (39%), Gaps = 82/359 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN IID CG ++R ++ K
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELF---------------------------------K 663
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M+ LGV+ D+ SY L+ C +G A+ ++ E+ + GV + DV T+S ++ +
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI---GV-QPDVTTFSVLIDML 719
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A ++ E M+ G PNT+T+++L+ + +A LF +M + GC P+
Sbjct: 720 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 779
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
L++ + A L K+ +++T
Sbjct: 780 VTYGTLMKGLCQTGNIKTALELH------------------------------KKMLSDT 809
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
+ N FKP +Y+I++ C +A L EM+ +G+ PN IS+
Sbjct: 810 GQYGTN-----------FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 858
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
T LI SG +E A + M + G+ + V Y+ I + ++ +A LF++M+
Sbjct: 859 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 513 PTTTTYNILMKACCTDYYRVK----ALMNEMR--------TVGLSPNHISWTILIDACGG 560
P + T+NIL+ C + RV A+ MR T + P+ + ++LID
Sbjct: 8 PDSFTFNILINCLC-NVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCK 66
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V A ++L++M + G D+V Y+T IK R+ +A LF M+ +P+ +T
Sbjct: 67 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 126
Query: 621 YITLLRARSRYGSLH-EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
Y TL++ + G+++ +Q + D + G K T + I +G+ +D+ +++
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI--IIDGLCKDRREDE 183
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 198/464 (42%), Gaps = 54/464 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++Y +++ + + A D +V++ M++ + +YN+++ C +G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E +G + + G L D FTY ++ + A + ++M +G+ PN +
Sbjct: 294 V---EEAFGFKEEMVDYG-LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +L++ G +A + +EM+ AG +PN + L++ + Q RA +L +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------- 512
+V L D T T N + H+ DK +F+
Sbjct: 410 I----KVGLRPD-------------------TFTYNPLMQGHFQQHDKDGAFELLNEMRN 446
Query: 513 ----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y I++ C + +A L+ EM + GL PN + LI GN+
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISL 506
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + L+ M + + PD+ Y + IK R+++A + +++ + P+ TY L+
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWCEGVIQDKNQNQGEVTLCR 685
+ G+L + Q L + M +G K N DTY + EG + + + L
Sbjct: 567 GYCKTGNLEKADQLL---RQMLNSGLKPNADTY-----TDLLEGYFKSNDYEKVSSILQS 618
Query: 686 RTNS-QRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIV 728
S +P + + V +L +S EN+ + LT+VE +V
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRS--ENMEVAFMVLTEVEKNGLV 660
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 186/430 (43%), Gaps = 64/430 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-- 309
PN+Y +I+ G+C G+ ++ + E++ S+ + N +++ L+ ++ + +L
Sbjct: 451 PNVYSYGIMIN--GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M K V D+ YN L+K G A+E Y +V+ K L D FTYS +
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ----KRGLVPDEFTYSGL 564
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A ++ ML++G+ PN T++ L+ + E+ + + ML +G
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P++ I+++ + + AF + T+V +K
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVL-------TEV-------------------EKNG 658
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ VP+ H Y+ L+ C D + L++EM GL P
Sbjct: 659 L------VPDLH---------------IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + LID SG++ A + + G+ P+ V YT I ++ + AF L++
Sbjct: 698 IVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYK 757
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM I P+ Y L S L +Q L + ++M+ GY AN + L+ +C
Sbjct: 758 EMLDRGIAPDAFVYNVLATGCSDAADL---EQALFLTEEMFNRGY-ANVSLFNTLVHGFC 813
Query: 668 E-GVIQDKNQ 676
+ G +Q+ +
Sbjct: 814 KRGKLQETEK 823
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 31/369 (8%)
Query: 276 RAIYE-DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
RAI + D RS++ + + V + L++ ++ +V M LG+ N LLK
Sbjct: 157 RAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLK 216
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A L ++ G +E G+L DV+TYST ++ A+ + A KV E+M
Sbjct: 217 DLLRADAMELLWKLKG---FMEGAGILP-DVYTYSTFIEAHCKARDFDAAKKVFEEMRRR 272
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
N +T++ +I+ +G VE+A EEM+ G P++ L+ + + A
Sbjct: 273 DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEA 332
Query: 453 FRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDK 507
L + S + V G DG E D K+ I+
Sbjct: 333 KALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA--------------- 377
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P Y+ L++ C R L+ EM VGL P+ ++ L+ + +
Sbjct: 378 --GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA ++L MR G+ P+V +Y I ++ K+A +L EEM ++PN Y L+
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495
Query: 626 RARSRYGSL 634
S+ G++
Sbjct: 496 IGHSKEGNI 504
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+R + ++ A +K+ P+++I ++I G+C D K+ + +++ +
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS--GLCKIADMEKAVGLLDEMAKE 692
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ I +N+L++ + D+ V+ ++ G++ + +Y L+ C G+ A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++Y K + +G+ D F Y+ + +DA + AL + E+M + G N +++
Sbjct: 753 FDLY---KEMLDRGIAP-DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNT 807
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
L++ G +++ L M+ PN+Q ++ +A + A R+F
Sbjct: 808 LVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF 860
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I + + + K D+ A+ D K P + +ID G C GD
Sbjct: 659 LVPDLHI-YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID--GFCRSGDIS 715
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++R +++ + ++ + N + +L++ N D+ ++YK M G+ D YN+L
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A + L Q ++ + + +G + +F +T+V F Q K+ M+
Sbjct: 776 TGCSDAAD--LEQALF-LTEEMFNRGYANVSLF--NTLVHGFCKRGKLQETEKLLHVMMD 830
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ PN T +++ AG + +A +F E+ Q
Sbjct: 831 REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +M GV ++ +YNIL++A C G+ +E ++ + G +V TY+T+V
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHR---KEALSILRDMRGAGC-GPNVVTYNTLVA 193
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A A ++ ML G+ PN +T++S++N AG +E A +F+EM++ G P
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTD----RI 479
+ N L+ +A A +F T ++ T + GN + +
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313
Query: 480 SNMEHKDKQ--SITNTP--------NFVPNSHYSSFDKR-FSFKPTTTTYNILMKACCT- 527
M + Q +T T F+ ++ + R KP+ YN L+ C
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L++EM GL P+ ++++ +I A + + A ++ + M E G+ PD + Y
Sbjct: 374 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 433
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ I+V KRL A LF+ M +QP+ TY +L+ + G+ V++ L+++
Sbjct: 434 SSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN---VERALSLHDK 490
Query: 647 MWKAG 651
M KAG
Sbjct: 491 MVKAG 495
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 201/474 (42%), Gaps = 51/474 (10%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
L SA R +D+ +PN+Y +I +CG G ++ +I D+R N+ +N
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGR-GHRKEALSILRDMRGAGCGPNVVTYN 189
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L+ A ++ + M G+ ++ ++N ++ C AG A++++ E+
Sbjct: 190 TLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM-- 247
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L D +Y+T+V + A AL V +M G+ P+ +T++SLI+ AG
Sbjct: 248 --REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQV---A 467
+E A+ L +M + G + N L+ + D A R R + + V A
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365
Query: 468 LGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------- 512
L Y D + + ME K + T + + +++ + D +F+
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 513 --PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+ L++ C + A L M +GL P+ ++T LID GNVE AL
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP------------ 616
+ M + G+ PDVV Y+ I +S R +A L ++ H + P
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCC 545
Query: 617 ---NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L + + LL+ G ++E + VYQ M + + + LI C
Sbjct: 546 RKAELKSVLALLKGFCMKGLMNEADK---VYQSMLDRNWNLDGSVYSVLIHGHC 596
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 28/313 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + + MLS GV PN T++ LI A G ++A+ +
Sbjct: 116 VLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILR 174
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN N L+ A A + D A RL L V +G +
Sbjct: 175 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC-KA 233
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
ME K FD+ R P +YN L+ C +AL
Sbjct: 234 GKMEDARK----------------VFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSV 277
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P+ +++T LI +GN+E A+ +++ MRE G+ + V +T I +
Sbjct: 278 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK 337
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L A M+ +I+P++V Y L+ G + E ++ L +M G K +
Sbjct: 338 KGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL---HEMEAKGLKPD 394
Query: 656 DTYLKELIEEWCE 668
+I +C+
Sbjct: 395 VVTYSTIISAYCK 407
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 505 FDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
FD S P TYNIL++A C +R +AL + +MR G PN +++ L+ A
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 197
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G V+GA +++ +M + G+ P++V + + + ++ +++ A +F+EM + P+ V+
Sbjct: 198 AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
Y TL+ + G HE L+V+ +M + G + LI C+
Sbjct: 258 YNTLVGGYCKAGCSHEA---LSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 172/455 (37%), Gaps = 98/455 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I V G+ + + +R + + +N F +L++ L L
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + + YN L+ C+ G A+E+ E +EAKG LK DV TYSTI+
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE---MEAKG-LKPDVVTYSTIIS 403
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LF+ M++ G +P
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------ 485
+ + T + G +GN +R ++ K
Sbjct: 464 DE---------------------------FTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Query: 486 --DKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKAC----------C 526
D + + N + S + ++ FK P T Y+ LM C
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +K LMNE V S +W N++G++ Y
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNW-----------NLDGSV-----------------Y 588
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ I R+ + +A S ++M PN + I+L+R G + E Q V Q
Sbjct: 589 SVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQ---VIQQ 645
Query: 647 MWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
+ A+ K LI D N N+G V
Sbjct: 646 LLNCCSLADAEASKALI---------DLNLNEGNV 671
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ ILI A G G+ + AL
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
IL+ MR G P+VV Y T + R+ + A L M ++PNLVT+ +++
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G + + ++ V+ +M + G + L+ +C+
Sbjct: 231 CKAGKMEDARK---VFDEMMREGLAPDGVSYNTLVGGYCKA 268
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 161/373 (43%), Gaps = 21/373 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F + F KK L AL A ++ P++ +I+ + G ++R +
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + ++ ++++++ D E+ + M + GV+ D +Y+ L++
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR------ 438
Query: 339 NTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
VL +E H+ K ++KL D FTY++++ + AL + + M+ AGV
Sbjct: 439 --VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+S LIN + + +A L ++ P + + L+ C +A +
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKA-ELKSVLA 555
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---S 510
L + + + + Y DR N++ + + N + SF K+
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +T+ L++ + V+A ++ ++ + + LID GNV+ L
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675
Query: 569 QILKIMREDGMSP 581
+L M +DG+ P
Sbjct: 676 DVLHGMAKDGLLP 688
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 217/508 (42%), Gaps = 54/508 (10%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
DA+++ + S P+ Y +I V G + ++ +D+ + N+ + L+
Sbjct: 128 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ F + V M+ G ++ +YN+++ C G A+E+ + L + G
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL---LNRLPSYG- 243
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D +Y+T++K +K W ++ +M+ PN +T+ LI G+VE+A+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALG- 469
+ E+M + GC N+ CNI++ + + + D AF+L T+S T V G
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363
Query: 470 ---EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS-------------FDKRFSFKP 513
E +D + ++ M + PN V + + ++ S
Sbjct: 364 CRAERWDDAKELLNEMVRNNCP-----PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418
Query: 514 TT---TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T TYN L+ C + + + + R++ PN I++T L+ + ++GA ++
Sbjct: 419 CTVGVVTYNALVNGFCVQGH-IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAEL 477
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M P+VV + + + L++A L E+M + PNL+TY TLL ++
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN-- 688
S + L + + G + +I G++ +++ + V L
Sbjct: 538 DCSSEDA---LELLHGLVSKGVSPDVITFSSII-----GILSKEDRIEEAVQLFHVVQDI 589
Query: 689 SQRPQSLLLEKVAVHLQKSAAENLAIDL 716
RP++++ K+ + L K + AID
Sbjct: 590 GMRPKAVVYNKILLGLCKRCEIDNAIDF 617
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 194/481 (40%), Gaps = 70/481 (14%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC-QRLLDSGEVEMFVGLMEVLEE 183
REGR+D +L +L G P + S LLK C + D E E+F E++E+
Sbjct: 225 REGRVDDARELLNRLPSYGFQPDTV---SYTTLLKGLCASKRWDDVE-ELFA---EMMEK 277
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCN 226
+P N+ ++ IR+ C +V RA + CN
Sbjct: 278 NCMP---------------NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322
Query: 227 FV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
V K+ + A + + + +P+ T++ G+C + ++ + ++
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK--GLCRAERWDDAKELLNEMV 380
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
N N FN+ + + ++ + + + M + G + +YN L+ C+ G+
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E++ + K + TY+T++ +A+ A ++ +ML PN +T+
Sbjct: 441 SALELFRSMP-------CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L++ G +E+A+ L E+M++ GC PN N LL + C + A L +
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGL-V 552
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
SK + D + I + +D+ + + V + +P YN
Sbjct: 553 SK---GVSPDVITFSSIIGILSKEDRIEEAVQLFHVV---------QDIGMRPKAVVYNK 600
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C A+ M + G PN ++ ILI+ G ++ A +L ++ G
Sbjct: 601 ILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Query: 579 M 579
+
Sbjct: 661 V 661
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y + A + ++ ++P+ ++T LI G V AL +L M
Sbjct: 114 YNTLVAGYCR-YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+VV YT ++ R+ +QA ++ +EM+ PN+VTY ++ R G + +
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ L + G++ + L++ C
Sbjct: 233 RELL---NRLPSYGFQPDTVSYTTLLKGLC 259
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 198/479 (41%), Gaps = 55/479 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 243 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 353
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 354 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 470 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F+EM +QPN V Y L+RA R G L L + +DM G N LI+
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKGISPNSATYTSLIK 701
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 480 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 593
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 654 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 687
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 688 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 450
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 749
Query: 641 L 641
L
Sbjct: 750 L 750
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 56/357 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 558
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 655
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 656 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM + PN +TY ++ +R G++ E + L +M + G + KE I
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 805
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 607 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 666
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 723
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 724 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 779
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 780 TEASRLLNEMREKGIVPDS 798
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M G++PN +++ +ID G G + A + M E GM P ++ Y+ +K
Sbjct: 295 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 354
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+KR+ A+ + +EM PN++ Y L+ + GSL+ + + + M G
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---KAIEIKDLMVSKGLSL 411
Query: 655 NDTYLKELIEEWCEGVIQDK-------------NQNQGEVT 682
+ LI+ +C+ D N NQG T
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 288
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L++ +R + V ++M K G+ N LI+ + E
Sbjct: 349 LVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 276
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 384
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 385 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 37/310 (11%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ CNILL + V A +F + F
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-------------------- 262
Query: 477 DRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS------FKPTTTTYNILMKAC--CT 527
D + D T N F K FS P T+N ++ C
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +M G+ P I+++IL+ + + A +LK M + G P+V+ Y
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + L +A + + M + TY TL++ + G ++ L ++M
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEM 439
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKN-QNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
G+ N +I C ++ D + GE+ L + P LL + L K
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL----RNMSPGGGLLTTLISGLCK 495
Query: 707 SAAENLAIDL 716
+ A++L
Sbjct: 496 HGKHSKALEL 505
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/563 (21%), Positives = 231/563 (41%), Gaps = 89/563 (15%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 312 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 370
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADIL--------------FCNFVREFGKKRDLV 238
I LC ++ + A+IL FC + + ++ ++
Sbjct: 371 YNVLIHGLC----------KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMG 420
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL D +K P+ +I+ C D + + E + + N+ V++ L+
Sbjct: 421 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + ++ + M GV D+ YN ++ AG +E + ++ +
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGR 537
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LK D T+ + ++ A K ++ML G+ PN ++ LIN AG + +
Sbjct: 538 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ Q C+ + ++ + A ++F
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS------------------- 637
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
E K+K + P TY+ L+ C KA
Sbjct: 638 ------ELKEKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFE 669
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM G++PN + L+D SG+++ A ++ M E G+ PD V Y+T I
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+S+ + +AFSLF EM +QP+ Y L+ + G ++++ + ++++M + G+ A
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKGF-A 785
Query: 655 NDTYLKELIEEWCEGV-IQDKNQ 676
LI+ +C+ IQ+ +Q
Sbjct: 786 TTLSFNTLIDGYCKSCKIQEASQ 808
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 193/462 (41%), Gaps = 77/462 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++ + LGV+ D+ +
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 672
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 733 NVAEAFSLFHEMPSKGVQ------------------------------------------ 750
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 751 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 804
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M + PD V YTT I ++ ++++A LF+EM+ + + VTY +L+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQ 678
++ G EV A+++ M G K ++ +I C+ ++D+ +
Sbjct: 865 YGYNKLGQSSEV---FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 679 GEVT-----------LCRRTNSQRPQSLLLEKVAVHLQKSAA 709
G +T LC+R + LL E + L+ S A
Sbjct: 922 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 169/398 (42%), Gaps = 58/398 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
GD ++ + ++ + + N ++++ ++ D+ +E+ ++M + G++ + +Y
Sbjct: 242 GDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTY 301
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I+ C A A+ + E++ K LK D S ++ F L++K+
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDGFMREGDIDEVLRIKD 357
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M+S G+ N IT++ LI+ G +E+A + + M+ GC+PNS+ +L++
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
RA L + ME + N VP++
Sbjct: 418 NMGRALEL-----------------------LDEMEKR---------NLVPSA------- 438
Query: 508 RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+Y ++ C D L+ +M GL PN + ++ILI A G +E
Sbjct: 439 --------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L M G++PD+ Y I ++ ++++A + E++ ++P+ VT+ +
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
S+ G + E + + +M G N+ LI
Sbjct: 551 LGYSKTGKMTEAAK---YFDEMLDHGLMPNNPLYTVLI 585
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 177/392 (45%), Gaps = 37/392 (9%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 669
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E + +KGV + F Y+ +V + A+ + +ML G
Sbjct: 730 KSENVAEAFSLFHE---MPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 785
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++++LI+ + +++A LF+EM+ P+ ++ +A + + A L
Sbjct: 786 -TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 844
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYS 503
F+ T++ T + G + G + + M K + T V +H
Sbjct: 845 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 904
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ +FK T +++L+ A C D L++EM +GL P+ +
Sbjct: 905 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 964
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPD 582
L+ + +G ++ A ++ + ++ G+ PD
Sbjct: 965 CNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
D + F T TY L+ A C D K ++ EM GL+PN ++++I+ G
Sbjct: 220 LDAKMGFDVYTYTY--LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+++ A+++ + M E G+ P+ YT R+KR+ +A FEEM+ ++P+
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN--QGE 680
L+ R G + EV L + M G N LI C+ +K +G
Sbjct: 338 ALIDGFMREGDIDEV---LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394
Query: 681 VTLCRRTNSQRPQSLLLE 698
VTL + NS R LL+E
Sbjct: 395 VTLGCKPNS-RTFCLLIE 411
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 37/367 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+L+ C G G L + + DV TY+TI++
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEI-------GSALQLLDRMSVSPDVVTYNTILRTLC 223
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + + P+ IT++ LI A V QAM L +EM GC+P+
Sbjct: 224 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283
Query: 435 CCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTDRISN 481
N+L+ + + D A R + ++ + G D ++
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE-KFLAE 342
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K + P + +YN L+ A C D
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++ Y T
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + A L +EMK ++P+++TY TL+ SR G +V + +A + D+
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG---KVDEAIAFFHDLE 519
Query: 649 KAGYKAN 655
+ G K N
Sbjct: 520 EMGVKPN 526
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + H+ + G + +V T++
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRL---DEAIRFLNHMPSYGC-QPNVITHNI 322
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K +M+ G +P+ +T++ LIN GL+ +A+ + E+M Q G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL A + + +RA +E+ D
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERA-----------------------------IEYLDI- 412
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
V Y P TYN L+ A C D A ++N++ + G SP
Sbjct: 413 -------MVSRGCY----------PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G + A+++L M+ G+ PD++ Y+T + R ++ +A + F
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ ++PN +TY +++
Sbjct: 516 HDLEEMGVKPNAITYNSIM 534
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G + R + S R DA K
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINF--LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
D K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLGSKGC 453
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+K+ ++M G+ P+ IT+S+L+ + G V++A+
Sbjct: 454 SPV-LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
F ++ + G +PN+ N ++ +A Q RA
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 55/364 (15%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ L A+R + + PN+ I+ G +M + ++ + + ++
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN L+N + ++V + M + G + SYN LL A C A E Y ++
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE-YLDI 412
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++G D+ TY+T++ +A+++ + S G +P IT++++I+ +
Sbjct: 413 --MVSRGCYP-DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + A+ L +EM G +P+ + L+ + D A F
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL----------- 518
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ KP TYN +M C
Sbjct: 519 ------------------------------------EEMGVKPNAITYNSIMLGLCKARQ 542
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
V+A+ + M G P S+ ILI+ G + AL++L + G+ A
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 589 AIKV 592
+K+
Sbjct: 603 VVKI 606
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++ +M + G P+ I++ +LI +G + ALQ+L M +SPDVV Y T
Sbjct: 162 WKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTI 218
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
++ S +LK+A + + + P+++TY L+ A + V Q + + +M
Sbjct: 219 LRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG---VGQAMKLLDEMRD 275
Query: 650 AGYKANDTYLKELIEEWCE 668
G K + LI C+
Sbjct: 276 KGCKPDVVTYNVLINGICK 294
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 179/408 (43%), Gaps = 29/408 (7%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLF-----LKLNRTEAAWVL--YAEMFRLRIKSSVYTFN 225
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G H+E GV K ++ TY+TIV + + + A +
Sbjct: 226 IMINVLCKEGKLKKAKDFVG---HMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTT 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + P++ T+ SLI+ G +E+A +FEEM+Q G P++ N L+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A ++ L K Y+ + ME + ++ +
Sbjct: 342 LDMA-SAYKDEMLKKGISPTMSTYNSLIHALF-MEQRTDEAECMIKEI----------QE 389
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TYNIL+ C KA + +EM G+ P ++T L+ ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + K + +G+ PDV+ + I + +K AF L ++M ++ P+ VT+ T+++
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R G + E ++ ++ +M + G K + LI + G I+D
Sbjct: 510 GHCREGKVEEARE---LFDEMKRRGIKPDHISFNTLISGYSRRGDIKD 554
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 178/406 (43%), Gaps = 45/406 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y ++ + ++Y FN ++NV LK + +M+ GV ++ +YN ++ C
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G A I +K + ++ D FTY +++ + A K+ E+M+ G+
Sbjct: 268 SSGRVEAADAILTTMK----RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + +++LI+ N G ++ A +EML+ G P N L+ A L
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA------------L 371
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF---- 511
F + + + E ++ K T N + N + + + +F
Sbjct: 372 FMEQRTDEAECMIKE-----------IQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
KPT TY L+ +A L ++ + G+ P+ I + LID +
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+GA ++LK M + PD V + T ++ R ++++A LF+EMK I+P+ +++
Sbjct: 481 NVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TL+ SR G +++ V +M G+ L++ C+
Sbjct: 541 TLISGYSRRG---DIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 175/406 (43%), Gaps = 43/406 (10%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKF 307
++Y +I+V G K++ + + V NI +N++++ V A D
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
T M++ + D +Y L+ C G A +I+ E+ KG L+ Y+
Sbjct: 280 T-----TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ---KG-LRPSAVIYN 330
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F + MA K++ML G++P T++SLI+A ++A + +E+ +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN---MEH 484
G P++ NIL+ +AF L L+ + Y +S M+
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAF-LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 485 KDK--QSITNTP--------NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMK 523
D + IT+ N + + H S+ + + +F+ P T+N +M+
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + + L +EM+ G+ P+HIS+ LI G+++ A ++ M + G +P
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V+ Y ++ +++ A L +EM + P+ TY TL+
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P+ I T+ID G C G+ + A +++ + ++ + +NSL++ + + T E
Sbjct: 324 PSAVIYNTLID--GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR-TDEA 380
Query: 311 --VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV------------------ 350
+ K +Q+ G+ D +YNIL+ C N A ++ E+
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 351 --------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
K + ++GVL DV ++ ++ + A ++ +DM V P
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLP-DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T+++++ G VE+A LF+EM + G +P+ N L+ AFR+
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV- 558
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + +T F PT
Sbjct: 559 ------------------------------RNEMLDT----------------GFNPTVL 572
Query: 517 TYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDA 557
TYN L++ C + + L+ EM + G++P+ ++ LI+
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 153/393 (38%), Gaps = 79/393 (20%)
Query: 58 ALLSTVRRDLSSRNDY-YADMASKLAKDGRLEEFAMIVESVV------------------ 98
A+L+T++R + + Y + S + K GRLEE + I E +V
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 99 VSEGNVSKFASMLSLEMVASGIVKSIR-----------EGRIDCVVGVLKKLNELGVAPL 147
++GN+ AS EM+ GI ++ E R D ++K++ E G++P
Sbjct: 337 CNKGNLD-MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP- 394
Query: 148 ELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV 207
D + +L N R ++ + F+ E+L P K+
Sbjct: 395 ---DAITYNILINGYCRCANAKKA--FLLHDEMLASGIKPTKK----------------- 432
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+ + + KK + A + P++ + +ID G
Sbjct: 433 ---------------TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID--G 475
Query: 268 ICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMAD 323
C + A + +D+ V + FN++M + + K E++ M++ G+ D
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
S+N L+ G+ A + E+ V TY+ +V+ + +A
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEM----LDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
++ ++M+S G+TP+ T+ +LI A + ++
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G KAN T L +++
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 165/430 (38%), Gaps = 82/430 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 129 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYG--------------------EVKHLEAKGV------- 358
Y++++ AGN A++++ E + E +
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS 308
Query: 359 -LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ DV +Y+ ++K + A+ + AL V E+ML AGV P ++ L++A A +G+VEQA
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M + P+ +L A V A + A + F+ + DG
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-----------DG--- 414
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKAL 535
F+P TY L+K A D ++ +
Sbjct: 415 ---------------------------------FEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+MR G+ N T ++DA G N AL K M G+ PD A + +
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 501
Query: 596 SKRLKQAFSL 605
L++A L
Sbjct: 502 QDELEEAKEL 511
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ +TY +L+ E ++ D K+ K +
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 183/423 (43%), Gaps = 34/423 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E+ R + + +N LM+ AH ++ K G+ D+ NILLK
Sbjct: 103 NRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLK 162
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-- 390
C A + A + + + GV + D +YST++K + Q AL + M+
Sbjct: 163 CLCHAKRSDDAVNVL--LHRMPELGV-EPDTISYSTVLKSLCEDSRSQRALDLLHTMVKK 219
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN ++++++I+ G V +A +LF EM+Q G P+ + + A +A D
Sbjct: 220 SGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMD 279
Query: 451 RAFRLFR---SWTLSKTQVAL-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+A + R S +V G G + M + + F NS+
Sbjct: 280 KAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYM 339
Query: 503 SS-------------FDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
SS FD + KP TY++L+ + Y V L N M G+
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIV 399
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+H + ILIDA G G ++ A+ I M+E G+ PD Y T I R RL A
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M ++P+ + Y +L++ +G+L + ++ ++ + M + + N + +I
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELIS--EMMSRGIPRPNTVFFNSIINS 517
Query: 666 WCE 668
C+
Sbjct: 518 LCK 520
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 175/418 (41%), Gaps = 48/418 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+ T+I G+ K+ ++ ++ Q V ++ ++S ++ A +
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAEL 283
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ--EIYGEVKHLEAKGVLKLDVFTYST 368
V + M G D +YN C + G ++L Q E G + + +G++ D+FT ++
Sbjct: 284 VLRQMISNGFEPDKVTYN-----CMIHGYSILGQWKETAGMFREMTRRGLMP-DIFTCNS 337
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A + + M + G P+ +T+S L++ A G V ++LF M G
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGEDYDGNTDR 478
+ NIL+ A + D A +F +WT A R
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR-----MGR 452
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+++ K Q I KP T YN L++ C VKA L+
Sbjct: 453 LADAMDKFNQMIA-----------------MGLKPDTIVYNSLIQGFCMHGNLVKAKELI 495
Query: 537 NEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + G+ PN + + +I++ G V A I ++ G PDV+ + + I
Sbjct: 496 SEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGL 555
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
++++AF + + M I+P++VTY LL R G + L ++++M G K
Sbjct: 556 VGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNG---RIDDGLILFREMLSKGVK 610
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 19/325 (5%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K T +++ M + G+M D+ + N + + C G + A E + + AKG K D+ T
Sbjct: 314 KETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF---DSMAAKG-HKPDLVT 369
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YS ++ +A + L + M G+ + ++ LI+A G++++AM +F +M
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G P++ ++ A F R RL + +A+G D + + +
Sbjct: 430 ERGVMPDAWTYGTVIAA------FSRMGRLADAMDKFNQMIAMGLKPD------TIVYNS 477
Query: 486 DKQSITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
Q N V S R +P T +N ++ + C + V+A + + + +
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ I++ LID G G +E A +L M G+ PDVV Y+ + R+ R+
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM ++P +TY +L
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHG 622
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 164/411 (39%), Gaps = 57/411 (13%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG 319
+ID G G ++ I+ ++ + V + + + +++ + L ++ + M +G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D YN L++ C+ GN V A+E+ E + ++G+ + + +++I+
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISE---MMSRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A + + ++ G P+ IT++SLI+ G +E+A + + M+ G EP+ + L
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
L + D LFR LSK
Sbjct: 585 LDGYCRNGRIDDGLILFREM-LSK------------------------------------ 607
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV--KALMNEMRTVGLSPNHISWTILIDA 557
KPTT TY I++ D V K + +EM G + + + I++
Sbjct: 608 ----------GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + A+ + K + + ++ T I + ++ ++A LF+ + + PN
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY ++ + GS+ E ++ M K+G + L +I E
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSL---MEKSGCAPSSRLLNNIIRVLLE 765
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 169/431 (39%), Gaps = 71/431 (16%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ F + L A+ ++ P+ + ++I G C G+ +K++ + ++ S+
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ--GFCMHGNLVKAKELISEMMSR 501
Query: 286 NVTL-NIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ N FNS++N V A D+ F L ++ +G D+ ++N L+ L
Sbjct: 502 GIPRPNTVFFNSIINSLCKEGRVVEAQDI-FDLVIH-----IGERPDVITFNSLIDGYGL 555
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G ++ +G + + + G+ + DV TYS ++ + L + +MLS GV P
Sbjct: 556 VGKM---EKAFGVLDAMISVGI-EPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKP 611
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRL 455
TIT+ +++ N G A + EM+++G + C I+L C C D A L
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD-DEAIAL 670
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ ++ M K +I NT D + +
Sbjct: 671 FK--------------------KLGAMNVKFNIAIINT----------MIDAMYKVRKRE 700
Query: 516 TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
L + + GL PN ++ ++I G+VE A + +M
Sbjct: 701 ---------------EANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLME 745
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P I+V + + +A + ++ I T +L SR G
Sbjct: 746 KSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYR 805
Query: 636 E-VQQCLAVYQ 645
E ++ A+YQ
Sbjct: 806 EQIKSLPAMYQ 816
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR + +F N + K+ +V A +D P++ ++ID G+ G K+
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
+ + + S + ++ +++L++ + + L +++ M GV +Y I+L
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G TV A+++ E+ +E+ +D+ T I+ A+ + + + +
Sbjct: 623 LFNDGRTVGAKKMCHEM--IESG--TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N +++I+A E+A LF+ + G PN+ +++ ++ + A
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738
Query: 454 RLF 456
+F
Sbjct: 739 NMF 741
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV TY+ ++ A W+ A + EDML A + P+ T+++LINAC + G +A+
Sbjct: 62 KPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALR 121
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ ++M G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 122 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYF--------ELMKGTNIRPDTTTL 173
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYRVKA 534
+ + H K KQ F S +KR +P T+ I + + KA
Sbjct: 174 NIVIHCLIKVKQYGQAIEIFS-----SMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKA 228
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ + M G+ PN +S+ LI A G + A + M+ G PDVV+YT+ I
Sbjct: 229 VFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFG 288
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
RS++ +A +F+ MK + +PNLV+Y L+ A YGS + Q + + ++M + G
Sbjct: 289 RSQQPARAREVFDMMKRNKCKPNLVSYNALMDA---YGSNGYLPQAVDILREMEQDGIHP 345
Query: 655 N 655
N
Sbjct: 346 N 346
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 170/398 (42%), Gaps = 56/398 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG CG++ ++ + + + V ++ N +++ +++ L
Sbjct: 98 PSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSY 157
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ A EI+ ++ E + + DV T+++I+
Sbjct: 158 FELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMR--EKRSECRPDVVTFTSIIH 215
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + V ML+ G+ PN +++++LI+A A+ G+ ++A +F+EM ++G P
Sbjct: 216 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 275
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + Q RA +F
Sbjct: 276 DVVSYTSLISTFGRSQQPARAREVF----------------------------------- 300
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
KR KP +YN LM A ++ Y +A ++ EM G+ PN +
Sbjct: 301 ------------DMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVV 348
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + +A +AI + ++A +L+ M
Sbjct: 349 SICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSM 408
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ +P+ VT+ L+ R + + ++ L +++M
Sbjct: 409 ENKTTKPDSVTFTILISGCCR---MSKYEEALCFFKEM 443
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 183/440 (41%), Gaps = 62/440 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+++G+ ++ S++R K+ P++ +II + + G +A++ + ++ +
Sbjct: 183 VKQYGQAIEIFSSMR----EKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGI 238
Query: 288 TLNIYVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +N+L++ A H + K V+ M++ G D+ SY L+ + A+E
Sbjct: 239 KPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARARE 298
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ +K + K ++ +Y+ ++ + + A+ + +M G+ PN ++ +L+
Sbjct: 299 VFDMMK----RNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLL 354
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
AC G + G N+ CN + + + ++++A L+RS
Sbjct: 355 AACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRS------- 407
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
ME+K + KP + T+ IL+ C
Sbjct: 408 ----------------MENK------------------------TTKPDSVTFTILISGC 427
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + Y EM + + + ++ +I A G + A + ++ G PD+
Sbjct: 428 CRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDL 487
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V YT I S+ ++ +L++EM+ IQ + + L++A + ++ L +
Sbjct: 488 VTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKA---FNKGNQASNVLIL 544
Query: 644 YQDMWKAGYKANDTYLKELI 663
+ M + G ND E++
Sbjct: 545 AEIMKEKGIPFNDANFFEML 564
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 508 RFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R + P+ +T+N L+ AC C ++ + +M G+ P+ ++ I++ A
Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYIT 623
AL ++M+ + PD I ++ K+ QA +F M K + +P++VT+ +
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 212
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ S G +++ C AV+ M G K N LI +
Sbjct: 213 IIHLYSVRG---QIEDCKAVFSTMLAEGIKPNIVSYNALISAY 252
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 150/358 (41%), Gaps = 33/358 (9%)
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
V LR + H PN+ T++ CG G + ++ + + LN NS
Sbjct: 332 VDILREMEQDGIH---PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSA 388
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ +N + + + +Y++M+ D ++ IL+ CC A + E+ L
Sbjct: 389 IGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLR- 447
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ L YS+++ ++ A + + +G P+ +T++++INA + + + E
Sbjct: 448 ---IPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWE 504
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY-DG 474
+ L++EM + +S C+ L++A F++ + L++ G + D
Sbjct: 505 KVCALYQEMEANNIQLDSIACSALMKA------FNKGNQASNVLILAEIMKEKGIPFNDA 558
Query: 475 NTDRISNMEH--KDKQSITNTPNFV-PNSHYSSF---DKRFSFKPTTTTYNILMKACCTD 528
N + + +D + T+ N + P+ H S + F + I++K
Sbjct: 559 NFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKL---- 614
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+YR AL G S N +++IL+ +G +++L+ M + G+ P Y
Sbjct: 615 FYRFVAL-------GSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMY 665
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 236 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 295 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G KAN T L +++
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 165/430 (38%), Gaps = 82/430 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 136 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 195
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 196 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 255
Query: 326 SYNILLKACCLAGNTVLAQEIYG--------------------EVKHLEAKGV------- 358
Y++++ AGN A++++ E + E +
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS 315
Query: 359 -LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ DV +Y+ ++K + A+ + AL V E+ML AGV P ++ L++A A +G+VEQA
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M + P+ +L A V A + A + F+ + DG
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-----------DG--- 421
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKAL 535
F+P TY L+K A D ++ +
Sbjct: 422 ---------------------------------FEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+MR G+ N T ++DA G N AL K M G+ PD A + +
Sbjct: 449 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 508
Query: 596 SKRLKQAFSL 605
L++A L
Sbjct: 509 QDELEEAKEL 518
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ +TY +L+ E ++ D K+ K +
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 253
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 204/485 (42%), Gaps = 62/485 (12%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSP---NMYICRTIIDVCGICGDYMKSRA 277
D+L V+ G + +ALR ++ + S N I II + G G + +
Sbjct: 129 DVL--GIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAAS 186
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK--- 332
+ +L +++Y + S++ + ++ + V+K M+++G + +YN++L
Sbjct: 187 LLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYG 246
Query: 333 --------------------------------ACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+CC GN L +E G +K ++ G
Sbjct: 247 KMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGN--LYEEAAGVLKEMKLAG-FS 303
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D TY+ ++ V+ ++ + A++V ++M G P+ +T++SLI+A A GL+E A+ L
Sbjct: 304 PDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALEL 363
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+M++ G +P+ LL +A + A ++F +G I
Sbjct: 364 KNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-----------NEGCKPNIC 412
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNE 538
K N F K F P T+N L+ + V + E
Sbjct: 413 TFNALIKMH-GNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 471
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G P ++ LI + G+ + A+ + K M E G++PD+ +Y + R
Sbjct: 472 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGL 531
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
KQ+ + EMK + +PN +TY +LL A Y + E+++ A+ ++++ +
Sbjct: 532 WKQSEKVLAEMKDGRCKPNELTYCSLLHA---YANGKEIERMCALAEEIYSGIIEPRAVL 588
Query: 659 LKELI 663
LK L+
Sbjct: 589 LKTLV 593
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 208/456 (45%), Gaps = 25/456 (5%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + + + + + L AL + + P+++ T++ G +
Sbjct: 338 PPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQ 397
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+E++R++ NI FN+L+ ++ + KFT ++V+++++ D+ ++N LL
Sbjct: 398 IFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLS--- 454
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G + E+ G K ++ G + + T++T++ ++ + A+ V + ML AGV
Sbjct: 455 VFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN 513
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ ++++++ A A GL +Q+ + EM C+PN LL A + +R
Sbjct: 514 PDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIER---- 569
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPT 514
AL E+ + K + + + + + + + ++ F P
Sbjct: 570 ---------MCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPD 620
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TT N ++ KA +++ M+ G +P+ ++ L+ S N E + +IL+
Sbjct: 621 ITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILR 680
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ PD+++Y T I R+ R++ A + EM+ P+++TY T + + Y
Sbjct: 681 EILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFI---ASYA 737
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + + V M K G K N + +++ +C+
Sbjct: 738 ADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ I+ + A + ++ G + ++S+I A + G +A+ +F++M +
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC+P N++L ++ W V L DR+
Sbjct: 229 VGCKPTLITYNVILNV---------YGKMGMPWN---KMVGL-------VDRM------- 262
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVG 543
K P + TYN L+ +CC Y ++ EM+ G
Sbjct: 263 --------------------KSAGIAPDSYTYNTLI-SCCRRGNLYEEAAGVLKEMKLAG 301
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
SP+ +++ L+D G S + A+++L+ M +G P +V Y + I R L+ A
Sbjct: 302 FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDAL 361
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L +M I+P++ TY TLL + G + + + ++++M G K N LI
Sbjct: 362 ELKNQMVEKGIKPDVFTYTTLLSGFEKAG---KDKAAVQIFEEMRNEGCKPNICTFNALI 418
Query: 664 E 664
+
Sbjct: 419 K 419
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
I I PRA +L V K L+ RA+ ++ SP++ ++ + G
Sbjct: 577 IYSGIIEPRA-VLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQ 635
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
K+ I + ++ T ++ +NSLM + + F + E+ + + G+ D+ SYN
Sbjct: 636 MVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYN 695
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ A C G A + E++ D+ TY+T + +A + A+ V
Sbjct: 696 TVIYAYCRNGRMRDASRVLSEMRESGPAP----DIITYNTFIASYAADSMFVEAIDVVCY 751
Query: 389 MLSAGVTPNTITWSSLIN 406
M+ G PN T++S+++
Sbjct: 752 MIKHGCKPNQSTYNSIVD 769
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 181/440 (41%), Gaps = 61/440 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++++ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKAGYKA 654
+ AV ++ KA + A
Sbjct: 849 EQAAIVGAVLRETGKARHAA 868
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 230/546 (42%), Gaps = 59/546 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L+V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E+M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
I+ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + RL +A+ LFEE K +I+ N+V Y +L+ +G + + + + +++ +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG---FGKVGRIDEAYLILEELMQ 685
Query: 650 AGYKAN 655
G N
Sbjct: 686 KGLTPN 691
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALKVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++L +A ++FEEM + P+ +T+ +L+ + G V VY+ M + + N
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKVYEKMLDSDCRTNS 482
Query: 657 TYLKELIEEW 666
LI+ +
Sbjct: 483 IVYTSLIKNF 492
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNLYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ CV+A + + + + K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 112 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 171
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 172 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 230
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 231 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 290
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 291 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 350
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G KAN T L +++
Sbjct: 351 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 405
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 165/430 (38%), Gaps = 82/430 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 72 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 131
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 132 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 191
Query: 326 SYNILLKACCLAGNTVLAQEIYG--------------------EVKHLEAKGV------- 358
Y++++ AGN A++++ E + E +
Sbjct: 192 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS 251
Query: 359 -LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ DV +Y+ ++K + A+ + AL V E+ML AGV P ++ L++A A +G+VEQA
Sbjct: 252 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 311
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M + P+ +L A V A + A + F+
Sbjct: 312 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK-------------------- 351
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKAL 535
RI K F+P TY L+K A D ++ +
Sbjct: 352 RI---------------------------KVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 384
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+MR G+ N T ++DA G N AL K M G+ PD A + +
Sbjct: 385 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 444
Query: 596 SKRLKQAFSL 605
L++A L
Sbjct: 445 QDELEEAKEL 454
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 81 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 140
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ +TY +L+ E ++ D K+ K +
Sbjct: 141 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 189
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 183/436 (41%), Gaps = 67/436 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYEDLRS 284
+RE G + D A+R ++ + + S N + +I G G ++A+++
Sbjct: 159 LLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALK 218
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ +Y F++L++ ++V+ +M+ G+M ++ +YN ++ AC G
Sbjct: 219 EGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGG---- 274
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +V++F + MLS GV P+ IT++
Sbjct: 275 ---------------------VEFKKVVEIF-------------DGMLSNGVQPDRITFN 300
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--- 459
SL+ C+ GL E A LF M+ G + + N LL A + Q D AF +
Sbjct: 301 SLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK 360
Query: 460 -----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RF--- 509
++ + + G G D NM ++ K N+ S + K RF
Sbjct: 361 NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQA 420
Query: 510 ----------SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDA 557
+ TYN L+ Y V+ + EM+ +SPN ++++ LID
Sbjct: 421 LDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDV 480
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A+++ + ++ G+ DVV Y+ I ++ ++ + +L +EM I+PN
Sbjct: 481 YSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPN 540
Query: 618 LVTYITLLRARSRYGS 633
+VTY +++ A R S
Sbjct: 541 VVTYNSIIDAFGRSAS 556
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 168/377 (44%), Gaps = 53/377 (14%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S ++ + + + A+KV + M S G+ PN +T++++I+AC G+ ++ + +F
Sbjct: 225 VYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIF 284
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT----- 476
+ ML G +P+ N LL C ++ A RLF + V G D D T
Sbjct: 285 DGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA------MVDKGIDQDIFTYNTLL 338
Query: 477 DRISNMEHKDK----QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D + D S T N +PN TY+ ++ Y +V
Sbjct: 339 DAVCKGGQMDLAFEIMSEMPTKNILPN---------------VVTYSTMIDG----YAKV 379
Query: 533 KAL------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
L NEM+ +G+ + +S+ L+ G E AL + K M G+ DVV Y
Sbjct: 380 GRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTY 439
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + R + +FEEMK ++ PNL+TY TL+ S+ G L+ ++ + V+++
Sbjct: 440 NALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSK-GGLY--KEAMEVFRE 496
Query: 647 MWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQ--RPQSLLLEKVAVH 703
+AG KA+ LI+ C+ G+++ VTL + RP + +
Sbjct: 497 FKQAGLKADVVLYSALIDALCKNGLVES------SVTLLDEMTKEGIRPNVVTYNSIIDA 550
Query: 704 LQKSAAENLAIDLRGLT 720
+SA+ +D G T
Sbjct: 551 FGRSASAQCVVDDSGET 567
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 192/451 (42%), Gaps = 50/451 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A++ +D+ K + PN+ +ID CG G ++ K I++ +
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S V + FNSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI E + K +L +V TYST++ +A AL + +M GV + ++
Sbjct: 348 DLAFEIMSE---MPTKNILP-NVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVS 403
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ A G EQA+ + +EM AG + N LL + ++D R+F
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMK 463
Query: 461 LSKTQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ L Y D S +K+ + + F K+ K Y+
Sbjct: 464 RGRVSPNL-LTYSTLIDVYSKGGLYKEAMEV-----------FREF-KQAGLKADVVLYS 510
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE---------GAL 568
L+ A C + + L++EM G+ PN +++ +IDA G S + + AL
Sbjct: 511 ALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTAL 570
Query: 569 QILKIM--------------REDGMSPDVVAYTTAIKVCVRSKRLKQA----FSLFEEMK 610
Q+ + +ED ++ A K C KQ +F++M
Sbjct: 571 QVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMH 630
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+PN+VT+ +L A SR S + L
Sbjct: 631 ELKIKPNVVTFSAILNACSRCDSFEDASMLL 661
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 102/232 (43%), Gaps = 26/232 (11%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ N + +GK+ R ++ K+ SPN+ T+IDV G Y ++
Sbjct: 433 RKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + + ++ ++++L++ + ++ ++ + M K G+ ++ +YN ++ A
Sbjct: 493 VFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFG 552
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY----------STIVKVFADAKWWQMA--- 382
+ + + GE L+ + + + V + I+++F +
Sbjct: 553 RSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAK 612
Query: 383 ----------LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
L V + M + PN +T+S+++NAC+ E A L EE+
Sbjct: 613 NSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEEL 664
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G VE A + ++G V A++ I RS +A +F+ MK
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ PNLVTY ++ A + G E ++ + ++ M G + + L+
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGV--EFKKVVEIFDGMLSNGVQPDRITFNSLL 303
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +M GV ++ +YNIL++A C G+ +E ++ + G +V TY+T+V
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHR---KEALSILRDMRGAGC-GPNVVTYNTLVA 233
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A A ++ M G+ PN +T++S++N AG +E A +F+EM++ G P
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----I 479
+ N L+ +A A +F T ++ T + GN +R +
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353
Query: 480 SNMEHKDKQ--SITNTP--------NFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT- 527
M + Q +T T F+ ++ + K+ KP+ YN L+ C
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L++EM GL P+ ++++ +I A + + A ++ + M E G+ PD + Y
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ I+V KRL A LF+ M +QP+ TY +L+ + G+ V+ L+++
Sbjct: 474 SSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN---VESALSLHDK 530
Query: 647 MWKAG 651
M KAG
Sbjct: 531 MVKAG 535
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 203/474 (42%), Gaps = 51/474 (10%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
L SA R +D+ +PN+Y ++ +CG G ++ +I D+R N+ +N
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGR-GHRKEALSILRDMRGAGCGPNVVTYN 229
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L+ A ++ + M++ G+ ++ ++N ++ C AG A++++ E+
Sbjct: 230 TLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM--- 286
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L D +Y+T+V + A AL V +M G+ P+ +T++SLI+ AG
Sbjct: 287 -VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 345
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------A 467
+E+A+ L +M + G + N L+ + D A R + + A
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405
Query: 468 LGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------- 512
L Y D + + ME K + T + + +++ + D +F+
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 513 --PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+ L++ C + A L M +GL P+ ++T LID GNVE AL
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA----FSLFEE-----------MKHYQ 613
+ M + G+ PDVV Y+ I +S R +A F L+ E + H
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCC 585
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ L + + LL+ G ++E + VYQ M + + + LI C
Sbjct: 586 RKAELKSVLALLKGFCMKGLMNEADK---VYQSMLDRNWNLDGSVYSVLIHGHC 636
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 28/313 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + + MLS GV PN T++ L+ A G ++A+ +
Sbjct: 156 VLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN N L+ A A + D A RL R L V +G +
Sbjct: 215 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC-KA 273
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
ME K FD+ R P +YN L+ C +AL
Sbjct: 274 GKMEDARK----------------VFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSV 317
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P+ +++T LI +GN+E A+ +++ MRE G+ + V +T I +
Sbjct: 318 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L A MK +I+P++V Y L+ G + E ++ L +M G K +
Sbjct: 378 KGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL---HEMEAKGLKPD 434
Query: 656 DTYLKELIEEWCE 668
+I +C+
Sbjct: 435 VVTYSTIISAYCK 447
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 505 FDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
FD S P TYNIL++A C +R +AL + +MR G PN +++ L+ A
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 237
Query: 561 SGNVEGALQILKIMRE-----------------------------------DGMSPDVVA 585
+G V+GA +++ +MRE +G++PD V+
Sbjct: 238 AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T + ++ +A S+F EM I P++VT+ +L+ + G+L ++ + + +
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL---ERAVTLVR 354
Query: 646 DMWKAGYKANDTYLKELIEEWC-EGVIQD 673
M + G + N+ LI+ +C +G + D
Sbjct: 355 QMRERGLQMNEVTFTALIDGFCKKGFLDD 383
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 65/393 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I V G+ ++ + +R + + +N F +L++ L L
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + + YN L+ C+ G A+E+ E +EAKG LK DV TYSTI+
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE---MEAKG-LKPDVVTYSTIIS 443
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LF+ M++ G +P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------ 485
+ + T + G +GN + ++ K
Sbjct: 504 DE---------------------------FTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Query: 486 --DKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKAC----------C 526
D + + N + S + ++ FK P T Y+ LM C
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596
Query: 527 TDYYRVKALMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGM 579
+ +K LMNE V S +W ++LI +GNV AL K M + G
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+P+ + + I+ + + +A + +++ +Y
Sbjct: 657 APNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ IL+ A G G+ + AL
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
IL+ MR G P+VV Y T + R+ + A L M+ ++PNLVT+ +++
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G + + ++ V+ +M + G + L+ +C+
Sbjct: 271 CKAGKMEDARK---VFDEMVREGLAPDGVSYNTLVGGYCK 307
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 161/373 (43%), Gaps = 21/373 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F + F KK L AL A K+ P++ +I+ + G ++R +
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + ++ ++++++ D E+ + M + GV+ D +Y+ L++ C G
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC--G 482
Query: 339 NTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L+ H+ K ++KL D FTY++++ + AL + + M+ AGV
Sbjct: 483 EKRLSDA------HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+S LIN + + +A L ++ P + + L+ C +A +
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA-ELKSVLA 595
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---S 510
L + + + + Y DR N++ + + N + SF K+
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +T+ L++ + V+A ++ ++ + + LID GNV+ L
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVL 715
Query: 569 QILKIMREDGMSP 581
+L M +DG+ P
Sbjct: 716 DVLHGMAKDGLLP 728
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 53/417 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + G + LR D + N Y + + G + ++ A+ + +
Sbjct: 26 FISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRML 85
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S+ V L+ Y F++L+ ++ +E+ + M GV D SYN L G++
Sbjct: 86 SEGVRLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSK 145
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + A GV + D TY T++ ++ W++ + + + M S G+TPN ++
Sbjct: 146 NALLM---LEDMVADGV-RPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSF 201
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S LI AC G A+ E+M +G PN + + AC A Q++ A RL +
Sbjct: 202 SPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRL-----I 256
Query: 462 SKTQ-VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
K + +ALG + VP S TT YN
Sbjct: 257 DKLEALALGGE------------------------GVPMS--------------TTMYNF 278
Query: 521 LMKAC--CTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ AC + + AL+ M++ P+ +++ LIDAC N+E AL L MR
Sbjct: 279 GIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLEDALAYLTEMRAV 338
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G++P AY +A+ + + K+A SL +EM ++ ++ ++ ++ A + G L
Sbjct: 339 GLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQL 395
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 185/411 (45%), Gaps = 35/411 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV-- 311
P+ T++ CG G++ ++ + +RS+ +T N Y F+ L+ + ++ L V
Sbjct: 161 PDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFSPLIKACGKEGRWALAVKT 220
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG-VLKLDVFTYSTIV 370
++M+ G + ++ + + AC AG A + +++ L G + + Y+ +
Sbjct: 221 LEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGVPMSTTMYNFGI 280
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTP-NTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
A A W + + E M S TP + T+S LI+ACA +E A+ EM G
Sbjct: 281 DACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLEDALAYLTEMRAVGL 340
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------------ALGED------ 471
P + A A Q+ A L ++K ++ A G+D
Sbjct: 341 APTFFAYISAMSAIKVAGQWKEALSLLDE--MAKGRLISDVFSFYNVVDAYGKDGQLART 398
Query: 472 ---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKAC 525
N I+ + +S + N KR + ++NIL+ AC
Sbjct: 399 LVQTSANPTEIAADSENEMRSDADL-NAWRAEDPDELVKRMENNGVELDVMSFNILIDAC 457
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG--ALQILKIMREDGMSP 581
++ L+ +M+++GL PN +S+ +I +C G + E AL +L MR+ G++P
Sbjct: 458 ARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLLDEMRKSGLTP 517
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
DV+++ TAI C ++ +++ +LF MK + P++++Y ++ A ++ G
Sbjct: 518 DVISFNTAITSCAKAGDWRRSLNLFAGMKVEGVTPDILSYNAVISACAKGG 568
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 59/356 (16%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y +I+ C G+ K + ++ V + + +N+ ++ V D K L + ++
Sbjct: 94 YTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLMLED 153
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M GV D +Y LL ACC GN+ + + + ++G+ + +++S ++K
Sbjct: 154 MVADGVRPDAITYGTLL-ACC--GNSGEWKLCMSLMDRMRSEGITP-NAYSFSPLIKACG 209
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE--EMLQAGCE-- 430
W +A+K EDM ++G TPN W I AC NAG E+A+ L + E L G E
Sbjct: 210 KEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGV 269
Query: 431 PNSQCC-NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P S N + AC A ++D+ L +R+ +S
Sbjct: 270 PMSTTMYNFGIDACARAGRWDQGVALL--------------------ERM--------KS 301
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
TP P TY+ L+ AC D AL + EMR VGL+P
Sbjct: 302 NPATP------------------PDAQTYSYLIDACAKDANLEDALAYLTEMRAVGLAPT 343
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++ + A +G + AL +L M + + DV ++ + + +L +
Sbjct: 344 FFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTL 399
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 177/411 (43%), Gaps = 46/411 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFT 308
+PN Y +I CG G + + ED+ + T N + N LM + NA +
Sbjct: 195 TPNAYSFSPLIKACGKEGRWALAVKTLEDMEASGPTPNEH--NWLMAIGACGNAGQWEEA 252
Query: 309 LEVYKNMQKL-----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L + ++ L GV YN + AC AG + ++ +++ D
Sbjct: 253 LRLIDKLEALALGGEGVPMSTTMYNFGIDACARAGRWDQGVAL---LERMKSNPATPPDA 309
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A + AL +M + G+ P + S ++A AG ++A+ L +E
Sbjct: 310 QTYSYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDE 369
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA------LGEDYDGNTD 477
M + + ++ A + Q R L ++ + + T++A + D D N
Sbjct: 370 MAKGRLISDVFSFYNVVDAYGKDGQLART--LVQT-SANPTEIAADSENEMRSDADLNAW 426
Query: 478 R-------ISNMEHKDKQSITNTPNFV------PNSHYSSFD-----KRFSFKPTTTTYN 519
R + ME+ + + N + SH+++ K +P + +YN
Sbjct: 427 RAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYN 486
Query: 520 ILMKAC---CTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
++ +C + +R+ L++EMR GL+P+ IS+ I +C +G+ +L + M+
Sbjct: 487 PIIHSCRGGTDEEWRLALDLLDEMRKSGLTPDVISFNTAITSCAKAGDWRRSLNLFAGMK 546
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLL 625
+G++PD+++Y I C + + + L +++ ++ N TY + +
Sbjct: 547 VEGVTPDILSYNAVISACAKGGQWRIGLELLAKVRADPTLEANQRTYTSAI 597
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 128/345 (37%), Gaps = 85/345 (24%)
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A+ + L+ + Y++ + A + W+ AL +++ MLS GV + T+S+LI AC+ G V
Sbjct: 50 AEDGIPLNSYAYNSALSSIAKSGRWREALALRDRMLSEGVRLDGYTFSALIEACSKGGNV 109
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD- 473
+ + L EM+ AG + N L V A + + VA G D
Sbjct: 110 AKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLML------EDMVADGVRPDA 163
Query: 474 ----------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
GN+ +S M+ + IT PN+ +SF P
Sbjct: 164 ITYGTLLACCGNSGEWKLCMSLMDRMRSEGIT------PNA--------YSFSP------ 203
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------ 571
L+KAC + A+ + +M G +PN +W + I ACG +G E AL+++
Sbjct: 204 -LIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEAL 262
Query: 572 -----------------------------------KIMREDGMSPDVVAYTTAIKVCVRS 596
++ PD Y+ I C +
Sbjct: 263 ALGGEGVPMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKD 322
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L+ A + EM+ + P YI+ + A G E L
Sbjct: 323 ANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLL 367
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 45/273 (16%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ + KV W+ L++ + M G+ N+ ++S +++ A +G +A+ L + M
Sbjct: 25 SFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRM 84
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G + + L++AC + + L R E D R
Sbjct: 85 LSEGVRLDGYTFSALIEACSKGGNVAKGVELLR------------EMVDAGVARDC---- 128
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
F N+ F + K N L+ ++ +M G+
Sbjct: 129 -----------FSYNAALHGFVRNGDSK------NALL------------MLEDMVADGV 159
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ L+ CG SG + + ++ MR +G++P+ +++ IK C + R A
Sbjct: 160 RPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFSPLIKACGKEGRWALAVK 219
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
E+M+ PN ++ + A G E
Sbjct: 220 TLEDMEASGPTPNEHNWLMAIGACGNAGQWEEA 252
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL + M + G+ + +++ LI+AC GNV +++L+ M + G++ D +Y A+
Sbjct: 79 ALRDRMLSEGVRLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGF 138
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
VR+ K A + E+M ++P+ +TY TLL G+ E + C+++ M G
Sbjct: 139 VRNGDSKNALLMLEDMVADGVRPDAITYGTLLAC---CGNSGEWKLCMSLMDRMRSEGIT 195
Query: 654 ANDTYLKELIE 664
N LI+
Sbjct: 196 PNAYSFSPLIK 206
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 254 PNMYICRTIIDVC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN II C G ++ + + +++R +T ++ FN+ + A D + +L
Sbjct: 480 PNSLSYNPIIHSCRGGTDEEWRLALDLLDEMRKSGLTPDVISFNTAITSCAKAGDWRRSL 539
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV D+ SYN ++ AC G + E+ +V+ A L+ + TY++
Sbjct: 540 NLFAGMKVEGVTPDILSYNAVISACAKGGQWRIGLELLAKVR---ADPTLEANQRTYTSA 596
Query: 370 VKVF 373
+ F
Sbjct: 597 INCF 600
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 182/402 (45%), Gaps = 56/402 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+DA ++ +I G ++ + E ++ + +N++++
Sbjct: 217 ARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVID 276
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + + D ++N LL AC AG+ A+ ++ E+ HL
Sbjct: 277 ACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHL--- 333
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D++TY+T + ++A++V DM + V PN +T+S+LI+ + ++
Sbjct: 334 GIGR-DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDE 392
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+E+M G + + C N +L V+A ++ ++A+ D
Sbjct: 393 ALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYG--------------EIAIVCD----- 433
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKA 534
E +D S +K T TYN L+ V
Sbjct: 434 ------EMED----------------SGIEK------DTVTYNSLINGYGKQGRLDIVSF 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ PDVV +++ I
Sbjct: 466 LVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLA 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ A SL +M I+PN+VTY T++ A + L E
Sbjct: 526 KNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 161/359 (44%), Gaps = 38/359 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF S ++ +A + A+ V E M AG+ P T+T++++I+AC G+ + + F
Sbjct: 233 VFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYF 292
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDR 478
+ML+ P+ + N LL AC A + A LF + +G D Y+ D
Sbjct: 293 RQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFD----EMIHLGIGRDIYTYNTFIDA 348
Query: 479 I---SNMEHK-----DKQSITNTPNFVPNS----HYS---SFDKRFSFKPTTTTYNILMK 523
I N+E D ++ PN V S YS +D+ + I +
Sbjct: 349 ICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLD 408
Query: 524 ACCTD-----------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
C + Y + + +EM G+ + +++ LI+ G G ++ +++
Sbjct: 409 RVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQ 468
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
MR G++P V+ Y+T I + ++ AF+++ + K ++P++V + + + ++ G
Sbjct: 469 DMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNG 528
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-VIQDKNQNQGEVTLCRRTNSQ 690
V+ L++ DM + G K N +I+ + + V+ +++ GE+ + N Q
Sbjct: 529 L---VEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQ 584
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 162/394 (41%), Gaps = 84/394 (21%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
++Y T ID CG+ + + D+ ++NV N+ +++L++ + K+ L++Y
Sbjct: 338 DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLY 397
Query: 313 KNMQKLGVMADMASYNILLKACCLAG-------------------NTVLAQEI---YGEV 350
+ M+ LG+ D YN +L AG +TV + YG+
Sbjct: 398 EKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQ 457
Query: 351 KHLEAKGVLKLD---------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L+ L D V TYST++ +++ A A V D +G+ P+ + +
Sbjct: 458 GRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SS I+ A GLVE A+ L +M + G +PN N ++ A +S L
Sbjct: 518 SSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDA------------FGKSKVL 565
Query: 462 SKTQVALGE-----DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S+ GE Y+G R +N + + +I
Sbjct: 566 SEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSAI-------------------------- 599
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ M+ + Y + L +M G+ PN ++++ +++AC N E A +L+ +R
Sbjct: 600 --DVRMRR-SQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRL 656
Query: 577 DGMSPDVVAYTTAIKVCVRSKRL-KQAFSLFEEM 609
D Y A + + + + QA SLF ++
Sbjct: 657 F----DNFVYGVAYGLLMGYQEIWSQAQSLFNQL 686
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 222 ILFCNFVREFGK--KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ + + + +GK + D+VS L D ++ ++ P++ T+ID+ G + + +Y
Sbjct: 445 VTYNSLINGYGKQGRLDIVSFL-VQDMRRRGVA-PSVLTYSTLIDIYSKAGMHGDAFNVY 502
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
D + + ++ +F+S ++ A + +++ L + +M ++G+ ++ +YN ++ A
Sbjct: 503 LDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDA--FG 560
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--------ALKVKEDM 389
+ VL++E E + GV + + V A +M L++ + M
Sbjct: 561 KSKVLSEED-PEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKM 619
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ GV PN +T+S+++NAC+ E A L E++
Sbjct: 620 VQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 654
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 194/472 (41%), Gaps = 93/472 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 273 LVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEEL 332
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 333 RQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 392
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + E++ G ++ + F +S ++ + D WQ +V ++M S GV P+
Sbjct: 393 ESARIVLKEME----TGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQF 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 496
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 497 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 521
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 522 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 581
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 582 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 641
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G K +
Sbjct: 642 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPGVYEEMIMSGCKPD 690
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 215/502 (42%), Gaps = 69/502 (13%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ TL +N+L+ A +D++ L + M++ G +D +Y+++
Sbjct: 181 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLV 240
Query: 331 LKAC--CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ C ++V+ Q +Y E++ + L+LDV + I+ FA + AL++
Sbjct: 241 IQSLTRCNKIDSVMLQRLYKEIE----RDKLELDVQLVNDIIMGFAKSGDPSRALQLLGM 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ G++ T T S+I+A AN+G +A LFEE+ Q+G +P ++ N LL+ V+
Sbjct: 297 AQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGP 356
Query: 449 FDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR-------ISNMEHKDKQSITNTPN- 495
A + R + + +L D N R + ME D Q PN
Sbjct: 357 LKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQ-----PNS 411
Query: 496 FVPNSHYSSFDKR---------------FSFKPTTTTYNILM----KACCTDYYRVKALM 536
FV + + + R KP YN+++ K C D+
Sbjct: 412 FVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH--AMTTF 469
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M + G+ P+ ++W LID G A ++ + M G P Y I
Sbjct: 470 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 529
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+R L +MK I PN+VT+ TL+ + G ++ +CL ++M G K +
Sbjct: 530 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL---EEMKSVGLKPSS 586
Query: 657 TYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDL 716
T LI + + + ++ N V ++ +P L L N I+
Sbjct: 587 TMYNALINAYAQRGLSEQAVNAFRVMT---SDGLKPSLLAL-------------NSLINA 630
Query: 717 RGLTKVEARIIVLAVLRMMKEN 738
G + +A AVL+ MKEN
Sbjct: 631 FGEDRRDAE--AFAVLQYMKEN 650
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 409 PNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 468
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 469 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 524
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 525 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 584
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 585 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 639
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 640 AFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKP 689
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 690 DRKARSMLRSA 700
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 172 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLISRMRQ 227
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAF--SLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ R ++ L++E++ +++ ++ ++ ++ G
Sbjct: 228 DGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 287
Query: 635 HEVQQCLAVYQ 645
Q L + Q
Sbjct: 288 SRALQLLGMAQ 298
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 200/437 (45%), Gaps = 28/437 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL A + K+ +P++ ++ID G G + I+E ++ + ++
Sbjct: 68 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 127
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N + E M+ G+ ++ +Y+ + A C G A + + ++
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + FTY++++ A ALK+ E++L AG+ N +T+++L++
Sbjct: 188 RRV----ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LS 462
G +++A +F ML AG PN + L+ ++A + + A + + L
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ G + + + + K+S NT + + + D F T +L
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI---YTTLMDAYFKSGQATEALTLLE 360
Query: 523 KA-------CCTDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ C + + V K L +EM G+ P+ I++T LID GN++ AL + M
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E GM D+ AYT I S ++++A +L +EM + P+ V Y+ L++ +Y +L
Sbjct: 421 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK---KYYAL 477
Query: 635 HEVQQCLAVYQDMWKAG 651
+V + L + +M K G
Sbjct: 478 GKVDEALELQNEMAKRG 494
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 174/416 (41%), Gaps = 59/416 (14%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VY 312
Y+C+ GD +R+++ ++ T +I +NSL ++ H L+ ++
Sbjct: 65 YLCKE--------GDLEMARSLFTQMKEAGFTPDIVTYNSL--IDGHGKLGLLDECICIF 114
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M+ D+ +YN L+ C A E E+K A G LK +V TYST +
Sbjct: 115 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK---ANG-LKPNVVTYSTFIDA 170
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F Q A+K DM +TPN T++SLI+A AG + +A+ L EE+LQAG + N
Sbjct: 171 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSI 490
LL E + A +FR+ L N + + + H + +
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAM--------LNAGVAPNQETYTALVHGFIKAKEM 282
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
+ + K KP Y ++ C + K L+ E++ G++ N
Sbjct: 283 EYAKDILKEM------KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 336
Query: 549 ISWTILIDACGGSGNVEGALQILK-----------------------IMREDGMSPDVVA 585
+ +T L+DA SG AL +L+ M + GM PD +A
Sbjct: 337 VIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 396
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YT I ++ L++A +L + M ++ +L Y L+ S G + + + L
Sbjct: 397 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 452
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 53/320 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M+K V S N LL G L+++ + K + A G+ K VFTY+ +
Sbjct: 7 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF---KDMGAAGI-KRSVFTYNIM 62
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +MA + M AG TP+ +T++SLI+ GL+++ + +FE+M A C
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ C C+F+R + F H+ K +
Sbjct: 123 DPDVITYNALIN-CF--CKFERMPKAFEFL------------------------HEMKAN 155
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
KP TY+ + A C + +A+ +MR V L+PN
Sbjct: 156 --------------------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 195
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T LIDA +GN+ AL++++ + + G+ +VV YT + R+K+A +F
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M + + PN TY L+
Sbjct: 256 AMLNAGVAPNQETYTALVHG 275
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
K + TYNI++ C D ++L +M+ G +P+ +++ LID G G ++
Sbjct: 51 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 110
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ I + M++ PDV+ Y I + +R+ +AF EMK ++PN+VTY T + A
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G L Q+ + + DM + N+ LI+ C+
Sbjct: 171 FCKEGML---QEAIKFFVDMRRVALTPNEFTYTSLIDANCKA 209
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 53/278 (19%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K +DM +AG+ + T++ +I+ G +E A LF +M +AG P+ N L+
Sbjct: 42 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 101
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ D +F D + D
Sbjct: 102 GKLGLLDECICIFEQMK------------DADCD-------------------------- 123
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L+ C KA ++EM+ GL PN ++++ IDA
Sbjct: 124 ---------PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 174
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A++ MR ++P+ YT+ I ++ L +A L EE+ I+ N+VTY
Sbjct: 175 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTY 658
LL G + E ++ V++ M AG N +TY
Sbjct: 235 TALLDGLCEEGRMKEAEE---VFRAMLNAGVAPNQETY 269
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 208/523 (39%), Gaps = 105/523 (20%)
Query: 114 EMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKL 157
+M A+GI +S+ +EG ++ + ++ E G P L DG G
Sbjct: 46 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 105
Query: 158 LKNEC----QRLLDSG---EVEMFVGLMEVLEEF-RLP-VKELDEEFRIVQLCVNKPDVN 208
L +EC +++ D+ +V + L+ +F R+P E E + L KP+V
Sbjct: 106 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL---KPNV- 161
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
+ + F+ F K+ L A++ + ++ +PN + ++ID
Sbjct: 162 -------------VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMAS 326
G+ ++ + E++ + LN+ + +L++ + +K EV++ M GV + +
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 268
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y L+ A A++I E+K + +K D+ Y TI+ + + A +
Sbjct: 269 YTALVHGFIKAKEMEYAKDILKEMK----EKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ +G+ N + +++L++A +G +A+ L EEML +++ C
Sbjct: 325 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML-----------DLVDGLCKNN 373
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C F+ A +LF L K + Y D NM+H + Q N
Sbjct: 374 C-FEVAKKLFDEM-LDKGMMPDKIAYTALID--GNMKHGNLQEALN-------------- 415
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
L + M +G+ + ++T LI SG V+
Sbjct: 416 ----------------------------LRDRMIEIGMELDLHAYTALIWGLSHSGQVQK 447
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +L M G+ PD V Y IK ++ +A L EM
Sbjct: 448 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 490
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +M G+ + ++ I+ID G++E A + M+E G +PD+V Y + I
Sbjct: 41 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 100
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L + +FE+MK P+++TY L+ ++ + + +M G
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF---ERMPKAFEFLHEMKANGL 157
Query: 653 KANDTYLKELIEEWC-EGVIQD 673
K N I+ +C EG++Q+
Sbjct: 158 KPNVVTYSTFIDAFCKEGMLQE 179
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+MR + P S L+ G + + + K M G+ V Y I +
Sbjct: 11 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 70
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
L+ A SLF +MK P++VTY +L+ + G L E C+ +++ M A +
Sbjct: 71 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE---CICIFEQMKDADCDPDVI 127
Query: 658 YLKELIEEWCE 668
LI +C+
Sbjct: 128 TYNALINCFCK 138
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 52/404 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ C ++I G C G K+ I E L + ++ +N L+ + ++ L
Sbjct: 140 PDVIACTSLIR--GFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL 197
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V ++++ V D+ +YN +L++ C +G A E+ E DV TY+ +
Sbjct: 198 QV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP----DVITYTIL 250
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+K+ ++M G P+ +T++ LIN G +++A+ M GC
Sbjct: 251 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGC 310
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVA-------------LGEDYD 473
+PN NI+L++ ++ A RL S + V LG D
Sbjct: 311 QPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID 370
Query: 474 GNTDRISNMEHKDKQS-ITNTPNFVPNSHYSSFDKRFSFK-------------PTTTTYN 519
+E K + N+ ++ P H +K+ P TYN
Sbjct: 371 -------VLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A C D A ++N++ + G SP I++ +ID G E A ++L+ MR
Sbjct: 424 TLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ PD++ Y+T ++ ++ +A +F +M+ I+P+ VTY
Sbjct: 484 GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+L+ C +G EI ++ LE V DV TY+TI++
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSG------EIDKALQVLERMSVAP-DVVTYNTILRSLC 220
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + + P+ IT++ LI A N V QAM L +EM + GC+P+
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------VALGEDYDGNTDRISN 481
N+L+ + + D A + + L Q + G D +++
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER-LLAD 339
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K + P + +YN L+ C +
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ + M + G P+ +++ L+ A G + A++IL + G SP ++ Y T
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + A L EEM+ ++P+++TY TLLR G +V + + ++ DM
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG---LGCEGKVDEAIKIFHDM 515
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK E M+ G P+ I +SLI +G +A + E + +G P+ N+L+
Sbjct: 126 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIG 185
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ + D+A ++
Sbjct: 186 GYCKSGEIDKALQVL--------------------------------------------- 200
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTILIDAC 558
+R S P TYN ++++ C D ++K M + P+ I++TILI+A
Sbjct: 201 -----ERMSVAPDVVTYNTILRSLC-DSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 254
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G PDVV Y I + RL +A M Y QPN+
Sbjct: 255 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNV 314
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+T+ +LR+ G + ++ LA DM + G + LI C
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLA---DMLRKGCSPSVVTFNILINFLC 360
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G + R + S R DA +
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + N +N L++
Sbjct: 336 LLADMLRKGCSPSVVTFNILINF--LCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHG 393
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K +E + M G D+ +YN LL A C G A EI + L +KG
Sbjct: 394 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI---LNQLSSKGC 450
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A ++ E+M G+ P+ IT+S+L+ G V++A+
Sbjct: 451 SPV-LITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+F +M +P++ N ++ +A Q RA
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 544
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+KR L A+ + KH PN ++ G C + RAI E + S+ +
Sbjct: 361 RKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH--GFCQEKKMDRAIEYLEIMVSRGCYPD 418
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L+ D K +E+ + G + +YN ++ G T A E+
Sbjct: 419 IVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E++ KG LK D+ TYST+++ A+K+ DM + P+ +T+++++
Sbjct: 479 EMRR---KG-LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A +A+ M++ GC+P IL++
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P L++ C KA +M + G P+ I++ +LI SG ++ ALQ+
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M ++PDVV Y T ++ S +LK+A + + + P+++TY L+ A
Sbjct: 200 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V Q + + +M K G K + LI C+
Sbjct: 257 DSG---VGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E L+ L+ M G PDV+A T+ I+ RS + ++A + E +++ P+++T
Sbjct: 120 NGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVIT 179
Query: 621 YITLLRARSRYGSLHEVQQCL 641
Y L+ + G + + Q L
Sbjct: 180 YNVLIGGYCKSGEIDKALQVL 200
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 181/421 (42%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 431 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 490
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 491 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 546
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 547 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 606
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 607 DIGKAFEYF-------TKI----------------------------------------K 619
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 679
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 680 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 739
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ +R +C +++M AG K ++ L+ + + + G +++C
Sbjct: 740 KGWARVSLPDRALKC---FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVC 796
Query: 685 R 685
R
Sbjct: 797 R 797
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 493 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 553 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 612
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 613 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 668
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 669 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 728
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 729 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 761
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 589 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 648
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 649 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGV-PPNIHTYTSYI 704
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 705 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 764
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 765 PDEASYHCLVTS 776
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 599 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 658
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 659 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 718
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 719 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 774
Query: 406 NA 407
+
Sbjct: 775 TS 776
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 60/349 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 266 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 324
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L R + E
Sbjct: 325 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE---------MEE 375
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 376 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 429
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 430 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 489
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 490 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 549
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TY 658
P ++TY L+ R H+VQ+ ++V M AG N+ TY
Sbjct: 550 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAGITPNEHTY 595
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 40/192 (20%)
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TY+IL+ A D L E +T S N I ++ +I A SGN+E A +++
Sbjct: 311 TIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV 370
Query: 572 KIMREDGMS-----------------------------------PDVVAYTTAIKVCVRS 596
+ M EDG+ P +++Y + + V+
Sbjct: 371 REMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKI 430
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++ +A S+ +EM+ I+ N TY L+ + LH+ A++++M ++G + +
Sbjct: 431 GKVAKALSISKEMESCGIKHNNKTYSMLING---FIHLHDFANAFAIFEEMLRSGLQPDR 487
Query: 657 TYLKELIEEWCE 668
LIE +C+
Sbjct: 488 AIYNLLIEAFCK 499
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 79/167 (47%), Gaps = 7/167 (4%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 298
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 299 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 358
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ G++ ++ + ++M + G A ++ + +IQ++N+
Sbjct: 359 QSGNMERAEELV---REMEEDGIDAPIDVYHSMMHGYT--IIQNENK 400
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 64/387 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + NIY N L+N H L F V + KLG ++A++N
Sbjct: 75 YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 134
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L++ C+ G GEV HL K + + +V TY T++ A+++
Sbjct: 135 LIRGLCVEGKI-------GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + ++S+I++ V QA +LF EM+ G P+ N L+ A
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C++ L SK
Sbjct: 248 CEWKHVTALLNEMVNSKIM----------------------------------------- 266
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P ++ ++ A C + ++A +++ M G+ PN +++ L+D +
Sbjct: 267 ------PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ M G +PDVV+Y+T I + +R+++A LFEEM ++ PN VTY TL
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L Q +A++ +M G
Sbjct: 381 MHGLCHVGRL---QDAIALFHEMVTRG 404
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 180/414 (43%), Gaps = 39/414 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T+I G+C G + +++ + + N+ + +L+N +
Sbjct: 127 PNIATFNTLIR--GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ ++M++ D+ Y ++ + C A ++ E+ H +G+ +FTY+++
Sbjct: 185 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH---QGI-SPSIFTYNSL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ + +M+++ + PN + +S++++A G V +A + + M++ G
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEH 484
EPN N L+ + D A ++F + + V+ +G RI +
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRT 541
++ R P T TY+ LM C R++ AL +EM T
Sbjct: 361 LFEEMC-----------------RKELIPNTVTYSTLMHGLC-HVGRLQDAIALFHEMVT 402
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ +S+ IL+D + ++ A+ +LK + M PD+ YT I R+ L+
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A LF + + PN+ TY ++ + G L E + ++ +M + GY N
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK---LFGEMKRKGYSPN 513
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 193/447 (43%), Gaps = 67/447 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D ++A ++ ++ Q ++ +I+ +NS
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 239
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M ++ ++ ++ A C G + A ++ V +
Sbjct: 240 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV---VDMMI 296
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G P+ +++S+LIN +
Sbjct: 297 KRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+AM+LFEEM + PN+ + L+ + A LF +++ Q+
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM-VTRGQI-------- 406
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P+FV +Y IL+ C +
Sbjct: 407 -------------------PDFV-------------------SYCILLDYLCKNRRLDEA 428
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A + + G+ P+V YT I
Sbjct: 429 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 488
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L +A LF EMK PN TY + R R +E + + + Q+M G+
Sbjct: 489 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN---NETLRGIQLLQEMLARGF 545
Query: 653 KAN---DTYLKELIEEWCEGVIQDKNQ 676
A+ T L E++ + +G+ Q Q
Sbjct: 546 SADVSTSTVLVEMLSD--DGLDQSVKQ 570
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 180/434 (41%), Gaps = 69/434 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ A+
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC-EWKHVTALLN 258
Query: 281 DLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ + + N+ +F+++++ + AHD V M K GV ++ +YN L+
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD------VVDMMIKRGVEPNVVTYNALMD 312
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL A +++ + KG DV +YST++ + + + A+ + E+M
Sbjct: 313 GHCLRSEMDEAVKVFDT---MVCKGFAP-DVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 368
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ PNT+T+S+L++ + G ++ A+ LF EM+ G P+ ILL + + D A
Sbjct: 369 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 428
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ++ +G SNM+
Sbjct: 429 IALLKA-------------IEG-----SNMD----------------------------- 441
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P Y I++ C + + L + + + GL PN ++TI+I+ G + A ++
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G SP+ Y + +R+ + L +EM ++ T L+ S
Sbjct: 502 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 561
Query: 631 YGSLHEVQQCLAVY 644
G V+Q L+ +
Sbjct: 562 DGLDQSVKQILSEF 575
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +P T+N L++ C + V L ++M G PN +++ LI+ G+
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++L+ M + PDVV YT+ I + +++ QAF+LF EM H I P++ TY +L+
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKN 675
A +L E + A+ +M + N +++ C EG + + +
Sbjct: 242 HALC---NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 289
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + N+ +I ++ +++ A +L+ +++ N+ G+ ++ +Y I++
Sbjct: 430 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A +++GE+K KG + TY+ I + F +++ ++ML+ G
Sbjct: 490 CQQGLLAEASKLFGEMKR---KGY-SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 545
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + T + L+ ++ GL + + E LQ
Sbjct: 546 SADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 181/421 (42%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 452 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 511
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 512 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 567
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 568 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 627
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 628 DIGKAFEYF-------TKI----------------------------------------K 640
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 700
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 701 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 760
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ +R +C +++M AG K ++ L+ + + + G +++C
Sbjct: 761 KGWARVSLPDRALKC---FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVC 817
Query: 685 R 685
R
Sbjct: 818 R 818
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 514 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 574 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 633
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 634 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 689
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 690 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 749
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 750 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 782
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 610 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 669
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 670 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGV-PPNIHTYTSYI 725
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 726 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 785
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 786 PDEASYHCLVTS 797
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 620 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 679
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 680 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 739
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 740 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 795
Query: 406 NA 407
+
Sbjct: 796 TS 797
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 144/349 (41%), Gaps = 60/349 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 287 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 345
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L + E
Sbjct: 346 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV---------CEMEE 396
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 397 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 450
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 451 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 510
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 511 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 570
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TY 658
P ++TY L+ R H+VQ+ ++V M AG N+ TY
Sbjct: 571 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAGITPNEHTY 616
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TY+IL+ A D L E +T S N I ++ +I A SGN+E A +++
Sbjct: 332 TIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV 391
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M EDG+ + Y + + + + +FE +K +P++++Y LL + Y
Sbjct: 392 CEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL---NLY 448
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +V + L++ ++M G K N+ LI
Sbjct: 449 VKIGKVAKALSISKEMESCGIKHNNKTYSMLI 480
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 319
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 320 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 379
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 380 QSGNMERAEE 389
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 193/507 (38%), Gaps = 95/507 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ R ++ C G + + I + ++ N +FNSL++ + D + ++
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKL 371
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV------LAQEIYGEVKHLE----------- 354
+K M K G YNI + + C L ++ Y E+ L
Sbjct: 372 FKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431
Query: 355 ---------------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
KG + D TYS ++ DA + A + E+M G
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDS-TYSKVIGFLCDASKVEKAFSLFEEMKRNG 490
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++ LI++ AGL++QA F+EML GC PN L+ A ++A Q A
Sbjct: 491 IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVAD 550
Query: 454 RLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF L + T + G G ++ + + + I ++ Y
Sbjct: 551 ELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESS----DMDKYFKL 606
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSG 562
D P TY L+ C RVK L++ M G PN I + +ID G
Sbjct: 607 DHNNCEGPNVITYGALVDGLCKA-NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL----------------------- 599
++ A ++ M E G SP++ Y++ I + RL
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725
Query: 600 ------------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+A+ L +M+ PN+VTY ++ +G +++QCL +++DM
Sbjct: 726 EMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG---FGKSGKIEQCLELFRDM 782
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDK 674
G N + LI C + D+
Sbjct: 783 CSKGCAPNFITYRVLINHCCSNGLLDE 809
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 61/379 (16%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+A ++ +++ M++ G++ + +Y IL+ + C AG A++ + E+ H KG
Sbjct: 472 DASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH---KGCTP 528
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ + AK +A ++ E ML G PN +T+++LI+ AG +E+A +
Sbjct: 529 -NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQI 587
Query: 421 FEEML---------------QAGCE-PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+ M CE PN L+ +A + A L T
Sbjct: 588 YARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELL------DT 641
Query: 465 QVALGED-----YDGNTDRISNM-EHKDKQSI---TNTPNFVPNSH-YSSF------DKR 508
+A G + YD D + + +D Q + + + PN + YSSF D R
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 509 F-------------SFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISW 551
S P Y ++ C TD LM +M G +PN +++
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD--EAYKLMLKMEEKGCNPNVVTY 759
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T +ID G SG +E L++ + M G +P+ + Y I C + L +A+ L +EMK
Sbjct: 760 TAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819
Query: 612 YQIQPNLVTYITLLRARSR 630
+++++ ++ S+
Sbjct: 820 TYWPKHILSHRKIIEGFSQ 838
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 56/381 (14%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M G + D ++Y+ ++ C A A ++ E+K G++ V+TY+ ++ F
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR---NGIVP-SVYTYTILIDSFC 506
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-- 432
A Q A K ++ML G TPN +T+++LI+A A + A LFE ML GC+PN
Sbjct: 507 KAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV 566
Query: 433 ---------------SQCCNIL--LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG- 474
+ C I ++ +E+ D+ F+L + + G DG
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 475 -NTDRISNMEHKDKQSITNT-------PN-FVPNSHYSSFDK---------------RFS 510
+R+ K+ + +T PN V ++ F K
Sbjct: 627 CKANRV-----KEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 511 FKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P TY+ + D V ++++M +PN + +T ++D G + A
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ M E G +P+VV YT I +S +++Q LF +M PN +TY L+
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801
Query: 629 SRYGSLHEVQQCL-AVYQDMW 648
G L E + L + Q W
Sbjct: 802 CSNGLLDEAYKLLDEMKQTYW 822
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 169/425 (39%), Gaps = 76/425 (17%)
Query: 293 VFNSLM-----NVNAHD---LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VF+ L+ NVNA D LKF +E+ + +L N L++ CC G +A
Sbjct: 141 VFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRL----LNFLVRKCCRNGWWNMAL 196
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG----------- 393
E G +K K TY+ +++VF A A VK +MLS
Sbjct: 197 EELGRLKDFGYKPSQT----TYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCF 252
Query: 394 ----------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
P+T+ ++ +++ A L E+AM + M + C P
Sbjct: 253 AYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N ILL C+ Q R R+ + + E N + +++ H +S
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRIL--------SMMITEGCYPNREIFNSLIHAYCKSRD 364
Query: 492 NTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYR--------VKALMNEMRT 541
+ Y F K + +P YNI + + C++ + V+ +EM
Sbjct: 365 YS------YAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLD 418
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G+ N ++ + G+G + A +I+ M G PD Y+ I + ++++
Sbjct: 419 LGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEK 478
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AFSLFEEMK I P++ TY L+ + + G +QQ + +M G N
Sbjct: 479 AFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL---IQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 662 LIEEW 666
LI +
Sbjct: 536 LIHAY 540
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
D H PN + +ID G C G ++ ++ + + + N+Y ++S ++
Sbjct: 640 DTMLAHGCEPNQIVYDAVID--GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697
Query: 303 HD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
D L L+V M + ++ Y ++ C G T E Y + +E KG
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT---DEAYKLMLKMEEKGC-N 753
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ F + + L++ DM S G PN IT+ LIN C + GL+++A L
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 421 FEEMLQA 427
+EM Q
Sbjct: 814 LDEMKQT 820
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 58/460 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ TII+ I G K+ ++L +Q + + + +L+N + + +K L +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K V ++ Y+ L+ C G + G + +G+L LD TY++++
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDG---FVSDALGLCSQIGERGIL-LDAVTYNSLID 238
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL------------------ 413
WQ ++ M+ V P+ T++ LI+A G
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 414 -----------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
V +A LF M++ G EP+ N+L+ + D A LF
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ +K V Y+ D + N I++ + H S+ P
Sbjct: 359 KELC-NKNLVPTIASYNSLIDGLCN-----SGRISHVKKLLDEMHGSAQ------PPDVV 406
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ A C + ++AL + M G+ PN +++ ++D NV A I M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD++ Y I +++ + +A LF+EM+H + P++ +Y +L+ G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
VQ+ L +M +G + L++ +C+ DK
Sbjct: 527 PHVQELL---DEMCDSGQSPDVITYNILLDAFCKTQPFDK 563
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 200/469 (42%), Gaps = 32/469 (6%)
Query: 210 AIRYACIVPRADI---LFCNFVREFGKK----RDLVSALRAYDASKKHLSSPNMYICRTI 262
IRYA +P+ I F +F + K R++ A+ ++ + P + +
Sbjct: 4 PIRYA--IPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKL 61
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G Y + +++ L+S+ ++ +I F L+N H F + + K G
Sbjct: 62 LGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGY 121
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++N ++ C+ G A + ++L A+G L D FTY T++ + +
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDF---CQNLLAQGYL-FDQFTYGTLINGLSKNGQIK 177
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL + ++M + V PN + +S+LI+ G V A+ L ++ + G ++ N L+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
C ++ +L +DY N + + K+ + +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNI--LIDALCKEGRILE------AQG 286
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ KR KP TYN LM+ C+ + + + L N M GL P+ +++ +LID
Sbjct: 287 VLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ V+ A+ + K + + P + +Y + I S R+ L +EM P++
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
VTY L+ A + G + E L V M K G K N +++ +C
Sbjct: 406 VTYNILIDALCKEGRILEA---LGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 202/480 (42%), Gaps = 39/480 (8%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQK 317
++ID C G + + + + +NV + Y FN L++ + + LE V M K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI-LEAQGVLAMMSK 293
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G D+ +YN L++ C N A+E++ + K L+ DV Y+ ++ + K
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRM----VKRGLEPDVLNYNVLIDGYCKTK 349
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + +++ + + P +++SLI+ N+G + L +EM + P+ N
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 438 ILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
IL+ A C E R+ + + + G + ++ D + N N
Sbjct: 410 ILIDALCKEG-------RILEALGVLVMMMKKGV----KPNIVTYNAMMDGYCLRNNVN- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
V ++ K +P YN+L+ C +A L EMR L P+ S+ L
Sbjct: 458 VAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID G + ++L M + G SPDV+ Y + +++ +A SLF ++ I
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GI 575
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
P+ T ++ + L + L + + G N LI C +D
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDAL---KHLLMHGCSPNVQTYTILINALC----KDG 628
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEK--VAVHLQKS---AAENLAIDL--RGLTKVEARII 727
+ + + L + ++ RP + + + V LQ++ AE L ++ RGL +E R++
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKRLM 688
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ ++ L+ A Y +L ++++ G+SP+ ++TILI+ + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L + + G P++V + T I + + +A + + + TY TL+ S+
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
G +++ L + Q+M K+ + N LI+ C +G + D
Sbjct: 173 NG---QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ +NS++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN N ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + ++ + +M G + + +I+ C+
Sbjct: 456 IFDKWDKAKELIL---EMLDRGICLDTIFFNSIIDSHCK 491
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 18/253 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +P+ T+I + G + +E
Sbjct: 379 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKACC 335
+ + ++ V+NSL+ H L E+ M G+ D +N ++ + C
Sbjct: 435 MIDERLSPGNIVYNSLI----HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +++++ L + +K ++ TYST++ + A A K+ M+S G+
Sbjct: 491 KEGRVIESEKLF----DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+++LIN +E A+ LF EM +G P+ NI+LQ + + A L
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 456 FRSWTLSKTQVAL 468
+ T S TQ+ L
Sbjct: 607 YVGITESGTQLEL 619
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV ++ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + PN+ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 214/517 (41%), Gaps = 90/517 (17%)
Query: 225 CNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CNF+ EF + D V + A ++ +K + ++ TI I G + + +R
Sbjct: 125 CNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LN Y +N L++ + + LEVY+ M G+ + +Y+ L+ A G
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKKR 241
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ + +K +E G L+ +V+T++ ++V A A ++ M G P+ +T+
Sbjct: 242 DSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--- 458
+ LI+A NAG +E A LF +M G +P+ LL + D F+ F S
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD-TFKEFWSQME 359
Query: 459 ----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD- 506
+T+ + D+D + + + KQ I +PN H Y++
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFD---EAFATFDVMRKQGI------LPNLHTYNTLIC 410
Query: 507 ------------------KRFSFKPTTTTYNILMK------------------------- 523
+ +PT TYNI +
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVP 470
Query: 524 ---ACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
AC Y + K + N +R GL+P+ +++ +++ G V+ A+ +L
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M +G PDV+ + I ++ R+ +A+ +F+ MK ++ P +VTY TLL +
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G VQ+ + +++ M + N L++ +C+
Sbjct: 591 G---RVQKAIELFESMIEKKCSPNTISFNTLLDCFCK 624
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 56/348 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++K+M+ +G D ++N+LL +G E+Y E+ K D TY+ +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP----DAITYNIV 864
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + AL D++S+ P T+ LI+ A G +E+AM LFEEM GC
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN NIL+ + + A +LF+ R+ N
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFK--------------------RMVNE------- 957
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+P +Y IL+ C +AL NE+++ GL P+
Sbjct: 958 --------------------GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +I+ G S +E AL + MR G+ PD+ Y + + + ++QA ++E
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
E++ ++P++ TY L+R Y + VY++M G N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG---YSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 185/445 (41%), Gaps = 91/445 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F V K RD A +D +K PN++ T+I CG+
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGL------------- 412
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ A ++ L++ M+ +GV +YNI + +G T
Sbjct: 413 ------------------LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETG 454
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E + ++K AKG++ ++ + + A+ + A + + G+ P+++T+
Sbjct: 455 KAVETFEKMK---AKGIVP-NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ + G V++A++L EM++ GCEP+ N L+ + +A + D A+++F
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF----- 565
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
DR+ +M+ PT TYN L
Sbjct: 566 ---------------DRMKDMK---------------------------LSPTVVTYNTL 583
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + KA L M SPN IS+ L+D + VE AL++ M
Sbjct: 584 LSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV+ Y T I ++ ++ AF F ++K + P+ VT TLL + G ++
Sbjct: 644 KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCG---QIGD 699
Query: 640 CLAVYQD-MWKAGYKANDTYLKELI 663
+++ +D M++ ++ N ++ ++L+
Sbjct: 700 AISIARDFMYQVRFRVNRSFWEDLM 724
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + + + A + +DM + G P+ T++ L+ +G + + L++EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
+ C+P++ NI++ + ++ D+A F S T G DG ++
Sbjct: 850 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG-LAKVGR 908
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+E + F S Y KP +NIL+ D L M
Sbjct: 909 LEEAMRL-------FEEMSDYGC-------KPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL+D +G V+ AL ++ G+ PD +AY I +S+R+
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++A +L+ EM++ I P+L TY +L+ G V+Q +Y+++ AG + +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM---VEQAKRMYEELQLAGLEPD 1067
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 47/459 (10%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ L C +R G+ D AL+ + P Y ID G G+ K+ +E
Sbjct: 406 NTLICGLLRA-GRIED---ALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFE 461
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ + NI N+ + A L+ ++ +++ G+ D +YN+++K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA----KWWQMALKVKEDMLSAGV 394
A + E+ + + DV ++++ A + WQM ++K+ LS
Sbjct: 522 QVDEAVNLLSEM----IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS--- 574
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +T+++L++ G V++A+ LFE M++ C PN+ N LL + + + A +
Sbjct: 575 -PTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALK 633
Query: 455 LFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVP 498
+F T L+ V G + + H+ K+S+ T P V
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVK 693
Query: 499 NSHYS-------SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHI 549
F + F+ + + LM + KA++ E+ G+
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753
Query: 550 SWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
L+ A QI K ++ G+SP + +Y I + ++A+ LF++
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK+ P+ T+ LL + G + E+ +Y++M
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITEL---FELYKEM 849
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + +GK D +A + + P++ ++D + G ++ + +L
Sbjct: 930 IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + +N ++N + ++ L +Y M+ G++ D+ +YN L+ LAG
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ +Y E L+ G L+ DVFTY+ +++ ++ ++ + A V ++M+ G PN T
Sbjct: 1050 EQAKRMYEE---LQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 401 WSSLIN 406
++ L N
Sbjct: 1106 YAQLPN 1111
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
++ ++N+MR G N S+ LI SG AL++ + M +G+ P + Y+ +
Sbjct: 175 QMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALM 234
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + + L +EM+ ++PN+ T+ +R R G + E + +++ M
Sbjct: 235 VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE---IFRRMDDE 291
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLL 696
G + LI+ C + +N E+ + + N +P ++
Sbjct: 292 GCGPDLVTYTVLIDALCNA---GQLENAKELFVKMKANGHKPDQVI 334
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 187/418 (44%), Gaps = 49/418 (11%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C D MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 188 CFDMMKEKGVVPKIETFNAMLSLF-----LKLNQTETVWVL--YAEMFRLKIKSTVYTFN 240
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G +++L GV K +V TY+T++ + + A V +
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENL---GV-KPNVVTYNTVIHGYCSRGRVEGARMVLDI 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + GV P++ T+ SLI+ G +E+A + E+M + G P + N L+
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNMEHKDKQSITNTPNFVPN 499
+AF +R + + + Y +G D M S VP+
Sbjct: 357 LVKAFG-YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-----GIVPD 410
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
S TYNIL+ C KA L +EM + G+ P +++T LI
Sbjct: 411 S---------------ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYV 455
Query: 558 CGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
++ A + KI+RE G SPD++ + I + L +AF+L +EM I P
Sbjct: 456 LSKRNRMKAADDLFEKIIRE-GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP 514
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ VTY TL++ R R G + E ++ L ++M + G + + LI + + G I D
Sbjct: 515 DEVTYNTLMQGRCREGKVEEARELL---KEMKRRGIRPDHISYNTLISGYSKRGDIND 569
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 160/389 (41%), Gaps = 59/389 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
D K P+ Y ++I G+C G ++ I E ++ + +N+L++
Sbjct: 295 DIMKNRGVEPDSYTYGSLI--SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYC 352
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N DL M + ++ +++YN+L+ A L G E G +K + G++
Sbjct: 353 NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKM---DEADGMIKDMGDSGIVP 409
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D TY+ ++ + + A + ++M+S G+ P +T++SLI + ++ A L
Sbjct: 410 -DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FE++++ G P+ N L+ DRAF L +
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM--------------------- 507
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
DK++I P TYN LM+ C + + L+ E
Sbjct: 508 -----DKRNIV---------------------PDEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ P+HIS+ LI G++ A I M G +P ++ Y I+ ++++
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
A L +EM I P+ TY +L+
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K+ + +A ++ + +SP++ + +ID G+ ++ A+ ++
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ + +N+LM + K E+ K M++ G+ D SYN L+ G+
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A I E+ + L TY+ +++ + +A ++ ++M+S G+TP+
Sbjct: 567 INDAFTIRDEMLSIGFNPTL----LTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622
Query: 400 TWSSLINACA 409
T+ SLI
Sbjct: 623 TYFSLIEGIG 632
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 189/455 (41%), Gaps = 66/455 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF + D ALR + ++ P +I +I + G G K I+ED+
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + ++ +L + M+K V ++ +YN +L AC G
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGG-- 166
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LD W+ L + M G+ P+ IT
Sbjct: 167 --------------------LD----------------WEGLLNLFAQMRHEGIQPDLIT 190
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++AC++ GLVEQA +F+ M ++G ++ L+ + Q R L R
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM- 249
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK--RFSFKPTTT 516
ED +GN+ I+ S+ N H ++ F + R P
Sbjct: 250 ---------ED-EGNSPDIAGY-----NSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVE 294
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ + +V++L ++M+ + P ++ LI G G + ++ + M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y+ + VC R ++A + + M + P+L L+ S YG +
Sbjct: 355 VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLI---SSYGKM 411
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ L Y + +AG + LI+ + +G
Sbjct: 412 AMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKG 446
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 11/226 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T++ + G G + + R+++ D++ + + +NSL+ V F ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M GV D A+Y+ LL C G T A +I+ + E+ L+ + ++
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEAS----AGLI 405
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL + AG+ P + +LI A GL +A M +AG +
Sbjct: 406 SSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
N +++A + D A F S+ Q G + D T
Sbjct: 466 APVSSVNSVMEAYSKVGLHDEALEFF-----SELQQKEGSEVDERT 506
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 181/421 (42%), Gaps = 59/421 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 453 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 512
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 513 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 568
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 569 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 628
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 629 DIGKAFEYF-------TKI----------------------------------------K 641
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 701
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 702 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 761
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQNQGEVTLC 684
+ +R +C +++M AG K ++ L+ + + + G +++C
Sbjct: 762 KGWARVSLPDRALKC---FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVC 818
Query: 685 R 685
R
Sbjct: 819 R 819
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 515 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 575 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 634
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 635 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 690
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 691 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 750
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 751 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 783
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 611 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 670
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 671 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGV-PPNIHTYTSYI 726
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 727 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 786
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 787 PDEASYHCLVTS 798
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 621 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 680
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 681 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 740
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 741 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 796
Query: 406 NA 407
+
Sbjct: 797 TS 798
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 60/349 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 288 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 346
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L R + E
Sbjct: 347 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE---------MEE 397
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 398 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 451
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 452 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 511
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 512 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 571
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TY 658
P ++TY L+ R H+VQ+ ++V M AG N+ TY
Sbjct: 572 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAGITPNEHTY 617
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TY+IL+ A D L E +T S N I ++ +I A SGN+E A +++
Sbjct: 333 TIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV 392
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M EDG+ + Y + + + + +FE +K +P++++Y LL + Y
Sbjct: 393 REMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL---NLY 449
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +V + L++ ++M G K N+ LI
Sbjct: 450 VKIGKVAKALSISKEMESCGIKHNNKTYSMLI 481
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 79/167 (47%), Gaps = 7/167 (4%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ G++ ++ + ++M + G A ++ + +IQ++N+
Sbjct: 381 QSGNMERAEELV---REMEEDGIDAPIDVYHSMMHGYT--IIQNENK 422
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 58/460 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ TII+ I G K+ ++L +Q + + + +L+N + + +K L +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K V ++ Y+ L+ C G + G + +G+L LD TY++++
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDG---FVSDALGLCSQIGERGIL-LDAVTYNSLID 238
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL------------------ 413
WQ ++ M+ V P+ T++ LI+A G
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 414 -----------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
V +A LF M++ G EP+ N+L+ + D A LF
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ +K V Y+ D + N I++ + H S+ P
Sbjct: 359 KELC-NKNLVPTIASYNSLIDGLCN-----SGRISHVKKLLDEMHGSAQ------PPDVV 406
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ A C + ++AL + M G+ PN +++ ++D NV A I M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD++ Y I +++ + +A LF+EM+H + P++ +Y +L+ G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
VQ+ L +M +G + L++ +C+ DK
Sbjct: 527 PHVQELL---DEMCDSGQSPDVITYNILLDAFCKTQPFDK 563
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 200/469 (42%), Gaps = 32/469 (6%)
Query: 210 AIRYACIVPRADI---LFCNFVREFGKK----RDLVSALRAYDASKKHLSSPNMYICRTI 262
IRYA +P+ I F +F + K R++ A+ ++ + P + +
Sbjct: 4 PIRYA--IPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKL 61
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G Y + +++ L+S+ ++ +I F L+N H F + + K G
Sbjct: 62 LGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGY 121
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++N ++ C+ G A + ++L A+G L D FTY T++ + +
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDF---CQNLLAQGYL-FDQFTYGTLINGLSKNGQIK 177
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL + ++M + V PN + +S+LI+ G V A+ L ++ + G ++ N L+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
C ++ +L +DY N + + K+ + +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNI--LIDALCKEGRILE------AQG 286
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ KR KP TYN LM+ C+ + + + L N M GL P+ +++ +LID
Sbjct: 287 VLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ V+ A+ + K + + P + +Y + I S R+ L +EM P++
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
VTY L+ A + G + E L V M K G K N +++ +C
Sbjct: 406 VTYNILIDALCKEGRILEA---LGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 182/456 (39%), Gaps = 66/456 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQK 317
++ID C G + + + + +NV + Y FN L++ + + LE V M K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI-LEAQGVLAMMSK 293
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G D+ +YN L++ C N A+E++ + K L+ DV Y+ ++ + K
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRM----VKRGLEPDVLNYNVLIDGYCKTK 349
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + +++ + + P +++SLI+ N+G + L +EM + P+ N
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 438 ILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
IL+ A C E R+ + + + G + ++ D + N N
Sbjct: 410 ILIDALCKEG-------RILEALGVLVMMMKKGV----KPNIVTYNAMMDGYCLRNNVN- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
V ++ K +P YN+L+ C +A L EMR L P+ S+ L
Sbjct: 458 VAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE------ 608
ID G + ++L M + G SPDV+ Y + +++ +A SLF +
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW 576
Query: 609 -------------------------MKH---YQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+KH + PN+ TY L+ A + GS E
Sbjct: 577 PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
L+ +D ND + E GV+ +N+
Sbjct: 637 LSKMED--------NDRPPDAITFEIIIGVLLQRNE 664
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L V M K GV ++ +YN ++ CL N +A++I+ + K L+ D+ Y+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM----VKSGLEPDILNYNV 480
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ + ++M + P+ +++SLI+ N G + L +EM +G
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG--EDYDGNTDRISNMEHKD 486
P+ NILL A + FD+A LFR Q+ G D+ N + N+ +
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFR-------QIVEGIWPDFYTNHAIVDNLCKGE 593
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
K + ++LM C SP
Sbjct: 594 KLKMAE----------------------DALKHLLMHGC-------------------SP 612
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++TILI+A G+ A+ +L M ++ PD + + I V ++ +A L
Sbjct: 613 NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLR 672
Query: 607 EEM 609
EEM
Sbjct: 673 EEM 675
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G C M AI ++++R +N+ +I +NSL++ N + E+ M G
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNILL A C A ++ ++ +G+ D +T IV + +MA
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQI----VEGIWP-DFYTNHAIVDNLCKGEKLKMA 598
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L G +PN T++ LINA G +AM L +M P++ I++
Sbjct: 599 EDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGV 658
Query: 443 CVEACQFDRAFRL 455
++ + D+A +L
Sbjct: 659 LLQRNETDKAEKL 671
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ ++ L+ A Y +L ++++ G+SP+ ++TILI+ + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L + + G P++V + T I + + +A + + + TY TL+ S+
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
G +++ L + Q+M K+ + N LI+ C +G + D
Sbjct: 173 NG---QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 64/387 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + NIY N L+N H L F V + KLG ++A++N
Sbjct: 84 YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 143
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L++ C+ G GEV HL K + + +V TY T++ A+++
Sbjct: 144 LIRGLCVEGKI-------GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + ++S+I++ V QA +LF EM+ G P+ N L+ A
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C++ L SK
Sbjct: 257 CEWKHVTALLNEMVNSKIM----------------------------------------- 275
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P ++ ++ A C + ++A +++ M G+ PN +++ L+D +
Sbjct: 276 ------PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ M G +PDVV+Y+T I + +R+++A LFEEM ++ PN VTY TL
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L Q +A++ +M G
Sbjct: 390 MHGLCHVGRL---QDAIALFHEMVTRG 413
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 180/414 (43%), Gaps = 39/414 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T+I G+C G + +++ + + N+ + +L+N +
Sbjct: 136 PNIATFNTLIR--GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAI 193
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ ++M++ D+ Y ++ + C A ++ E+ H +G+ +FTY+++
Sbjct: 194 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH---QGI-SPSIFTYNSL 249
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ + +M+++ + PN + +S++++A G V +A + + M++ G
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEH 484
EPN N L+ + D A ++F + + V+ +G RI +
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRT 541
++ R P T TY+ LM C R++ AL +EM T
Sbjct: 370 LFEEMC-----------------RKELIPNTVTYSTLMHGLC-HVGRLQDAIALFHEMVT 411
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ +S+ IL+D + ++ A+ +LK + M PD+ YT I R+ L+
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A LF + + PN+ TY ++ + G L E + ++ +M + GY N
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK---LFGEMKRKGYSPN 522
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 193/447 (43%), Gaps = 67/447 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D ++A ++ ++ Q ++ +I+ +NS
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 248
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M ++ ++ ++ A C G + A ++ V +
Sbjct: 249 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV---VDMMI 305
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G P+ +++S+LIN +
Sbjct: 306 KRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+AM+LFEEM + PN+ + L+ + A LF +++ Q+
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM-VTRGQI-------- 415
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P+FV +Y IL+ C +
Sbjct: 416 -------------------PDFV-------------------SYCILLDYLCKNRRLDEA 437
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A + + G+ P+V YT I
Sbjct: 438 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 497
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L +A LF EMK PN TY + R R +E + + + Q+M G+
Sbjct: 498 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN---NETLRGIQLLQEMLARGF 554
Query: 653 KAN---DTYLKELIEEWCEGVIQDKNQ 676
A+ T L E++ + +G+ Q Q
Sbjct: 555 SADVSTSTVLVEMLSD--DGLDQSVKQ 579
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 180/434 (41%), Gaps = 69/434 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ A+
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC-EWKHVTALLN 267
Query: 281 DLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ + + N+ +F+++++ + AHD V M K GV ++ +YN L+
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD------VVDMMIKRGVEPNVVTYNALMD 321
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL A +++ + KG DV +YST++ + + + A+ + E+M
Sbjct: 322 GHCLRSEMDEAVKVFDT---MVCKGFAP-DVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 377
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ PNT+T+S+L++ + G ++ A+ LF EM+ G P+ ILL + + D A
Sbjct: 378 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 437
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ++ +G SNM+
Sbjct: 438 IALLKA-------------IEG-----SNMD----------------------------- 450
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P Y I++ C + + L + + + GL PN ++TI+I+ G + A ++
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G SP+ Y + +R+ + L +EM ++ T L+ S
Sbjct: 511 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 570
Query: 631 YGSLHEVQQCLAVY 644
G V+Q L+ +
Sbjct: 571 DGLDQSVKQILSEF 584
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +P T+N L++ C + V L ++M G PN +++ LI+ G+
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++L+ M + PDVV YT+ I + +++ QAF+LF EM H I P++ TY +L+
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKN 675
A +L E + A+ +M + N +++ C EG + + +
Sbjct: 251 HALC---NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 298
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + N+ +I ++ +++ A +L+ +++ N+ G+ ++ +Y I++
Sbjct: 439 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A +++GE+K KG + TY+ I + F +++ ++ML+ G
Sbjct: 499 CQQGLLAEASKLFGEMKR---KGY-SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 554
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + T + L+ ++ GL + + E LQ
Sbjct: 555 SADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 170/415 (40%), Gaps = 64/415 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++++ ++ + + +++ N L+N H + F+ V + KLG + + N
Sbjct: 26 YPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNT 85
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K CL G + + +V A+G ++D +Y+T++ + ALK+ +
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKV---VAQG-FQMDQVSYATLLNGLCKIGETRSALKLLRMI 141
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
PN + ++++I+ LV +A L+ EM G PN + L+ A Q
Sbjct: 142 EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQL 201
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
AF L L
Sbjct: 202 MEAFGLLNEMILK----------------------------------------------- 214
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P TY ILM A C + K L+ M G+ PN +S+ L+D G V+ A
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA 274
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Q+ M + G++P+V +Y I +SKR+ +A +L E+ H + PN VTY +L+
Sbjct: 275 KQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDG 334
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
+ G + L + ++M+ G A+ L++ C KNQN + T
Sbjct: 335 FCKLG---RITSALDLLKEMYHRGQPADVVTYTSLLDALC------KNQNLDKAT 380
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 163/392 (41%), Gaps = 53/392 (13%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SAL+ + + PN+ + TIID G+C D L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIID--GLCKD------------------------KLV 166
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
N A+DL Y M G+ ++ +Y+ L+ CLAG + E +G + + K +
Sbjct: 167 N-EAYDL------YSEMDARGIFPNVITYSTLIYGFCLAGQLM---EAFGLLNEMILKNI 216
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V+TY+ ++ + A + M GV PN +++++L++ G V+ A
Sbjct: 217 -NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F M+Q G PN NI++ ++ + D A L R L K V Y D
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE-VLHKNMVPNTVTYSSLIDG 334
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILMKACCTDYY--RVKAL 535
+ IT+ + + ++ +P TY L+ A C + + AL
Sbjct: 335 FCKLGR-----ITSALDLLKEMYHRG-------QPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M+ G+ PN ++T LID G + A ++ + + G +V Y I +
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L +A ++ +M+ P+ VT+ ++R+
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 22/293 (7%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
ML TP + ++ ++ + A+ LF++M G EP+ NIL+
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINC------ 54
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
F ++ S+T+ + LG Y NT ++ + + + + H+
Sbjct: 55 FCHLGQMTFSFTVLGKILKLG--YQPNTITLNTL----MKGLCLKGEVKKSLHFHDKVVA 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL----MNEMRTVGLSPNHISWTILIDACGGSGNV 564
F+ +Y L+ C AL M E R+ PN + + +ID V
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRST--RPNVVMYNTIIDGLCKDKLV 166
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A + M G+ P+V+ Y+T I + +L +AF L EM I PN+ TY L
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTIL 226
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ A + G + E + LAV M K G K N L++ +C G +Q+ Q
Sbjct: 227 MDALCKEGKVKEAKNLLAV---MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQ 276
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+PN+Y +ID ++ + ++ +N+ N ++SL++ + T L+
Sbjct: 287 NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALD 346
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M G AD+ +Y LL A C N A ++ ++K +G+ + + +TY+ ++
Sbjct: 347 LLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE---RGI-QPNKYTYTALI 402
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A K+ + +L G N T++ +I+ G++++A+ + +M + GC
Sbjct: 403 DGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCI 462
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
P++ I++++ E Q D+A +L
Sbjct: 463 PDAVTFEIIIRSLFEKDQNDKAEKLLH 489
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 42/421 (9%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF----------TLEVYKNMQKL 318
M+S+ + DL + ++ +N Y M +V A LK L + ++ L
Sbjct: 93 MESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLAL 152
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y IL+ C G T A ++ ++ +E K ++ +V YSTI+ K
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQV---LRQIEGK-LVNTNVVMYSTIIDGLCKDKL 208
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +M+ + P +T+SSLI G + A LF EM+ P++ NI
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268
Query: 439 LLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ A + + A + + T V DG + N K K
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC--LVNEVGKAK-------- 318
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
H S R P + +YNI++ C +A L +EM G++P+ +++
Sbjct: 319 -----HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID +G + A +++ M + + D+V Y + I V +++ + +A +L +++K +
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
IQPN+ TY L+ + G L Q V+QD+ GY N +I C EG+
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQD---VFQDLLIKGYNVNAWTYNIMINGLCKEGLFD 490
Query: 673 D 673
+
Sbjct: 491 E 491
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 164/393 (41%), Gaps = 27/393 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYE 280
+ N + + G+ R + LR + L + N+ + TIID G+C D + + A +Y
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIEGK---LVNTNVVMYSTIID--GLCKDKLVTDAYGLYS 217
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + + F+SL+ KF ++ M + D ++NIL+ A C G
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ + + + +GV + V TY+T++ + A V + V PN+
Sbjct: 278 KIKEAKNV---IAVMMKEGV-EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNS 333
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++ +IN +V++A+ LF EM G P+ N L+ +A + A+ L
Sbjct: 334 RSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDE 393
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + Y+ D +H DK +I K +P TY
Sbjct: 394 MHNNCIPADI-VTYNSLIDVFCKNQHVDK-AIALVKKI----------KEHGIQPNMCTY 441
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ C + + ++ G + N ++ I+I+ G + A +L M +
Sbjct: 442 NILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMED 501
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+G+ PD V Y T I+ ++A L EM
Sbjct: 502 NGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 109/276 (39%), Gaps = 47/276 (17%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P + F + + F GK +D A R ++ +P+ Y ++D G
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKD---AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN----VN-----AHDLKF----------------- 307
+++ + + + V + +N+LM+ VN H L
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340
Query: 308 -----------TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
L ++ M G+ +YN L+ C AG A E+ E+ +
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN---- 396
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ D+ TY++++ VF + A+ + + + G+ PN T++ LI+ G ++
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A +F+++L G N+ NI++ + FD A
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
+C V E GK + ++S + + +PN +I+ G C M A+ + +
Sbjct: 308 YC-LVNEVGKAKHVLSII------SRMRVAPNSRSYNIMIN--GFCKIKMVDEALCLFHE 358
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + + +NSL++ A + + E+ M + AD+ +YN L+ C +
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + VK ++ G+ + ++ TY+ ++ + A V +D+L G N
Sbjct: 419 VDKAIAL---VKKIKEHGI-QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW 474
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +IN GL ++A L +M G P++ ++QA + ++A +L R
Sbjct: 475 TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Query: 460 TL 461
+
Sbjct: 535 VI 536
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 185/434 (42%), Gaps = 62/434 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
K L A + KK + PN + +I+ G C + RA + ++++ + N
Sbjct: 19 KANRLPEATTYFAKMKKKGTVPNEWTYNVLIN--GFCKVHKVHRAYLLLKEMKESGLAPN 76
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++++++ K ++++ M + G M ++ +YN LL C G L E Y
Sbjct: 77 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG---LMDEAYE 133
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L+ D F+Y T++ MALKV ED + P+ + +S+LI
Sbjct: 134 LLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G +++A LFE+M + CEP+ L+ C+ DR L + Q L
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG---LCKGDR---------LQEAQQVL 240
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-----------DKRFSFK----- 512
ME ++ TPN + YSS D + FK
Sbjct: 241 -----------ETMEDRN-----CTPNVI---TYSSLIDGLCKTGQVRDAQEVFKRMIVR 281
Query: 513 ---PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TYN L+ C AL M EM G P+ I++ LID +G A
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M+ +PDV+ Y+ I + +R+ A +LF++M + P++VT+ TL+
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 628 RSRYGSLHEVQQCL 641
G + + ++ L
Sbjct: 402 YCNAGLVDDAERLL 415
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 166/396 (41%), Gaps = 60/396 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ ++ID G+C G ++ +++ + + + N+ +NSL++ + +
Sbjct: 249 TPNVITYSSLID--GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M G + D+ +YN L+ C G A ++G++K AK DV TYS
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AK-FCNPDVITYSC 362
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + MA + +DML V P+ +T+S+L+ NAGLV+ A L EEM+ +
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + A R+ + Q
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ----------------------- 459
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TY L+ A C A L+ EM G+ P
Sbjct: 460 ------------------------PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 547 NHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N I++ LI G+G++E A ++L ++ R++ D+ AY + R+ R+ A L
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E +K P Y+ L+R + L + + L
Sbjct: 556 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 591
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 194/454 (42%), Gaps = 31/454 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IY 279
+ + + F ++ + +A + + ++ PN+ T++ G+C + + A +
Sbjct: 78 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS--GLCRNGLMDEAYELL 135
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++R + + + + +++LM + L+V+++ D+ +Y+ L+ C
Sbjct: 136 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKT 195
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A +++ +++ + + DV T++ ++ Q A +V E M TPN
Sbjct: 196 GRLDEACKLFEKMR----ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+SSLI+ G V A +F+ M+ G EPN N L+ D A L
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-KPTTT 516
T + D I+ D T P ++ D + F P
Sbjct: 312 EMTATGCL----------PDIITYNTLIDGLCKTGR---APEANRLFGDMKAKFCNPDVI 358
Query: 517 TYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+ L+ C R+ + L ++M + P+ ++++ L++ +G V+ A ++L+
Sbjct: 359 TYSCLIGGFCK-LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M SPDV YT+ + + R+ +A + + M QPN+VTY L+ A R G
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ L ++M G + N + LI +C
Sbjct: 478 PTVAYKLL---EEMVGNGVQPNVITYRSLIGGFC 508
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 53/289 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T++ ++ A A M G PN T++ LIN V +A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM ++G PN + ++ + D A++LFR
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR------------------------ 101
Query: 482 MEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
Q + N PN V TYN L+ C + +A L++
Sbjct: 102 ------QMVENGCMPNLV-------------------TYNTLLSGLCRNGLMDEAYELLD 136
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EMR GL P+ S+ L+ +G ++ AL++ + PDVVAY+T I ++
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
RL +A LFE+M+ +P++VT+ L+ + L E QQ L +D
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 209/497 (42%), Gaps = 48/497 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL+ ++ + P++ T+I G+C G ++ ++E +R + ++ F +L
Sbjct: 166 ALKVFEDNSNGDCPPDVVAYSTLI--AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTAL 223
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
M+ L+ +V + M+ ++ +Y+ L+ C G AQE++ K +
Sbjct: 224 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF---KRMIV 280
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G+ + +V TY++++ F AL + E+M + G P+ IT+++LI+ G
Sbjct: 281 RGI-EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALG 469
+A LF +M C P+ + L+ + + D A LF T L
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
E Y N + + E ++ + + P TY L+ C
Sbjct: 400 EGY-CNAGLVDDAERLLEEMVAS-----------------DCSPDVYTYTSLVDGFCKVG 441
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V+A ++ M G PN +++T LIDA +G A ++L+ M +G+ P+V+ Y
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ I + L++A + E ++ + + ++ Y ++ R G + L + +
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA---LELLEA 558
Query: 647 MWKAGYKANDTYLKELIEEWCEGVIQDKNQN-QGEVTLCRRTNSQRPQSLLLEKVAVHLQ 705
+ ++G LI C+G K E+TL R++ RP + E V L
Sbjct: 559 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS---RPNAEAYEAVIQELA 615
Query: 706 KSA----AENLAIDLRG 718
+ A LA +L G
Sbjct: 616 REGRHEEANALADELLG 632
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 38/157 (24%)
Query: 547 NHISWTILIDA-CGGS----------------------------------GNVEGALQIL 571
N I+WTI+ID C + V A +L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M+E G++P+VV Y+T I R ++ A+ LF +M PNLVTY TLL R
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + E + L +M + G + + L+ C+
Sbjct: 126 GLMDEAYELL---DEMRERGLQPDKFSYDTLMAGLCK 159
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 14/209 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + V F K +V A R K PN+ +ID G + + E++
Sbjct: 430 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV 489
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLA 337
V N+ + SL+ DL+ E K +++L ADM +Y +++ C
Sbjct: 490 GNGVQPNVITYRSLIGGFCGTGDLE---EARKMLERLERDENCKADMFAYRVMMDGLCRT 546
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTP 396
G A E+ +K ++ + D+ Y +++ K A++V E+M LS P
Sbjct: 547 GRMSAALELLEAIK--QSGTPPRHDI--YVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML 425
N + ++I A G E+A L +E+L
Sbjct: 603 NAEAYEAVIQELAREGRHEEANALADELL 631
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 180/429 (41%), Gaps = 62/429 (14%)
Query: 210 AIRYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDA-SKKHLS-SPNMYICRTIIDVC 266
A+ C R D++ + V K + ALR D S++ L P++ T++D
Sbjct: 160 ALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD-- 217
Query: 267 GIC--GDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
G+C G ++ A E S N +N L++ ++ E+ + M+ GV
Sbjct: 218 GLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV 277
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ + N ++ C AG T A E + E + + +G K + TYST+V
Sbjct: 278 PQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNNVG 335
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA+++ + +S G +P+ I + ++I+ AG +E A + M +AG + +++ NIL+
Sbjct: 336 MAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
F R RL ++ L +
Sbjct: 396 AG------FCRKKRLHEAYELLQEM----------------------------------- 414
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
K +P TYN L+ C D+ V L+ +M G P+ I++ L+
Sbjct: 415 ------KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ AL+IL+ M E G+ P+ V Y T I + + A LF+EMK + N+
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528
Query: 619 VTYITLLRA 627
T+ LL+
Sbjct: 529 TTFNALLKG 537
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 175/434 (40%), Gaps = 42/434 (9%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEI 346
+++ FNS++ A D+ +Y MQ V D+ +Y IL+ C AG A +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA--GVTPNTITWSSL 404
+ + ++ DV T +T+V + Q AL E +S+ G PNT+T++ L
Sbjct: 195 LDGMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----WT 460
I+A G + A L E+M G N N ++ A + A FR W
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312
Query: 461 LSKTQVALGEDYDGNTDRISN----ME-HKDKQSITNTPNFV----------------PN 499
K G +N ME +K S ++P+ +
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S K FK T YNIL+ C + L+ EM+ VG+ P+ ++ L+
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+ ++L M +DG P V+ + T + + ++ +A + M I PN
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
V Y TL+ + G +V + ++ +M + AN T L++ ++DKN
Sbjct: 493 NVIYNTLIDFLCKRG---DVDLAIELFDEMKEKSVPANVTTFNALLKG-----LRDKNMP 544
Query: 678 QGEVTLCRRTNSQR 691
+ L + +R
Sbjct: 545 EKAFELMDQMREER 558
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 172/411 (41%), Gaps = 62/411 (15%)
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ L I FN+L+N KF +E++ +M G D+ +Y ++ C G TV A
Sbjct: 188 LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAA 247
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ + + DV TYSTI+ + AL + M + G++PN T++SL
Sbjct: 248 GLFRKM----GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I N +A + EM+ PN ++L+ F + +F + + KT
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI------FCKEGNVFEARGVLKT 357
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF------------- 511
+G + PN V YSS +S
Sbjct: 358 MTEMGVE----------------------PNVVT---YSSLMNGYSLQAEVVEARKLFDV 392
Query: 512 ------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
KP +YNIL+ C K L NEM GL+P+ +S+ LID G
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + K M +G PD+ Y+ + + L +AF LF M+ ++PN+V Y
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
L+ A + +L E ++ ++ +++ G + N +I C EG++ +
Sbjct: 513 LIDAMCKSRNLKEARK---LFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 65/387 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K R + AL + K SPN++ ++I G+C + ++ A+ ++ S N+ N
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ--GLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 291 IYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
I F+ L+N+ N + + V K M ++GV ++ +Y+ L+ L V A++
Sbjct: 332 IVTFSLLINIFCKEGNVFEAR---GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + KG K DVF+Y+ ++ + AK A ++ +M+ G+TP+ +++++LI
Sbjct: 389 LF---DVMITKGC-KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ G + +A LF+ ML G P+ +ILL + +AFRLFR+
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM------ 498
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
S Y KP YNIL+ A
Sbjct: 499 ---------------------------------QSTY--------LKPNMVMYNILIDAM 517
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + L +E+ GL PN +T +I+ G ++ AL+ + M EDG P+
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+Y I+ ++ K +A L EM+
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMR 604
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 178/411 (43%), Gaps = 40/411 (9%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
V +FG+ A+ +D P+++ TII+ G+C G+ + + ++ +
Sbjct: 205 VGKFGQ------AVELFDDMVARGYQPDVHTYTTIIN--GLCKIGETVAAAGLFRKMGEA 256
Query: 286 NVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ ++++++ D + L+++ M+ G+ ++ +YN L++ C A
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E+ L + ++ T+S ++ +F A V + M GV PN +T+SS
Sbjct: 317 SAMLNEMMSLN----IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
L+N + V +A LF+ M+ GC+P+ NIL+ +A + A +LF
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 461 LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L+ V+ DG R+ K +TN P TY
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN-----------------LPDLCTY 475
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+IL+ C Y KA L M++ L PN + + ILIDA S N++ A ++ +
Sbjct: 476 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G+ P+V YTT I + L +A F M+ PN +Y ++R
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 175/389 (44%), Gaps = 36/389 (9%)
Query: 291 IYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
I FN L++ + HD +L K M+ G+ D + ++L+ L
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLS--KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++ L L+L + T++T++ + A+++ +DM++ G P+ T++++I
Sbjct: 179 VLAKIIKLG----LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTII 234
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
N G A LF +M +AGC+P+ + ++ + + + + A +F S+ +K
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF-SYMKAKGI 293
Query: 466 VALGEDYDGNTDRISNMEH-KDKQSITN---TPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
Y+ + N ++ ++ N + N +PN T+++L
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN---------------IVTFSLL 338
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + + ++ M +G+ PN ++++ L++ V A ++ +M G
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV +Y I ++KR+ +A LF EM H + P++V+Y TL+ + G L E
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++++M G + L++ +C+
Sbjct: 459 ---LFKNMLTNGNLPDLCTYSILLDGFCK 484
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + + + + ++V A + +D P+++ +I+ G C +++ ++
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILIN--GYCKAKRIGEAKQLF 425
Query: 280 EDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ Q +T +I +N+L++ AHDL +KNM G + D+ +Y+ILL
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL------FKNMLTNGNLPDLCTYSILL 479
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A ++ ++ LK ++ Y+ ++ ++ + A K+ ++
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQ----STYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN ++++IN GL+++A+ F M + GC PN N++++ ++ R
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESR 595
Query: 452 AFRL 455
A +L
Sbjct: 596 AVQL 599
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 135/337 (40%), Gaps = 70/337 (20%)
Query: 110 MLSLEMVASGIVKSI------REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLL 158
M+SL ++ + + S+ +EG + GVLK + E+GV P L +G +
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 159 KNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV---NLAIRYAC 215
E ++L D I + C KPDV N+ I C
Sbjct: 383 VVEARKLFD---------------------------VMITKGC--KPDVFSYNILINGYC 413
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
K + + A + ++ +P++ T+ID G+C G
Sbjct: 414 -----------------KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID--GLCQLGRLR 454
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++++ + ++ ++ L++ L +++ MQ + +M YNIL+
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C + N A++++ E L +G L+ +V Y+TI+ AL+ +M
Sbjct: 515 DAMCKSRNLKEARKLFSE---LFVQG-LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
G PN +++ +I +A+ L EM + G
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 183/445 (41%), Gaps = 55/445 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R ++ + + G GN D
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 420 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---------------ITLLRARSRYGSLHEVQQCLAVY 644
K+A L ++ H P+ + Y + LL+ G + E + VY
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK---VY 576
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
Q M +K + + LI C G
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRG 601
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 168/366 (45%), Gaps = 37/366 (10%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M + GV ++ +YNIL++A C G +E G V + G + TY+T+V F
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRL---EEAVGVVGDMRGAGCAP-NAVTYNTLVAAF 197
Query: 374 ADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A A +V M G PN +T++S++N AG +E A +F+EM++ G P+
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----IS 480
N LL + + +F T ++ T + GN ++ ++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 481 NMEHKDKQ--SITNTP--------NFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT-- 527
M + + +T T F+ ++ + + ++ +P+ YN L+ C
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D R L+ EM + P+ ++++ +I GN++ A Q+ + M + G+ PD +
Sbjct: 378 RMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y++ I+ KRL A LFE M +QP+ TY TL+ + G+ V++ L+++
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN---VEKALSLHD 492
Query: 646 DMWKAG 651
+M + G
Sbjct: 493 EMIRKG 498
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + ML GV PN T++ L+ A G +E+A+ +
Sbjct: 118 VPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN+ N L+ A A + D A R L R +K + +
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKAL 535
ME K FD+ R P +YN L+ C + A+
Sbjct: 237 GRMEGARK----------------VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM GL P+ +++T LI A +GN+E A+ ++ MRE G+ + V +T I +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
L A EEM+ IQP++V Y L+ + G +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 18/310 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V+TY+ +V+ + A+ V DM AG PN +T+++L+ A AG ++ A +
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 422 EEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M + G +PN N ++ +A + + A ++F + L D +S
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM----VREGLAPDVVSYNTLLS 266
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
K + V +S +R P T+ L+ A C + + AL+ +
Sbjct: 267 GY---CKVGCLHESLAV----FSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR GL N +++T LID G ++ AL ++ MR+ G+ P VV Y I + R
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ A L EM+ +++P++VTY T++ + G+L Q + Q M K G +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ---LNQKMLKKGVLPDAIT 435
Query: 659 LKELIEEWCE 668
LI CE
Sbjct: 436 YSSLIRGLCE 445
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 507
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 588 TAIK 591
+ ++
Sbjct: 628 SLVR 631
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 42/205 (20%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R P TYNIL++A C +A+ + +MR G +PN +++ L+ A +G ++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 566 GALQILKIMREDG------------------------------------MSPDVVAYTTA 589
GA +++ +MRE+G ++PDVV+Y T
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + L ++ ++F EM + P++VT+ +L+ A + G+L +Q +A+ M +
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL---EQAVALVAQMRE 321
Query: 650 AGYKANDTYLKELIEEWC-EGVIQD 673
G + N+ LI+ +C +G + D
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDD 346
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 411 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 459
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 460 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 578 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 634 FEEGMVVEADNAIQDLL 650
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G +P+ ++ ++ A ++ A + L M G++P+V Y ++ RL++A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ +M+ PN VTY TL+ A R G L ++ +++ ++ A K N +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSM 229
Query: 663 IEEWCE 668
+ C+
Sbjct: 230 VNGLCK 235
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 40/277 (14%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ KG +L+V Y+ ++++ A+ W + ++M+S G+TP T+ +LI+ + G
Sbjct: 186 LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGG 245
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L E+A+H + M + G EP+ +++Q +A +F +A + F++W+L
Sbjct: 246 LTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESAS------- 298
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
Q ++ N+ ++ K + + T+ +++
Sbjct: 299 ---------------QPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-------- 335
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G+ PN +++ +I CG G +E A +++ M E PD Y I +
Sbjct: 336 ----------GIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 385
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +A S F++MK +++P+LV+Y TLL A S
Sbjct: 386 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFS 422
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 169/406 (41%), Gaps = 27/406 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-----EDLRSQNVTLNIYVF 294
AL D K P+ ++ G++ K+ + E +V L+ Y +
Sbjct: 250 ALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTY 309
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L++ A L+ + + M + G++ + ++N ++ C G A + +++
Sbjct: 310 NTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEE 369
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L D TY+ ++ + A A + M A + P+ +++ +L+ A +
Sbjct: 370 LRCPP----DTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRH 425
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
LV +A L EM + G E + + L + +EA +++ FR + L + E Y
Sbjct: 426 LVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSS--ECY 483
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYY 530
N D H + + + + S K + +N+++KA Y
Sbjct: 484 SANIDAYGERGH------------ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYE 531
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L++ M G+ P+ S+ LI + A L M+E + D + Y I
Sbjct: 532 KACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVI 591
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ +L+ A LF+EM Y +QP++V Y L+ A + G++ E
Sbjct: 592 SSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVRE 637
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 181/447 (40%), Gaps = 47/447 (10%)
Query: 230 EFGKKRDLVSALRAYDASKKH--LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
EF K AS+ H LSS Y T+ID G G ++ + + + +
Sbjct: 281 EFKKAEQFFKNWSLESASQPHVCLSS---YTYNTLIDTYGKAGQLREASDTFAWMLREGI 337
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N FN+++++ N L+ + + M++L D +YNIL+ N A
Sbjct: 338 IPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAAS 397
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++K EA+ L+ D+ +Y T++ F+ A + +M G+ + T S+L
Sbjct: 398 YFKKMK--EAR--LEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALT 453
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------RSW 459
AG+++++ F G +S+C + + A E A + F R
Sbjct: 454 RMYIEAGMLKKSWLWFRRFHLEG-NMSSECYSANIDAYGERGHILEAEKAFLCCKESRKL 512
Query: 460 TLSKTQV-----ALGEDYDGNTDRISNMEHK----DKQSITNTPNFVPNSHYSSFDKRFS 510
++ + V + Y+ I +ME+ DK S + + ++ K +
Sbjct: 513 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 572
Query: 511 FKPTTTTYNILMKACCTDYYRV-------------KALMNEMRTVGLSPNHISWTILIDA 557
K T + + C Y V + L EM + P+ + + ILI+A
Sbjct: 573 MKMQETQ----LVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINA 628
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GNV A+ + +R G+ + V Y + IK+ + L++A ++ ++ ++ P+
Sbjct: 629 FADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPD 688
Query: 618 LVT---YITLLRARSRYGSLHEVQQCL 641
+ + I L RS E+ + L
Sbjct: 689 VYSSNCMIDLYSERSMVKQAEEIFESL 715
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 62/317 (19%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+ GV+ D SYN L++ LA + + + +K E + L D Y ++ F
Sbjct: 539 SMENHGVLPDKFSYNSLIQ--ILASADLPHKAKFYLMKMQETQ--LVSDCIPYCAVISSF 594
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+MA + ++M+ V P+ + + LINA A+ G V +A++ + AG N+
Sbjct: 595 IKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNA 654
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N L++ + + A ++ L ++V
Sbjct: 655 VIYNSLIKLYTKVGYLEEAQEAYK--MLQASEVG-------------------------- 686
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS------PN 547
P+ + S+ C D Y ++++ + + S N
Sbjct: 687 ----PDVYSSN--------------------CMIDLYSERSMVKQAEEIFESLKRKGDAN 722
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ +++ G ++ A QI++ MRE G+ D+++Y + R K A F+
Sbjct: 723 EFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFK 782
Query: 608 EMKHYQIQPNLVTYITL 624
EM IQP+ T+ +L
Sbjct: 783 EMIEAAIQPDDCTFKSL 799
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 42/172 (24%)
Query: 507 KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K+ ++ YNI+++ ++ V++L +EM + G++P + ++ LID G
Sbjct: 188 KKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLT 247
Query: 565 EGALQILKIMREDGMSPDVVA--------------------------------------- 585
E AL L M + GM PD V
Sbjct: 248 EEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSY 307
Query: 586 -YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
Y T I ++ +L++A F M I PN VT+ T++ +G L E
Sbjct: 308 TYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 359
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 201/471 (42%), Gaps = 43/471 (9%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 109 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 168
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVV 228
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 284
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M G TP+ ++++I+ G ++ A + M G +PN C N LL+
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNT-PNF 496
A +++ L + L + D+ +G DR+ +E ++ + P+
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV--IELLEQMLVHGCMPDV 402
Query: 497 VPNSHYSSFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--L 535
+ Y++ F KP T +Y I++K C+ V A L
Sbjct: 403 I---TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M++M G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I +
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + +A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 520 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 570
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 176/428 (41%), Gaps = 59/428 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ LK E+
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 375
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 376 FFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ I+L+ C +R W D M +Q
Sbjct: 436 NTISYTIVLKG---LCSAER-------WV----------------DAEDLMSQMIQQGCP 469
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
P T+N L+ C +A L+ +M G SP+ I
Sbjct: 470 LNP---------------------ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S++ +ID G +G + AL++L +M GMSP+ + Y++ R R+ + +F+ +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-E 668
+ I+ + V Y ++ + + G E ++ + M +G N++ LI E
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRG---ETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625
Query: 669 GVIQDKNQ 676
G +++ +
Sbjct: 626 GFVKEAQE 633
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 22/312 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 200
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 201 ----AICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + LK A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ M Y ++PN+V Y TLL+ E ++ LA +M+ +D L
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA---EMFDKDCPLDDVTFNIL 373
Query: 663 IEEWCEGVIQDK 674
++ +C+ + D+
Sbjct: 374 VDFFCQNGLVDR 385
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 330 PNVVCYNTLLK--GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + A G K + +Y+ +
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMTACGC-KPNTISYTIV 443
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W A + M+ G N IT+++LIN GLVEQA+ L ++ML GC
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + D A L T+ + +A +G +++
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M + + + + N+ SS KR + R + M +
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKR------------------GETERAIEFLAYMVS 605
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++TILI G V+ A ++L
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEML 635
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 192/445 (43%), Gaps = 39/445 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+++ +ID GD SR ++ +R ++ ++ +NSL++ L+
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ +G + D+ +YN L+ C A E + E+K+ LK +V TYST++
Sbjct: 287 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN----NGLKPNVVTYSTLI 342
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F Q A+K+ DM G+ PN T++SLI+A AG + +A L +MLQAG +
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQ---VALGEDYDGNTDRISNMEH 484
N LL +A + A +FRS +S Q AL Y +R+ +
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMK 461
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQ + KP Y ++ C+ K ++ EM++
Sbjct: 462 ILKQM-----------------TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 504
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+S N + T +IDA +G AL + M++ G+ +V Y I + ++ A
Sbjct: 505 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELA 564
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F M +QPN+ Y +L+ + ++ ++ +M G + T L
Sbjct: 565 VDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK---LFDEMQCRGMTPDITAFTAL 621
Query: 663 IEEWCEGVIQDKNQNQGEVTLCRRT 687
I +G ++ N + V + R T
Sbjct: 622 I----DGNLKHGNLQEALVLISRMT 642
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 195/440 (44%), Gaps = 43/440 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL ++ R + ++ SP++ ++ID G G + +++ +++ +I
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N + E + M+ G+ ++ +Y+ L+ A C G + Q +
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG---MMQGAIKLL 358
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G+L + FTY++++ A A K+ DML AGV N +T+++L++
Sbjct: 359 XDMRRTGLLP-NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVA 467
AG + +A +F ML+ G PN Q L+ ++A + + A ++ + T + +
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477
Query: 468 LGEDYDGNTDRIS------NMEHKDKQSITNTP---NFVPNSHYSSFD-----------K 507
G G+ + +E + I+ P + ++++ + +
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 508 RFSFKPTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ T TY +L+ C DY+ M ++GL PN +T LID
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYF------CRMLSLGLQPNVAVYTSLIDGLC 591
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ +E A ++ M+ GM+PD+ A+T I ++ L++A L M I+ +L
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651
Query: 620 TYITLLRARSRYGSLHEVQQ 639
Y +L+ S+ G LH+ ++
Sbjct: 652 VYTSLVSGFSQCGELHQARK 671
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 52/289 (17%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q+ K DM+ AG+ P+ T++ +I+ G +E + LF +M + G P+ N L
Sbjct: 212 QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 271
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + + LF E KD +
Sbjct: 272 IDGYGKVGSLEEVASLFN-------------------------EMKDVGCV--------- 297
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
P TYN L+ C +A +EM+ GL PN ++++ LIDA
Sbjct: 298 -------------PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G ++GA+++L MR G+ P+ YT+ I ++ L +A+ L +M ++ N
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 404
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+VTY LL + G + E ++ V++ M K G N L+ +
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEE---VFRSMLKDGISPNQQVYTALVHGY 450
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 164/419 (39%), Gaps = 55/419 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K+ + A++ ++ PN + ++ID G+ ++ + D
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V LNI + +L++ A + EV+++M K G+ + Y L+ A
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +I ++ +K D+ Y +I+ + + + E+M S G++ N +
Sbjct: 456 MEDAMKILKQMTECN----IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 511
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++I+A AG A++ F+EM G E +L+ EA + A F
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYF--- 568
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++LG +P Y
Sbjct: 569 ---CRMLSLG-----------------------------------------LQPNVAVYT 584
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + K L +EM+ G++P+ ++T LID GN++ AL ++ M E
Sbjct: 585 SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 644
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ D+ YT+ + + L QA F EM I P V I LLR + G L E
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I E+++S+ ++ N + ++++ A L ++ MQ +GV A + +Y +L+
Sbjct: 493 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 552
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG LA + + + L L+ +V Y++++ + A K+ ++M
Sbjct: 553 DGLCEAGIVELAVDYFCRMLSLG----LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608
Query: 392 AGVTPNTI-----------------------------------TWSSLINACANAGLVEQ 416
G+TP+ ++SL++ + G + Q
Sbjct: 609 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 668
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
A F EM++ G P C LL+ + Q D A L
Sbjct: 669 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 184/413 (44%), Gaps = 45/413 (10%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T+++ + G+ K +++ L+ ++ + L+N+ K + LEV K M
Sbjct: 415 IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMM 474
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I+K F
Sbjct: 475 ESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV----IKDGLKPDVVLYNNIIKAFCG 530
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 531 MGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 590
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE Q ++A + L+ +S EH T
Sbjct: 591 FNALVLGLVEKRQMEKAVEILDEMALAG---------------VSPDEH--------TYT 627
Query: 496 FVPNSHYSSFDKRFSFKPTTT-----------TYNILMKACCTDYYRVKAL--MNEMRTV 542
+ N + + D +F+ T TY L+KACC AL EM
Sbjct: 628 TIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQ 687
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ N + ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A
Sbjct: 688 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRA 747
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+EM+ ++PN+ TY TL+ + SL E + L +++M AG K +
Sbjct: 748 TKTIQEMEALGVKPNVKTYTTLIHGWA-CASLPE--KALRCFEEMKLAGLKPD 797
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 184/417 (44%), Gaps = 36/417 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R + + + +V+ SL++ A D++ L + M++ GV + +Y
Sbjct: 316 GDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTY 375
Query: 328 NILLKACCLAGNTVLA---QEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMAL 383
+I++ GN + V+ +E +G+ +D+ Y T++ + + L
Sbjct: 376 SIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDI--YHTMMNGYTMIGNEEKCL 433
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
V + + G P+ I++ LIN G V +A+ + + M AG + N + ++L+
Sbjct: 434 IVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGF 493
Query: 444 VEACQFDRAFRLFRSWTLS--KTQVALGEDYD------GNTDRISNM--EHKDKQSITNT 493
++ + AF +F K V L + GN DR +M E + K+ +
Sbjct: 494 LKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTS 553
Query: 494 PNFVPNSHYSS-----------FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
F+P H + FD +R PT T+N L+ KA +++E
Sbjct: 554 RTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDE 613
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+SP+ ++T +++ G+ A + +R +G+ DV Y +K C +S R
Sbjct: 614 MALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 673
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ A ++ EM I N Y L+ +R G + E + Q M + G + +
Sbjct: 674 MQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLM---QQMKQEGVQPD 727
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 131 CVVGVLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLE 182
C++ V K+L E G AP + ++ G E ++++S ++ + +L
Sbjct: 432 CLI-VFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLI 490
Query: 183 EFRLPVKELDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
L +K+ F + + + KPDV +L+ N ++ F ++
Sbjct: 491 NGFLKLKDWTNAFTVFEDVIKDGLKPDV--------------VLYNNIIKAFCGMGNMDR 536
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ +K P II G+ ++ I++ +R ++ FN+L+
Sbjct: 537 AIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVL 596
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V ++ +E+ M GV D +Y ++ G+T A E + ++++ +G
Sbjct: 597 GLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRN---EG 653
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+LDVFTY ++K + Q AL V +M + + NT ++ LI+ A G V +A
Sbjct: 654 -LELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEA 712
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
L ++M Q G +P+ + AC +A RA
Sbjct: 713 ADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRA 747
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SP+ + TI++ GD K+ + LR++ + L+++
Sbjct: 600 EKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVF 659
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V + M + + YNIL+ G+ A ++ ++
Sbjct: 660 TYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 719
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +GV + D+ TY++ + A A K ++M + GV PN T+++LI+ A
Sbjct: 720 KQ---EGV-QPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWAC 775
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ FEEM AG +P+ + L+ + + A+
Sbjct: 776 ASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAY 818
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
++ A G + +A FE M G P+S L+ A + A R
Sbjct: 308 MVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 367
Query: 464 TQVAL--------GEDYDGNTDRISNMEHKD------KQSITNTPNFVPNSHYSSFD--- 506
+++L G GN D+ NM+ + ++ + P + ++ + +
Sbjct: 368 VEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIG 427
Query: 507 ------------KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
K F P+ +Y L+ KAL M + G+ N +++
Sbjct: 428 NEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYS 487
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+LI+ + A + + + +DG+ PDVV Y IK + +A + +EM+
Sbjct: 488 MLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKK 547
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +P T++ ++ +R G E+++ L ++ M ++G
Sbjct: 548 RHRPTSRTFMPIIHGFARAG---EMRRALEIFDMMRRSG 583
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 369 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 483
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 526
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 156/426 (36%), Gaps = 116/426 (27%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L + + M + G + D Y ++ A C G A + E+ + DV T+
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA----DVNTFD 249
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTP------------------------------- 396
+V+ + A ++ + M++ G P
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + ++++I C G + +A L+E M GC+P++ +IL+ + + A RL
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R ME K F P
Sbjct: 370 RE-----------------------MEKK------------------------GFAPNVV 382
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY I++ + C + + +AL+ EM GL+ N + +I A G ++ A+ +++ M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS- 633
R G +PD+ +Y T I ++++++A +FE + + N +TY T++ A R G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502
Query: 634 -----------LH--------------------EVQQCLAVYQDMWKAGYKANDTYLKEL 662
LH V + L + ++M + G K N+ L
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562
Query: 663 IEEWCE 668
I E C+
Sbjct: 563 ISELCK 568
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 480
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 481 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 571
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 143/338 (42%), Gaps = 64/338 (18%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ + ++ + + L+ + N + + D + LE M G+ + YN ++
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWD----DTRALLE---EMSAKGLTLNSQGYNGMIY 424
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C G E G ++ + ++G D+ +Y+TI+ + + + A + E++L
Sbjct: 425 ALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N IT++++I+A G + A+ L +EM+ GC + N L++A C+
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA---MCK---- 533
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
DGN DR + +E ++ I
Sbjct: 534 --------------------DGNVDRSLVLLEEMAEKGI--------------------- 552
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP +YNIL+ C + RV+ L +M GL+P+ +++ LI+ G + AL
Sbjct: 553 KPNNVSYNILISELCKE-RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+L+ + + + PD++ Y I + + L A L
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 175/452 (38%), Gaps = 50/452 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+ + ++ LR +H P+ + +T+I G ++ + ++ +
Sbjct: 188 LGRANEALALLRGM---ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ F+ ++ ++ + M G M + +Y LL+ C A+ + G
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 304
Query: 349 EVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V +L+V ++T++ A+ K + A ++ E M G P+ T+S L++
Sbjct: 305 RVP--------ELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHTYSILMHG 355
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLS 462
G + A+ L EM + G PN I+L + + +D L + TL+
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415
Query: 463 KTQVALGEDY----DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+Q G Y DG D + + + N P +Y
Sbjct: 416 -SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN--------------------PDICSY 454
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C + +A + + G+ N I++ +I A G + A+++ K M
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G S DVV+Y IK + + ++ L EEM I+PN V+Y L+ S
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI---SELCKERR 571
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ L + + M G + LI C+
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 129/379 (34%), Gaps = 67/379 (17%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV SYN++L A A +Y + H + + FT+ +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVH---RDRVPPTTFTFGVAARALCR 187
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + M G P+ + + ++I+A + G V +A L EML
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML---------- 237
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ + FD R LG R+ + +T
Sbjct: 238 ---LMGCAADVNTFDDVVR---------GMCGLG--------RVREAARLVDRMMTK--- 274
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTI 553
P TY L++ C RV+ +G P N + +
Sbjct: 275 --------------GCMPGVMTYGFLLQGLC----RVRQADEARAMLGRVPELNVVLFNT 316
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I C G + A ++ + M G PD Y+ + + R+ A L EM+
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG 376
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE----- 668
PN+VTY +L + + G + + A+ ++M G N +I C+
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTR---ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433
Query: 669 ---GVIQDKNQNQGEVTLC 684
G+IQ+ +C
Sbjct: 434 EAMGLIQEMRSQGCNPDIC 452
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G + + + +++ +L++ +N L+ D + +L + + M + G+ + SY
Sbjct: 500 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 559
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NIL+ C A E+ K + +G L D+ TY+T++ W AL + E
Sbjct: 560 NILISELCKERRVRDALELS---KQMLNQG-LAPDIVTYNTLINGLCKMGWMHAALNLLE 615
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + V P+ IT++ LI+ L++ A L + A C
Sbjct: 616 KLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 52/408 (12%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + G+ ++ ALR +++++ +Y +I G G + + ++ +
Sbjct: 180 LVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSM 239
Query: 283 RSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
RS V N+ +NSL++ A D ++ + M G++ D +YN LL C G
Sbjct: 240 RSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGM 299
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQ++ E ++ KG+++ D FTY+T + +A +V E+M S V P +
Sbjct: 300 WETAQKLLSE---MDQKGIVR-DAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVV 355
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S++I+ CA A L+E A++L+EEM + N ++ + +FD A
Sbjct: 356 TYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAI------ 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
G + + K + +T Y +D+
Sbjct: 410 --------------GQCKEMESCGMK-RDVVTYNALLSGYGRYGMYDE------------ 442
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
V+ L EM+ + PN ++++ +ID G + A+ + K ++ +
Sbjct: 443 ------------VRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQL 490
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DVV YT+ I ++ ++ + L M I+PN+VT+ +++ A
Sbjct: 491 EVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 185/456 (40%), Gaps = 95/456 (20%)
Query: 224 FCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ ++EFG + A + +D K++ + T+I G G+ + ++E
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R + +Y F+++++ + F+ ++++++M+ GV ++ SYN L+ A
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAG----- 258
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AKG + DV +VK F ++ML+ G+ P+ +
Sbjct: 259 ---------------AKGEVDFDV-----VVKFF-------------DEMLAEGIVPDRL 285
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL++ CA+ G+ E A L EM Q G ++ N L + Q D A R+
Sbjct: 286 TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEE- 344
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+S +V PT TY+
Sbjct: 345 -MSSRRVW---------------------------------------------PTVVTYS 358
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C AL EM+ +S + +S+ ++ G + A+ K M
Sbjct: 359 TMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESC 418
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
GM DVV Y + R + LFEEMK + I PN +TY T++ ++ G
Sbjct: 419 GMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMF--- 475
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQ 672
Q+ + VY+D KA + + + +I+ C+ G+++
Sbjct: 476 QEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVE 511
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y+ M G D+ +YNIL+ C G A + E +E KG ++ TYST+
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE---MEEKGCAP-NIVTYSTL 392
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F W A + + M + G + N+ ++ +I A G +++AM L +EM GC
Sbjct: 393 LHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGC 452
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-- 487
+P+ N ++ Q D A +F + L + VA G Y+ I + H +
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGN-LLEEGVVANGITYN---TLIHALLHSGRWQ 508
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
+ + V H D +YN L+KA C + R L+ EM T G+
Sbjct: 509 EGLRLANEMV--LHGCPLD--------VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIK 558
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+ S+ +LI+ +G V AL++ K M G++PD+V Y T I + A +L
Sbjct: 559 PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNL 618
Query: 606 FEEMKHYQIQPNLVTYITLL 625
E++ + + P++VTY L+
Sbjct: 619 LEKLPNENVHPDIVTYNILI 638
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 26/324 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R D ++ +PN+ T++ G + +RA+ + + ++ ++N +N ++
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D K + + + M+ G D+ +YN ++ C A+ I+G +L +
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG---NLLEE 485
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+T++ + WQ L++ +M+ G + ++++ LI A G V++
Sbjct: 486 GVVA-NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDR 544
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+M L EEM+ G +PN+ N+L+ E C +A ++ + LSK + G D T
Sbjct: 545 SMMLLEEMMTKGIKPNNFSYNMLIN---ELC---KAGKVRDALELSKEMLNQGLTPDIVT 598
Query: 477 -DRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ + N K + N +PN + P TYNIL+ C
Sbjct: 599 YNTLINGLCKVGWTHAALNLLEKLPNE---------NVHPDIVTYNILISWHCKVRLLDD 649
Query: 534 A--LMNEMRTVGLSPNHISWTILI 555
A L+++ + G+ PN +W +++
Sbjct: 650 ASMLLDKAVSGGIVPNERTWGMMV 673
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 176/453 (38%), Gaps = 52/453 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+ RD ++ LR +H P+ + +T+I G ++ + +++ +
Sbjct: 193 LGRARDALALLRGM---ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAAD 249
Query: 291 IYVFNS--LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ FN L ++ + M G + +Y LL+ C T A E Y
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC---RTRQADEAYA 306
Query: 349 EVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ V +++V +T+++ A+ K + A ++ E M S G P+ T++ L++
Sbjct: 307 MLGR-----VPEVNVVMLNTVIRGCLAEGKLAR-ATELYEMMGSKGCPPDVHTYNILMHG 360
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----------R 457
G A+ + +EM + GC PN + LL + +D A +
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMN 420
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S + ALG+D G D + + K KP T
Sbjct: 421 SQGYNGIIYALGKD--GKLDEAMRLVQEMKSQ--------------------GCKPDICT 458
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C + +A + + G+ N I++ LI A SG + L++ M
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G DVV+Y IK + + ++ L EEM I+PN +Y L+ + G
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAG--- 575
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+V+ L + ++M G + LI C+
Sbjct: 576 KVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 608
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYM-KSRAIYED 281
+ + GK L A+R K P++ TII +C D M ++ I+ +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN--NDQMDEAEHIFGN 481
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L + V N +N+L++ H ++ L + M G D+ SYN L+KA C GN
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ + E + KG+ K + F+Y+ ++ A + AL++ ++ML+ G+TP+ +
Sbjct: 542 VDRSMMLLEE---MMTKGI-KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 597
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
T+++LIN G A++L E++ P+ NIL+
Sbjct: 598 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 174/458 (37%), Gaps = 66/458 (14%)
Query: 271 DYMKSR-AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
D M R A+ RS N V ++L + H L +Y+ M + V ++ +
Sbjct: 133 DQMPRRFAVTPSFRSYNA-----VLSTLARADCH--ADALLLYRRMLRDRVPPTTFTFGV 185
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+A C G A++ ++ + G + D Y T++ A + ++M
Sbjct: 186 AARALCRLGR---ARDALALLRGMARHGCVP-DAVLYQTVIHALVAQGGVAEAATLLDEM 241
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G + T++ ++ G V +A L + M+ GC P+ LL+ Q
Sbjct: 242 LLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301
Query: 450 DRAF----RLFRSWTLSKTQVALGEDYDGNTDRISN----MEHKDKQSITNTPNFVPN-- 499
D A+ R+ + V G +G R + M K +T N + +
Sbjct: 302 DEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Query: 500 -------SHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
S D+ P TY+ L+ + C + + +A++++M G S N
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +I A G G ++ A+++++ M+ G PD+ Y T I + ++ +A +F
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE-------------------------------- 636
+ + N +TY TL+ A G E
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
V + + + ++M G K N+ LI E C+ G ++D
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 35/323 (10%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
FT+ + + AL + M G P+ + + ++I+A G V +A L +E
Sbjct: 181 FTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDE 240
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML GC + N ++ A RL DR+ M
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARL--------------------VDRM--MM 278
Query: 484 HKDKQSITNTPNFVPNS--HYSSFDKRFSFKPTTTTYNILM-----KACCTD--YYRVKA 534
H S+ T F+ D+ ++ N++M + C + R
Sbjct: 279 HGCTPSVV-TYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATE 337
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M + G P+ ++ IL+ G A+++L M E G +P++V Y+T +
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+ A ++ ++M N Y ++ A + G L E + + Q+M G K
Sbjct: 398 RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMR---LVQEMKSQGCKP 454
Query: 655 NDTYLKELIEEWCEGVIQDKNQN 677
+ +I C D+ ++
Sbjct: 455 DICTYNTIIYHLCNNDQMDEAEH 477
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 168/409 (41%), Gaps = 72/409 (17%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMA 322
G K A+ ++ ++ + + +N++++ V A LKF M+ +G++
Sbjct: 328 GFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA-----EMRAMGLLP 382
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN +L C AGN A + G+++ + L V TY+T++ + + A
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLR----RAGLAPTVLTYNTLIDGYCRLGGLEEA 438
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++KE+M+ G P+ T++ L+N + A F+EML G +P+ N + A
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ +AF+L L
Sbjct: 499 ELILGDTHKAFQLREVMMLK---------------------------------------- 518
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T TYN+++ C + K L +M + GL P+ I++T LI A
Sbjct: 519 -------GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCE 571
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G + A ++L M DG+ P VV YT I C R L A+ F +M I+PN +T
Sbjct: 572 RGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631
Query: 621 YITLLRARSRYGSLHEVQQCLAV--YQDMWKAGYKANDTYLKELIEEWC 667
Y L+ A R G + LA + +M + G N LI+ C
Sbjct: 632 YNVLIHALCRTG-----RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNC 675
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 52/282 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++V DA W V +ML + P +T+++L+++ G ++A L
Sbjct: 207 DVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLL 266
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+EM GC N N+++ + A +L S
Sbjct: 267 KEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-------------------- 306
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMN 537
R S K ++ TYN L+ A + +V+AL
Sbjct: 307 ----------------------------RLSKKASSFTYNPLITALLERGFVQKVEALQM 338
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P +++ +I S VE A MR G+ PD++ Y + + ++
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAG 398
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
LK+A L +++ + P ++TY TL+ R G L E ++
Sbjct: 399 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 6/226 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R+L A +D P+ + T I I GD K+ + E + + + +
Sbjct: 466 KVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTV 525
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N +++ +LK ++ M G+ D +Y L+ A C G L E +
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG---LLSEARKLL 582
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G L+ V TY+ ++ A ML G+ PN IT++ LI+A
Sbjct: 583 NGMVSDG-LQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G A H F EML+ G PN +L+ + A RL+
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLY 687
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P+ IID G+C G+ ++ + + S + + + L++ + L
Sbjct: 522 PDTVTYNVIID--GLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ + +Y IL+ CC GN A YG + + G+ + + TY+ +
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA---YGWFRKMLDVGI-EPNEITYNVL 635
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A +ML G+ PN T++ LI+ G A+ L+ EM Q G
Sbjct: 636 IHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695
Query: 430 EPNSQCCNILLQA 442
P+ N L +
Sbjct: 696 PPDYCTHNALFKG 708
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 188/455 (41%), Gaps = 66/455 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF + D ALR + ++ P +I +I + G G K I+ED+
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + ++ +L + M+K V ++ +YN +L AC G
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGG-- 166
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LD W+ L + M G+ P+ IT
Sbjct: 167 --------------------LD----------------WEGLLNLFAQMRHEGIQPDLIT 190
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++AC++ GLVEQA +F+ M ++G ++ L+ + Q R L R
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM- 249
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK--RFSFKPTTT 516
ED +GN I+ S+ N H ++ F + R P
Sbjct: 250 ---------ED-EGNPPDIAGY-----NSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVE 294
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ + +V++L ++M+ + P ++ LI G G + ++ + M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y+ + VC R ++A + + M + P+L L+ S YG +
Sbjct: 355 VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLI---SSYGKM 411
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ L Y + +AG + LI+ + +G
Sbjct: 412 AMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKG 446
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 11/226 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T++ + G G + + R+++ D++ + + +NSL+ V F ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M GV D A+Y+ LL C G T A +I+ + E+ L+ + ++
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEAS----AGLI 405
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL + AG+ P + +LI A GL +A M +AG +
Sbjct: 406 SSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
N +++A + D A F S+ Q G + D T
Sbjct: 466 APVSSVNSVMEAYSKVGLHDEALEFF-----SELQQKEGSEVDERT 506
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 178/398 (44%), Gaps = 58/398 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
++DV G+ +++ + ++ ++ V ++ +N+L+N V D + E+ M++ G
Sbjct: 188 VVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREG 247
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+A + +Y IL++ + A+++Y E+ + +++DV+ Y++++ A
Sbjct: 248 VVASLVTYTILIEWYASSERIGEAEKVYEEM----CERNVEMDVYVYTSMISWNCRAGNV 303
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A + ++M+ G+ PNT T+ +LI+ AG +E A L EEM G + N N +
Sbjct: 304 RRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTM 363
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + D AFRL Q I
Sbjct: 364 MDGYCKRGMMDEAFRL--------------------------------QDIM-------- 383
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+R F+ TYNIL C Y K ++N M G++PN ++ I+
Sbjct: 384 -------ERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEI 436
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN+ + L+ + + G+ P++V Y T I +++++KQA L EM + P+
Sbjct: 437 YCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPD 496
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ TY +L+ + +V + L ++ +M G + N
Sbjct: 497 VFTYTSLIHGEC---IVDKVDEALKLFNEMLVKGIRGN 531
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 49/245 (20%)
Query: 258 ICRTIID--------VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAH 303
ICR I+ + G+C G + + E+++ + V LN+ +FN++M+
Sbjct: 314 ICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMM 373
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACC-------------------LAGNTVLAQ 344
D F L+ M++ G AD+ +YNIL C +A N V
Sbjct: 374 DEAFRLQ--DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCA 431
Query: 345 ---EIYGE----------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
EIY + ++++E +GV+ ++ TY+T++ ++ + + A +K +M+
Sbjct: 432 TFIEIYCQEGNLAEPERFLRNIEKRGVVP-NIVTYNTLIDAYSKNEKVKQAHXLKAEMVE 490
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ T++SLI+ V++A+ LF EML G N + ++ + + D
Sbjct: 491 KGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADE 550
Query: 452 AFRLF 456
A +L+
Sbjct: 551 ALKLY 555
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R K LMNEM G+ P ++ L++AC + EG +IL +M +G+ +V YT I
Sbjct: 200 RAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILI 259
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ S+R+ +A ++EEM ++ ++ Y +++ R G+ V++ A++ +M
Sbjct: 260 EWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGN---VRRASALFDEMICR 316
Query: 651 GYKANDTYLKELIEEWCEG 669
G N LI C+
Sbjct: 317 GIVPNTXTFGALISGVCKA 335
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYN L+ AC D V ++ M G+ + +++TILI+ S + A ++
Sbjct: 215 PTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKV 274
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M E + DV YT+ I R+ +++A +LF+EM I PN T+ L+ +
Sbjct: 275 YEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCK 334
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
G + + L ++M G N +++ +C+ + D+
Sbjct: 335 AGQMEAAEILL---EEMQCKGVDLNVVIFNTMMDGYCKRGMMDE 375
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+N++K GV+ ++ +YN L+ A + N + Q + + +E KG+L DVFTY++++
Sbjct: 451 RNIEKRGVVPNIVTYNTLIDA--YSKNEKVKQAHXLKAEMVE-KGLLP-DVFTYTSLIHG 506
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
ALK+ +ML G+ N T++++I+ + G ++A+ L++EM++ G P+
Sbjct: 507 ECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPD 566
Query: 433 SQ 434
+
Sbjct: 567 DR 568
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 133/345 (38%), Gaps = 60/345 (17%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
S I++ C G A+E+ E + A+GV+ VFTY+T++ K + ++
Sbjct: 184 SLTIVVDVLCRRGEVGRAKELMNE---MAARGVVP-TVFTYNTLLNACVVRKDREGVDEI 239
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M GV + +T++ LI A++ + +A ++EEM CE N + + + +
Sbjct: 240 LGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEM----CERNVEMDVYVYTSMI- 294
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
SW GN R S + F
Sbjct: 295 ------------SWNCRA----------GNVRRASAL----------------------F 310
Query: 506 DKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D+ P T T+ L+ C + L+ EM+ G+ N + + ++D
Sbjct: 311 DEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKR 370
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A ++ IM G DV Y + R ++A + M + PN+VT
Sbjct: 371 GMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTC 430
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
T + + G+L E ++ L +++ K G N LI+ +
Sbjct: 431 ATFIEIYCQEGNLAEPERFL---RNIEKRGVVPNIVTYNTLIDAY 472
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 241 LRAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
L Y+ +K+ L+ +PN+ C T I++ G+ + ++ + V NI
Sbjct: 405 LHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVT 464
Query: 294 FNSLMNV--------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N+L++ AH LK M + G++ D+ +Y L+ C+ A +
Sbjct: 465 YNTLIDAYSKNEKVKQAHXLK------AEMVEKGLLPDVFTYTSLIHGECIVDKVDEALK 518
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E + KG+ + +V TY+ I+ + ALK+ ++M+ G+ P+ + +L+
Sbjct: 519 LFNE---MLVKGI-RGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV 574
Query: 406 NA 407
+
Sbjct: 575 GS 576
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R AL +EM G+ PN ++ LI +G +E A +L+ M+ G+ +VV + T +
Sbjct: 305 RASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMM 364
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + +AF L + M+ + ++ TY L S LH ++ V M +
Sbjct: 365 DGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILA---SGLCKLHRYEEAKRVLNVMVEK 421
Query: 651 GYKANDTYLKELIEEWCE 668
G N IE +C+
Sbjct: 422 GVAPNVVTCATFIEIYCQ 439
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 195/442 (44%), Gaps = 45/442 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
K+ I+ +L+S+ V L+ Y F ++ F + +++ G+ ++ Y L+
Sbjct: 142 KAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
CC GN +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 201 DGCCKYGNVMLAKNLFCKMDRLG----LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 257 SGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A +L LS V +G D + M+ T + N SS
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCD-VGKMD---------TAVRLFNQLKSS---- 362
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TYN L+ Y +V+ L + EM ++P+ +++TILIDA
Sbjct: 363 -GLSPTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
E A ++ +M + G+ PDV Y+ I +CV +K+A LF+ + +QPN V Y
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHG-NMKEASKLFKSLGEMHLQPNSVIY 476
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
T++ + GS + + L + +M +G N I C +D+ + E+
Sbjct: 477 NTMIHGYCKEGSSY---RALRLLNEMVHSGMVPNVASFCSTIGLLC----RDEKWKEAEL 529
Query: 682 TLCRRTNSQRPQSLLLEKVAVH 703
L + NS S+ L K+ VH
Sbjct: 530 LLGQMINSGLKPSVSLYKM-VH 550
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 169/376 (44%), Gaps = 26/376 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM++ G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + G ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + ++ ++V Y D + + + +K
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT----YTILIDAFARLNYTEK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S ++ P TY++L+ C + L + + L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQ 470
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++L M GM P+V ++ + I + R ++ K+A L
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELL 530
Query: 606 FEEMKHYQIQPNLVTY 621
+M + ++P++ Y
Sbjct: 531 LGQMINSGLKPSVSLY 546
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 21/274 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y TIV + + AL M+ G P + T+++L+ + ++A +F E L
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNE-L 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ ++ I+++ C EA F + FRL + LS V DG + M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K+ + VPN H TY++LM + + + M+
Sbjct: 211 LAKNLFCKMDRLGLVPNPH---------------TYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ PN ++ LI G V+ A ++ MRE G++ V+ Y I R K+
Sbjct: 256 RSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+A L ++ + PN+VTY L+ G +
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKM 349
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 136/351 (38%), Gaps = 28/351 (7%)
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T + +++NA ++ +QA+ M+ G P S N L+ + + FD+A+ +F
Sbjct: 89 TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
K++V L D + I + FV + + F P
Sbjct: 149 EL---KSKVVL----DAYSFGIM------IKGCCEAGYFVKGFRLLAMLEEFGLSPNVVI 195
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ CC + K L +M +GL PN ++++L++ G Q+ + M+
Sbjct: 196 YTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P+ AY I + +AF +F EM+ I ++TY L+ R
Sbjct: 256 RSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL 695
E + + + K G N LI +C D + V L + S
Sbjct: 316 EA---VKLVHKVNKVGLSPNIVTYNILINGFC-----DVGKMDTAVRLFNQLKSSGLSPT 367
Query: 696 LLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGTDEF 746
L+ + S ENLA L + ++E R I + K Y++ D F
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS-----KVTYTILIDAF 413
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 187/446 (41%), Gaps = 45/446 (10%)
Query: 195 FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
F + L V D+ + + R+D VRE R L L A S + +
Sbjct: 322 FPVSNLNVADADLRSPLHRSASQHRSDGSLAPQVREIRSTRQLNKILSALYKSGRAADA- 380
Query: 255 NMYICRTI-------IDVC---------GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+ +CR + IDV G CG ++ ++ + V N + F++L
Sbjct: 381 -LSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALF 439
Query: 299 NVNAHDLKFTLEVYKNMQKLGVM----ADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
D F + + Q + ++ YN +LK AG A ++ G+ +E
Sbjct: 440 GA-LTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQ---ME 495
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++ D+ TY TI+ + A + +A V + M G+ PN ++SLI+ACA AGL
Sbjct: 496 QNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLP 555
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA LF ++ G E + CN LL A A +RAF+ F ++ G+
Sbjct: 556 DQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEM---RSAGVRGDRITF 612
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR- 531
NT + ++ + + +F+ K+ + TTYN L+ AC
Sbjct: 613 NTLITAAARAREF-----------DKAWKAFETMKKSNISADATTYNALIDACSKSGMTE 661
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
AL NEMR L P ++ LI AC ++ A Q+L +M G+ PD +
Sbjct: 662 LAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILL 721
Query: 591 KVCVRSKRLKQAFSLFEEMK-HYQIQ 615
C R++ A SL E + +Y+++
Sbjct: 722 TACARNEDFDYAISLVREFETNYRVR 747
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 54/316 (17%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E +G +++DV +YS ++ A+++ M+ GV PN T+S+L A +
Sbjct: 387 VEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGA 446
Query: 413 LVEQAMHLFEEMLQAGC--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+QAM LF+ M++A E N N +L+ A + D A
Sbjct: 447 FFDQAMRLFQ-MIRASYPNELNVVVYNAVLKYVGRAGRIDAAL----------------- 488
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
D + ME + +P TY ++ C D
Sbjct: 489 ------DLLGQMEQNR-----------------------NVQPDIVTYGTILDICAKKQD 519
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A+++ MR G+ PN+ + LIDAC +G + A + + +R +G+ D+
Sbjct: 520 VSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNA 579
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ R+K +++AF FEEM+ ++ + +T+ TL+ A +R E + ++ M
Sbjct: 580 LLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAAR---AREFDKAWKAFETMK 636
Query: 649 KAGYKANDTYLKELIE 664
K+ A+ T LI+
Sbjct: 637 KSNISADATTYNALID 652
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 139/347 (40%), Gaps = 55/347 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M + GV + +++ L A A ++ + + A +L+V Y+
Sbjct: 417 IEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLF---QMIRASYPNELNVVVYNA 473
Query: 369 IVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K A AL + M + V P+ +T+ ++++ CA V A + + M +
Sbjct: 474 VLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKR 533
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G PN+ C L+ AC A D+A LFR A G +YD
Sbjct: 534 GMRPNNFCYASLIDACARAGLPDQAESLFRQLR------AEGLEYD-------------- 573
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
F+ N+ +F + + R EMR+ G+ +
Sbjct: 574 -------LFICNALLGAFARAKMVE------------------RAFQAFEEMRSAGVRGD 608
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LI A + + A + + M++ +S D Y I C +S + AF+LF
Sbjct: 609 RITFNTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFN 668
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
EM+ +QP + T+ L+ A ++ + Q L VY D +
Sbjct: 669 EMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTF 715
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 196/442 (44%), Gaps = 45/442 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
K+ I+ +L+S+ V L+ Y F ++ F + +++ G+ ++ Y L+
Sbjct: 142 KAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
CC GN +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 201 DGCCKDGNVMLAKNLFCKMNRLG----LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A +L LS V +G D + S N + +S S
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDV------RKMDSAVRLFNQLKSSGLS----- 365
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TYN L+ Y +V+ L + EM ++P+ +++TILIDA
Sbjct: 366 ----PTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ E A ++ +M + G+ PDV Y+ + +CV +K+A LF+ + +QPN V Y
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHG-NMKEASKLFKSLGEMHLQPNSVIY 476
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
T++ + GS + + L + +M ++G N I C +D+ + E+
Sbjct: 477 NTMIHGYCKEGSSY---RALRLLNEMVQSGMVPNVASFCSTIGLLC----RDEKWKEAEL 529
Query: 682 TLCRRTNSQRPQSLLLEKVAVH 703
L + NS S+ L K+ VH
Sbjct: 530 LLGQMINSGLKPSVSLYKM-VH 550
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 169/376 (44%), Gaps = 26/376 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM++ G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + ++ ++V Y D + + H +K
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT----YTILIDAFARLNHTEK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S ++ P TY++L+ C + L + + L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQ 470
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++L M + GM P+V ++ + I + R ++ K+A L
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELL 530
Query: 606 FEEMKHYQIQPNLVTY 621
+M + ++P++ Y
Sbjct: 531 LGQMINSGLKPSVSLY 546
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 122/291 (41%), Gaps = 28/291 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y T+V + + AL M+ G P + T+++L+ + ++A +F E L
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNE-L 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ ++ I+++ C EA F + FRL + LS V DG + M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSF--------------------DKRFSFKPTTTTYNILM 522
K+ N VPN H S KR P YN L+
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGM 579
C D KA + EMR G++ +++ ILI C G E A++++ + + G+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE-AVKLVHKVNKVGL 329
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
SP++V Y I +++ A LF ++K + P LVTY TL+ S+
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 134/351 (38%), Gaps = 28/351 (7%)
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T + +++NA ++ +QA+ M+ G P S N LL + + FD+A+ +F
Sbjct: 89 TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
K++V L G + FV + + F P
Sbjct: 149 EL---KSKVVLDAYSFGIMIK----------GCCEAGYFVKGFRLLAMLEEFGLSPNVVI 195
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ CC D K L +M +GL PN ++++L++ G Q+ + M+
Sbjct: 196 YTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P+ AY I + +AF +F EM+ I ++TY L+ R
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL 695
E + + + K G N LI +C D + V L + S
Sbjct: 316 EA---VKLVHKVNKVGLSPNIVTYNILINGFC-----DVRKMDSAVRLFNQLKSSGLSPT 367
Query: 696 LLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGTDEF 746
L+ + S ENLA L + ++E R I + K Y++ D F
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS-----KVTYTILIDAF 413
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 84/464 (18%)
Query: 219 RADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-KSR 276
R D+ N V + G+ ++ +A + + A + PN Y+C T+I G CG + ++
Sbjct: 179 RVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALG-CGRRLSQAL 237
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ + + I+ FN+LM +E+++ M+KLG++ D ++ L+ A
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297
Query: 335 CLAGNTVLAQEI---------------YGEV--------KHLEAKGVLK--------LDV 363
AG AQ Y E+ K EA G+ + L +
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKL 357
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+Y+ ++ + W+ A++ + G+TP+ ++WSSLI+ACANAG E+A+ + E
Sbjct: 358 ESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLER 417
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + C+PN V C +A++ KT GN ++ +
Sbjct: 418 MKTSDCQPN----------VVSWCGLLKAYQ--------KT---------GNWEKAEEIF 450
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
H S S S+++K +K T + ++ +G
Sbjct: 451 HAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYT------------------IEKLEELG 492
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ + ++W+ I A +G E A + K M + G P++V Y++ IK ++A
Sbjct: 493 MKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAE 552
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S+F+ M I+PN LLRA YG E+++ + ++ M
Sbjct: 553 SVFKLMLRVGIRPNPQACCALLRA---YGKGKELEKVIIFFESM 593
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 21/315 (6%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L++DV + + +V + W A KV SAGV PN ++LI A + QA+
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQAL 237
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF M +AG E N L+ AC D A LF + K + DR
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEE--MEKLGIV--------PDR 287
Query: 479 ISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---A 534
I+ S T + + + F Y I M+ C + +
Sbjct: 288 IT---FTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEY-IEMQWACARARKPREAYG 343
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M G S+ L+ A + E A++ +++ G++PDV+++++ I C
Sbjct: 344 LFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACA 403
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ + ++A + E MK QPN+V++ LL+A + G+ + ++ ++ M +G
Sbjct: 404 NAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEE---IFHAMLDSGCPP 460
Query: 655 NDTYLKELIEEWCEG 669
N+ L+ + +G
Sbjct: 461 NEVAWCSLLSAYEKG 475
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 262 IIDVCGI------CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ CG+ G++ K+ I+ + N + SL++ K L +
Sbjct: 427 VVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIE 486
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+++LG+ D+ +++ + A AG LA+E + K + G L ++ TYS+++K +
Sbjct: 487 KLEELGMKLDVVAWSTTISALAKAGQWELAEEKF---KQMTKSGCLP-NIVTYSSLIKAY 542
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-LQAGCEPN 432
D W+ A V + ML G+ PN +L+ A +E+ + FE M Q G EP+
Sbjct: 543 GDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPD 602
Query: 433 SQCCNILLQACVEACQFDRAFR 454
+ AC ++ RA +
Sbjct: 603 KYAYAAIFWACWTCGEWQRAVK 624
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 46/243 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR----A 277
+ +C ++ + K + A + A PN + C + Y K R
Sbjct: 428 VSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNE------VAWCSLLSAYEKGRQWKKV 481
Query: 278 IY--EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKA 333
+Y E L + L++ +++ ++ A ++ L E +K M K G + ++ +Y+ L+KA
Sbjct: 482 LYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKA 541
Query: 334 CCLAGNTVLAQEI----------------------YGEVKHLEAKGV----------LKL 361
G A+ + YG+ K LE + ++
Sbjct: 542 YGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEP 601
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D + Y+ I WQ A+K + M AG TP+++ +++LIN G +++AM +
Sbjct: 602 DKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVL 661
Query: 422 EEM 424
E M
Sbjct: 662 ERM 664
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 33/351 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ + K+G + +Y ++K C G+T A ++ +K +E KG K DV Y+T
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL---LKKMEEKGC-KPDVVAYNT 216
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+ +M+ G+ PN +T+SS+++ N G + +A LF++M+
Sbjct: 217 VIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN 276
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNT 476
PN+ IL+ + A R+F T + T AL + Y D
Sbjct: 277 VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSS-------------FDKRFSFKPTTTTYNILMK 523
M K N + N H S +D+ + P T TY+ LM+
Sbjct: 337 KLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLT--PDTVTYSTLMQ 394
Query: 524 ACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + L EM + GL P+ I+++IL+D G+++ A ++LK M+E + P
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ Y I+ +L+ A LF + IQP++VTY ++ + G
Sbjct: 455 HICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEG 505
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 153/389 (39%), Gaps = 60/389 (15%)
Query: 286 NVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
N+ N+Y L+N H + F M KLG+ ++ LL C +
Sbjct: 99 NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E+ K + TY+TI+K AL++ + M G P+ + +
Sbjct: 159 DAVKLFDEI----GKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+++I++ +AM+ F EM+ G PN + +L Q + A LF
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF----- 269
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
KQ I N +PN T T+ IL
Sbjct: 270 -------------------------KQMIGR--NVMPN---------------TVTFTIL 287
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + ++A + M G+ P+ +++ L+D ++ A ++ IM G
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P V Y I +S+RL +A +L EM + P+ VTY TL++ + G Q+
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++++M G + L++ C+
Sbjct: 408 ---LFKEMCSYGLLPDSITYSILLDGLCK 433
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 20/286 (6%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ ++P++IT + N V A+ F ++L P N LL + V+ +
Sbjct: 27 TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF- 509
L + LS + + T I+ + H ++ + + +S+ K F
Sbjct: 87 TVISLCKQMDLSNIR----PNVYTLTILINCLCHSNRDHV--------HFAFSALGKMFK 134
Query: 510 -SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+PT T+ L+ C+ + A L +E+ +G +P+ I++T +I G+
Sbjct: 135 LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN 194
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
ALQ+LK M E G PDVVAY T I + +R +A F EM I PN+VTY ++L
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVI 671
G L+E ++++ M N L++ C EG+I
Sbjct: 255 GFCNLGQLNEAT---SLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 174/450 (38%), Gaps = 96/450 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-- 279
I + ++ K +AL+ ++ P++ T+ID +C D + A+Y
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID--SLCKDRRANEAMYFF 234
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ Q + N+ ++S+++ N L ++K M VM + ++ IL+ C
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---- 393
G + A+ ++ + + GV + D +TYS ++ + A K+ + M+ G
Sbjct: 295 GMILEARRVF---EMMTENGV-EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350
Query: 394 -------------------------------VTPNTITWSSLINACANAGLVEQAMHLFE 422
+TP+T+T+S+L+ AG + A LF+
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM G P+S +ILL + D AFRL ++ SK +
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE----------------- 453
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEM 539
P YNIL++ C ++ +++A L + +
Sbjct: 454 ------------------------------PHICIYNILIQGMC-NFGKLEAARELFSNL 482
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ +++T++I G A ++ + M +G P+ Y AI+ +R+
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
A L EEM + T+ LL S
Sbjct: 543 SNAVRLIEEMVGRGFSADSSTFQMLLDLES 572
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/412 (17%), Positives = 154/412 (37%), Gaps = 62/412 (15%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNI------YVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
G C +Y ++ + + S N L I VFN L+ V + + K M
Sbjct: 39 GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ ++ + IL+ C + N + + + G+ V T+ T++
Sbjct: 99 NIRPNVYTLTILINCLCHS-NRDHVHFAFSALGKMFKLGLQPTHV-TFGTLLNGLCSKAK 156
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+K+ +++ G P+ IT++++I G A+ L ++M + GC+P+ N
Sbjct: 157 IIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNT 216
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ + + + + A F Q I
Sbjct: 217 VIDSLCKDRRANEAMYFFSEMV--------------------------DQGI-------- 242
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
P TY+ ++ C +L +M + PN +++TIL+D
Sbjct: 243 -------------PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD 289
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + A ++ ++M E+G+ PD Y+ + ++ +A LF+ M P
Sbjct: 290 GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP 349
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ Y L+ + L+E + L+ +M+ + L++ +C+
Sbjct: 350 SVRVYNILINGHCKSRRLNEAKTLLS---EMYDRDLTPDTVTYSTLMQGFCQ 398
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 119/318 (37%), Gaps = 54/318 (16%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC--ANAGLVEQAMHL 420
V ++ ++ K + + + + M + + PN T + LIN +N V A
Sbjct: 69 VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSA 128
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+M + G +P LL + A +LF D I
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLF--------------------DEIG 168
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
M F P+ TY ++K C + AL + +
Sbjct: 169 KM---------------------------GFAPSLITYTTIIKGLCKIGHTTNALQLLKK 201
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ +++ +ID+ A+ M + G+ P+VV Y++ + +
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
L +A SLF++M + PN VT+ L+ + G + E ++ V++ M + G + +
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR---VFEMMTENGVEPDAYT 318
Query: 659 LKELIEEWCEGVIQDKNQ 676
L++ +C D+ Q
Sbjct: 319 YSALMDGYCLQSQMDEAQ 336
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + ++ +++T + +++LM A + +++K M G++ D +Y+ILL
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G+ E + +K ++ + + + Y+ +++ + + A ++ ++
Sbjct: 429 DGLCKHGH---LDEAFRLLKAMQESKI-EPHICIYNILIQGMCNFGKLEAARELFSNLFV 484
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +T++ +I+ GL +A +F +M+ GC PNS N+ +Q +
Sbjct: 485 KGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSN 544
Query: 452 AFRLF-----RSWTLSKTQVALGEDYDGNTDRIS 480
A RL R ++ + + D + N + IS
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLLDLESNDEIIS 578
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 200/454 (44%), Gaps = 49/454 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++R + +++ S ++ +
Sbjct: 63 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS--GLCRAGRMDETRVLMDEMASHSMFPD 120
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A+++
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 181 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
+V +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S V +G + +M +KD N + +++ S D +F
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF----- 351
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ +M+ G+S + +++ +L+ S ++ A +++ +R
Sbjct: 352 -----------------LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV+Y T I C +A L +EM Y I+P L TY TL+ A + G +H+
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEW--CE 668
+ +CL YQ M + + + +++ + CE
Sbjct: 455 M-ECL--YQQMLHKNVEPSSSIYGIMVDAYVRCE 485
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 17/316 (5%)
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G D F+Y+ ++ + ALKV ++M+ GV PN IT++++I+ G +
Sbjct: 8 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E L ++ML G +PN N+LL A + D R+ S + G Y
Sbjct: 68 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDET-RVLMDEMASHSMFPDGFTYSI 126
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D ++ + +S T F S K T + IL+ C D KA
Sbjct: 127 LFDGLT----RTGESRTMLSLFA-----ESLKKGVMLGAYTCS--ILLNGLCKDGKVAKA 175
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
++ + GL P + + LI+ ++ GA I + M+ + PD + Y I
Sbjct: 176 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 235
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ + + +A L EM+ + P++ T+ TL+ A YG+ ++++C V DM + G
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA---YGTAGQLEKCFTVLSDMQQKGI 292
Query: 653 KANDTYLKELIEEWCE 668
K++ +++ +C+
Sbjct: 293 KSDVISFGSVVKAFCK 308
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 162/419 (38%), Gaps = 61/419 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ V N +N++++ V DL+ + M G ++ +YN+LL C
Sbjct: 38 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 97
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + + E+ A + D FTYS + + L + + L GV
Sbjct: 98 RAGRMDETRVLMDEM----ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 153
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T S L+N G V +A + E ++ G P + N L+ + AF +
Sbjct: 154 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 213
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F K +P
Sbjct: 214 FEQM-----------------------------------------------KSRHIRPDH 226
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C KA L+ EM G+ P+ ++ LIDA G +G +E +L
Sbjct: 227 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 286
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ G+ DV+++ + +K ++ ++ +A ++ ++M + + PN Y +++ A G
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG- 345
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRP 692
+ +Q + + M +G A+ L++ C D+ + E+ R RP
Sbjct: 346 --DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE---ELIYTLRNQGLRP 399
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
++D++ F + V+ F K + A+ D +PN + +IID GD ++
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E +++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+T A E+ E+ + L+ TY T+V A A + + ML V
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLR----TYHTLVSALASAGRVHDMECLYQQMLHKNVE 468
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
P++ + +++A + L +EM + G
Sbjct: 469 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 24/361 (6%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL---KLDVFTYSTI 369
+ M +LG M D SYNILLK C N A+E E+ H+ A + +V +YST+
Sbjct: 154 QRMPELGCMPDTVSYNILLKGLC---NEKRAEEAL-ELLHMMADDQVWSCPPNVVSYSTV 209
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +M+ G+ P+ +T++++I+ A L ++A +F++M+ G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N L+ + ++ R+ +++ G S + + K
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLE-------EMSAGGPKPNCCTYGSLLNYLCKNG 322
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
F +S KP+ TTY I++ T + L+N M G+SPN
Sbjct: 323 RCREARFFFDSMIGK-----GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
H + I A G ++ A+ I MR+ G+SPD V+Y I + R+ A F
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+M + + P++V + +L+ +V++ ++ +M G N + ++ C
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE---LFFEMLNVGIHPNIVFFNTILCNLC 494
Query: 668 E 668
+
Sbjct: 495 K 495
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 183/437 (41%), Gaps = 35/437 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I+ G K ++ ++ + + ++ + ++++ A V
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M GV ++ +YN L+ G +E+ ++ + A G K + TY +++
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKW---KEVVRMLEEMSAGGP-KPNCCTYGSLLN 316
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + M+ G+ P+ T+ +++ A G + + L M+ G P
Sbjct: 317 YLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISP 376
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKD 486
N NI A + D+A +F R LS V+ G D R+ + E K
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436
Query: 487 KQSITN--TPNFVPNSHY----SSFDK------------RFSFKPTTTTYNILMKACCTD 528
Q I TP+ V S + DK P +N ++ C +
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE 496
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
++ L++ + +G+ P+ IS+ LID +G ++ A ++L+ M G+ PD +Y
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + ++ R+ A+S F +M I P +VTY T+L + E ++ +Y +
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE---LYLN 613
Query: 647 MWKAGYKANDTYLKELI 663
M +G K D Y +I
Sbjct: 614 MINSGTKW-DIYTYNII 629
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 159/399 (39%), Gaps = 55/399 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F F + K + A+ ++ ++ SP+ +ID G + + +
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT +I VF+SL+ + E++ M +G+ ++ +N +L C G
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ Q + V +E GV + DV +Y+T++ A A K+ E M+S G+ P++ +
Sbjct: 500 MEGQRL---VDSIECMGV-RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG ++ A F +ML G P N +L + +F A L+ +
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S T K TYNI
Sbjct: 616 NSGT-----------------------------------------------KWDIYTYNI 628
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C +A + + + GL N I++ I+I A G E A+ + + +G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ +VV Y ++ + L++ SLF M+ PN
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 189/446 (42%), Gaps = 75/446 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
PN+ TI+ C +C G M+ + + + + V ++ +N+L ++ H L T++
Sbjct: 481 PNIVFFNTIL--CNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL--IDGHCLAGTIDE 536
Query: 311 ---VYKNMQKLGVMADMASYNILLKACCLAG------------------------NTVL- 342
+ + M +G+ D SYN LL C AG NT+L
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596
Query: 343 ---AQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ + E K L + K D++TY+ I+ + A+K+ +++ S G+
Sbjct: 597 GLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL 656
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC---QFDRAF 453
N IT++ +I A G E AM LF + G N ++++ +E +FD F
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716
Query: 454 R-LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR-FSF 511
+ ++ T +Q+ + + H+ S ++ S D+R FS
Sbjct: 717 SAMEKNGTAPNSQML--------NALVRRLLHRGDISRA-------GAYLSKLDERNFSV 761
Query: 512 KPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ +TT+ +L+ +D Y+ K+L + R + N + + LI + ++ A
Sbjct: 762 EASTTS--MLISIFSSDEYQHHAKSLPKKYRIL----NEANSSALIKK---ARRIDDAYS 812
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + M G++PDVV Y T + ++ R +A L+ M + + Q N+ TY +L
Sbjct: 813 LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC 872
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ V + ++Q + G + N
Sbjct: 873 KSNC---VDEAFKMFQSLCSKGLQLN 895
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 166/410 (40%), Gaps = 37/410 (9%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S +T + +N++++ +F+ E+Y NM G D+ +YNI+L C
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ A +++ ++L +KG L+L++ T++ ++ + A+ + + + G+
Sbjct: 636 SNCVDEAIKMF---QNLCSKG-LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ 691
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---- 452
N +T+ ++ G +E+ LF M + G PNSQ N L++ + RA
Sbjct: 692 NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 751
Query: 453 -------FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP------- 498
F + S T + ++Y + + K I N N
Sbjct: 752 SKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPK-----KYRILNEANSSALIKKARR 806
Query: 499 -NSHYSSFDKRF--SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTI 553
+ YS F + P TYN ++ + K L M N ++ I
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+++ S V+ A ++ + + G+ +++ + I ++ R + A LF +
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ P++VTY + GSL E ++ M K+G + L L+
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFD---GLFLTMEKSGTPLDSRLLNALV 973
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDA-CGGSGNVE 565
P TY+IL+ C R+ L + GL +HI L++ C G E
Sbjct: 92 PNRCTYSILIGCFC----RMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI---QPNLVTYI 622
+L+ M E G PD V+Y +K KR ++A L M Q+ PN+V+Y
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
T++ G +V + ++ +M G + +I+ C+ + D+ +
Sbjct: 208 TVINGFFTEG---QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAE 258
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 180/429 (41%), Gaps = 62/429 (14%)
Query: 210 AIRYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDA-SKKHLS-SPNMYICRTIIDVC 266
A+ C R D++ + V K + ALR D S++ L P++ T++D
Sbjct: 160 ALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD-- 217
Query: 267 GIC--GDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
G+C G ++ A E S N +N L++ ++ E+ + M+ GV
Sbjct: 218 GLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV 277
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ + N ++ C AG T A E + E + + +G K + TYST+V
Sbjct: 278 PQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNNVG 335
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA+++ + +S G +P+ I + ++I+ AG +E A + M +AG + +++ NIL+
Sbjct: 336 MAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
F R RL ++ L +
Sbjct: 396 AG------FCRKKRLHEAYELLQEM----------------------------------- 414
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
K +P TYN L+ C D+ V L+ +M G P+ I++ L+
Sbjct: 415 ------KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ AL+IL+ M E G+ P+ V Y T I + + A LF+EMK + N+
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528
Query: 619 VTYITLLRA 627
T+ LL+
Sbjct: 529 TTFNALLKG 537
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 175/434 (40%), Gaps = 42/434 (9%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEI 346
+++ FNS++ A D+ +Y MQ V D+ +Y IL+ C AG A +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA--GVTPNTITWSSL 404
+ + ++ DV T +T+V + Q AL E +S+ G PNT+T++ L
Sbjct: 195 LDGMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----WT 460
I+A G + A L E+M G N N ++ A + A FR W
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312
Query: 461 LSKTQVALGEDYDGNTDRISN----ME-HKDKQSITNTPNFV----------------PN 499
K G +N ME +K S ++P+ +
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S K FK T YNIL+ C + L+ EM+ VG+ P+ ++ L+
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+ ++L M +DG P V+ + T + + ++ +A + M I PN
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
V Y TL+ + G +V + ++ +M + AN T L++ ++DKN
Sbjct: 493 NVIYNTLIDFLCKRG---DVDLAIELFDEMKEKSVPANVTTFNALLKG-----LRDKNMP 544
Query: 678 QGEVTLCRRTNSQR 691
+ L + +R
Sbjct: 545 EKAFELMDQMREER 558
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ + M+K G AD+ Y L+ C GN +E++ E + KG+ +V TYS
Sbjct: 88 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDE---MLGKGI-SANVVTYSC 143
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V W+ A V M G+ P+ +T++ LI+ G AM L M++ G
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP++ N+LL C E D AF++ R + G+ D T DK
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVID-AFKILR------MMIEKGKKADVVTYNTLMKGLCDK 256
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ S FD +P T+N+L+ C + KA + +M G
Sbjct: 257 GKVDEALKLFN----SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 312
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++ +L+ C +G ++ A+++ K + + G P+ Y+ I + + L A L
Sbjct: 313 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 372
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
F EM+ + + P L Y TL+ + + GSL +Q +++Q+M A
Sbjct: 373 FCEMRTHGLNPALFDYNTLMASLCKEGSL---EQAKSLFQEMGNA 414
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 25/333 (7%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+LK C G E G ++ + K V D+ +Y+T++ AK + A+ +
Sbjct: 2 NIVLKGLCRNGGVF---EAMGLIREMGRKSV-SPDIVSYNTLINGLCKAKKLKEAVGLLL 57
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M +AG PN++T ++L++ G +++AM L E M + G + + L+
Sbjct: 58 EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSFD 506
DR LF LG+ N S + H + N V N+
Sbjct: 118 NLDRGKELFDEM--------LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----- 164
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TY L+ C D A L+N M G P+++++ +L+ G V
Sbjct: 165 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 224
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYI 622
A +IL++M E G DVV Y T +K ++ +A LF M + ++PN+ T+
Sbjct: 225 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 284
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ + G L + + +++ M K G N
Sbjct: 285 MLIGGLCKEGRL---TKAVKIHRKMVKKGSCGN 314
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 186/444 (41%), Gaps = 44/444 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN C T++D G+C D A + E ++ + ++ ++ +L++ N +L
Sbjct: 66 PNSVTCTTLMD--GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M G+ A++ +Y+ L+ C G A + + A+ + DV TY+ +
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----AEHGIHPDVVTYTGL 179
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + M+ G P+ +T++ L++ GLV A + M++ G
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDRI 479
+ + N L++ + + D A +LF S + + G +G +
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 480 SNMEHK--DKQSITN--TPNFVPNSHYSSFDKR-----------FSFKPTTTTYNILMKA 524
+ K K S N T N + + + F P + TY+IL+
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359
Query: 525 CCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L EMRT GL+P + L+ + G++E A + + M PD
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++++ T I +++ + L +M ++P+ +T+ TL+ S+ G L E + L
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL- 478
Query: 643 VYQDMWKAGYKAN----DTYLKEL 662
+ M +G+ + D+ LK L
Sbjct: 479 --ERMVASGFTPDALVYDSLLKGL 500
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 159/402 (39%), Gaps = 63/402 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSL 297
+A +H P++ +ID G+C D + A + + NVT N+ +
Sbjct: 162 NAMAEHGIHPDVVTYTGLID--GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 219
Query: 298 MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D ++ + M + G AD+ +YN L+K C G A +++ + + +
Sbjct: 220 KEGLVID---AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM--FDNEN 274
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +VFT++ ++ A+K+ M+ G N +T++ L+ C AG +++A
Sbjct: 275 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 334
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
M L++++L G PNS +IL+ + + A LF
Sbjct: 335 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM------------------ 376
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ P YN LM + C + + K+L
Sbjct: 377 -----------------------------RTHGLNPALFDYNTLMASLCKEGSLEQAKSL 407
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM P+ IS+ +ID +G+ + ++ M E G+ PD + ++T I +
Sbjct: 408 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
L +A S E M P+ + Y +LL+ S G E+
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 110/289 (38%), Gaps = 52/289 (17%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + +M V+P+ +++++LIN A +++A+ L EM AGC PNS C L+
Sbjct: 17 AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 76
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L +
Sbjct: 77 GLCKDGRMDEAMELLEAM------------------------------------------ 94
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
K+ F Y L+ C + R K L +EM G+S N ++++ L+
Sbjct: 95 -----KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 149
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + A +L M E G+ PDVV YT I + R A L M +P+ V
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY LL + G V + + M + G KA+ L++ C+
Sbjct: 210 TYNVLLSGLCKEGL---VIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G V A+ +++ M +SPD+V+Y T I ++K+LK+A L EM+ PN VT
Sbjct: 11 NGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 70
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TL+ + G + E + L + M K G+ A+ LI +C
Sbjct: 71 CTTLMDGLCKDGRMDEAMELL---EAMKKKGFDADVVLYGTLISGFC 114
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + +ID G C M ++ ++ ++R+ + ++ +N+LM L+
Sbjct: 348 PNSFTYSILID--GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M D+ S+N ++ AG+ +E+ ++K +E L+ D T+ST+
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMG--LRPDALTFSTL 461
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A E M+++G TP+ + + SL+ ++ G + ++L +M G
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
>gi|428179291|gb|EKX48163.1| hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712]
Length = 557
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 13/281 (4%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + +LI A G +E A M++ G P+ + N LLQACV A A L
Sbjct: 31 PSVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTL 90
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F S L + + G + I + ++ + + +R KP
Sbjct: 91 FSS--LRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM------RRAGCKPDQ 142
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+KAC + R + L+ EM +G+ PN S+ ++ A ++L+
Sbjct: 143 ITYTTLVKACVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQWGKATRLLQR 202
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M EDG+ ++++Y+ I CVR++R+K+A +LFEEM+ I PNL T++ + G
Sbjct: 203 MEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGM 262
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ E Q + + QDM KAN LIE + DK
Sbjct: 263 VDEAQGIMKLLQDMR---IKANAMTFSSLIEAFINAGYADK 300
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 53/353 (15%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ + +L+ L+ E M K G + N LL+AC AGN AQ ++
Sbjct: 32 SVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTLF 91
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ L+ +++ +V +A + + A K+ +M AG P+ IT+++L+ A
Sbjct: 92 SSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKPDQITYTTLVKA 151
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C AG ++A L EM + G PN+ N +L + Q+ +A RL
Sbjct: 152 CVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQWGKATRL------------ 199
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ ME ++ N + + +Y IL C
Sbjct: 200 -----------LQRMEEDGVEA-----NLL-----------------SYSYCIL---ACV 223
Query: 528 DYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
R+K AL EMR G+ PN ++ G V+ A I+K++++ + + +
Sbjct: 224 RARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGMVDEAQGIMKLLQDMRIKANAM 283
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+++ I+ + + +A + +M+ ++ ++V +L+A + G + E
Sbjct: 284 TFSSLIEAFINAGYADKAVEVKRKMEELGVEVDMVVSTQMLKAYTSMGKVEEA 336
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ ++ +G+ L +A + K +P++ + ++ C G+ ++ ++ LR
Sbjct: 36 YGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTLFSSLR 95
Query: 284 SQNVTLNI----YVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ +++ FN ++N A K ++ M++ G D +Y L+KAC A
Sbjct: 96 GAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKPDQITYTTLVKACVAA 155
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ + GE++ L + + ++Y+ I+ A W A ++ + M GV N
Sbjct: 156 GQFDRAERLLGEMEELG----IPPNAYSYNCILYGLAQKLQWGKATRLLQRMEEDGVEAN 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+++S I AC A +++A LFEEM + G PN N ++ D A
Sbjct: 212 LLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGMVDEA 266
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 197 IVQLCVNKPDVNLA------IRYA--CI-VPRADILFCNFVREFGKKRDLVSALRAYDAS 247
++Q CV ++ A +R A CI + + F V + ++R + A +
Sbjct: 74 LLQACVRAGNLTAAQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM 133
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
++ P+ T++ C G + ++ + ++ + N Y +N ++ A L++
Sbjct: 134 RRAGCKPDQITYTTLVKACVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQW 193
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL------------ 353
+ + M++ GV A++ SY+ + AC A A ++ E++
Sbjct: 194 GKATRLLQRMEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTM 253
Query: 354 -----------EAKGVLKL--------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
EA+G++KL + T+S++++ F +A + A++VK M GV
Sbjct: 254 MSGYAAKGMVDEAQGIMKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKMEELGV 313
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-NSQCCNILLQACVEACQFDRAF 453
+ + + ++ A + G VE+A+ EE+++ P +S+ + +L C + + A
Sbjct: 314 EVDMVVSTQMLKAYTSMGKVEEAIEKLEEIVKEASSPVSSRTFDSVLFQCSKRGSKEEAL 373
Query: 454 RLF 456
R+
Sbjct: 374 RVL 376
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTI 553
S++SS S +P+ Y L+KA Y ++ L +N M G +P+
Sbjct: 18 SYFSSSQHPPSLRPSVHCYGTLIKA----YGQLGQLEAAFETLNGMVKGGPAPSIRVINA 73
Query: 554 LIDACGGSGNVEGALQILKIMREDG----MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
L+ AC +GN+ A + +R G + P V++ + R +++++AF + EM
Sbjct: 74 LLQACVRAGNLTAAQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM 133
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ +P+ +TY TL++A G ++ L +++
Sbjct: 134 RRAGCKPDQITYTTLVKACVAAGQFDRAERLLGEMEEL 171
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ + LI A G G +E A + L M + G +P + ++ CVR+ L A
Sbjct: 29 LRPSVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQ 88
Query: 604 SLFEEMKH----YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+LF ++ +QP V++ ++ A Y +V++ + +M +AG K +
Sbjct: 89 TLFSSLRGAGLCISLQPTGVSFNIMVNA---YARRRKVEKAFKMLLEMRRAGCKPDQITY 145
Query: 660 KELIE 664
L++
Sbjct: 146 TTLVK 150
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 55/367 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + A ++ E ++ KG+ + DV
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE---MDNKGI-RPDV 293
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-LVE------- 415
FTYS+++ + W A ++ DM+ + PN +T+S+LI+A G LVE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 416 ---------------------------QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+A H+FE M+ C PN + L++ +A +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDK 507
+ LFR +S+ + GNT + + H Q+ + V S
Sbjct: 414 VEEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---- 461
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYNIL+ C + KA++ ++ + P+ ++ I+I+ +G VE
Sbjct: 462 -VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ + G+SP+V+AY T I R ++A SL ++MK PN TY TL+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 626 RARSRYG 632
RAR R G
Sbjct: 581 RARLRDG 587
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 186/418 (44%), Gaps = 35/418 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I FN L++ A KF L + + MQ LG+
Sbjct: 66 DAVDLFGDMVKSRPFP----------SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +Y+I + C LA + ++ L + D+ T S+++ + +K
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLSSLLNGYCHSKRISD 171
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T T+++LI+ +A+ L ++M+Q GC+P+ ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + +H D + N
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLCKYKHMD-----DALNL----- 280
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TY+ L+ +C +Y R L+++M ++PN ++++ LIDA
Sbjct: 281 FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
VTY TL++ + V++ + ++++M + G N LI + + D Q
Sbjct: 399 VTYSTLIKG---FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 68/402 (16%)
Query: 220 ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
AD++ N + K + + AL + P+++ ++I G + + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
D+ + + N+ F++L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ E KH+ + K +V TYST++K F AK + +++ +M G
Sbjct: 376 -------HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ NT+T+++LI+ A + A +F++M+ G PN NILL + + +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+F + +R + +P
Sbjct: 489 VVFE-----------------------------------------------YLQRSTMEP 501
Query: 514 TTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYNI+++ C D + L + G+SPN I++ +I G+ E A
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWE---LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+LK M+EDG P+ Y T I+ +R + + L +EM+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 61/337 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 381
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +Y+ L+K C A E++ E+ G + TY+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYT 437
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T++ L++ G + +AM +FE + ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF + +L
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS---------------------- 535
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
P YN ++ C + +A L+ +M+ G
Sbjct: 536 -------------------------PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
PN ++ LI A G+ E + +++K MR G + D
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 154/375 (41%), Gaps = 65/375 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD------ 362
L V+ N+Q +G + S+ L + C + A Y E+ ++K+D
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71
Query: 363 -----------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ ++ A +++ + + E M + G++ + T+S IN
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+ + +M++ G EP+ + LL + + A VAL
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA-------------VAL--- 175
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D++ M +K P++ F+F TT + + + ++
Sbjct: 176 ----VDQMVEMGYK------------PDT--------FTF--TTLIHGLFLHNKASE--- 206
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL+++M G P+ +++ +++ G+++ AL +LK M + + DVV Y T I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ K + A +LF EM + I+P++ TY +L+ YG + + L+ DM +
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS---DMIERK 323
Query: 652 YKANDTYLKELIEEW 666
N LI+ +
Sbjct: 324 INPNVVTFSALIDAF 338
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 164/397 (41%), Gaps = 90/397 (22%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY NM+K GV ++ +YN+L++A C A+++ E+ KG DV TY+TIV
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMAR---KGCPPDDV-TYATIV 201
Query: 371 KVF----------------------------ADAKWWQM--ALKVKEDMLSAGVTPNTIT 400
V A + ++M V DM+ G+ PN IT
Sbjct: 202 SVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 261
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++++A AG + A + M+ GC PN L++ + + A ++R W
Sbjct: 262 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR-WM 320
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+++ + P+T +YNI
Sbjct: 321 VAE----------------------------------------------GWAPSTVSYNI 334
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L++ C+ D +++N M G PN +++ LID +G++ GA+ I M G
Sbjct: 335 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
P+VV YT + V + QA SL ++M PN VT+ TL+R+ V
Sbjct: 395 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC---DCRRVG 451
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
+ L V+ +M + G N ELI G+ ++ N
Sbjct: 452 RALGVFHEMRRHGCVPNGRTYNELI----HGLFREGN 484
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 172/423 (40%), Gaps = 59/423 (13%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADM 324
CG+ M + Y+++R V N++ +N L+ + + ++ M + G D
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 325 ASYNILLKACC-----------LAGNTVLA----------------QEIYGEVKHLEAKG 357
+Y ++ C LA +A QE++ V + +G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +V TY+TIV F A +MA + M+ G TPN +T+++L+ + G V A
Sbjct: 255 -LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA------------FRLFRSWTLSKTQ 465
+ ++ M+ G P++ NIL++ A F R+++
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Query: 466 VALGEDYDGNTDRISNMEHKD-KQSITNTPNFVP--------NSHYSSFDKRF--SFKPT 514
+ D G ++M K ++ N V N S DK + P
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T T+N L+++ C D RV + +EMR G PN ++ LI GN AL ++
Sbjct: 434 TVTFNTLIRSLC-DCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ G+ +V Y T + +++ ++A +M IQPN T+ ++ A +
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552
Query: 632 GSL 634
G +
Sbjct: 553 GEV 555
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 26/384 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFT 308
PN+ TI+D G+ + AI + T N+ F +L+ + HD
Sbjct: 257 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD---A 313
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ M G SYNIL++ C G+ A I + +E G +V TYST
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI---LNSMEQHGCFP-NVRTYST 369
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F+ A A+ + DM +G PN + ++++++ + QA L ++ML
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ N L+++ + + RA +F V G Y+ +
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC-VPNGRTYN-----------ELIH 477
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ N H + + + + TYN ++ C +A+ + +M G+ P
Sbjct: 478 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +I A G V A +L M +++ YT + +L A +
Sbjct: 538 NAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYL 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSR 630
+M + I PN VT+ L+R R
Sbjct: 598 LKMLYEGIYPNTVTWNVLVRGVFR 621
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++DV C M +++++ +
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV--FCKKLMFNQAKSLIDK 424
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ + + L V+ M++ G + + +YN L+ GN
Sbjct: 425 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 484
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + V +++ G+ +L + TY+T+V + + A+ M+ G+ PN
Sbjct: 485 CGDALHM---VTEMQSHGI-ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 540
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S++I+A G V A + M C N IL+ E C D+
Sbjct: 541 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM---AELCNQDK 589
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L + MQ G+ + +YN ++ C
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC---Q 516
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T +++E V + +G+ + + FT+S I+ + +MA + M N +
Sbjct: 517 TRMSREAMVFVGKMIVQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ------ACVEACQF 449
++ L+ N + AM +ML G PN+ N+L++ C+E F
Sbjct: 576 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDF 631
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C G V + + MR+DG+ P+V Y ++ ++ R+ A + +EM P+
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
VTY T++ + L E + LA + A Y A
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLAAMPPV-AASYNA 229
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 226/511 (44%), Gaps = 35/511 (6%)
Query: 128 RIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLP 187
++D + + ++L G+ P D + +K C++ G + + + +EE +
Sbjct: 199 KVDMAIAIYRQLKAFGLNP---NDYTYTIAIKGFCRK----GNLAEAIDVFRDMEESGVT 251
Query: 188 VKELDEEFRIVQLCVN-KPDVNLAIRYACI---VPRADILFCNFVREFGKKRDLVSALRA 243
I LC++ + D+ + I +P + +R F + L A
Sbjct: 252 PNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESI 311
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
+K +P++Y+ +I + G+ +K+ A+++++ S+ V N + +S++
Sbjct: 312 LREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQ-GLS 370
Query: 304 DLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ EV +K +K+G+ D A YN+++ A C G A E+ E+K K ++
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMK---GKKMVP 427
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ Y+T++ + AL + +M G P+ +T++ L + GL ++A+ L
Sbjct: 428 -DIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M G +P++ N++++ + D A F + + E+Y +
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-----EEKCLENYSAMVNGYC 541
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEM 539
H +K + S K+ SF + +L C D + L+ M
Sbjct: 542 EANHVNKAFAL----LIRLSKQGRILKKASF------FKLLGNLCSEGDSEKALCLLETM 591
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ ++P I ++ +I A +G +E A + ++ + G++PDV+ YT I R ++
Sbjct: 592 VALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKM 651
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
K+A+ + +MK+ I+P+++TY LL S+
Sbjct: 652 KEAWHVLGDMKNRGIEPDVITYTVLLNNCSK 682
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 159/391 (40%), Gaps = 63/391 (16%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
AIY L++ + N Y + + +L ++V+++M++ GV + SY ++
Sbjct: 205 AIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGL 264
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
CL G + L ++ +V + AK + +DVF Y+ +++ F + A + +M G
Sbjct: 265 CLHGRSDLGFKVLQDV--INAK--IPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGF 320
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + +LI+ G + +A+ L +EM+ G + N + +LQ
Sbjct: 321 APDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQG------------ 368
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LS+ G ++N + F K+
Sbjct: 369 ------LSQM---------GMASEVAN-------------------QFKEF-KKMGIFFD 393
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
YN++M A C L+ EM+ + P+ I++T +I G V AL I +
Sbjct: 394 EACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYR 453
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ G PD+V Y R+ ++A SL M+ ++P+ VT+ ++ G
Sbjct: 454 EMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGG 513
Query: 633 SLHEVQ--------QCLAVYQDMWKAGYKAN 655
+ + Q +CL Y M +AN
Sbjct: 514 KVDDAQAFFDNLEEKCLENYSAMVNGYCEAN 544
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 150/384 (39%), Gaps = 56/384 (14%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C +G A ++ + KH + + + ++ +++ MA+ + +
Sbjct: 155 LIKVCVASGMFDQAFDVLLQTKHCG----FAPQILSCNFLMNRLVESRKVDMAIAIYRQL 210
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN T++ I G + +A+ +F +M ++G PNS ++ +
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D F++ + +K + + S M+ K+ +SI ++
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM------------EKQ 318
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI------------------ 549
F P Y L+ C + + AL +EM + G+ N +
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378
Query: 550 -----------------SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +++DA G VE A+++L M+ M PD++ YTT I
Sbjct: 379 ANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISG 438
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ A +++ EMK +P++VTY L SR G Q+ L++ M G
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGL---TQEALSLLNYMETQGV 495
Query: 653 KANDTYLKELIEEWCEGVIQDKNQ 676
K + +IE C G D Q
Sbjct: 496 KPDTVTHNMIIEGLCIGGKVDDAQ 519
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 99/264 (37%), Gaps = 52/264 (19%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+LI C +G+ +QA + + G P CN L+ VE+ + D A ++R
Sbjct: 154 ALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQL--- 210
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K F P TY I +
Sbjct: 211 --------------------------------------------KAFGLNPNDYTYTIAI 226
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
K C +A+ +M G++PN S+T I+ G + ++L+ + +
Sbjct: 227 KGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIP 286
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DV AYT I+ +LK+A S+ EM+ P++ Y L+ G+L +
Sbjct: 287 MDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL---LKA 343
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
LA++ +M G K N L +++
Sbjct: 344 LALHDEMVSKGVKTNCVILSSILQ 367
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 162/413 (39%), Gaps = 99/413 (23%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ T+I + G + + IY +++ +I +N L + + + L +
Sbjct: 427 PDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI------------------YGEVKHL 353
M+ GV D ++N++++ C+ G AQ Y E H+
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHV 546
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQM------------ALKVKEDMLSAGVTPNTITW 401
L + + I+K A ++++ AL + E M++ + P I +
Sbjct: 547 NKAFALLIRLSKQGRILK---KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMY 603
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S +I A AG +E+A ++F ++ G P+ I++ + R ++ +W +
Sbjct: 604 SKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING------YCRMNKMKEAWHV 657
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ +M+++ +P TY +L
Sbjct: 658 -----------------LGDMKNR------------------------GIEPDVITYTVL 676
Query: 522 MKACCT----------DYYRVK-------ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ C D + K AL +EM+ + + P+ I +T+LID + N+
Sbjct: 677 LNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNI 736
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A+ + M + G++PD V YT + +K+A LF+EM + I+P+
Sbjct: 737 QDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPD 789
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P M + +I G+ K++ ++ L + + ++ + ++N + +K
Sbjct: 597 NPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWH 656
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEVKHLEA 355
V +M+ G+ D+ +Y +LL C N + ++ E+K ++
Sbjct: 657 VLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMD- 715
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+K DV Y+ ++ Q A+ + +M+ G+ P+T+T+++L++ N G ++
Sbjct: 716 ---IKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIK 772
Query: 416 QAMHLFEEMLQAGCEPNSQCCNIL 439
+A+ LF+EML G P++ ++L
Sbjct: 773 KAVVLFDEMLNKGIRPDAHTMSVL 796
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 57/354 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M++LG D +Y+++L A G ++ +++ + + KG K TY+TI
Sbjct: 90 ELFSEMKRLGCDPDEFTYHLILDA---MGKSMRIEDMLKIQEEMHNKGY-KSTYVTYNTI 145
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +K A+ + ++S G +P T+ L++ G +E A LF+EML+ GC
Sbjct: 146 ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGC 205
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EPN NILL A ++ LF S +Q
Sbjct: 206 EPNCAIYNILLNGYRIAGDTEKVCELFESMV--------------------------EQG 239
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ P +Y +++ C D L ++ +GL P+
Sbjct: 240 MN---------------------PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 278
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +LI G SG +E AL + M + G++P++ Y + I ++ + +A ++E
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 338
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLK 660
E+ +PN+ TY L+R S GS + A Y M G + N TY++
Sbjct: 339 ELLAKGWKPNVFTYNALIRGYSVSGS---PENAFAAYGRMIVGGCRPNSSTYMQ 389
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 64/352 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 55 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 108
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 109 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 168
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 169 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 193
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 194 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 239
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 240 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 299
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G+K N
Sbjct: 300 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKGWKPN 348
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN I +++ I GD K ++E + Q + +I + +++ D L L
Sbjct: 207 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 266
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 267 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 322
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 323 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 382
Query: 432 NS 433
NS
Sbjct: 383 NS 384
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 188 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 247
Query: 328 NILLKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+++ C G N L+ K L G L+ D+ TY+ ++ + + AL +
Sbjct: 248 TVVIDTLCADGRLNDGLSY-----FKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSL 301
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++
Sbjct: 302 YNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSV 361
Query: 446 ACQFDRAFRLF 456
+ + AF +
Sbjct: 362 SGSPENAFAAY 372
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 241 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 300
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 301 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 357 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 392
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 211/526 (40%), Gaps = 78/526 (14%)
Query: 210 AIRYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDA-SKKHLS-SPNMYICRTIIDVC 266
A+ C R D++ + V K + ALR D S++ L P++ T++D
Sbjct: 160 ALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD-- 217
Query: 267 GIC--GDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
G+C G ++ A E S N +N L++ ++ E+ + M+ GV
Sbjct: 218 GLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV 277
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ + N ++ C AG T A E + E + + +G K + TYST+V
Sbjct: 278 PQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNNVG 335
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA+++ + +S G +P+ I + ++I+ AG +E A + M +AG + +++ NIL+
Sbjct: 336 MAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
F R RL ++ L +
Sbjct: 396 AG------FCRKKRLHEAYELLQEM----------------------------------- 414
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
K +P TYN L+ C D+ V L+ +M G P+ I++ L+
Sbjct: 415 ------KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ AL+IL+ M E G+ P+ V Y T I + + A LF+EMK + N+
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ-- 676
T+ LL+ + + + D + D +++ EW VI + ++
Sbjct: 529 TTFNALLKGLRDKNMPEKAFELM----DQMREERCFPDYVTVDVLMEWLP-VIGETDRLK 583
Query: 677 ---NQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGL 719
QGE T +R S R + H AE + R L
Sbjct: 584 RFMQQGEHTASKRIVSDRTSAYF------HFATGLAETFTLHKRTL 623
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 175/434 (40%), Gaps = 42/434 (9%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEI 346
+++ FNS++ A D+ +Y MQ V D+ +Y IL+ C AG A +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA--GVTPNTITWSSL 404
+ + ++ DV T +T+V + Q AL E +S+ G PNT+T++ L
Sbjct: 195 LDGMSRQDLD--IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----WT 460
I+A G + A L E+M G N N ++ A + A FR W
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312
Query: 461 LSKTQVALGEDYDGNTDRISN----ME-HKDKQSITNTPNFV----------------PN 499
K G +N ME +K S ++P+ +
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S K FK T YNIL+ C + L+ EM+ VG+ P+ ++ L+
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+ ++L M +DG P V+ + T + + ++ +A + M I PN
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
V Y TL+ + G +V + ++ +M + AN T L++ ++DKN
Sbjct: 493 NVIYNTLIDFLCKRG---DVDLAIELFDEMKEKSVPANVTTFNALLKG-----LRDKNMP 544
Query: 678 QGEVTLCRRTNSQR 691
+ L + +R
Sbjct: 545 EKAFELMDQMREER 558
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ + M+K G AD+ Y L+ C GN +E++ E + KG+ +V TYS
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDE---MLGKGI-SANVVTYSC 289
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V W+ A V M G+ P+ +T++ LI+ G AM L M++ G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP++ N+LL C E D AF++ R + G+ D T DK
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVID-AFKILR------MMIEKGKKADVVTYNTLMKGLCDK 402
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ S FD +P T+N+L+ C + KA + +M G
Sbjct: 403 GKVDEALKLF----NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 458
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++ +L+ C +G ++ A+++ K + + G P+ Y+ I + + L A L
Sbjct: 459 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
F EM+ + + P L Y TL+ + + GSL +Q +++Q+M A
Sbjct: 519 FCEMRTHGLNPALFDYNTLMASLCKEGSL---EQAKSLFQEMGNA 560
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 172/416 (41%), Gaps = 41/416 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ C ++D +Y + ++Y + +V + ++L+ +A + V
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ K G ++ NI+LK C G E G ++ + K V D+ +Y+T++
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVF---EAMGLIREMGRKSV-SPDIVSYNTLIN 187
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK + A+ + +M +AG PN++T ++L++ G +++AM L E M + G +
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH------- 484
+ L+ DR LF LG+ N S + H
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEM--------LGKGISANVVTYSCLVHGLCRLGQ 299
Query: 485 -KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K+ ++ N P TY L+ C D A L+N M
Sbjct: 300 WKEANTVLNAM------------AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVE 347
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+++++ +L+ G V A +IL++M E G DVV Y T +K ++ +
Sbjct: 348 KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 407
Query: 602 AFSLFEEMKHYQ--IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A LF M + ++PN+ T+ L+ + G L + + +++ M K G N
Sbjct: 408 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL---TKAVKIHRKMVKKGSCGN 460
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 186/444 (41%), Gaps = 44/444 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN C T++D G+C D A + E ++ + ++ ++ +L++ N +L
Sbjct: 212 PNSVTCTTLMD--GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M G+ A++ +Y+ L+ C G A + + A+ + DV TY+ +
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----AEHGIHPDVVTYTGL 325
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + M+ G P+ +T++ L++ GLV A + M++ G
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDRI 479
+ + N L++ + + D A +LF S + + G +G +
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 445
Query: 480 SNMEHK--DKQSITN--TPNFVPNSHYSSFDKR-----------FSFKPTTTTYNILMKA 524
+ K K S N T N + + + F P + TY+IL+
Sbjct: 446 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505
Query: 525 CCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L EMRT GL+P + L+ + G++E A + + M PD
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++++ T I +++ + L +M ++P+ +T+ TL+ S+ G L E + L
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL- 624
Query: 643 VYQDMWKAGYKAN----DTYLKEL 662
+ M +G+ + D+ LK L
Sbjct: 625 --ERMVASGFTPDALVYDSLLKGL 646
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 159/402 (39%), Gaps = 63/402 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSL 297
+A +H P++ +ID G+C D + A + + NVT N+ +
Sbjct: 308 NAMAEHGIHPDVVTYTGLID--GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365
Query: 298 MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D ++ + M + G AD+ +YN L+K C G A +++ + + +
Sbjct: 366 KEGLVID---AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM--FDNEN 420
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +VFT++ ++ A+K+ M+ G N +T++ L+ C AG +++A
Sbjct: 421 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 480
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
M L++++L G PNS +IL+ + + A LF
Sbjct: 481 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM------------------ 522
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ P YN LM + C + + K+L
Sbjct: 523 -----------------------------RTHGLNPALFDYNTLMASLCKEGSLEQAKSL 553
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM P+ IS+ +ID +G+ + ++ M E G+ PD + ++T I +
Sbjct: 554 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 613
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
L +A S E M P+ + Y +LL+ S G E+
Sbjct: 614 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 58/379 (15%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
++ ++L + L F+ VY+ M + V+ S + L++ C A + Q +G V
Sbjct: 79 FLVDALARSRNYGLAFS--VYRRMTHVDVLPSFGSLSALIE--CFA-DAQKPQLGFGVVG 133
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G ++VF + ++K A+ + +M V+P+ +++++LIN A
Sbjct: 134 LVLKRG-FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKA 192
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+++A+ L EM AGC PNS C L+ + + D A L +
Sbjct: 193 KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM------------ 240
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
K+ F Y L+ C +
Sbjct: 241 -----------------------------------KKKGFDADVVLYGTLISGFCNNGNL 265
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
R K L +EM G+S N ++++ L+ G + A +L M E G+ PDVV YT
Sbjct: 266 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + R A L M +P+ VTY LL + G V + + M +
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL---VIDAFKILRMMIE 382
Query: 650 AGYKANDTYLKELIEEWCE 668
G KA+ L++ C+
Sbjct: 383 KGKKADVVTYNTLMKGLCD 401
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G + N I++ +G V A+ +++ M +SPD+V+Y T I ++K+LK+A
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L EM+ PN VT TL+ + G + E + L + M K G+ A+ L
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL---EAMKKKGFDADVVLYGTL 255
Query: 663 IEEWCEGVIQDKNQ 676
I +C D+ +
Sbjct: 256 ISGFCNNGNLDRGK 269
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + +ID G C M ++ ++ ++R+ + ++ +N+LM L+
Sbjct: 494 PNSFTYSILID--GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M D+ S+N ++ AG+ +E+ ++K +E L+ D T+ST+
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMG--LRPDALTFSTL 607
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A E M+++G TP+ + + SL+ ++ G + ++L +M G
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 369 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 483
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 526
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 152/390 (38%), Gaps = 93/390 (23%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +G AD+ +++ +++ C G A + V + KG + V TY +++
Sbjct: 236 MLLMGCAADVNTFDDVVRGMCGLGRVREAARL---VDRMMTKGCMP-GVMTYGFLLQGLC 291
Query: 375 DAKWWQMALKVKEDMLSAGVTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + E G P N + ++++I C G + +A L+E M GC+P+
Sbjct: 292 RVR------QADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPD 345
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ +IL+ + + A RL R ME K
Sbjct: 346 AHTYSILMHGLCKLGRIGSAVRLLR-----------------------EMEKK------- 375
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
F P TY I++ + C + + +AL+ EM GL+ N
Sbjct: 376 -----------------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +I A G ++ A+ +++ MR G +PD+ +Y T I ++++++A +FE +
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478
Query: 611 HYQIQPNLVTYITLLRARSRYGS------------LH--------------------EVQ 638
+ N +TY T++ A R G LH V
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + ++M + G K N+ LI E C+
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCK 568
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 480
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 481 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 571
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 142/338 (42%), Gaps = 64/338 (18%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ + ++ + + L+ + N + + D + LE M G+ + YN ++
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWD----DTRALLE---EMSAKGLTLNSQGYNGMIY 424
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C G E G ++ + ++G D+ +Y+TI+ + + + A + E++L
Sbjct: 425 ALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N IT++++I+A G + A+ L +EM+ GC + N L++A +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK------- 533
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
DGN DR + +E ++ I
Sbjct: 534 --------------------DGNVDRSLVLLEEMAEKGI--------------------- 552
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP +YNIL+ C + RV+ L +M GL+P+ +++ LI+ G + AL
Sbjct: 553 KPNNVSYNILISELCKE-RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+L+ + + + PD++ Y I + + L A L
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 175/452 (38%), Gaps = 50/452 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+ + ++ LR +H P+ + +T+I G ++ + ++ +
Sbjct: 188 LGRADEALALLRGM---ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ F+ ++ ++ + M G M + +Y LL+ C A+ + G
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 304
Query: 349 EVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V +L+V ++T++ A+ K + A ++ E M G P+ T+S L++
Sbjct: 305 RVP--------ELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHTYSILMHG 355
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLS 462
G + A+ L EM + G PN I+L + + +D L + TL+
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415
Query: 463 KTQVALGEDY----DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+Q G Y DG D + + + N P +Y
Sbjct: 416 -SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN--------------------PDICSY 454
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C + +A + + G+ N I++ +I A G + A+++ K M
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G S DVV+Y IK + + ++ L EEM I+PN V+Y L+ S
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI---SELCKERR 571
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ L + + M G + LI C+
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 129/379 (34%), Gaps = 67/379 (17%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV SYN++L A A +Y + H + + FT+ +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVH---RDRVPPTTFTFGVAARALCR 187
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + M G P+ + + ++I+A + G V +A L EM
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM----------- 236
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
+L+ + FD R LG R+ + +T
Sbjct: 237 --LLMGCAADVNTFDDVVR---------GMCGLG--------RVREAARLVDRMMTK--- 274
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTI 553
P TY L++ C RV+ +G P N + +
Sbjct: 275 --------------GCMPGVMTYGFLLQGLC----RVRQADEARAMLGRVPELNVVLFNT 316
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I C G + A ++ + M G PD Y+ + + R+ A L EM+
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG 376
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE----- 668
PN+VTY +L + + G + + A+ ++M G N +I C+
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTR---ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433
Query: 669 ---GVIQDKNQNQGEVTLC 684
G+IQ+ +C
Sbjct: 434 EAMGLIQEMRSQGCNPDIC 452
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 178/419 (42%), Gaps = 26/419 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
S P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C +G E Y E+K + LK +V +YST+
Sbjct: 189 YFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMK----QSGLKPNVVSYSTL 244
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G PN T++SL++A G + A L EML+ G
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A +LF + L Y+ ++ D+
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS-YNALIHGFVKAKNMDRAL 363
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ N K +P Y + C K +MNEM+ G+
Sbjct: 364 ELLNEL------------KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKA 411
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L+ M+E VV + I ++K + +A F
Sbjct: 412 NTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYF 471
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
M + + +QPN Y ++ + ++V+ +++ M + G + T L++
Sbjct: 472 GRMSNDFGLQPNAAVYTAMIDGLCKE---NQVKAATTLFEQMAQEGLVPDRTAYTSLMD 527
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 190/437 (43%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++S + ++
Sbjct: 145 KEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N + L LE Y+ M++ G+ ++ SY+ L+ A C A + Y ++
Sbjct: 205 TYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDM 264
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G + + FTY+++V A ++ +ML GV N +T+++LI+ +
Sbjct: 265 RRV---GHVP-NEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M+ AG PN N L+ V+A DRA L
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLL 380
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + + + + + N H +
Sbjct: 381 YGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQ 440
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMR---TVGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ R GL PN +T +ID V
Sbjct: 441 ELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQV 500
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + + M ++G+ PD AYT+ + ++ + +A +L ++M ++ +L+ Y +L
Sbjct: 501 KAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSL 560
Query: 625 LRARSRYGSLHEVQQCL 641
+ S+ L + + L
Sbjct: 561 VWGFSQCNQLQKARSFL 577
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 202/474 (42%), Gaps = 60/474 (12%)
Query: 202 VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRT 261
+N+ N I CIV A ILFC A YDA+ I R
Sbjct: 1 MNRNGFNHTIESYCIV--AHILFC--------------ARMYYDANS---------ILRE 35
Query: 262 IIDVCGICGDYMKSRAIYEDLRS-QNVTLNIY-VFNSLMNV--NAHDLKFTLEVYKNMQK 317
I+ + ++ ++++L S +NV + + VF++L +V + L+ + + M++
Sbjct: 36 IV----LSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKR 91
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
V S N LL G T + + K + G K VFTY+ ++
Sbjct: 92 FRVFPKTRSCNGLLHKFAKLGKTDGVKRFF---KDMIGAGS-KPTVFTYNIMIDCMWKEG 147
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A + E+M G+ P+T+T++S+I+ G ++ ++ FEEM CEP+ N
Sbjct: 148 DIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYN 207
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
L+ ++ + + +R S + + Y D E +Q+I +
Sbjct: 208 SLINCFCKSGKLPKGLEFYREMKQSGLKPNV-VSYSTLVDAFCK-EDMMQQAIKFYVDM- 264
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWT 552
+R P TY L+ A C +D +R L NEM VG+ N +++T
Sbjct: 265 ---------RRVGHVPNEFTYTSLVDANCKIGNLSDAFR---LANEMLEVGVEWNVVTYT 312
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID + ++ A ++ M G+ P++ +Y I V++K + +A L E+K
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
IQP+L+ Y T + L +++ V +M + G KAN L++ +
Sbjct: 373 GIQPDLLLYGTFIWGLC---GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 180/421 (42%), Gaps = 56/421 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V F K+ + A++ Y ++ PN + +++D G+ + + +
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V N+ + +L++ +A +K +++ M GV+ ++ASYN L+ A N
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+ E+K +G+ + D+ Y T + + + A V +M G+ NT+
Sbjct: 359 MDRALELLNELK---GRGI-QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++L++A +G + +HL EEM + E +L+ L ++
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDG------------LCKNK 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+SK DY G R+SN F +P Y
Sbjct: 463 LVSKAI-----DYFG---RMSN--------------------------DFGLQPNAAVYT 488
Query: 520 ILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + +VKA L +M GL P+ ++T L+D GN+ AL + M E
Sbjct: 489 AMIDGLCKE-NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE 547
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
GM D++AYT+ + + +L++A S EEM +I P+ V I +L+ G + E
Sbjct: 548 IGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDE 607
Query: 637 V 637
Sbjct: 608 A 608
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 52/275 (18%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + +L + + G++E+A F +M + P ++ CN LL + + D R
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F K + G KPT
Sbjct: 121 F------KDMIGAGS-----------------------------------------KPTV 133
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYNI++ D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 134 FTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+ PDV+ Y + I +S +L + + EMK ++PN+V+Y TL+ A +
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ QQ + Y DM + G+ N+ L++ C+
Sbjct: 254 M---QQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 261 TIIDVC----GICGDYMKSRAI-YEDLRSQNVTL--NIYVFNSLMN--VNAHDLKFTLEV 311
T++ C G+C + + S+AI Y S + L N V+ ++++ + +K +
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G++ D +Y L+ GN + A + ++ + +KLD+ Y+++V
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG----MKLDLLAYTSLVW 562
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
F+ Q A E+M+ + P+ + ++ G +++A+ L
Sbjct: 563 GFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 38/427 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ TIID G+C RA + + + + V ++ +N++++ A +
Sbjct: 267 PDVVTYNTIID--GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V ++M V D+ +YN L+ G +E+ ++ + A+G L DV TYS +
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW---KEVVRRLEEMYARG-LDPDVVTYSLL 380
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ M+ G+ PN + L++ A G + L + M+ G
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEH 484
PN+ NI+L A + D A +F + LS V G D R+ +
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 485 KDKQSITN--TPN-FVPNS---------HYSSFDKRF------SFKPTTTTYNILMKACC 526
K Q I + TPN V NS + ++ F +P +N +M C
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + A L++ M VG+ PN IS+ LI +G + A Q+L +M G+ PD++
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T ++ ++ R+ A+ LF EM + P VTY T+L+ E ++ +Y
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE---LY 677
Query: 645 QDMWKAG 651
+M K+G
Sbjct: 678 LNMIKSG 684
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 196/445 (44%), Gaps = 45/445 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI------YEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ C T++ G+C + A+ ED N T N+ +N++++ A +
Sbjct: 159 PNVVSCNTLLK--GLCNEKRVEEALELLHTMAED-GGGNCTPNVVTYNTIIDGLCKAQAV 215
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
V ++M GV D+ +Y+ ++ C A A+ G ++H+ KGV K DV T
Sbjct: 216 DRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE---GVLQHMIDKGV-KPDVVT 271
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+TI+ A+ A V + M+ GV P+ +T++++I+ A V++A + + M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+P+ Q N L+ + ++ R + A G D D T + +++
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL------EEMYARGLDPDVVTYSLL-LDYL 384
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVG 543
K + Y K KP T Y IL+ A + L++ M G
Sbjct: 385 CKNGKCTEARKI---FYCMIRK--GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+SPN+ + I++ A ++ A+ I M + G+SPDVV Y I + R+ A
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYG--SLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
F +M + + PN V + +L+ YG ++ ++ ++ +MW G + N +
Sbjct: 500 LKFNQMINDGVTPNSVVFNSLV-----YGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554
Query: 662 LIEEWCEGVIQDKNQNQGEVTLCRR 686
++ C N+G+V + +R
Sbjct: 555 IMCNLC---------NEGQVMVAQR 570
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 181/434 (41%), Gaps = 44/434 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ TIID G+C RA + + + ++V +I +N L++ ++ + K +
Sbjct: 302 PDVVTYNTIID--GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D+ +Y++LL C G A++I+ + + +K +V Y +
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIF----YCMIRKGIKPNVTIYGIL 415
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + + M++ G++PN ++ ++ A A ++++AMH+F M Q G
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEH 484
P+ IL+ A + + D A F ++ V G DR E
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535
Query: 485 K-----DKQSITNTPNF--------------VPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
D+ N F V S + R +P +YN L+
Sbjct: 536 LFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME-RVGVRPNVISYNTLIGGH 594
Query: 526 C----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C TD L++ M +VGL P+ IS+ L+ +G ++ A + + M G++P
Sbjct: 595 CLAGRTD--EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTP 652
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V Y+T ++ ++R +A L+ M Q ++ TY +L + V +
Sbjct: 653 GAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNC---VDEAF 709
Query: 642 AVYQDMWKAGYKAN 655
++Q + + N
Sbjct: 710 KIFQSLCSKDLRPN 723
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 170/421 (40%), Gaps = 55/421 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ + +H SP++ +ID G + + + + VT N
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
VFNSL+ + E++ M GV ++ +N ++ C G ++AQ +
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL-- 571
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E GV + +V +Y+T++ A A ++ + M+S G+ P+ I++ +L+
Sbjct: 572 -IDSMERVGV-RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGY 629
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G ++ A LF EML+ G P + + +LQ +F A L+ + S
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS------ 683
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+ +D TYNI++ C
Sbjct: 684 GQQWD-----------------------------------------IYTYNIILNGLCKT 702
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A + + + L PN I++TI+ID G + A+ + + G+ P+VV Y
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+K ++ L + +LF M+ P+ V ++R+ G + L+ +
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDE 822
Query: 647 M 647
M
Sbjct: 823 M 823
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 158/395 (40%), Gaps = 45/395 (11%)
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ N Y+FN ++ A + + ++ M + G+ D+ +Y IL+ A C G
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV- 495
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+ + + GV V ++++V W+ A ++ +M GV PN + +
Sbjct: 496 --DDAVLKFNQMINDGVTPNSV-VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
++++ N G V A L + M + G PN N L+ A + D A +L
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMV- 611
Query: 462 SKTQVALGED---YDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFS 510
V L D YD T RI N Y F + R
Sbjct: 612 ---SVGLKPDLISYDTLLRGYCKTGRIDNA-------------------YCLFREMLRKG 649
Query: 511 FKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+ +++ + K L M G + ++ I+++ + V+ A
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+I + + + P+++ +T I V + R K A LF + + + PN+VTY +++
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G L E ++ M K+G + L +I
Sbjct: 770 IQEGLLDEFDN---LFLAMEKSGCTPDSVMLNAII 801
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 163/411 (39%), Gaps = 34/411 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH-----DLKFTLEVYKNMQKL---GVMADMASYNI 329
++++L ++ FN L+NV A + + ++ M + V D+ +Y+I
Sbjct: 36 LFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSI 95
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK-ED 388
L C G +G L K +++ + ++ DAK A+ +
Sbjct: 96 LTGCFCRLGRIEHGFAAFG----LILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG---CEPNSQCCNILLQACVE 445
M G PN ++ ++L+ N VE+A+ L M + G C PN N ++ +
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A DRA + + ++ + Y D + + D+
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDV-VTYSTIIDGLCKAQAVDRAE---------GVLQHMI 261
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
DK KP TYN ++ C R + ++ M G+ P+ +++ +ID +
Sbjct: 262 DK--GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ A +L+ M + + PD+ Y I + + K+ EEM + P++VTY
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW-CEGVIQD 673
LL + G E ++ ++ M + G K N T L+ + G I D
Sbjct: 380 LLDYLCKNGKCTEARK---IFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVGLSPNHISWTILIDACGGSGN 563
F P + N L+K C + +AL M E +PN +++ +ID +
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ A +L+ M + G+ DVV Y+T I +++ + +A + + M ++P++VTY T
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
++ + ++ + V Q M G K + +I+ C+ D+
Sbjct: 275 IIDGLCKAQAVDRAE---GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 322
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 22/365 (6%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F + V M KLG+ D ++N L+ C+ G +
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEI---K 179
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E G + +G + DV +YST++ + MAL++ M G PN + ++++
Sbjct: 180 EAVGLFNEMVRRG-HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM L EM+ G P+ + +L + A LF
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM----- 293
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G + NT + + + K+ + + V + + K+ + +P TYN LM
Sbjct: 294 ---VGRNVMPNTVTFTILVDGLCKEGMVSEARCV----FEAMTKKGA-EPNAYTYNALMD 345
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + +A +++ M G +P S+ ILI+ ++ A +L M E ++P
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y+T ++ + R ++A +LF+EM + P+L+TY TLL ++G L E + L
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465
Query: 642 AVYQD 646
Q+
Sbjct: 466 KSMQE 470
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 190/409 (46%), Gaps = 38/409 (9%)
Query: 294 FNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N ++K + ++ M + G D+ SY+ ++ C +GNT +A ++ ++
Sbjct: 165 FNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQL---LR 221
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E KG K ++ Y+TI+ A+ + +M+ G+ P+ +T+S++++ +
Sbjct: 222 KMEEKGC-KPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSL 280
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKTQ 465
G + +A LF EM+ PN+ IL+ + A +F + T + T
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY 340
Query: 466 VALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF------ 511
AL + Y D + M K + ++ N + N + D+ S
Sbjct: 341 NALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE 400
Query: 512 ---KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P T TY+ LM+ C +AL EM + GL P+ ++++ L+D G+++
Sbjct: 401 KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE 460
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++LK M+E + PD+V Y I+ + +L+ A LF ++ IQP + TY +++
Sbjct: 461 ALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIK 520
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
+ G E + +++ M G+ N +I +G +Q+++
Sbjct: 521 GLLKEGLSDEAYE---LFRKMEDDGFLPNSCSYNVII----QGFLQNQD 562
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +P T+N L+ C + L NEM G P+ IS++ +I+ SGN
Sbjct: 155 KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
ALQ+L+ M E G P++VAYTT I + + A L EM I P++VTY T+L
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
G L+E ++ +M N L++ C EG++ +
Sbjct: 275 HGFCSLGHLNEAT---ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 154/383 (40%), Gaps = 59/383 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P++ TI+ G C G ++ ++ ++ +NV N F L++ + +
Sbjct: 265 PDVVTYSTILH--GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V++ M K G + +YN L+ CL AQ++ + + KG + V +Y+ +
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV---LDIMVDKGCAPV-VHSYNIL 378
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + +M +TP+T+T+S+L+ G ++A++LF+EM +G
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ + LL + D A +L +S SK +
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE------------------------ 474
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPN 547
P YNIL++ K L +++ G+ P
Sbjct: 475 -----------------------PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++TI+I G + A ++ + M +DG P+ +Y I+ ++++ A L +
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLID 571
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM + + T+ LL SR
Sbjct: 572 EMVGKRFSADSSTFQMLLDLESR 594
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 118/317 (37%), Gaps = 54/317 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V + + A K + + + M GVT N + + LIN V A+ +
Sbjct: 92 VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLG 151
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M + G +P++ N L+ C+E + A LF
Sbjct: 152 KMFKLGIQPDAITFNTLINGRCIEG-EIKEAVGLFNEMV--------------------- 189
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
R +P +Y+ ++ C AL + +M
Sbjct: 190 --------------------------RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++T +ID+ V A+ +L M + G+ PDVV Y+T + L
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LF EM + PN VT+ L+ + G + E + V++ M K G + N
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR---CVFEAMTKKGAEPNAYTY 340
Query: 660 KELIEEWCEGVIQDKNQ 676
L++ +C D+ Q
Sbjct: 341 NALMDGYCLNNQMDEAQ 357
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 234 KRDLVSALR-AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +VS R ++A K + PN Y ++D + +++ + + + + ++
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N L + M + + D +Y+ L++ C G QE
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR---PQEALNLF 430
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + + G+L D+ TYST++ ALK+ + M + + P+ + ++ LI
Sbjct: 431 KEMCSSGLLP-DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
AG +E A LF ++ G +P + I+++ ++ D A+ LFR
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Query: 492 NTPNFVPNSHYSSFDKRFSF--------KPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
N F+ N+ S D SF +P+ + + + Y V +L N+M
Sbjct: 61 NNGGFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDL 120
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++ N S ILI+ +V A+ +L M + G+ PD + + T I +K+
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LF EM QP++++Y T++ + G+ L + + M + G K N
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGN---TSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 662 LIEEWCEGVI 671
+I+ C+ +
Sbjct: 238 IIDSLCKDTL 247
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 293 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 352
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 353 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 408
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 409 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 467
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 510
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 152/390 (38%), Gaps = 93/390 (23%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +G AD+ +++ +++ C G A + V + KG + V TY +++
Sbjct: 220 MLLMGCAADVNTFDDVVRGMCGLGRVREAARL---VDRMMTKGCMP-GVMTYGFLLQGLC 275
Query: 375 DAKWWQMALKVKEDMLSAGVTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + E G P N + ++++I C G + +A L+E M GC+P+
Sbjct: 276 RVR------QADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPD 329
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ +IL+ + + A RL R ME K
Sbjct: 330 AHTYSILMHGLCKLGRIGSAVRLLR-----------------------EMEKK------- 359
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
F P TY I++ + C + + +AL+ EM GL+ N
Sbjct: 360 -----------------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 402
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +I A G ++ A+ +++ MR G +PD+ +Y T I ++++++A +FE +
Sbjct: 403 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 462
Query: 611 HYQIQPNLVTYITLLRARSRYGS------------LH--------------------EVQ 638
+ N +TY T++ A R G LH V
Sbjct: 463 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 522
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + ++M + G K N+ LI E C+
Sbjct: 523 RSLVLLEEMAEKGIKPNNVSYNILISELCK 552
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 464
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 465 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 523
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 524 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 555
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 142/338 (42%), Gaps = 64/338 (18%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ + ++ + + L+ + N + + D + LE M G+ + YN ++
Sbjct: 356 MEKKGFAPNVVTYTIVLHSFCKNGMWD----DTRALLE---EMSAKGLTLNSQGYNGMIY 408
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C G E G ++ + ++G D+ +Y+TI+ + + + A + E++L
Sbjct: 409 ALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N IT++++I+A G + A+ L +EM+ GC + N L++A +
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK------- 517
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
DGN DR + +E ++ I
Sbjct: 518 --------------------DGNVDRSLVLLEEMAEKGI--------------------- 536
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP +YNIL+ C + RV+ L +M GL+P+ +++ LI+ G + AL
Sbjct: 537 KPNNVSYNILISELCKE-RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+L+ + + + PD++ Y I + + L A L
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 175/452 (38%), Gaps = 50/452 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+ + ++ LR +H P+ + +T+I G ++ + ++ +
Sbjct: 172 LGRADEALALLRGM---ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 228
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ F+ ++ ++ + M G M + +Y LL+ C A+ + G
Sbjct: 229 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 288
Query: 349 EVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V +L+V ++T++ A+ K + A ++ E M G P+ T+S L++
Sbjct: 289 RVP--------ELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHTYSILMHG 339
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLS 462
G + A+ L EM + G PN I+L + + +D L + TL+
Sbjct: 340 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 399
Query: 463 KTQVALGEDY----DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+Q G Y DG D + + + N P +Y
Sbjct: 400 -SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN--------------------PDICSY 438
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C + +A + + G+ N I++ +I A G + A+++ K M
Sbjct: 439 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G S DVV+Y IK + + ++ L EEM I+PN V+Y L+ S
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI---SELCKERR 555
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ L + + M G + LI C+
Sbjct: 556 VRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 112/305 (36%), Gaps = 37/305 (12%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P T T+ A G ++A+ L M + GC P++ ++ A + A
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 454 RLFRSWTLSKTQVALGEDYDGNT--DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
TL + +G D NT D + M + + V D+ +
Sbjct: 215 ------TLLNEMLLMGCAADVNTFDDVVRGMCGLGR--VREAARLV--------DRMMTK 258
Query: 512 K--PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGA 567
P TY L++ C RV+ +G P N + + +I C G + A
Sbjct: 259 GCMPGVMTYGFLLQGLC----RVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEA 314
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ + M G PD Y+ + + R+ A L EM+ PN+VTY +L +
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE--------GVIQDKNQNQG 679
+ G + + A+ ++M G N +I C+ G+IQ+
Sbjct: 375 FCKNGMWDDTR---ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 431
Query: 680 EVTLC 684
+C
Sbjct: 432 NPDIC 436
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 187/424 (44%), Gaps = 32/424 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + +I G M++ L +V ++Y+FN L++ + ++
Sbjct: 59 SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++NM+ V ++ +YN ++ C +GN A+E+ E+ + G D+ TY+T++
Sbjct: 119 LFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM--IRKGGKSAPDIVTYNTLI 176
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A +E M +AG+ P+ +T + L++ G VE+A+ + + M AG
Sbjct: 177 NAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N ++ A A + A + ++ + S V DG + M + + +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCK--AGMLPRALEVL 294
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC------TDYYRVKALMNEMRTVGL 544
R + P TY IL+ C +Y L+ E+ G
Sbjct: 295 EEMC-------------RENILPDVITYTILVNGLCRVGQVQVAFY----LLEEIVRQGY 337
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++T L+D SG +E A +++K M G VV Y++ + R+ + +A
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ EM + P L TY +L + GS + + +++ D+ GY + LI+
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGS---ISKAVSLISDLVARGYVPDVVTYNTLID 454
Query: 665 EWCE 668
C+
Sbjct: 455 GLCK 458
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 27/388 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLG 319
++D+ G + ++ +Y+DL + N+ F L+ N A LE + + +
Sbjct: 33 LLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFS 92
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ +N+L+ GN A +++ +++E+ V K ++ TY+T++ +
Sbjct: 93 VAPDVYIFNVLIHGLFKDGNPDQAVKLF---ENMESSRV-KPEIVTYNTVISGLCKSGNL 148
Query: 380 QMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A ++ E+M+ G P+ +T+++LINA A + +A E+M AG P+ CN
Sbjct: 149 EKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCN 208
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
IL+ + + A + L+ D I+ SI +
Sbjct: 209 ILVSGICKDGDVEEALEILDGMKLAGPV----------PDVIT------YNSIIHALCVA 252
Query: 498 PN-SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ K S P T+N L+ C +AL + EM + P+ I++TIL
Sbjct: 253 GKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
++ G V+ A +L+ + G PDV+AYT+ + +S +++A L +EM
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ +V Y +L+ R G++H+ ++ LA
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILA 400
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 191/442 (43%), Gaps = 41/442 (9%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
S+P++ T+I+ ++ A E +++ + ++ N L++ D++ L
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M+ G + D+ +YN ++ A C+AG V A EI + D+ T++T+
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS-------CSPDLVTFNTL 277
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A AL+V E+M + P+ IT++ L+N G V+ A +L EE+++ G
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ ++ + + A +L + ++ +T V + R N+ HK +
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV-HKAR 396
Query: 488 QSITN-------TPNFVPNSHYSSFDKRFS---------------FKPTTTTYNILMKAC 525
+ + P F N K S + P TYN L+
Sbjct: 397 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C RV+ L +EM + G PN ++ ++ G V+ A ++ M +P+
Sbjct: 457 CK-ANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
VV YT+ I +S R+ A + + M+ + + Y L+ + S G V + +A
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGG---RVAEAMA 572
Query: 643 VYQDMWKAGYKANDTYLKELIE 664
+Y +M G+ + + K L E
Sbjct: 573 MYDEMVARGFLPDGSTSKTLEE 594
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 195/441 (44%), Gaps = 85/441 (19%)
Query: 290 NIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+++ + H + T +VYK++ G ++ ++ IL++ C AG + A E
Sbjct: 26 DVHSYNHLLDILVKSGHHFR-TGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEF 84
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + DV+ ++ ++ +F D Q A+K+ E+M S+ V P +T++++I
Sbjct: 85 LRALDEFS----VAPDVYIFNVLIHGLFKDGNPDQ-AVKLFENMESSRVKPEIVTYNTVI 139
Query: 406 NACANAGLVEQAMHLFEEMLQAGCE--PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ +G +E+A L EEM++ G + P+ N L+ A F RA R+ + +
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA------FYRASRIREACAFRE 193
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
A G P T NIL+
Sbjct: 194 KMKAAG-----------------------------------------INPDVLTCNILVS 212
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D +AL ++ M+ G P+ I++ +I A +G V A +ILK M SP
Sbjct: 213 GICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSP 269
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+V + T + ++ L +A + EEM I P+++TY L+ R G +VQ
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG---QVQVAF 326
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTL----------------- 683
+ +++ + GY + L++ C+ G I++ ++ E+++
Sbjct: 327 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGY 386
Query: 684 CRRTNSQRPQSLLLEKVAVHL 704
CR N + + +L E V++++
Sbjct: 387 CRAGNVHKAREILAEMVSINM 407
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 510 SFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+K +YN IL+K+ ++R + ++ G SPN +++ ILI +G
Sbjct: 22 GYKHDVHSYNHLLDILVKS--GHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+ L+ + E ++PDV + I + QA LFE M+ +++P +VTY T++
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ G+L + ++ L ++M + G K+
Sbjct: 140 SGLCKSGNLEKARELL---EEMIRKGGKS 165
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 87/221 (39%), Gaps = 35/221 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G+ K+R I ++ S N+ ++ +N ++ + + + + ++ G
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442
Query: 321 MADMASYNILL----------KAC----------CLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ D+ +YN L+ +AC C + L ++G +
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502
Query: 361 L-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L +V Y++++ + A V + M GV + + LI + +
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G V +AM +++EM+ G P+ L +A + F+
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
>gi|307106834|gb|EFN55079.1| hypothetical protein CHLNCDRAFT_134967 [Chlorella variabilis]
Length = 668
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 197/482 (40%), Gaps = 114/482 (23%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N L+N A D+K ++K GV+ D +++N LLKAC + G V E+ + +
Sbjct: 148 NLLLNSLAWDIKLQFVRCNQLRKEGVVPDASTFNTLLKAC-MRGRDVRRAEL--ALSWMR 204
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
GV D TY+T++KVF+ AK ++ L V + M +AG P W SL+ AC+ AG +
Sbjct: 205 EDGVPP-DSVTYNTLIKVFSYAKDFERVLAVWKQMQAAGFAPTARLWGSLLMACSAAGQM 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNI-----LLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
EQA + EM Q + N ++ AC +A Q++RA F + ALG
Sbjct: 264 EQAAIFWWEMKQLHSQGNGGVLTTDNVCAMMTACNDAGQYERALTAF------EEAKALG 317
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D T YNI ++AC T
Sbjct: 318 VPMD-----------------------------------------TRAYNIALRACHTPG 336
Query: 530 YRVK--------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI-------- 573
++ AL +E++ GL P+ ++ L C + A+Q +
Sbjct: 337 KTMRQEQLLQAFALYDELKQRGLPPDTFTFGTLFALCAAARQGHCAMQATRPSPLPTPTP 396
Query: 574 -----------MREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKH--YQIQPNLV 619
M E + +VVA T IK V + LF+ M + +++PN
Sbjct: 397 APLSFPQLYDEMMELKVQENVVAMTALIKAVGCTPGMAAECSRLFKRMSYGPARVKPNQA 456
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
T+ T++ A G L E L VYQ M + Y A+++ + L E ++ +
Sbjct: 457 TFRTVIAALREQGELAEA---LRVYQGMRRL-YPADNSEFEGLTAVAAERAFSSEDADLR 512
Query: 680 EV--TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKE 737
V +C T+SQ ++DL G++ +EAR VL +L M+++
Sbjct: 513 SVVAAVCHITSSQ----------------------SVDLHGMSVLEARAAVLCILAMLQQ 550
Query: 738 NY 739
Y
Sbjct: 551 QY 552
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T T N+L+ + D N++R G+ P+ ++ L+ AC +V A L M
Sbjct: 144 TATVNLLLNSLAWDIKLQFVRCNQLRKEGVVPDASTFNTLLKACMRGRDVRRAELALSWM 203
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
REDG+ PD V Y T IKV +K ++ +++++M+ P + +LL A S G +
Sbjct: 204 REDGVPPDSVTYNTLIKVFSYAKDFERVLAVWKQMQAAGFAPTARLWGSLLMACSAAGQM 263
Query: 635 HEV 637
+
Sbjct: 264 EQA 266
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 195/494 (39%), Gaps = 37/494 (7%)
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+LA R+ I P + +L VR F + LR D+ +P++ I +++ G
Sbjct: 86 SLAARHR-IPPPSALLLSKLVRRFSSPAEAAGFLR--DSLASGAPAPDISIFNSLLTALG 142
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG--VMAD 323
G+ ++ +R +V ++ + L+N + + L+V M G V D
Sbjct: 143 RAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPD 202
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+A N ++ C G L Q I + + + TY+ + F MA
Sbjct: 203 IAILNTVVDGLCKIGR--LQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMAC 260
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP--NSQCCNILLQ 441
K+ M GV PN IT +++I G V A+ F E E N+ + L
Sbjct: 261 KIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLAS 320
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + D A LF D+ D + M +T +
Sbjct: 321 AFLHCNNVDMAMELFHEMA----------DHGHRPDAV--MYFTMISGLTQAGRLLDACT 368
Query: 502 YSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
++ K+ FK YNIL+ C + L+ EM+ VGL P+ ++ L+
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G+ ++L M +DG P VV + T + ++ + +A +F M +IQPN V
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTV 488
Query: 620 TYITLLR--ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
Y TL+ +SR EV + ++ +M + AN T L++ +QDK
Sbjct: 489 IYNTLIDFLCKSR-----EVDVAIKLFDEMREKNVPANVTTYNALLKG-----LQDKKMA 538
Query: 678 QGEVTLCRRTNSQR 691
+ L R +R
Sbjct: 539 EKAFELMDRMREER 552
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 164/391 (41%), Gaps = 46/391 (11%)
Query: 254 PNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNV---TLNIYVFNSLMNV--NAHDLKF 307
P++ I T++D G+C ++ I+ D R ++V N +N L + D+
Sbjct: 201 PDIAILNTVVD--GLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGM 258
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL--EAKGVLKLDVFT 365
++ M+K GV ++ + N ++ C G A E + E + + EA+G + T
Sbjct: 259 ACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG----NAVT 314
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST+ F MA+++ +M G P+ + + ++I+ AG + A M
Sbjct: 315 YSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMK 374
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+AG + +++ NIL+ F R +L ++ L + +G D T
Sbjct: 375 KAGFKLDAKAYNILIGG------FCRKKKLHEAYELLEEMKGVGLQPDVYTYN------- 421
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSF------KPTTTTYNILMKACCT-----DYYRVKA 534
T +S+ D+ +P+ T+ L+ C + R+
Sbjct: 422 -----TLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
M+E R + PN + + LID S V+ A+++ MRE + +V Y +K
Sbjct: 477 SMDEAR---IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQ 533
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
K ++AF L + M+ + PN VT L+
Sbjct: 534 DKKMAEKAFELMDRMREERCTPNYVTVDVLM 564
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E+++ + ++Y +N+L++ A D E+ +M G + ++ L+ C
Sbjct: 404 LLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYC 463
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG T A I+ + EA+ ++ + Y+T++ ++ +A+K+ ++M V
Sbjct: 464 KAGKTDEALRIFRSMD--EAR--IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
N T+++L+ + + E+A L + M + C PN ++L++ E + +R
Sbjct: 520 ANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 202/495 (40%), Gaps = 78/495 (15%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L + V + V+N L+NV A +K VY M G+ D+ + N L+KA C A
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + E+ + + D T++T+++ F + + AL+VK M+ G +P +
Sbjct: 211 VRTAVLMLEEM----SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T + LIN G VE A+ ++ + G EP+ N + + A ++
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM--- 323
Query: 460 TLSKTQVALGEDYD--------------GNTDRISNMEHK--DKQSITNTPNF------- 496
+ G D D G D + ++ D+ + +T F
Sbjct: 324 ---DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
Query: 497 -VPNSHYSSFD--KRFSFK---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
N + D + + K P T+NIL+ A C D + L EM++ G +P+
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ILID G + AL +LK M +G V Y T I + R+++A +F++
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M + I + VT+ TL+ + + + + + + M K G + ++ ++ +C+
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELI---EQMVKEGLQPSNITYNSILTHYCK 557
Query: 669 GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID-------LRGLTK 721
QG+ L+K A L+ A ID + GL K
Sbjct: 558 ---------QGD----------------LKKAADILETMTANGFEIDVVTYGTLINGLCK 592
Query: 722 VEARIIVLAVLRMMK 736
+ L +LR M+
Sbjct: 593 AGRTQVALKLLRGMR 607
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 165/384 (42%), Gaps = 32/384 (8%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N+++N + +L + M G + D ++N L+ A C +E
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL---EEAL 390
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ L KG L DV+T++ ++ + +++ E+M S+G P+ +T++ LI+
Sbjct: 391 DLARELTVKG-LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKT 464
+ G + A+ L +EM GC ++ N ++ A + + + A +F + +S++
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI + +Q + + +P+ TYN ++
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMV-----------------KEGLQPSNITYNSIL 552
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + ++ M G + +++ LI+ +G + AL++L+ MR G+
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P AY I+ R L+ A SLF EM P+ +TY + R R G +++
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGG--PIKEA 670
Query: 641 LAVYQDMWKAGYKANDTYLKELIE 664
+M G+ + + L E
Sbjct: 671 FDFLVEMVNKGFMPEFSSFRMLAE 694
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 136/617 (22%), Positives = 251/617 (40%), Gaps = 71/617 (11%)
Query: 88 EEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPL 147
E+FA S V E + K + + +++ G+V+ +R + GV++ E A L
Sbjct: 83 EDFA---PSRAVYEEIIQKLGTAGAFDLM-EGLVREMRREGHEAGAGVVRSFVE-SYARL 137
Query: 148 ELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV 207
FD L++N+ + ++ L+ VL E +K L+ + + +PDV
Sbjct: 138 RRFD-DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS-RMKLLESVYNEMTDRGIQPDV 195
Query: 208 ---NLAIRYAC------------------IVPRADILFCNFVREFGKKRDLVSALRAYDA 246
N I+ C V + F ++ F ++ + +ALR
Sbjct: 196 VTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255
Query: 247 SKKHLSSPNMYICRTIIDVCGICG--------DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+ SP +I+ G C Y++ + I + VT N +V +
Sbjct: 256 MMETGCSPTRVTVNVLIN--GYCKMGRVEDALGYIQ-KEIADGFEPDQVTYNTFV--HCL 310
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
N H + L+V M + G D+ +YN ++ CL+ N L E G V + +G
Sbjct: 311 CQNGH-VSHALKVMDLMLQEGHDPDVFTYNTVIN--CLSKNGEL-DEAKGIVNQMVDRGC 366
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L D T++T++ + AL + ++ G++P+ T++ LINA G +
Sbjct: 367 LP-DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGN 475
LFEEM +GC P+ NIL+ + A L + S ++ V Y+
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT----YNTI 481
Query: 476 TDRI-SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D + M ++ + + + D + T+N L+ C A
Sbjct: 482 IDALCKQMRIEEAEEV-----------FDQMDAH-GISRSAVTFNTLIDGLCKAKRIDDA 529
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ +M GL P++I++ ++ G+++ A IL+ M +G DVV Y T I
Sbjct: 530 TELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLING 589
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ R + A L M+ I+P Y ++++ R +L + L+++++M + G
Sbjct: 590 LCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA---LSLFREMTEVGE 646
Query: 653 KANDTYLKELIEEWCEG 669
+ K + C G
Sbjct: 647 PPDALTYKIVFRGLCRG 663
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 134/339 (39%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD ++E+++S + +N L++ + L L+
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M+ G +YN ++ A C A+E++ + ++A G+ + V T++T++
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ---MDAHGISRSAV-TFNTLI 517
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
AK A ++ E M+ G+ P+ IT++S++ G +++A + E M G E
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R +
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIK---------------------------- 609
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 610 -------------------GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A L M G P+ ++
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 689
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V + N++ T G+ + + L++ ++ + M + G+ PDVV T IK
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ +++ A + EEM + + P+ T+ TL++ GS ++ L V M + G
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS---IEAALRVKTKMMETG 260
Query: 652 YKANDTYLKELIEEWCE-GVIQD 673
+ LI +C+ G ++D
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVED 283
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 217/504 (43%), Gaps = 46/504 (9%)
Query: 151 DGSGFKL-LKNEC---QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPD 206
D GF+ L++ C + L+ SG V L+ L + +LPV D + R +++ D
Sbjct: 171 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMAD 230
Query: 207 VNLAIRYACIVPRADIL---FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
+N V D+L +C R G R+ + R + A+K P + C ++
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFR-FLANKGVF--PTVKTCTFLL 286
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
+ KS ++E +R Q V+ ++Y+F++ +N ++ ++++ +M+KLGV
Sbjct: 287 SSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 345
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YN L+ C GN E + + + GV + TYS ++ + +
Sbjct: 346 PNVVTYNNLIHGLCKHGNL---DEAFRFKEKMVKDGV-NATLITYSVLINGLMKLEKFNE 401
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++ L G TPN + +++LI+ G + A+ + +M+ G PNS N ++Q
Sbjct: 402 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 461
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ Q ++A + L + N + + H NS
Sbjct: 462 GFCKIGQMEQAECILEE--------MLSRGFSINPGAFTTIIHW----------LCMNSR 503
Query: 502 YSSFDKRF-------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWT 552
+ S RF + +P L+ C + A+ R + G N ++
Sbjct: 504 FES-ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI +GN++ A+++LK M E G D + Y T I C + ++++ F L EM
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 613 QIQPNLVTYITLLRARSRYGSLHE 636
I+P+ TY L+ R G L E
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDE 646
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 202/465 (43%), Gaps = 38/465 (8%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++++ + + K +L ALR +PN +II G C G ++ I
Sbjct: 418 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ--GFCKIGQMEQAECI 475
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
E++ S+ ++N F ++++ + +F L + M + + L+ C
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ + LE KG ++ T + ++ Q A+++ + ML G
Sbjct: 536 EGKHSDAVELW--FRLLE-KG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ IT+++LI+ C G VE+ L EM++ G EP++ N+L+ + D A L+
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651
Query: 457 ---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+S L G DG D+I E + +T +
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-----------------NL 694
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ + YN L++A C + V+A L ++MR+ G+ P +++ LI G +E A
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ MR++G+ P+VV YT I + ++ + ++ +EM Y I PN +TY ++ S
Sbjct: 755 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 814
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ G + + L +M G + L +C EG I++
Sbjct: 815 KSGDMKTAAKLL---HEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 30/364 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T++ G+C G + + ++ L + N+ N+L++ +++ +
Sbjct: 521 PNDGLLTTLVG--GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M + G + D +YN L+ CC G ++ GE+ K ++ D FTY+ +
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM----VKQGIEPDTFTYNLL 634
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + + S + PN T+ +I+ A +E+ LF E+L
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E NS N L++A AF+L RS + T G + I ME D
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN-IGRME--D 751
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + + ++ P Y L+ C +V ++ EM + +
Sbjct: 752 AKCLIDE------------MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T++ID SG+++ A ++L M G+ PD V Y + ++++
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859
Query: 605 LFEE 608
L E+
Sbjct: 860 LAED 863
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 144/354 (40%), Gaps = 33/354 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL---KLDVFTYSTIVKVFA-DAKWW 379
+A+ ++L+ C V + G + L KGV K F S++VK + +W
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + GV+P+ +S+ INA G VE A+ LF +M + G PN N L
Sbjct: 301 VF------ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 354
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + D AFR F+ + A Y + + +E N N V
Sbjct: 355 IHGLCKHGNLDEAFR-FKEKMVKDGVNATLITYSVLINGLMKLEK------FNEANSVLK 407
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
+ +K F+ P YN L+ C D R++ +M + G++PN ++ +
Sbjct: 408 ---ETLEKGFT--PNEVVYNTLIDGYCKMGNLGDALRIRG---DMVSKGINPNSVTLNSI 459
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G +E A IL+ M G S + A+TT I + R + A EM +
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN TL+ + G + + ++ + + G+ AN LI C+
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDA---VELWFRLLEKGFGANLVTTNALIHGLCK 570
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ ++ I+A G VE A+Q+ M + G+SP+VV Y I + L +A
Sbjct: 308 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 367
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F E+M + L+TY L+ + +E +V ++ + G+ N+ L
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN---SVLKETLEKGFTPNEVVYNTL 424
Query: 663 IEEWCE-GVIQDKNQNQGEV 681
I+ +C+ G + D + +G++
Sbjct: 425 IDGYCKMGNLGDALRIRGDM 444
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 165/414 (39%), Gaps = 59/414 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V + +N +++V + + M+
Sbjct: 179 TVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 238
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ ACC G L E + L+A+G V TY+ +++VF A
Sbjct: 239 AGVEPDGFTASTVIAACCRDG---LVDEAVAFFEDLKARGHAPC-VVTYNALLQVFGKAG 294
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V +M G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 295 NYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYN 354
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF D++
Sbjct: 355 TVMTAYGNVGKVDEALALF--------------------DQM------------------ 376
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 377 ---------KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 427
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L+ MR G+ Y T I R AF ++ EM
Sbjct: 428 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 487
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P + TY LL SR G Q ++ M G+K N+ L++ + +G
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQ---SIVSKMRTKGFKPNEQSYSLLLQCYAKG 538
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 196/452 (43%), Gaps = 72/452 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + ++ +P + ++DV G G + + A+ +++R+ V + + ++++
Sbjct: 193 ALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVI 252
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + +YN LL+ AGN A + GE +E
Sbjct: 253 AACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGE---MEQN 309
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A + + M S G+ PN T+++++ A N G V++
Sbjct: 310 GC-QPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDE 368
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF++M + G PN N++L + +F + + S T +A
Sbjct: 369 ALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA 428
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T + M + +T N + ++ + +FK
Sbjct: 429 VCGKRGMEDY--VTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGF 486
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++MRT G PN S+++L+ GNV G
Sbjct: 487 TPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAA 546
Query: 570 I------------------------LKIMREDGM------------SPDVVAYTTAIKVC 593
I K R DGM +PD+V + + + +
Sbjct: 547 IENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIY 606
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ +A +F+ +K + P+L+TY +L+
Sbjct: 607 AKNGMYSKATEVFDSIKRSGLSPDLITYNSLM 638
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
ASK L PN + T++ G G ++ A+++ ++ N+ +N ++ +
Sbjct: 342 ASKGLL--PNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKS 399
Query: 306 KFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+FT LE+ M + G + ++N +L C G + + ++ + + GV +L
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMRSCGV-ELSR 455
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + A K+ +M SAG TP T+++L+N + G A + +
Sbjct: 456 DTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSK 515
Query: 424 MLQAGCEPNSQCCNILLQ--------ACVEACQFD--RAFRLFRSWTLSKTQVALGEDYD 473
M G +PN Q ++LLQ A + A + + + +F SW + +T V +
Sbjct: 516 MRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIA----N 571
Query: 474 GNTDRISNME--HKDKQSITNTPNFV----------PNSHYSS----FD--KRFSFKPTT 515
R+ ME ++ ++ P+ V N YS FD KR P
Sbjct: 572 FKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDL 631
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMR-TVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN LM A C++ + + ++N+++ + + P+ +S+ +I+ G V+ A ++L
Sbjct: 632 ITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLS 691
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M DGM+P V Y T + + +A + M + ++P +TY ++ + R
Sbjct: 692 EMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAK 751
Query: 633 SLHEVQQCLA 642
E + L+
Sbjct: 752 RFEEARGFLS 761
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 197/489 (40%), Gaps = 82/489 (16%)
Query: 231 FGKKRDLVSALRA----------------------------YDASKKHLSS-------PN 255
FGK + ALR ++ + + L + PN
Sbjct: 290 FGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPN 349
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYK 313
+ T++ G G ++ A+++ ++ N+ +N ++ + +FT LE+
Sbjct: 350 AFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLG 409
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M + G + ++N +L C G + + ++ + + GV +L TY+T++ +
Sbjct: 410 EMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMRSCGV-ELSRDTYNTLIAAY 465
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A K+ +M SAG TP T+++L+N + G A + +M G +PN
Sbjct: 466 GRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNE 525
Query: 434 QCCNILLQ--------ACVEACQFD--RAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
Q ++LLQ A + A + + + +F SW + +T V + R+ ME
Sbjct: 526 QSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIA----NFKCRRLDGME 581
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
++ K + P +N ++ + Y + + + ++
Sbjct: 582 TAFQEV-----------------KARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKR 624
Query: 542 VGLSPNHISWTILID---ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
GLSP+ I++ L+D C S E L LK + M PDVV+Y T I +
Sbjct: 625 SGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQT--MKPDVVSYNTVINGFCKQGL 682
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+K+A + EM + P VTY TL+ Y SL + V M + G K +
Sbjct: 683 VKEAQRVLSEMVADGMAPCAVTYHTLVGG---YSSLEMFSEAREVIGYMVQHGLKPMELT 739
Query: 659 LKELIEEWC 667
+ ++E +C
Sbjct: 740 YRRVVESYC 748
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ K +P++ I +++ + G Y K+ +++ ++ ++ ++
Sbjct: 573 KCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLI 632
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYG 348
+NSLM++ A + E K + +L + D+ SYN ++ C G AQ +
Sbjct: 633 TYNSLMDMYAK-CSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLS 691
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + A G+ V TY T+V ++ + + A +V M+ G+ P +T+ ++ +
Sbjct: 692 E---MVADGMAPCAV-TYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESY 747
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
A E+A E+ + + + + L+A +E QF R
Sbjct: 748 CRAKRFEEARGFLSEVSETDLDFDKKA----LEAYIEDAQFGR 786
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DV AYTT + R+ R ++A LF E++ + P LVTY +L R G + +
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMG--RSWPRIV 230
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
A+ +M AG + + +I C + D+
Sbjct: 231 ALLDEMRAAGVEPDGFTASTVIAACCRDGLVDE 263
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 183/437 (41%), Gaps = 56/437 (12%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + KK + + Y +SPN+ T+ID C GD++K+ +++++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + ++ L+ + + + +++ M+ G++ ++ +YN ++ C +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+Y E + G+L +V T+ ++ A K DM S GV PN +
Sbjct: 281 KALELYXE---MLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI+ AG + +A+ L E+ + P+ +IL++ C DR
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG---LCGVDRM--------- 384
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
E+ DG + K+ F P TYN L
Sbjct: 385 --------EEADGLLQEM---------------------------KKKGFLPNAVTYNTL 409
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + KA+ ++M G+ PN I+++ LID +G +E A+ + M G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVAYT I + K+AF L +EM+ + PN+ T L+ + G + + +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 640 CLAVYQDMWKAGYKAND 656
G K N+
Sbjct: 530 LFLAKTGTDTTGSKTNE 546
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 180/449 (40%), Gaps = 58/449 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
++ D + A R +D + P + I +I G+CG+ S A ++ +R+ + N
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR--GLCGESRISEAESMFRTMRNSGMLPN 262
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA-------------------------- 322
+Y +N++M+ +K LE+Y M G++
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI 322
Query: 323 DMAS---------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
DMAS YN L+ C AGN A ++ E++ E + DVFTYS ++K
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE----ILPDVFTYSILIKGL 378
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + ++M G PN +T+++LI+ G +E+A+ + +M + G EPN
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHK 485
+ L+ +A + + A L+ + + T + G DGNT + HK
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL-HK 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ Q PN S D + + + TD K NE+ S
Sbjct: 498 EMQEAGLHPNVFTLS--CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT--NELDRSLCS 553
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PNH+ +T LI G + A + MR G+ PDV I+ R+ L+ L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ I PN Y L + G L
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYL 642
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 173/425 (40%), Gaps = 59/425 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P M C ++D G + +Y D+ ++ + N+ + +L++ D +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + + Y IL++ C A+ ++ + + G+L +++TY+T++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF---RTMRNSGMLP-NLYTYNTMMD 271
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + AL++ +ML G+ PN +T+ LI+ + A +M G P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ +A A L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSL------------------------------------ 355
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+S +K P TY+IL+K C L+ EM+ G PN +
Sbjct: 356 ----------HSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GN+E A+++ M E G+ P+++ ++T I ++ +++ A L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-E 668
+ P++V Y L+ + G+ E ++++M +AG N L LI+ C +
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 669 GVIQD 673
G I D
Sbjct: 522 GRISD 526
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 163/404 (40%), Gaps = 85/404 (21%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L+KT G D G S + D+ P
Sbjct: 530 LF----LAKT----GTDTTG-------------------------SKTNELDRSLC-SPN 555
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L++ CTD ++ ++MR GL P+ + ++I + ++ + +
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + G+ P+ Y K S LK A S E +QP
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQP 655
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 148/313 (47%), Gaps = 54/313 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T+S ++ V +++AL V DM +AG N +T+++LI+ +G E+A+ +
Sbjct: 325 NVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVL 384
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
E+M + +P ++ N L+ AC + Q+ A R++ S
Sbjct: 385 EQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAAS------------------- 425
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
S P TTTYN L+ A D +V A+ EM
Sbjct: 426 ----------------------------SHPPNTTTYNALISAHSKGGDLPKVLAVFKEM 457
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G + I+++ LI AC +G + ALQ+ + MR +G P+V++Y + I C + +
Sbjct: 458 VQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQW 517
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A +FE+M+ +P++V+Y L++A R G + ++ LA +++M +A A D+ +
Sbjct: 518 EKAAEVFEQMQRQGCRPDVVSYTALIQAYERGG---QWRRALAAFEEMIRARPCAPDSIV 574
Query: 660 KELIEE--WCEGV 670
I + W GV
Sbjct: 575 YNTIIDVLWETGV 587
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+ T+IDV G G + ++ A+ E ++ + + FN+LM ++ + L VY
Sbjct: 360 NVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVY 419
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + +YN L+ A G+ ++ K + KG + V TYS+++
Sbjct: 420 EQMAASSHPPNTTTYNALISAHSKGGDL---PKVLAVFKEMVQKGCER-SVITYSSLISA 475
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A W++AL++ E+M G PN I+++SLI ACA E+A +FE+M + GC P+
Sbjct: 476 CEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPD 535
Query: 433 SQCCNILLQACVEACQFDRAFRLF 456
L+QA Q+ RA F
Sbjct: 536 VVSYTALIQAYERGGQWRRALAAF 559
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ F + + ++DL A+ + + N++ +++VC CG Y + +Y
Sbjct: 291 EFTFTSMISNCVAQQDLGRAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYR 350
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+++ N+ +N+L++V ++ L V + M++ + ++N L+ AC +
Sbjct: 351 DMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSN 410
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +Y ++ A + TY+ ++ + L V ++M+ G +
Sbjct: 411 QWQEALRVYEQM----AASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSV 466
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
IT+SSLI+AC AG + A+ LFEEM GC PN N L+ AC + Q+++A +F
Sbjct: 467 ITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVF 524
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +GK AL + K+ P T++ C + ++ +YE
Sbjct: 362 VTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQ 421
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N +N+L++ ++ DL L V+K M + G + +Y+ L+ AC AG
Sbjct: 422 MAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGE 481
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA +++ E++ +G + +V +Y++++ A W+ A +V E M G P+ +
Sbjct: 482 WKLALQLFEEMR---GEGCVP-NVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVV 537
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILL 440
++++LI A G +A+ FEEM++A C P+S N ++
Sbjct: 538 SYTALIQAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTII 579
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 193/443 (43%), Gaps = 34/443 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ T+ID G G ++ + + + ++ +NSL++ + +K
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKY 329
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ +M + GV ++ +Y ++ C A ++ E+K+ K ++ D+ TY++++
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY---KNMIP-DIVTYTSLI 385
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A+ + + M G+ P+ +++ L++A G +E A F+ +L G
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGE-DYDGNTDRI 479
N Q N+++ +A F A L + T AL E D + ++I
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKI 505
Query: 480 ------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYR 531
++ K + + + + KP TY LM +
Sbjct: 506 LREMIARGLQEARKVRLKEAKIVL------AVMTKACIKPDVVTYGTLMDGYFLVNELKH 559
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K + M +G++PN +TI+ID V+ A+ + + M+ M P++V YT+ I
Sbjct: 560 AKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLID 619
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ L++A +L +EMK + IQP++ +Y LL + G L ++ ++Q + G
Sbjct: 620 ALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE---IFQRLLVKG 676
Query: 652 YKANDTYLKELIEEWCEGVIQDK 674
Y N +I E C+ + D+
Sbjct: 677 YHLNVQVYTAMINELCKAGLFDE 699
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 111/436 (25%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ T+ID G+C + M A ++E+++ +N+ +I + SL++ H L+
Sbjct: 340 TPNVRTYTTMID--GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAG----------------------------NT 340
+ + K M++ G+ D+ SY ILL A C G N
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457
Query: 341 VLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--- 393
+ +++GE L E KG + D T+ TI+ + A K+ +M++ G
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMP-DAITFKTIICALFEKDENDKAEKILREMIARGLQE 516
Query: 394 --------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ P+ +T+ +L++ ++ A ++F M Q G PN
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
QC I++ + D A LF M+HK
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEE-----------------------MKHK-------- 605
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISW 551
N PN TY L+ A C +++ R AL+ EM+ G+ P+ S+
Sbjct: 606 -NMFPN---------------IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
TIL+D SG +EGA +I + + G +V YT I ++ +A L +M+
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709
Query: 612 YQIQPNLVTYITLLRA 627
P+ VT+ ++ A
Sbjct: 710 KGCMPDAVTFDIIIWA 725
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 158/395 (40%), Gaps = 54/395 (13%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++++ S T ++ N LMN H + F V N+ K G + + N L+K
Sbjct: 84 SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGL 143
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A + +V A+G +L+ +Y T++ + ++ + V
Sbjct: 144 CFRGEIKKALYFHDQV---VAQG-FQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSV 199
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + ++++I++ L+ A L+ EM+ G PN N L+ AF
Sbjct: 200 KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L L N D + N+ + K K
Sbjct: 260 LLNEMKLKNI----------NPDVCTF-----------------NTLIDALGKEGKMKAA 292
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++MKAC + P+ +++ LID V+ A + M
Sbjct: 293 KIVLAVMMKAC------------------IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G++P+V YTT I + K + +A SLFEEMK+ + P++VTY +L+ +
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN--- 391
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
H +++ +A+ + M + G + + L++ C+G
Sbjct: 392 HHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 59/374 (15%)
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNM 315
RT+I+ G+C G+ + L +V ++ ++N++++ + L ++Y M
Sbjct: 172 RTLIN--GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+ ++ +YN L+ C+ G+ +E + + ++ K + DV T++T++
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHL---KEAFSLLNEMKLKNI-NPDVCTFNTLIDALGK 285
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A V M+ A + P+ +T++SLI+ V+ A ++F M Q+G PN +
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
++ + D A LF M++K N
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEE-----------------------MKYK---------N 373
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
+P+ TY L+ C +++ R AL +M+ G+ P+ S+TI
Sbjct: 374 MIPD---------------IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+DA G +E A + + + G +V Y I ++ +A L +M+
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 614 IQPNLVTYITLLRA 627
P+ +T+ T++ A
Sbjct: 479 CMPDAITFKTIICA 492
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 198/504 (39%), Gaps = 94/504 (18%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ + + LR + H P++ + TII +C + + A +Y ++ + ++
Sbjct: 182 GETKAVARLLRKLEG---HSVKPDVVMYNTIIH--SLCKNKLLGDACDLYSEMIVKGISP 236
Query: 290 NIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ +N+L+ + H LK + M+ + D+ ++N L+ A G A+ +
Sbjct: 237 NVVTYNALVYGFCIMGH-LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIV 295
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ K +K DV TY++++ + + A V M +GVTPN T++++I+
Sbjct: 296 LA----VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMID 351
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+V++AM LFEEM P+ L+ + +RA L + Q
Sbjct: 352 GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ- 410
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA 524
D T + + + + N F F + + TYN+++
Sbjct: 411 ---PDVYSYTILLDALCKGGR--LENAKEF--------FQRLLVKGYHLNVQTYNVMING 457
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS-- 580
C + L ++M G P+ I++ +I A + A +IL+ M G+
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEA 517
Query: 581 ---------------------PDVVA---------------------------------- 585
PDVV
Sbjct: 518 RKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQ 577
Query: 586 -YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
YT I + K + +A SLFEEMKH + PN+VTY +L+ A + H +++ +A+
Sbjct: 578 CYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKN---HHLERAIALL 634
Query: 645 QDMWKAGYKANDTYLKELIEEWCE 668
++M + G + + L++ C+
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCK 658
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 148/423 (34%), Gaps = 73/423 (17%)
Query: 211 IRYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
++Y ++P DI+ + + + K L A+ K+ P++Y ++D
Sbjct: 369 MKYKNMIP--DIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++ L + LN+ +N ++N A +++ M+ G M D ++
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486
Query: 328 NILLKACCLAGNTVLAQEIYGE-----------VKHLEAKGVL--------KLDVFTYST 368
++ A A++I E V+ EAK VL K DV TY T
Sbjct: 487 KTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGT 546
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A V M GVTPN ++ +I+ V++AM LFEEM
Sbjct: 547 LMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN 606
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN L+ A + +RA L +
Sbjct: 607 MFPNIVTYTSLIDALCKNHHLERAIALLKEM----------------------------- 637
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
K +P +Y IL+ C K + + G
Sbjct: 638 ------------------KEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHL 679
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T +I+ +G + AL + M + G PD V + I +A +
Sbjct: 680 NVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKIL 739
Query: 607 EEM 609
EM
Sbjct: 740 XEM 742
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 11/181 (6%)
Query: 495 NFVPNSHYS---SFDKRF---SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ V N HY S K+F P T NILM C T +++ + G P
Sbjct: 72 SLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHP 131
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I+ LI G ++ AL + G + V+Y T I ++ K L
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+++ + ++P++V Y T++ + + L + +Y +M G N L+ +
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACD---LYSEMIVKGISPNVVTYNALVYGF 248
Query: 667 C 667
C
Sbjct: 249 C 249
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 503 SSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+SFD+ +P T+ N ++ + + Y V +L + + G +P+ + IL++
Sbjct: 49 ASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCF 108
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A +L + + G P+ + T IK +C R + +K+A +++ Q N
Sbjct: 109 CHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGE-IKKALYFHDQVVAQGFQLN 167
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
V+Y TL+ + G V + L
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLL 191
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 216/504 (42%), Gaps = 46/504 (9%)
Query: 151 DGSGFKL-LKNEC---QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPD 206
D GF+ L++ C + L+ SG V L+ L + +LPV D + R +++ D
Sbjct: 104 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMAD 163
Query: 207 VNLAIRYACIVPRADIL---FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
+N V D+L +C R G R+ + R + A+K P + C ++
Sbjct: 164 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFR-FLANKGVF--PTVKTCTFLL 219
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
+ KS ++E +R Q V+ ++Y+F++ +N ++ ++++ +M+KLGV
Sbjct: 220 SSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 278
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YN L+ C GN E + K K + + TYS ++ + +
Sbjct: 279 PNVVTYNNLIHGLCKHGN---LDEAF-RFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 334
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++ L G TPN + +++LI+ G + A+ + +M+ G PNS N ++Q
Sbjct: 335 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 394
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ Q ++A + L + N + + H NS
Sbjct: 395 GFCKIGQMEQAECILEEM--------LSRGFSINPGAFTTIIHW----------LCMNSR 436
Query: 502 YSSFDKRF-------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWT 552
+ S RF + +P L+ C + A+ R + G N ++
Sbjct: 437 FES-ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI +GN++ A+++LK M E G D + Y T I C + ++++ F L EM
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 613 QIQPNLVTYITLLRARSRYGSLHE 636
I+P+ TY L+ R G L E
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDE 579
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 202/465 (43%), Gaps = 38/465 (8%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++++ + + K +L ALR +PN +II G C G ++ I
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ--GFCKIGQMEQAECI 408
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
E++ S+ ++N F ++++ + +F L + M + + L+ C
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ + LE KG ++ T + ++ Q A+++ + ML G
Sbjct: 469 EGKHSDAVELW--FRLLE-KG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ IT+++LI+ C G VE+ L EM++ G EP++ N+L+ + D A L+
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Query: 457 ---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+S L G DG D+I E + +T +
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-----------------NL 627
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ + YN L++A C + V+A L ++MR+ G+ P +++ LI G +E A
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ MR++G+ P+VV YT I + ++ + ++ +EM Y I PN +TY ++ S
Sbjct: 688 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 747
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ G + + L +M G + L +C EG I++
Sbjct: 748 KSGDMKTAAKLL---HEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 165/390 (42%), Gaps = 30/390 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T++ G+C G + + ++ L + N+ N+L++ +++ +
Sbjct: 454 PNDGLLTTLVG--GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M + G + D +YN L+ CC G ++ GE+ K ++ D FTY+ +
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM----VKQGIEPDTFTYNLL 567
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + + S + PN T+ +I+ A +E+ LF E+L
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E NS N L++A AF+L RS + T G + I ME D
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN-IGRME--D 684
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + + ++ P Y L+ C +V ++ EM + +
Sbjct: 685 AKCLIDE------------MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T++ID SG+++ A ++L M G+ PD V Y + ++++ F
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ + M + + +TY TL+ + +L
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 145/354 (40%), Gaps = 33/354 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFA-DAKWW 379
+A+ ++L+ C V + G + L KGV +K F S++VK + +W
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + GV+P+ +S+ INA G VE A+ LF +M + G PN N L
Sbjct: 234 VF------ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 287
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + D AFR F+ + A Y + + +E N N V
Sbjct: 288 IHGLCKHGNLDEAFR-FKEKMVKDGVNATLITYSVLINGLMKLEK------FNEANSVLK 340
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
+ +K F+ P YN L+ C D R++ +M + G++PN ++ +
Sbjct: 341 ---ETLEKGFT--PNEVVYNTLIDGYCKMGNLGDALRIRG---DMVSKGINPNSVTLNSI 392
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G +E A IL+ M G S + A+TT I + R + A EM +
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+PN TL+ + G + + ++ + + G+ AN LI C+
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVE---LWFRLLEKGFGANLVTTNALIHGLCK 503
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 109/224 (48%), Gaps = 12/224 (5%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLNIYVF 294
L A+ ++ K PN+Y +ID G C D ++ ++ +L +QN+ LN V+
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMID--GYCKADKIEEGEKLFTELLTQNLELNSVVY 634
Query: 295 NSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N+L+ + T+E +K +M+ G+ A+Y+ L+ C G A+ + E++
Sbjct: 635 NTLIRAYCRNGN-TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+G+L +V Y+ ++ + + V ++M S + PN IT++ +I+ + +
Sbjct: 694 K---EGLLP-NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKS 749
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G ++ A L EM+ G P++ N+L + + + F++
Sbjct: 750 GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ ++ I+A G VE A+Q+ M + G+SP+VV Y I + L +A
Sbjct: 241 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 300
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F E+M + L+TY L+ + +E +V ++ + G+ N+ L
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN---SVLKETLEKGFTPNEVVYNTL 357
Query: 663 IEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKV 700
I+ +C+ G + D + +G++ + P S+ L +
Sbjct: 358 IDGYCKMGNLGDALRIRGDMV----SKGINPNSVTLNSI 392
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 56/362 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ M+ +GV ++ Y IL++ACC G+ A+ ++ + L L + + Y+
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG----LAANQYIYTI 182
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ + M GV PN T++SLI G + A +F+E+ + G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ NIL+ Q +A +G +R+
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKA--------------------EGLLERM--------- 273
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
KR PTT T+N+LM C KAL + +++ +GL P
Sbjct: 274 ------------------KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ ILI GN ++++ M + G+SP V YT + VRS +++A+ +F
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
MK + P+ TY L+ G++ E + +Y+ M + + ND +I +
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASK---LYKSMVEMHLQPNDVIYNTMINGY 432
Query: 667 CE 668
C+
Sbjct: 433 CK 434
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 62/411 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN++I +I+ C GD +++ ++ + + N Y++ ++N K E
Sbjct: 139 SPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFE 198
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ +GV+ ++ +YN L+ C G LA +++ E+ +K + + TY+ ++
Sbjct: 199 LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI----SKRGVACNAVTYNILI 254
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + E M A + P T T++ L++ N G +++A+ E++ G
Sbjct: 255 GGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLC 314
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQ 488
P NIL+ SK GN+ +S + E +D+
Sbjct: 315 PTLVTYNILISG------------------FSKV---------GNSSVVSELVREMEDR- 346
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
P+ TY ILM D + + + M+ +GL P
Sbjct: 347 ---------------------GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP 385
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ +LI GN+ A ++ K M E + P+ V Y T I + +A
Sbjct: 386 DQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFL 445
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
EEM + PN+ +YI+ ++ + G E ++ L ++M +AG K ++
Sbjct: 446 EEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL---KEMTEAGLKPPES 493
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 53/267 (19%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++INA + L+EQ++ F+ M+ G P+S N L ++ DR + F + L
Sbjct: 43 AVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LG 101
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+TQ FD ++ I +
Sbjct: 102 RTQ---------------------------------------FD--------VYSFGITI 114
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA C + K L+ +M T+G+SPN +TILI+AC +G+++ A + M + G++
Sbjct: 115 KAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLA 174
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ YT I + K F L+++MK + PNL TY +L+ R G L
Sbjct: 175 ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL---SLA 231
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWC 667
V+ ++ K G N LI C
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLC 258
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + ++ + + LMN V + D++ E++ M+++G++ D +Y +L+ C+ G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 339 NTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N V A ++Y + HL+ V+ Y+T++ + ALK E+M+ GVTP
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVI------YNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
N ++ S I G +A L +EM +AG +P C+ + QA
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 35/408 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ G +KSR + +I+ FN L++ A KF L + + MQ+LG+
Sbjct: 68 DAIGLFGGMVKSRPL----------PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D AF L +K + + Y D + H+D +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANV-VIYSTVIDSLCKYRHEDDAL----------NL 282
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ + + +P TY+ L+ +C +Y R L+++M ++PN +++ LIDA
Sbjct: 283 FTEMENK-GVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
VTY TL+ + + + + ++++M + G N LI +
Sbjct: 401 VTYNTLING---FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 35/369 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G ++ +Y +++ C G+ LA + + +EA + + +V YST++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLA---FNLLNKMEAAKI-EANVVIYSTVIDSLC 271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ AL + +M + GV PN IT+SSLI+ N A L +M++ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N L+ A V+ + A +L YD R + + S+ N
Sbjct: 332 TFNALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 373
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TYN L+ C R+ L EM GL
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK-AKRIDEGVELFREMSQRGLV 432
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M DG+ P+++ Y T + ++ +L++A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE ++ +++P + TY ++ + G +V+ ++ + G K + +I
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 666 WCEGVIQDK 674
+C ++++
Sbjct: 550 FCRKGLKEE 558
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 26/371 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + N+ +++++++ L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV ++ +Y+ L+ C A + ++ +E K + +V T++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--IERK--INPNVVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ +A + D LFR +S+ + GNT + + H Q+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFRE--MSQRGLV------GNTVTYTTLIHGFFQA 448
Query: 490 IT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ V S P TYN L+ C + KA++ ++ + P
Sbjct: 449 RDCDNAQMVFKQMVSD-----GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ I+I+ +G VE + + G+ PDV+ Y T I R ++A +LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 607 EEMKHYQIQPN 617
+M+ P+
Sbjct: 564 RKMREDGPLPD 574
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M R +L + V V N L DL F L M+ + A++ Y+ +
Sbjct: 214 DRMVQRGCQPNLVTYGV-----VVNGLCKRGDIDLAFNL--LNKMEAAKIEANVVIYSTV 266
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ + C + A ++ E +E KGV + +V TYS+++ + + W A ++ DM+
Sbjct: 267 IDSLCKYRHEDDALNLFTE---MENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ PN +T+++LI+A G + +A L++EM++ +P+ + L+ + D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F ++ + +D N + + N K K+ F S
Sbjct: 383 EAKHMF--------ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++ TT + C + + + +M + G+ PN +++ L+D +G +E A
Sbjct: 435 TVTY--TTLIHGFFQARDCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + + ++ M P + Y I+ ++ +++ + LF + ++P+++ Y T++
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G E A+++ M + G
Sbjct: 550 FCRKGLKEEAD---ALFRKMREDG 570
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 383
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+ C A E++ E+ G + TY+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG----NTVTYT 439
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T+++L++ G +E+AM +FE + ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
EP NI+++ +A + + + LF S +L +
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 29/313 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+F ++ ++ A K + + + + E M G++ N T++ LIN + A+ L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EP+ + LL + R+ + L V +G Y +T + +
Sbjct: 145 KMMKLGYEPSIVTLSSLLNG------YCHGKRISDAVALVDQMVEMG--YRPDTITFTTL 196
Query: 483 EH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
H K +++ V +P TY +++ C D
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRG----------CQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+N+M + N + ++ +ID+ + + AL + M G+ P+V+ Y++ I
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+R A L +M +I PN+VT+ L+ A + G L E ++ +Y +M K
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK---LYDEMIKRSIDP 363
Query: 655 NDTYLKELIEEWC 667
+ LI +C
Sbjct: 364 DIFTYSSLINGFC 376
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 45/251 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIY 279
+ F + F K+ LV A + YD K P+++ ++I+ G C D + +++ ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMF 388
Query: 280 EDLRSQNVTLNIYVFNSLMN-------------------------------------VNA 302
E + S++ N+ +N+L+N A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D V+K M GV ++ +YN LL C G A ++ ++L+ + ++
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF---EYLQ-RSKMEPT 504
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++TY+ +++ A + + + GV P+ I ++++I+ GL E+A LF
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 423 EMLQAGCEPNS 433
+M + G P+S
Sbjct: 565 KMREDGPLPDS 575
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 60/405 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y +S E + + T ++ + L+ N+ ++ V + +++ G D+ +Y
Sbjct: 83 GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAY 141
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ A A + + ++++G L DV TY+ ++ F +AL++ E
Sbjct: 142 NALISGFIKANQLENANRV---LDRMKSRGFLP-DVVTYNIMIGSFCSRGKLDLALEIFE 197
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
++L P IT++ LI A G ++ AM L +EML G EP++ N +++ +
Sbjct: 198 ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEM 257
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D+AF L RS +
Sbjct: 258 MVDKAFELLRSLSSRGC------------------------------------------- 274
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP TYNIL++ + + + L++EM ++G PN ++ +ILI G VE
Sbjct: 275 ----KPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +L+ M+E G+ PD Y I R RL A E M P++V Y T++
Sbjct: 331 EAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIM 390
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEG 669
R G + Q L V++ + + G N + L W G
Sbjct: 391 AGLCRTG---KADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 28/442 (6%)
Query: 196 RIVQLCVNKPDVNLAIRYACIVPR---ADILFCN-FVREFGKKRDLVSALRAYDASKKHL 251
++++ N ++ A R I+ R D+ N + F K L +A R D K
Sbjct: 109 KLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I G + I+E+L N + + L+ D + +
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAM 228
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ D +YN +++ C ++ + + ++ L ++G K D+ TY+ +
Sbjct: 229 KLLDEMLSKGLEPDTLTYNAIIRGMC---KEMMVDKAFELLRSLSSRGC-KPDIITYNIL 284
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ W K+ +M+S G PN +T S LI G VE+A++L M + G
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P++ C + L+ + D A F + +S + +Y+ + D+
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATE-FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA- 402
Query: 490 ITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
F+K P ++YN L A + D YR ++ ++ G+
Sbjct: 403 ------------LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++ LI G V+ A+++L M+ P+VV+Y + + R A +
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEV 510
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
M QPN TYI L+
Sbjct: 511 LAAMTEKGCQPNETTYILLIEG 532
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D L F RE + DL + Y S L P++ TI+ G+C G ++ +
Sbjct: 352 DPLIAGFCRE--GRLDLATEFLEYMISDGCL--PDIVNYNTIM--AGLCRTGKADQALEV 405
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E L N+ +N+L + ++ D LE+ + G+ D +YN L+ C
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCR 465
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E+ +++ G + +V +Y+ I+ A++V M G P
Sbjct: 466 DGMVDEAIELLVDMQ----SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQP 521
Query: 397 NTITWSSLINACANAGLVEQAMHL 420
N T+ LI +GL +AM L
Sbjct: 522 NETTYILLIEGIGFSGLRAEAMEL 545
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 205/455 (45%), Gaps = 42/455 (9%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICR-----TIIDVCGICGDYMKSRAIYED 281
FV+ G++ AL ++ +KH + + R +I+ V G + ++E
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKH----DCFKLRGVATASILSVLGNHEQLPAALELFES 202
Query: 282 LRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
L+ ++ +L++Y + SL+++ + +F + +++ MQ+ G + +YN++L G
Sbjct: 203 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 262
Query: 339 NTV-LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ Q ++ E+K LE + D +TY+T++ Q AL++ ++M AG PN
Sbjct: 263 DSWDRIQSLFQEMKDLE----ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 318
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L++ G+ ++A L EM AG PN N L+ A A D A L +
Sbjct: 319 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 378
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S LSK Y + E +K T T ++ + P T
Sbjct: 379 SL-LSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM-----------RKTNCTPNIVT 426
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEGALQIL 571
YNIL+ Y R++ L + M+ +P+ ++W L+ + G G + +
Sbjct: 427 YNILIDI----YGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 482
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ G P V + I+ R + + +++ + +QP + T+ L+ + +R
Sbjct: 483 REMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLARE 542
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G QQC V Q+M +AG + +D LI +
Sbjct: 543 GRW---QQCEKVSQEMAEAGLQLSDACHAGLIHSY 574
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 197/469 (42%), Gaps = 67/469 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG---ICGDYMKSRA 277
+ +C + F + AL + +K +PN+ +ID+ G D MK
Sbjct: 389 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMK--- 445
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ ++ +N T ++ +NSL+ N L V++ M++ G M + ++NIL++
Sbjct: 446 VFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYG 505
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +IY K L G L+ V T++ ++ A WQ KV ++M AG+
Sbjct: 506 RCGYVDYSVDIY---KGLLRTG-LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQ 561
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ--CCNILLQACVEACQFDRAF 453
+ + LI++ AN+G Q +E+ ++ +P S C +L C C D
Sbjct: 562 LSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYC--KCGMD--- 616
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++ Q+AL + YD N H P
Sbjct: 617 --------NEAQLALNQLYD-------------------------NGH----------SP 633
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+N ++ C + R L+ E+R L P+ +++ L+ G G A +++
Sbjct: 634 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVM 693
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
MR G +P+++ Y T + + R+ A +F +M +++P+ T+ TL+ Y
Sbjct: 694 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV---GSY 750
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
SL ++ L+V + M + G + K L++ + + + G+
Sbjct: 751 SSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPSRKKPGGD 799
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 164/397 (41%), Gaps = 90/397 (22%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY NM+K GV ++ +YN+L++A C A+++ E+ KG DV TY+TIV
Sbjct: 150 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMAR---KGCPPDDV-TYATIV 205
Query: 371 KVF----------------------------ADAKWWQM--ALKVKEDMLSAGVTPNTIT 400
V A + ++M V DM+ G+ PN IT
Sbjct: 206 SVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 265
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++++A AG + A + M+ GC PN L++ + + A ++R W
Sbjct: 266 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR-WM 324
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+++ + P+T +YNI
Sbjct: 325 VAE----------------------------------------------GWAPSTVSYNI 338
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L++ C+ D +++N M G PN +++ LID +G++ GA+ I M G
Sbjct: 339 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 398
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
P+VV YT + V + QA SL ++M PN VT+ TL+R+ V
Sbjct: 399 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC---DCRRVG 455
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
+ L V+ +M + G N ELI G+ ++ N
Sbjct: 456 RALGVFHEMRRHGCVPNGRTYNELI----HGLFREGN 488
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 26/384 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFT 308
PN+ TI+D G+ + AI + T N+ F +L+ + HD
Sbjct: 261 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD---A 317
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ M G SYNIL++ C G+ A I + +E G +V TYST
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI---LNSMEQHGCFP-NVRTYST 373
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F+ A A+ + DM +G PN + ++++++ + QA L ++ML
Sbjct: 374 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 433
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ N L+++ + + RA +F V G Y+ +
Sbjct: 434 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC-VPNGRTYN-----------ELIH 481
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ N H + + + + TYN ++ C +A++ +M G+ P
Sbjct: 482 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 541
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +I A G V A +L M +++ YT + +L A +
Sbjct: 542 NAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYL 601
Query: 607 EEMKHYQIQPNLVTYITLLRARSR 630
+M + I PN VT+ L+R R
Sbjct: 602 LKMLYEGIYPNTVTWNVLVRGVFR 625
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 205/524 (39%), Gaps = 79/524 (15%)
Query: 163 QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV----NKPDVNLAIRY----- 213
+RL +G+V+ G+ L+E RL E + + PD L Y
Sbjct: 63 RRLAAAGDVD---GVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 119
Query: 214 -ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
C P L+ + + ++ + + + YD +K PN++ ++
Sbjct: 120 LGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 179
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+R + +++ + + + ++++V L EV M + ASYN +
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA-----ASYNAI 234
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C QE++ V + +G L+ +V TY+TIV F A +MA + M+
Sbjct: 235 VLALC---REFRMQEVFSVVSDMVGRG-LQPNVITYTTIVDAFCKAGELRMACAILARMV 290
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEML------------------------- 425
G TPN +T+++L+ + G V A+ ++ M+
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 350
Query: 426 ----------QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
Q GC PN + + L+ +A A ++ + S + N
Sbjct: 351 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP--------N 402
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVK 533
+NM + + + N S DK + P T T+N L+++ C D RV
Sbjct: 403 VVVYTNMVDVFCKKL------MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC-DCRRVG 455
Query: 534 ---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ +EMR G PN ++ LI GN AL ++ M+ G+ +V Y T +
Sbjct: 456 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 515
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+++ ++A +M IQPN T+ ++ A + G +
Sbjct: 516 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 559
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++DV C M +++++ +
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV--FCKKLMFNQAKSLIDK 428
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ + + L V+ M++ G + + +YN L+ GN
Sbjct: 429 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 488
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + V +++ G+ +L + TY+T+V + + A+ M+ G+ PN
Sbjct: 489 CGDALHM---VTEMQSHGI-ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 544
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S++I+A G V A + M C N IL+ E C D+
Sbjct: 545 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM---AELCNQDK 593
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L + MQ G+ + +YN ++ C
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC---Q 520
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T +++E V + +G+ + + FT+S I+ + +MA + M N +
Sbjct: 521 TRMSREAMVFVGKMIVQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 579
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ------ACVEACQF 449
++ L+ N + AM +ML G PN+ N+L++ C+E F
Sbjct: 580 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDF 635
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA V + + MR+DG+ P+V Y ++ ++ R+ A + +EM
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
P+ VTY T++ + L E + LA + A Y A
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV-AASYNA 233
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-QPNVITHNI 326
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + + DRA +E+ D
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRA-----------------------------IEYLDI- 416
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
V Y P TYN L+ A C D A ++N++ + G SP
Sbjct: 417 -------MVSRGCY----------PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G E A+++L MR G+ PD++ Y++ + R ++ +A F
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ I+PN +TY +++
Sbjct: 520 HDLEGLGIRPNAITYNSIM 538
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 40/436 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+++ G + D+ +YN+L+ C +G EI ++ L+ V DV TY+TI++
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSG------EIDNALQVLDRMNVAP-DVVTYNTILRTLC 227
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + L P+ IT++ LI A V QAM L +EM G +P+
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 287
Query: 435 CCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTDRISN 481
N+L+ + + D A + + + ++ + G D +S+
Sbjct: 288 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK-LLSD 346
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K P + +YN L+ C +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++ Y T
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + ++A L +EM+ ++P+++TY +L+ SR G +V + + + D+
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG---KVDEAIKFFHDLE 523
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN-SQRPQSLLLEKVAVHLQKS 707
G + N ++ C+ D+ + + +R ++ ++L+E +A
Sbjct: 524 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 583
Query: 708 AAENLAIDL--RGLTK 721
A +L +L RGL K
Sbjct: 584 EALDLLNELCSRGLVK 599
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 282 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 341
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 342 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 456
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 457 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 560
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G MK + +++R++ ++ +N L+N L ++ NM G ++ ++
Sbjct: 268 GQAMK---LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 324
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+L++ C G + A+++ ++ KG V T++ ++ A+ + E
Sbjct: 325 NIILRSMCSTGRWMDAEKLLSDMLR---KGC-SPSVVTFNILINFLCRQGLLGRAIDILE 380
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G TPN+++++ L++ +++A+ + M+ GC P+ N LL A +
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440
Query: 448 QFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----ISNMEHKD-KQSITNTP 494
+ D A + + ++ V G G T+R + M K K I
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500
Query: 495 NFVPN-SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ V S D+ F +P TYN +M C +A+ + M +
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
P ++TILI+ G + AL +L + G+ A A+K+
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 489
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 490 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEG 575
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 177/431 (41%), Gaps = 59/431 (13%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
A A + SP + ++D C + A + L + +NI + N L+
Sbjct: 98 ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFC 157
Query: 301 NAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A L++ +LG + D+ SY+ILLK+ C G + A ++ + E V
Sbjct: 158 EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA--EGGAVC 215
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV YST++ F A + ++M+ G+ P+ +T+SS+++A A +++A
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M+ G PN+ N L+ Q+ A R+F+
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-------------------- 315
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
+R S P T ++LM + C Y ++K +
Sbjct: 316 ---------------------------RRHSILPDVVTLSMLMGSLCK-YGKIKEARDVF 347
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G +PN S+TI+++ G + + +M DG++PD+ + IK
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
L +A +F EM+ + ++P++VTY T++ A R G + + + + M G +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME---KFNQMIDQGVAPDK 464
Query: 657 TYLKELIEEWC 667
LI+ +C
Sbjct: 465 YAYHCLIQGFC 475
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A + ++ V N + +N+L+ + K + V+K M++ ++ D+ + ++L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G A++++ + KG +VF+Y+ ++ +A + + ML
Sbjct: 332 GSLCKYGKIKEARDVF---DTMAMKGQ-NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ T++ LI A AN G++++AM +F EM G +P+ ++ A + D
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQS-ITNTPNFVPNSHYSS--- 504
A F ++ + A G S ++ K+ S I N + +SS
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 505 --------------FD--KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
FD PT Y++LM C KAL + M + G+ P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + + L++ G ++ L + + M + G+ P + Y I + R A F
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
EM I N TY +LR
Sbjct: 628 HEMTESGIAMNKCTYNIVLRG 648
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 160/402 (39%), Gaps = 86/402 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++Y +I CG K+ I+ ++R V ++ + +++ K +E
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------ 352
+ M GV D +Y+ L++ C G+ + A+E+ E+ +
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 353 -----LEAKGVLKLDV--------FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++A+ + L V YS ++ + + AL+V + M+SAG+ PN +
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +L+N G +++ + LF EMLQ G +P++ NI++ EA + A F
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T ++ +A+ + TYN
Sbjct: 631 T--ESGIAMNK---------------------------------------------CTYN 643
Query: 520 ILMKAC----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
I+++ C D L E+R + + N I+ +I + VE A + +
Sbjct: 644 IVLRGLFKNRCFD--EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ P VV Y+ I ++ +++A +F M++ +P+
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 161/372 (43%), Gaps = 31/372 (8%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ +++K M + G+ D +Y+ ++ A C A A+ ++ + KGVL +
Sbjct: 234 DVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF---LRQMVNKGVLP-NN 289
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+ ++ ++ W+ A++V ++M + P+ +T S L+ + G +++A +F+
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRA--FRLFRSWTLSKTQVALGEDYDGNT--DR 478
M G PN I+L + C D F L ++ + Y N
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP------DIYTFNVLIKA 403
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
+N DK I + KP TY ++ A C A+
Sbjct: 404 YANCGMLDKAMIIFNEM-----------RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G++P+ ++ LI G++ A +++ + +GM D+V +++ I +
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R+ A ++F+ + + P V Y L+ Y + ++++ L V+ M AG + ND
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG---YCLVGKMEKALRVFDAMVSAGIEPND 569
Query: 657 TYLKELIEEWCE 668
L+ +C+
Sbjct: 570 VVYGTLVNGYCK 581
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 166/417 (39%), Gaps = 33/417 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + ++ +++++R ++ ++ + LM +K +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G ++ SY I+L G V +++ L + D++T++ ++K
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF----DLMLGDGIAPDIYTFNVLIK 402
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A+ A+ + +M GV P+ +T+ ++I A G ++ AM F +M+ G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISN-MEHKDKQ 488
+ + L+Q +A L + + N ++ M+ ++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 489 SITNTPNFVPNSHYSS------------------FDKRFS--FKPTTTTYNILMKACCTD 528
+T P + S FD S +P Y L+ C
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK- 581
Query: 529 YYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
R+ +L EM G+ P+ I + I+ID +G A M E G++ +
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Y ++ +++ +A LF+E++ ++ N++T T++ + + E + A
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFA 698
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 53/279 (18%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++P + T++ L++ C A E A+ F ++L+ G N N LL+ EA + D A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + TP P
Sbjct: 167 DIL---------------------------------LHRTP-------------ELGCVP 180
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQ 569
+Y+IL+K+ C +A L+ M G SP+ ++++ +ID G+V A
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD 240
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G+ PD V Y++ + +++ + +A + +M + + PN TY L+
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG-- 298
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y S + ++ + V+++M + + L L+ C+
Sbjct: 299 -YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 29/263 (11%)
Query: 216 IVPRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYIC 259
++ +A I+F N +R+ G K D+V+ A+ ++ +P+ Y
Sbjct: 409 MLDKAMIIF-NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKN 314
+I G C G +K++ + ++ + + L+I F+S++N N L ++ ++
Sbjct: 468 HCLIQ--GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN-NLCKLGRVMDAQNIFDL 524
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+G+ Y++L+ CL G A ++ + + G+ DV Y T+V +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF---DAMVSAGIEPNDV-VYGTLVNGYC 580
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
L + +ML G+ P+TI ++ +I+ AG A F EM ++G N
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640
Query: 435 CCNILLQACVEACQFDRAFRLFR 457
NI+L+ + FD A LF+
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFK 663
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
ALR +DA PN + T+++ G C G + +++ ++ + + + ++N +
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVN--GYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 298 MNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ + T+ + M + G+ + +YNI+L+ L N + I+ K L
Sbjct: 611 ID-GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG--LFKNRCFDEAIF-LFKELR 666
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A V K+++ T +T++ + + A + + +G+ P +T+S +I GLV
Sbjct: 667 AMNV-KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
E+A +F M AGCEP+S+ N +++ ++ + RA
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 190/491 (38%), Gaps = 68/491 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + L +D K SP++ C I+ + K+ +Y + +
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L++ ++ L++ MQ+ G + +YN+L+ G A+ + G
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ K LK+ +TY+ ++ + + AL ++E+M+ G +P T++S I
Sbjct: 294 EM----LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQ 465
G + AM +ML P+ N L+ +AF LF RS L T
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409
Query: 466 VALGEDYDGNTDRISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V DG R +E + K + N P TY IL+
Sbjct: 410 VTYNTLLDGLC-RQGELEVAQQLKVEMINE----------------GIAPDIVTYTILVN 452
Query: 524 ACCT-------------------------------------DYYRVKALMNEMRTVGLSP 546
C D R +L EM G P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +++D GN+E A ++L+ M DG+ PD V YT+ I + + RL++ +F
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EM + P++VTY L+ + G L ++ + +M + G N LI
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRL---ERAFIYFSEMQEKGILPNVITYNSLINGL 629
Query: 667 CEGVIQDKNQN 677
C+ D+ N
Sbjct: 630 CKVRRMDQAYN 640
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 37/346 (10%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ D+ SYN L+ C GN + A ++ E++ + L + TY+T++
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI----YLFPTIVTYNTLLDGLCRQGEL 425
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++K +M++ G+ P+ +T++ L+N G + A F+EML G E +S
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 440 LQACVEACQFDRAFRL--------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ ++ RAF L F + V G GN + S + K S
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK-MVSDG 544
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
P++V TY ++ A + + + + EM + GL+P+ +
Sbjct: 545 VIPDYV-------------------TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T+LI G G +E A M+E G+ P+V+ Y + I + +R+ QA++ F EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I PN +Y L+ G+ Q+ L++Y+ M G + +
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNW---QEALSLYKQMLDRGVQPD 688
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 26/335 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ MK+ ++++LRS + I +N+L++ +L+ ++ M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y IL+ C G+ +AQE + E+ H +G L+LD + Y+T ++ + K
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLH---EG-LELDSYAYAT--RIVGELKLGD 494
Query: 381 M--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++E+ML+ G P+ I ++ +++ G +E+A L ++M+ G P+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ A +E + + +F LSK G T + H K + F+
Sbjct: 555 IIHAHLENGRLRKGREIFYE-MLSK-----GLTPSVVTYTVLIHGHAGKGRLERA--FI- 605
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
++S ++ P TYN L+ C +A EM G+ PN S+TILI+
Sbjct: 606 --YFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GN + AL + K M + G+ PD ++ +K
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 242 RAYDASKKHLS---SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+ ++ L+ P++ I ++D G+C G+ ++ + + + S V + + S
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVD--GLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ + + L+ E++ M G+ + +Y +L+ G A + E ++
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE---MQ 611
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG+L +V TY++++ + A +M+ G+ PN +++ LIN N G
Sbjct: 612 EKGILP-NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
++A+ L+++ML G +P+S + LL+ + C+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 177/430 (41%), Gaps = 76/430 (17%)
Query: 270 GDYMKSR-----AIYEDLRSQNVTLNIYVFNSLM------NVNAHDLKFTLEVYKNMQKL 318
G +M R A +D+R + ++ +N ++ N +A+ L+ +E +K M+
Sbjct: 111 GFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKAS 170
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV D+ SY+ILL A +G A ++ + D+ TY+ ++ +
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALFSAM-------TCSPDIMTYNVLMDGYCKIGQ 223
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +++L AG PN T+S +IN VE+A +F +M+++ C PN+ N
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ +A + A +LF + ME
Sbjct: 284 LIAGFCKAGMLEDAIKLF-----------------------AEME--------------- 305
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKALMNEMRTVGLSPNHISWTILI 555
+ K T TYN L+ + C Y L N++ GL+P +++ LI
Sbjct: 306 ---------KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ + A+Q M E +P+V+ Y+ I + +R+K+A E+MK +
Sbjct: 357 QGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKN 675
P +VTY L+ + G E++ L ++ M AG N LI+ C+ +
Sbjct: 416 PTVVTYGGLINGFCKCG---ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKA----ER 468
Query: 676 QNQGEVTLCR 685
N G LC
Sbjct: 469 ANDGLRLLCH 478
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 159/380 (41%), Gaps = 42/380 (11%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
MK+ + DL S ++ L+ + M AH L + D+ +YN+L+
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRM-AEAHAL---------FSAMTCSPDIMTYNVLMD 216
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G T AQ + E+ K + +VFTYS I+ + + A +V M+ +
Sbjct: 217 GYCKIGQTYEAQSLMKEI----LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDR 451
PN +T+++LI AG++E A+ LF EM + GC+ N L+ + C +
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 452 AFRLF---RSWTLSKTQVALGEDYDGNTD--RISN-MEHKDKQSITNTPNFVPNS----- 500
A LF L+ T V G D R+S M++ D+ PN + S
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDG 392
Query: 501 ---------HYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
+ + K + PT TY L+ C AL+ +M+ G +PN
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + LID + L++L M +G PDV+ Y I + R++ A LF+
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M PN+ T+ L+R
Sbjct: 513 GM---ACAPNVTTFNFLIRG 529
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 36/342 (10%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+ +++ F A+ V DM S+G+ PN T ++L+ G +
Sbjct: 26 GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 85
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG------- 469
A+ LF EM P S NILL+ A + A + S + VA G
Sbjct: 86 ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145
Query: 470 ----EDYDGNTDRISNMEHKDKQSITNTPNF---------------VPNSHYSSFDKRFS 510
E+ N + K+ ++ P+ + +H + +
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH--ALFSAMT 203
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN+LM C Y ++LM E+ G PN +++I+I+ VE A
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA- 627
++ M E P+ V + T I ++ L+ A LF EM+ + +VTY TL+ +
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323
Query: 628 -RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ R G V + ++ + AG LI+ +C+
Sbjct: 324 CKKRGG----VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCD 361
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 31/320 (9%)
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ AL++ +++L+ PN T++ LI G + QA+ +F +M +G PN+
Sbjct: 10 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 69
Query: 436 CNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNT-DRISNMEHKD 486
N LL E Q A +LFR + S + G G D +++++
Sbjct: 70 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMR 129
Query: 487 KQS---ITNTPNFV------PNSHYSSFDKRFSF---------KPTTTTYNILMKACCTD 528
K S T T N V N + ++ F +P +Y+IL+ A +D
Sbjct: 130 KSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSA-LSD 188
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
R+ + SP+ +++ +L+D G A ++K + + G P+V Y+
Sbjct: 189 SGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 248
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + ++++A+ +F +M PN VT+ TL+ + G L + + ++ +M
Sbjct: 249 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA---IKLFAEME 305
Query: 649 KAGYKANDTYLKELIEEWCE 668
K G KA LI+ C+
Sbjct: 306 KIGCKATIVTYNTLIDSLCK 325
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFT 308
PN T+I G C M AI + ++ I +N+L++ +
Sbjct: 276 PNAVTFNTLI--AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ ++ G+ + +YN L++ C A A + + E++ G +V TYS
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-----GKCAPNVITYSI 388
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K EDM + G TP +T+ LIN G ++ A+ FE+M AG
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF 456
C PN+ N L+ +A + + RL
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLL 476
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKS 275
VP A + F + F K L A++ + +K + T+ID +C G +
Sbjct: 275 VPNA-VTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ L +T I +NSL+ +A L ++ + M+ ++ +Y+IL+
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDG 392
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +E ++ ++A G V TY ++ F + AL E M AG
Sbjct: 393 LC---KVRRMKEAAKTLEDMKAHGYTP-TVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PNT+ +++LI+ A + L M GC+P+ N L+ A + + A
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508
Query: 454 RLF 456
RLF
Sbjct: 509 RLF 511
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 49/225 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRA-IY 279
+ + + ++ F R L A++ +D + +PN+ +ID G+C MK A
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILID--GLCKVRRMKEAAKTL 406
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
ED+++ T + + L+N +LK L ++ M+ G A
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC----------------A 450
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
NTV+ ++T++ A+ L++ M + G P+
Sbjct: 451 PNTVI-----------------------FNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
IT++ LI+ +A VE A LF+ M C PN N L++
Sbjct: 488 VITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRG 529
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 56/348 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++K+M+ +G D ++N+LL +G E+Y E+ K D TY+ +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP----DAITYNIV 864
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + AL D++S+ P T+ LI+ A G +E+AM LFEEM GC
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN NIL+ + + A +LF+ R+ N
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFK--------------------RMVNE------- 957
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+P +Y IL+ C +AL NE+++ GL P+
Sbjct: 958 --------------------GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +I+ G S +E AL + MR G+ PD+ Y + + + ++QA ++E
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
E++ ++P++ TY L+R Y + VY++M G N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG---YSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 211/514 (41%), Gaps = 84/514 (16%)
Query: 225 CNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CNF+ EF + D V + A ++ +K + ++ TI I G + + +R
Sbjct: 125 CNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LN Y +N L++ + + LEVY+ M G+ + +Y+ L+ A G
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKKR 241
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ + +K +E G L+ +V+T++ ++V A A ++ M G P+ +T+
Sbjct: 242 DSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300
Query: 402 SSLINACANAGLVEQAMHLF-----------------------------------EEMLQ 426
+ LI+A NAG +E A LF +M
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISN 481
G P+ IL+ +A FD AF F + + Q L + NT R
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATF---DVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 482 MEHKDKQSITNTPNFV---PNSH-YSSFDKRFS--------------FKPTTTTYNILMK 523
+E D + +T V P ++ Y +F F K NI+
Sbjct: 418 IE--DALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIV-- 473
Query: 524 ACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
AC Y + K + N +R GL+P+ +++ +++ G V+ A+ +L M
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+G PDV+ + I ++ R+ +A+ +F+ MK ++ P +VTY TLL + G
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG-- 591
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
VQ+ + +++ M N L++ +C+
Sbjct: 592 -RVQKAIELFESMIXKKCSPNTISFNTLLDCFCK 624
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + + + A + +DM + G P+ T++ L+ +G + + L++EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
+ C+P++ NI++ + ++ D+A F S T G DG ++
Sbjct: 850 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG-LAKVGR 908
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+E + F S Y KP +NIL+ D L M
Sbjct: 909 LEEAMRL-------FEEMSDYGC-------KPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL+D +G V+ AL ++ G+ PD +AY I +S+R+
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++A +L+ EM++ I P+L TY +L+ G V+Q +Y+++ AG + +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM---VEQAKRMYEELQLAGLEPD 1067
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 183/445 (41%), Gaps = 91/445 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F V K RD A +D +K PN++ T+I CG+
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGL------------- 412
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ A ++ L++ M+ +GV +Y + +G T
Sbjct: 413 ------------------LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETG 454
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E + ++K AKG++ ++ + + A+ + A + + G+ P+++T+
Sbjct: 455 KAVETFEKMK---AKGIVP-NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ + G V++A++L EM++ GCEP+ N L+ + +A + D A+++F
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF----- 565
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
DR+ +M+ PT TYN L
Sbjct: 566 ---------------DRMKDMK---------------------------LSPTVVTYNTL 583
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + KA L M SPN IS+ L+D + VE AL++ M
Sbjct: 584 LSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV+ Y T I ++ ++ AF F ++K + P+ VT TLL + G ++
Sbjct: 644 KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCG---QIGD 699
Query: 640 CLAVYQD-MWKAGYKANDTYLKELI 663
+++ +D M++ ++ N ++ ++L+
Sbjct: 700 AISIARDFMYQVRFRVNRSFWEDLM 724
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 22/322 (6%)
Query: 336 LAGNTVLAQEIYGEV---KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
L G T++ E+ + + L G+ + D F +V+V K A ++ +
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIFDKFTKK 781
Query: 393 -GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G++P +++ LI E+A LF++M GC P++ N+LL ++ +
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F L++ + + D T I ++ +F + S F
Sbjct: 842 LFELYKEMISRRCKP------DAITYNIVISSLAKSNNLDKALDFFYDLVSS------DF 889
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT TY L+ A L EM G PN + ILI+ G G+ E A Q
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M +G+ PD+ +YT + + R+ +A F E+K + P+ + Y ++
Sbjct: 950 LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING-- 1007
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G +++ LA+Y +M G
Sbjct: 1008 -LGKSQRMEEALALYNEMRNRG 1028
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 190/474 (40%), Gaps = 45/474 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ F+ FGK + A+ ++ K PN+ C + G +++ ++ LR
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +N +M + + + + M + G D+ N L+ + AG
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ +K ++ L V TY+T++ Q A+++ E M+ +PNTI++
Sbjct: 560 EAWQMFDRMKDMK----LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
++L++ VE A+ +F +M C+P+ N ++ ++ + + AF W
Sbjct: 616 NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-----WFF 670
Query: 462 SKTQVALGEDYDGNTDRISNM----EHKDKQSITN----TPNFVPNSHY----------- 502
+ + ++ D+ + + + D SI F N +
Sbjct: 671 HQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730
Query: 503 SSFDKRFSFKPTTTTYNI---------LMKACCT---DYYRVKALMNEMRTVGLSPNHIS 550
+ DK F I L++ C + Y + + +G+SP S
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI E A + K M+ G +PD + + V +S ++ + F L++EM
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +P+ +TY ++ + ++ +L + L + D+ + ++ LI+
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNL---DKALDFFYDLVSSDFRPTPRTYGPLID 901
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 188/459 (40%), Gaps = 47/459 (10%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ L C +R G+ D AL+ D + P Y T ID G G+ K+ +E
Sbjct: 406 NTLICGLLRA-GRIED---ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE 461
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ + NI N+ + A L+ ++ +++ G+ D +YN+++K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA----KWWQMALKVKEDMLSAGV 394
A + E+ + + DV ++++ A + WQM ++K+ LS
Sbjct: 522 QVDEAVNLLSEM----IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS--- 574
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +T+++L++ G V++A+ LFE M+ C PN+ N LL + + + A +
Sbjct: 575 -PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALK 633
Query: 455 LFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVP 498
+F T L+ V G + + H+ K+S+ T P V
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVK 693
Query: 499 NSHYS-------SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHI 549
F + F+ + + LM + KA++ E+ G+
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753
Query: 550 SWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
L+ A QI K ++ G+SP + +Y I + ++A+ LF++
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK+ P+ T+ LL + G + E+ +Y++M
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITEL---FELYKEM 849
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + +GK D +A + + P++ ++D + G ++ + +L
Sbjct: 930 IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + +N ++N + ++ L +Y M+ G++ D+ +YN L+ LAG
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ +Y E L+ G L+ DVFTY+ +++ ++ ++ + A V ++M+ G PN T
Sbjct: 1050 EQAKRMYEE---LQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 401 WSSLIN 406
++ L N
Sbjct: 1106 YAQLPN 1111
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
++ ++N+MR G N S+ LI SG AL++ + M +G+ P + Y+ +
Sbjct: 175 QMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALM 234
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + + L +EM+ ++PN+ T+ +R R G + E + +++ M
Sbjct: 235 VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE---IFRRMDDE 291
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLL 696
G + LI+ C + +N E+ + + N +P ++
Sbjct: 292 GCGPDLVTYTVLIDALCNA---GQLENAKELFVKMKANGHKPDQVI 334
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 197/457 (43%), Gaps = 38/457 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G A ++ E+ KG+ + V+TY+ +
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE---KGI-EPTVYTYTLPIT 311
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 489
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +LK M E G +P+V
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 606
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
DM K N LI C+ D+ + E+
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI 643
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 171/440 (38%), Gaps = 76/440 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +Y M K G++ + +YN L+ C+ G A +I+ +E G L +
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF---HWMEGHGSLA-NTQ 409
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ I+K + A+ + E ML G P +T+++LIN G V A L + M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
+ GCEP+ N L+ + + + A F+ +S T + G DG
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 477 D----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYN 519
D + ME + N V N S + RFS P TY
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVING--LSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 520 ILMKACCT------------DYYRVKALMN---------------------EMRTVGLSP 546
L+ C D + K L N M +G P
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEP 647
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ L+ G A Q++K M+E G PD Y + + ++ + A +F
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ Q +L Y L+ A + G + E Q A++ +M + + A++ L+
Sbjct: 708 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQ---ALFDNMLEKEWNADEIVWTVLV--- 761
Query: 667 CEGVIQDKNQNQGEVTLCRR 686
+G+++ +GE+ LC +
Sbjct: 762 -DGLLK-----EGELDLCMK 775
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 179/457 (39%), Gaps = 74/457 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ Y K PN +I+ + G + + I+ + N +N ++
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D++ + +++ M K+G + + +YN L+ GN A + +K +
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK----EN 472
Query: 358 VLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ D +TY+ +V F+ KW ++ A ++M+ G+ PN +++++LI+ + G V+
Sbjct: 473 GCEPDEWTYNELVSGFS--KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL--------FRSWTLSKTQVA 467
A+ L + M + GC PN + N ++ + +F A ++ ++ T +
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF------------DKRFS---FK 512
G +G T + H D + PN YSS +R S +
Sbjct: 591 DGLCRNGRTQFAFKIFH-DMEKRKCLPNLYT---YSSLIYGLCQEGKADEAERMSEIGCE 646
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN-HISWTILIDACGG--------- 560
PT TY+ L+ C +Y + L+ +M+ G P+ I +++LI C
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706
Query: 561 -------------------------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+G VE A + M E + D + +T + ++
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
L L M+ PN+ TY+ L R SR G
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 298
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R +L V+ M K G N LI C EG + +
Sbjct: 244 CRNRNL---DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 174/403 (43%), Gaps = 43/403 (10%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G+ D+ +YN LL
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV-----EMRAMGLQPDVITYNSLLNG 387
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG+ A ++G+++H L V TY+ ++ + + A ++KE+M+ G
Sbjct: 388 YCKAGSLKEALLLFGDLRH----AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ T++ L+ NA + A F+EML G +P+ N ++A + +AF
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503
Query: 454 RLFRSWTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
RL L S V DG T +++ + + + N
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN---------------- 547
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+P TY L+ A C + +M + GL+P+ +++T+ I A GN+
Sbjct: 548 -GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E+G+ P+ + Y I R+ R + A+ F EM + PN TY L+
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G+ + + Y +M + G + K L + + EG
Sbjct: 667 GNCKEGNWEDAMR---FYFEMHQNGIHPDYLTHKALFKGFDEG 706
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 30/344 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++V +DA W V +ML G+ P+ +T+++L+++ G ++ L
Sbjct: 201 DVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLL 260
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA----------LG 469
+EM +GC PN N+++ + A + LSK + L
Sbjct: 261 KEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLA 320
Query: 470 EDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTT 517
+ + D + ME++ T N + + S + +P T
Sbjct: 321 KGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVIT 380
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ C +AL+ ++R GL+P +++ ILID G++E A ++ + M
Sbjct: 381 YNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMV 440
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G PDV YT +K + L A F+EM +QP+ Y T +RA G+
Sbjct: 441 EQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGA-- 498
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQ 678
+ + + + M G ++ LI+ C+ G + D Q
Sbjct: 499 -IAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ L +M S GV P+ + ++ ++A + + EMLQ G EP+ N LL
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++ + D+ L + ++ L D N I+ + K + V
Sbjct: 245 DSFLKEGRNDKVAMLLKEME-TRGSGCLPNDVTHNV-VITGLARKG--DLEEAAEMVEG- 299
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
R S K ++ TYN L+ + KA L EM G+ P +++ +I
Sbjct: 300 ------MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGL 353
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG VE A MR G+ PDV+ Y + + ++ LK+A LF +++H + P +
Sbjct: 354 LQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTV 413
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
+TY L+ R G L E ++
Sbjct: 414 LTYNILIDGYCRLGDLEEARR 434
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + + + + M G+ +D +YNIL+
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+++ ++ H L+ D TY+ ++ + + A K +DM+S
Sbjct: 527 GLCKTGNLNDAKDLQMKMVH----NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +T++ I+A G + A F +ML+ G EPN N+L+ A + A
Sbjct: 583 GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642
Query: 453 FRLFR 457
+R F
Sbjct: 643 YRHFH 647
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 231/542 (42%), Gaps = 55/542 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLN 290
K D+ L ++ K P+++I +ID G+C G M + +++++ ++ + +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ A + + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L G + D FT+S + ++ + + AL V E + +GV N T S L+NA
Sbjct: 309 EMKDL---GFVP-DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ 465
G +E+A + + G PN N ++ A +
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 466 VA----------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
+A LGE + ++ M+ K T N + + FDK F
Sbjct: 425 LAYNCLIRRFCELGE-MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SP + +LID C G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + K M + G+ ++V Y T I + +L +A L E+ ++P++ TY
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
+L+ S YG VQ+C+A+Y++M ++G K LI + I+ + GE++
Sbjct: 604 SLI---SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Query: 683 LCRRTNSQRPQSLLLEKV----AVHLQKSAAENLAIDL----RGLTKVEARIIVLAVLRM 734
L +P L+ V AVH A NL + GL K ++L L++
Sbjct: 661 L-------KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 735 MK 736
K
Sbjct: 714 GK 715
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 24/407 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y+ + N Y C +++ G K+ I ++ + N ++N+++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ DL + M+K G+ D +YN L++ C G A++ EV ++ K
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNKMKLK 453
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV V TY+ ++ + + + ++M G PN +++ +LIN + +
Sbjct: 454 GV-SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + +M G P + N+L+ C + + AFR + ++ L Y+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL-VTYNTLI 571
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKA 534
D +S M K ++ + + R KP TYN L+ + R A
Sbjct: 572 DGLS-MTGK----LSEAEDLLLEIS------RKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM+ G+ P ++ +LI C EG ++ E + PD++ Y +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++AF+L ++M I + TY +L+ + + G L EV+ +
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 21/372 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 210
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ K A ++ ++ML+ + P+ IT+++LI+ AG E++
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ +A + A + + LG D T I
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK------DLGFVPDAFTFSI 324
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
D S + ++ D K T +IL+ A C + KA ++
Sbjct: 325 LF----DGYSSNEKAEAALGVYETAVDS--GVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
GL PN + + +ID G++ GA ++ M + GM PD +AY I+
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ A +MK + P++ TY L+ YG +E +C + ++M G N
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 658 YLKELIEEWCEG 669
LI C+G
Sbjct: 496 SYGTLINCLCKG 507
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 49/348 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+G+K + + + + PN+ T+I+ ++++ + D+ + V+
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + ++ K M K G+ ++ +YN L+ + G A+++
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ KG LK DVFTY++++ + A Q + + E+M +G+ P T+ LI+ C
Sbjct: 589 EISR---KG-LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-----FRSWTLSK 463
G +E LF EM +P+ N +L ++AF L +S L K
Sbjct: 645 TKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 464 T---QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T + LG+ G + +S+ + N +P TYNI
Sbjct: 701 TTYNSLILGQLKVGKLCEV--------RSLIDEMN------------AREMEPEADTYNI 740
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
++K C DY EM+ G L+D C G+ V G
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGF---------LLDVCIGNELVSG 779
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 189/446 (42%), Gaps = 23/446 (5%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A+ + ++ PN+ T+ID G+ G Y ++ E +
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + ++ L+ A + V K M + G ++ YN L+ + AG+
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS- 372
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L + I E+K L L L TY+T++K + + +A ++ ++MLS G N +
Sbjct: 373 -LNKAI--EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGS 429
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S+I + + + A+ EML P L+ + + +A L+ +
Sbjct: 430 FTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF- 488
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
L + + +T + + H ++ F F +YN
Sbjct: 489 -------LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGR----GFVMDRVSYNT 537
Query: 521 LMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ CC + +A M +EM GL P++ +++ILI VE A+Q + +G
Sbjct: 538 LISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG 597
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
M PDV Y+ I C +++R ++ LF+EM +QPN V Y L+ A R G L
Sbjct: 598 MIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL---S 654
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIE 664
L + +DM G N LI+
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIK 680
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 164/388 (42%), Gaps = 64/388 (16%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L+
Sbjct: 459 SPGGGLLTTLIS--GLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC GN L E + + + KG LK D +TYS
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCC--GNKKL-DEAFMFMDEMVKKG-LKPDNYTYSI 572
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ + + A++ D G+ P+ T+S +I+ C A E+ LF+EM+
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L+ A + R+ RL + L + +M+HK
Sbjct: 633 LQPNTVVYNHLIGA------YCRSGRLSMALELRE-----------------DMKHK--- 666
Query: 489 SITNTPNFVPNSH-YSSFDKRFS-------------------FKPTTTTYNILMKAC--C 526
PNS Y+S K S +P Y L+
Sbjct: 667 ------GISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKL 720
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+V+ L+ EM + + PN I++T++I GNV A ++L MRE G+ PD + Y
Sbjct: 721 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I ++ + QAF +E + I
Sbjct: 781 KEFIYGYLKQGGVLQAFKGSDEENYAAI 808
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 58/368 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ G + D + N LL C AG +E + K + +G + +D +Y+T
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKL---EEGFRIQKEILGRGFV-MDRVSYNT 537
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ + + + G
Sbjct: 538 LISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG 597
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + +LF + +SN
Sbjct: 598 MIPDVYTYSVMIDGCCKAERTEEGQKLF-------------------DEMMSN------- 631
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ +P T YN L+ A C AL +M+ G+SP
Sbjct: 632 ---------------------NLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISP 670
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A +L+ MR +G+ P+V YT I + ++ + L
Sbjct: 671 NSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 730
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EM + PN +TY ++ +R G++ E + L +M + G + KE I +
Sbjct: 731 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL---HEMREKGIVPDSITYKEFIYGY 787
Query: 667 CE--GVIQ 672
+ GV+Q
Sbjct: 788 LKQGGVLQ 795
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 179/427 (41%), Gaps = 41/427 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV D+ + + A C G A E++ + +E GV+ +V TY+T++ +
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSK---MEEAGVVP-NVVTYNTVIDGLGMSGR 302
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A KE M+ GV P IT+S L+ A + A + +EM + G PN N
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---------GNTDRISNMEHKDKQS 489
L+ + +EA ++A + + +SK Y+ G D I+ K+ S
Sbjct: 363 LIDSLIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKSGQAD-IAERLLKEMLS 420
Query: 490 I---TNTPNFVP-----NSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRV 532
I N +F SH+ FD F P L+ C
Sbjct: 421 IGFNVNQGSFTSVICLLCSHH-MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479
Query: 533 KALMNEMRTV--GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ ++ + G + + L+ +G +E +I K + G D V+Y T I
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
C +K+L +AF +EM ++P+ TY L+R ++++V++ + + D +
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLL---NMNKVEEAIQFWGDCKRN 596
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAE 710
G + +I+ C+ ++ Q + + +N+ +P +++ + +S
Sbjct: 597 GMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM---SNNLQPNTVVYNHLIGAYCRSGRL 653
Query: 711 NLAIDLR 717
++A++LR
Sbjct: 654 SMALELR 660
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC ++ V G+SP+ +T I+A G
Sbjct: 216 PSKTTCNILLTSLVRATEFQKCCEAFHVV--------CKGVSPDVYLFTTAINAFCKGGK 267
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G+ P+VV Y T I S R +AF E+M ++P L+TY
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L++ ++ + V ++M + G+ N LI+ E
Sbjct: 328 LVKGLTK---AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIE 369
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 19/332 (5%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + H+ KGV DV+ +
Sbjct: 201 LALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF----HVVCKGV-SPDVYLF 255
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+++ M AGV PN +T++++I+ +G ++A E+M++
Sbjct: 256 TTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVE 315
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ +A + A+ + + T + + N +N+
Sbjct: 316 RGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT--------EKGFPPNVIVYNNL---- 363
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGL 544
S+ + T++TYN L+K C + L+ EM ++G
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ N S+T +I + AL+ + M MSP TT I + + +A
Sbjct: 424 NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVE 483
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L+ + + + T LL G L E
Sbjct: 484 LWLKFLNKGFLVDTKTSNALLHGLCEAGKLEE 515
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 29/253 (11%)
Query: 189 KELDEEFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
K+LDE F + V K PD Y + +L N V E A++ +
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPD-----NYTYSILIRGLLNMNKVEE---------AIQFWG 591
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAH 303
K++ P++Y +ID C + + +++++ S N+ N V+N L+ +
Sbjct: 592 DCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L LE+ ++M+ G+ + A+Y L+K + A+ + E++ +E L+ +V
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMR-MEG---LEPNV 707
Query: 364 FTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
F Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V +A L
Sbjct: 708 FHYTALIDGYG--KLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 764
Query: 421 FEEMLQAGCEPNS 433
EM + G P+S
Sbjct: 765 LHEMREKGIVPDS 777
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 195/473 (41%), Gaps = 46/473 (9%)
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD------------------I 222
+ ++ V L ++ + L N +N+ I C++ D I
Sbjct: 103 MRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTII 162
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYE 280
F + K + AL +D P++Y TII+ G+C G+ + + +
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIIN--GLCKMGETAAAAGLIK 220
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ ++ +++L++ D + L+++ M+ G+ + SY L++ C
Sbjct: 221 KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A + E+ L + D+ T+S ++ +F A V + M GV PN
Sbjct: 281 RWKEASAMLNEMTSLN----IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNV 336
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT++SL++ + V +A LF+ M+ GC+P+ +IL+ + D A +LF
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + NT + + H Q + + H + + P
Sbjct: 397 M--------IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY------LPDLC 442
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY++L++ C Y KA L M+ L PN + +TILID+ SGN+ A ++ +
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G+ PDV YTT I + L +A F +M+ PN +Y ++R
Sbjct: 503 FVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRG 555
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 186/427 (43%), Gaps = 63/427 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P + T+I+ G+C G++ ++ +++D+ ++ ++Y + +++N +
Sbjct: 159 PTIITFTTLIN--GLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M ++G D+ +Y+ L+ + C L E +++AKG+ V +Y+++
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLC---KDRLVNEALDIFSYMKAKGI-SPTVVSYTSL 272
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ W+ A + +M S + P+ +T+S LI+ G V +A + + M + G
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EPN N L+ ++L V + +D R
Sbjct: 333 EPNVITYNSLMHG----------------YSLQMEVVEARKLFDVMITR----------- 365
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
KP +Y+IL+ C K L NEM GL+PN
Sbjct: 366 --------------------GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+T LI A G + A ++ K M +G PD+ Y+ ++ + L +AF LF
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M+ ++PNLV Y L+ + + G+L+ ++ ++ +++ G + + +I C
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARK---LFSELFVHGLQPDVQIYTTIINGLC 522
Query: 668 -EGVIQD 673
EG++ +
Sbjct: 523 KEGLLDE 529
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M+ G+ + + NIL+ CL + L + +V L L+ + T++T++
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLG----LQPTIITFTTLING 170
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + AL++ +DM++ G P+ T++++IN G A L ++M + GC+P+
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230
Query: 433 SQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ L+ + + + A +F ++ +S T V+ G S K+ +
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG---LCSFSRWKEASA 287
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+ N + P T+++L+ C + + ++ M +G+ PN
Sbjct: 288 MLNEMT------------SLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ L+ V A ++ +M G PDV +Y+ I KR+ +A LF
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM H + PN V+Y TL+ A + G L E ++ +++DM GY + L+E +C
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARE---LFKDMHTNGYLPDLCTYSVLLEGFC 452
Query: 668 E 668
+
Sbjct: 453 K 453
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 173/396 (43%), Gaps = 61/396 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + K R + AL + K SP + ++I G+C + ++ A+
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ--GLCSFSRWKEASAML 289
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCL 336
++ S N+ +I F+ L+++ + LE V K M ++GV ++ +YN L+ L
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGN-VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V A++++ + +G K DVF+YS ++ + K A ++ +M+ G+TP
Sbjct: 349 QMEVVEARKLF---DVMITRGC-KPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP 404
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NT+++++LI+A G + +A LF++M G P+ ++LL+ + +AFRLF
Sbjct: 405 NTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF 464
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R A+ Y KP
Sbjct: 465 R---------AMQGTY--------------------------------------LKPNLV 477
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y IL+ + C + + L +E+ GL P+ +T +I+ G ++ AL+ + M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
EDG P+ +Y I+ ++ K +A L EM+
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 44/489 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G G+ ++
Sbjct: 261 PKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEV 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y ++ G+ D +Y ILL+ C
Sbjct: 321 LFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLC 380
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY----STIVKVFADAKWWQMALKVKEDMLS 391
A+++ +G+LK F + ++K++ D A+ E
Sbjct: 381 ERKMVHKAEDVI--------EGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCR 432
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G ++ +S++++ A GL E+A H+F G E + N++++A +A Q+DR
Sbjct: 433 -GKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDR 491
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + ++ V E Y+ S H+ K+ + K
Sbjct: 492 VSSLFES--MEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKM-------------KD 536
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+P TY+ ++++ +A L NEM+ G+ PN I + ILID +GNV+
Sbjct: 537 AGFEPKCETYSAIIRSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKE 596
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL ++ + G+SP+ + T+ IK + K+A L+ M P+++ +L
Sbjct: 597 ALHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML- 655
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYK-----ANDTYLKELIEEWCEGV-IQDKNQNQGE 680
+ Y L V + ++ + + + YL + I E + I K Q G
Sbjct: 656 --NLYAKLEMVTEAKEIFDSLRRNNHADAVSYTTMAYLYKSIGLLSESIRITHKLQKSGL 713
Query: 681 VTLCRRTNS 689
++ C N+
Sbjct: 714 LSDCASCNA 722
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 183/437 (41%), Gaps = 56/437 (12%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + KK + + Y +SPN+ T+ID C GD++K+ +++++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + ++ L+ + + + +++ M+ G++ ++ +YN ++ C +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+Y E + G+L +V T+ ++ A K DM S GV PN +
Sbjct: 281 KALELYQE---MLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI+ AG + +A+ L E+ + P+ +IL++ C DR
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG---LCGVDRM--------- 384
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
E+ DG + K+ F P TYN L
Sbjct: 385 --------EEADGLLQEM---------------------------KKKGFLPNAVTYNTL 409
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + KA+ ++M G+ PN I+++ LID +G +E A+ + M G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVAYT I + K+AF L +EM+ + PN+ T L+ + G + + +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 640 CLAVYQDMWKAGYKAND 656
G K N+
Sbjct: 530 LFLAKTGTDTTGSKTNE 546
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 183/455 (40%), Gaps = 58/455 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
++ D + A R +D + P + I +I G+CG+ S A ++ +R+ + N
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR--GLCGESRISEAESMFRTMRNSGMLPN 262
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA-------------------------- 322
+Y +N++M+ +K LE+Y+ M G++
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI 322
Query: 323 DMAS---------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
DMAS YN L+ C AGN A ++ E++ E + DVFTYS ++K
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE----ILPDVFTYSILIKGL 378
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + ++M G PN +T+++LI+ G +E+A+ + +M + G EPN
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHK 485
+ L+ +A + + A L+ + + T + G DGNT + HK
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL-HK 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ Q PN S D + + + TD K NE+ S
Sbjct: 498 EMQEAGLHPNVFTLS--CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT--NELDRSLCS 553
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PNH+ +T LI G + A + MR G+ PDV I+ R+ L+ L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
++ I PN Y L + G L +C
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALRC 648
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 164/383 (42%), Gaps = 54/383 (14%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY +M G ++ +Y L+ CC G+ + A ++ E+ +E K + V Y+ +
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM--IEKK--IFPTVVIYTIL 234
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A + M ++G+ PN T++++++ V++A+ L++EML G
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN IL+ C+ D R + + D S
Sbjct: 295 LPNVVTFGILIDG---LCKTDEMVSA-RKFLI------------------------DMAS 326
Query: 490 ITNTPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCT--DYYR 531
PN FV N + K + P TY+IL+K C
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L+ EM+ G PN +++ LID GN+E A+++ M E G+ P+++ ++T I
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +++ A L+ EM + P++V Y L+ + G+ E ++++M +AG
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAG 503
Query: 652 YKANDTYLKELIEEWC-EGVIQD 673
N L LI+ C +G I D
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISD 526
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 81/402 (20%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L+KT G D G S + D+ P
Sbjct: 530 LF----LAKT----GTDTTG-------------------------SKTNELDRSLC-SPN 555
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L++ CTD ++ ++MR GL P+ + ++I + ++ + +
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ + G+ P+ Y K S LK A E++ I
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 182/458 (39%), Gaps = 52/458 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ RT++ + + I + ++ N +FNSL++ NA D + ++
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 312 YKNMQKLGVMADMASYNILLKACC---------------------LAGNTVLA------- 343
+ M G +YNI + + C LA + VL
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 344 ----------QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
++ + +K + KG + D TY+ ++ AK + + + ++M AG
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVP-DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ T++ LI++ AGL+EQA F+EM GC PN LL A +++ Q +A
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKR 508
+F + Y D + K + + T V + Y +
Sbjct: 543 DIFHR-MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDT 601
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TY L+ C A L++ M G PN I + LID G ++
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDN 661
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ M + G P V YT+ I + RL A + EM + PN+VTY ++
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
S+ G E+++ L + M + G N LI+
Sbjct: 722 GLSKVG---EIEKALNLLSLMEEKGCSPNVVTYTALID 756
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 193/469 (41%), Gaps = 61/469 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA----- 277
LF + V + D A + ++ SP Y+ I + ICG A
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTT-CGSPPGYVAYNIF-IGSICGQEELPNAELLDL 400
Query: 278 ---IYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YE++ + + LN + N L V + F ++ K M + G + D ++Y +
Sbjct: 401 VEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAF--QILKEMMRKGFVPDTSTYTKV 458
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C A + ++ E+K + + DV+TY+ ++ F A + A ++M
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMK----RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN +T+++L++A + + QA +F M+ A C PN+ + L+ +A +
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQ 574
Query: 451 RAFRLFR-------------------SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQS 489
+A ++ + T++ V G DG ++S+
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634
Query: 490 ITN--TPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYR 531
+ PN V ++ F K + + P+ TY L+ D
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694
Query: 532 VKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
A+ ++EM +PN +++T +ID G +E AL +L +M E G SP+VV YT
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I ++ + + LF++M PN VTY L+ G L E
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAH 803
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 166/401 (41%), Gaps = 44/401 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A ++ V K M G D ++ +A C G + +
Sbjct: 207 YNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR-------WADAL 259
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ K LD + ++ +A + A+ M PN +T+ +L++
Sbjct: 260 NMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 319
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ M+ GC PN N L+ A + A++LF T +
Sbjct: 320 KQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAY 379
Query: 469 --------GEDYDGNTDRISNME--HKDKQSITNTPNFVPNSHYS-------SFDKRF-- 509
G++ N + + +E +++ + + N V +++S F+K F
Sbjct: 380 NIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQI 439
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY ++ C K+ L EM+ G++P+ ++TILID+
Sbjct: 440 LKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCK 499
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A MR G SP+VV YT + ++SK+L QA +F M PN VT
Sbjct: 500 AGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVT 559
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDM-WKAGYKANDTYLK 660
Y L+ + G E+Q+ VY+ + +G +D Y +
Sbjct: 560 YSALIDGLCKAG---EIQKACEVYEKLIGTSGNVESDFYFE 597
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 187/430 (43%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + K + L+ A + PN +ID G+C G+ K+ +Y
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALID--GLCKAGEIQKACEVY 580
Query: 280 EDL--RSQNVTLNIY--------------VFNSLMN--VNAHDLKFTLEVYKNMQKLGVM 321
E L S NV + Y + +L++ A + E+ M G
Sbjct: 581 EKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE 640
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQ 380
+ Y+ L+ C G AQE++ + G L V TY++++ ++F D +
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVF---LRMTKCGYLP-SVHTYTSLIDRMFKDGRL-D 695
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+A+KV +ML+ PN +T++++I+ + G +E+A++L M + GC PN L+
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + D + +LF+ + G + T R+ + H + + + + +
Sbjct: 756 DGLGKTGKADASLKLFKQMN------SKGCAPNYVTYRVL-INHCCAAGLLDEAHLLLDE 808
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
K + Y+ ++ + L+ EM + P + +LID+
Sbjct: 809 M-----KHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863
Query: 561 SGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G +E AL++ K + E S ++ + Y + I+ + ++++AF+L+ EM I P+
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923
Query: 618 LVTYITLLRA 627
L+ +++L++
Sbjct: 924 LIVFVSLVKG 933
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------- 299
K+ +P++Y +ID G ++R+ ++++RS + N+ + +L++
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-------GEVK- 351
+ AHD ++ M + +Y+ L+ C AG A E+Y G V+
Sbjct: 539 IQAHD------IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVES 592
Query: 352 --HLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ E + +V TY ++ A+ A ++ + ML+AG PN I + +LI+
Sbjct: 593 DFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDG 652
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G ++ A +F M + G P+ L+ + + D A ++ S L+ +
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL-SEMLNDSCNP 711
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
Y D +S + I N + S + P TY L+
Sbjct: 712 NVVTYTAMIDGLSKV-----GEIEKALNLL------SLMEEKGCSPNVVTYTALIDGL-G 759
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ A L +M + G +PN++++ +LI+ C +G ++ A +L M+ +
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
Y A++ SK+ + L EEM+ ++ P Y L+ + S+ G L
Sbjct: 820 GYHCAVQ--GFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRL 867
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 132/341 (38%), Gaps = 68/341 (19%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W AL+ + G P+ +T+++L+ A+AG VE + +EM +G +
Sbjct: 185 WDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGY 244
Query: 439 LLQACVEACQFDRAFRL-----FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
QA + ++ A + F T+ TQ+ G + + H+ + + +
Sbjct: 245 FAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN-SCI 303
Query: 494 PNFVP-NSHYSSFDKRFSF---------------KPTTTTYNILMKACCT--DYYRVKAL 535
PN V + S F K+ F P + +N L+ C DY L
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 536 MNEMRTVGLSPNHISWTILIDA-CG----------------------------------- 559
N M T G P ++++ I I + CG
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 560 -----GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G G E A QILK M G PD YT I ++K+++++F LF+EMK +
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
P++ TY L+ + + G ++Q + + +M G N
Sbjct: 484 NPDVYTYTILIDSFCKAGL---IEQARSWFDEMRSVGCSPN 521
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 56/362 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ M+ +GV ++ Y IL++ACC G+ A+ ++ + L L + + Y+
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG----LAANQYIYTI 182
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ + M GV PN T++SLI G + A +F+E+ + G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ NIL+ Q +A +G +R+
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKA--------------------EGLLERM--------- 273
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
KR PTT T+N+LM C KAL + +++ +GL P
Sbjct: 274 ------------------KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ ILI GN ++++ M + G+SP V YT + VRS +++A+ +F
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
MK + P+ TY L+ G++ E + +Y+ M + + ND +I +
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASK---LYKSMVEMHLQPNDVIYNTMINGY 432
Query: 667 CE 668
C+
Sbjct: 433 CK 434
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 62/411 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN++I +I+ C GD +++ ++ + + N Y++ ++N K E
Sbjct: 139 SPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFE 198
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ +GV+ ++ +YN L+ C G LA +++ E+ +K + + TY+ ++
Sbjct: 199 LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI----SKRGVACNAVTYNILI 254
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + E M A + P T T++ L++ N G +++A+ E++ G
Sbjct: 255 GGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLC 314
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQ 488
P NIL+ SK GN+ +S + E +D+
Sbjct: 315 PTLVTYNILISG------------------FSKV---------GNSSVVSELVREMEDR- 346
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
P+ TY ILM D + + + M+ +GL P
Sbjct: 347 ---------------------GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP 385
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ +LI GN+ A ++ K M E + P+ V Y T I + +A
Sbjct: 386 DQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFL 445
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
EEM + PN+ +YI+ ++ + G E ++ L ++M +AG K ++
Sbjct: 446 EEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL---KEMTEAGLKPPES 493
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 53/267 (19%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++INA + L+EQ++ F+ M+ G P+S N L ++ DR + F + L
Sbjct: 43 AVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LG 101
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+TQ FD ++ I +
Sbjct: 102 RTQ---------------------------------------FD--------VYSFWITI 114
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA C + K L+ +M T+G+SPN +TILI+AC +G+++ A + M + G++
Sbjct: 115 KAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLA 174
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ YT I + K F L+++MK + PNL TY +L+ R G L
Sbjct: 175 ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL---SLA 231
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWC 667
V+ ++ K G N LI C
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLC 258
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + ++ + + LMN V + D++ E++ M+++G++ D +Y +L+ C+ G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 339 NTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N V A ++Y + HL+ V+ Y+T++ + ALK E+M+ GVTP
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVI------YNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
N ++ S I G +A L +EM +AG +P C+ + QA
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
>gi|414886512|tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 44/489 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G G+ ++
Sbjct: 261 PKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEV 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y ++ G+ D +Y ILL+ C
Sbjct: 321 LFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLC 380
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY----STIVKVFADAKWWQMALKVKEDMLS 391
A+++ +G+LK F + ++K++ D A+ E
Sbjct: 381 ERKMVHKAEDVI--------EGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCR 432
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G ++ +S++++ A GL E+A H+F G E + N++++A +A Q+DR
Sbjct: 433 -GKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDR 491
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + ++ V E Y+ S H+ K+ + K
Sbjct: 492 VSSLFES--MEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKM-------------KD 536
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+P TY+ ++++ +A L NEM+ G+ PN I + ILID +GNV+
Sbjct: 537 AGFEPKCETYSAIIRSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKE 596
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL ++ + G+SP+ + T+ IK + K+A L+ M P+++ +L
Sbjct: 597 ALHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML- 655
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYK-----ANDTYLKELIEEWCEGV-IQDKNQNQGE 680
+ Y L V + ++ + + + YL + I E + I K Q G
Sbjct: 656 --NLYAKLEMVTEAKEIFDSLRRNNHADAVSYTTMAYLYKSIGLLSESIRITHKLQKSGL 713
Query: 681 VTLCRRTNS 689
++ C N+
Sbjct: 714 LSDCASCNA 722
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 218/492 (44%), Gaps = 57/492 (11%)
Query: 215 CIVPRADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GD 271
C VP ++F N + + + KK DL A RA + K P + +I+ G C G+
Sbjct: 235 CCVPH--VVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALIN--GFCKAGE 290
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMAS 326
+ + ++ ++ + +N+ VFN++++ + K+ L E+ + M ++G D+ +
Sbjct: 291 FEAVDQLLTEMAARGLNMNVKVFNNVIDA---EYKYGLVTEAAEMLRRMAEMGCGPDITT 347
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI++ C G A E+ + K +G+L + F+Y+ ++ + + A +
Sbjct: 348 YNIMINFSCKGGRIEEADELLEKAKE---RGLLP-NKFSYTPLMHAYCKKGDYVKASGML 403
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ G + +++ + I+ AG ++ A+ + E+M++ G P++Q NIL+
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGL--- 460
Query: 447 CQFDR--AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ R A +L S L + N++ T F+ N
Sbjct: 461 CKKGRIPAMKLLLSEMLDR-----------------NVQPDVYVFATLIDGFIRNGELDE 503
Query: 505 FDKRF------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILID 556
K F P YN ++K C AL +NEM +V +P+ +++ +ID
Sbjct: 504 AIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVID 563
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
++ AL++ M + P+V+ YT+ I + + +A +F MK + + P
Sbjct: 564 GYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVP 623
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-----VI 671
N+VTY TL+ + G + ++ ++++ M G ND LI +I
Sbjct: 624 NVVTYTTLVGGFFKAG---KPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLI 680
Query: 672 QDKNQNQGEVTL 683
++K+ + E +L
Sbjct: 681 EEKDSKENERSL 692
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 34/304 (11%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LD +S+++K+ A + + V E+M + + P +S+LI A A +G +++A+ L
Sbjct: 93 LDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQL 152
Query: 421 FEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
F + + C P N+LL V++ + D A +L+ + +T G D T I
Sbjct: 153 FHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDK--MLQTDDGTGAVVDNYTTSI 210
Query: 480 --------SNMEH-----KDKQSITNTP-----NFVPNSHYSSFD-----------KRFS 510
+E K + P N + + + D K
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
PT TY L+ C ++ V L+ EM GL+ N + +IDA G V A
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L+ M E G PD+ Y I + R+++A L E+ K + PN +Y L+ A
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390
Query: 629 SRYG 632
+ G
Sbjct: 391 CKKG 394
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 183/437 (41%), Gaps = 56/437 (12%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + KK + + Y +SPN+ T+ID C GD++K+ +++++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + ++ L+ + + + +++ M+ G++ ++ +YN ++ C +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+Y E + G+L +V T+ ++ A K DM S GV PN +
Sbjct: 281 KALELYQE---MLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI+ AG + +A+ L E+ + P+ +IL++ C DR
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG---LCGVDRM--------- 384
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
E+ DG + K+ F P TYN L
Sbjct: 385 --------EEADGLLQEM---------------------------KKKGFLPNAVTYNTL 409
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + KA+ ++M G+ PN I+++ LID +G +E A+ + M G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVAYT I + K+AF L +EM+ + PN+ T L+ + G + + +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 640 CLAVYQDMWKAGYKAND 656
G K N+
Sbjct: 530 LFLAKTGTDTTGSKTNE 546
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 174/425 (40%), Gaps = 59/425 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P M C ++D G + +Y D+ ++ + N+ + +L++ D +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + + Y IL++ C A+ ++ + + G+L +++TY+T++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF---RTMRNSGMLP-NLYTYNTMMD 271
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + AL++ ++ML G+ PN +T+ LI+ + A +M G P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ +A A L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSL------------------------------------ 355
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
+S +K P TY+IL+K C L+ EM+ G PN +
Sbjct: 356 ----------HSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GN+E A+++ M E G+ P+++ ++T I ++ +++ A L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-E 668
+ P++V Y L+ + G+ E ++++M +AG N L LI+ C +
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 669 GVIQD 673
G I D
Sbjct: 522 GRISD 526
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 190/463 (41%), Gaps = 92/463 (19%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN------------TPNFVPNSHY 502
LF + T + T + + D + ++ ++ + I+ N P +H
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHL 589
Query: 503 SSF---------DKRFSFKPTTTT----YNIL----------------MKACCTDYYRV- 532
+ KR+ T+ + IL +KAC V
Sbjct: 590 HTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVE 649
Query: 533 -KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K + + G P T LI +GNV A M ++ S +++++T+ I
Sbjct: 650 GKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHN----MFDEIPSKNLISWTSVIS 705
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
V ++R +A LF +M+ +QP++VT L A + G+L
Sbjct: 706 AYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGAL 748
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV-----TLNIYVFNSLMNVNAHDLKFT 308
P +++ ++I + G+ + +++++ S+N+ ++ YV N N
Sbjct: 664 PIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNK-------A 716
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ MQ V D+ + + L AC G + + I+ ++H +G L D+ ++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRH---RG-LDTDLCLNNS 772
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ +++ A + + V PN +T+ ++ AC++AGLVE+ F M
Sbjct: 773 LINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSM 822
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S N ISWT +I A + ALQ+ + M+ D + PD+V T A+ C L
Sbjct: 694 SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ ++H + +L +L+ S+ G +
Sbjct: 754 IHAYIRHRGLDTDLCLNNSLINMYSKCGEI 783
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 53/421 (12%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG--------- 338
+++ FN L+N H L F V + KLG D + L+K CL G
Sbjct: 98 DLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFH 157
Query: 339 NTVLAQEIY-----------GEVKHLEAKGVLKL-----------DVFTYSTIVKVFADA 376
+ V+A+ + G K E + L++ +V Y+TI+
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K A + +M+ + P+ +T+++LI C G +++A+ LF +ML +P+
Sbjct: 218 KLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTF 277
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSITNTPN 495
NIL+ + + +A + V + + D N ++ M+ N
Sbjct: 278 NILVDGLCKEGEMKKARNVL--------AVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
FV N+ R P +Y+I++ C +A L EM + ++PN +++
Sbjct: 330 FVFNTM-----ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNS 384
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G + A ++ M G DV+ Y++ + ++ ++ +A +L ++K
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
IQPN+ TY L+ + G L + Q AVYQD+ GY + ++ C EG+
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQ---AVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFD 501
Query: 673 D 673
+
Sbjct: 502 E 502
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 167/405 (41%), Gaps = 68/405 (16%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK-------SRAIYEDLRS 284
G+ R + LR D L PN+ + TIID +C D + S I + +
Sbjct: 183 GETRAALQVLRKIDGL---LVQPNVVMYNTIID--SLCKDKLVIHASDLCSEMIVKRIFP 237
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT ++ L+ LK + ++ M + D+ ++NIL+ C G A+
Sbjct: 238 DVVTYTTLIYGCLI---VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + K + ++ TY++++ + K A V M GVTP+ ++S +
Sbjct: 295 NVLA----VMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
IN +V++A++LF+EM PN+ N L+ + + R+ +W
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL------KYGRISDAW----- 399
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D ++ M ++ + + TY+ L+ A
Sbjct: 400 ------------DLVNEMHNRGQPA------------------------DVITYSSLLDA 423
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C ++ KA L+ +++ G+ PN ++TIL+D +G ++ A + + + G D
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V Y + + +A SL +M+ P+ VTY TL+RA
Sbjct: 484 VKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRA 528
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 263 IDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I + G+C M A+ ++++ S+++ N +NSL++ + + ++ M
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G AD+ +Y+ LL A C A + ++K +G+ + +++TY+ +V
Sbjct: 409 GQPADVITYSSLLDALCKNHQVDKAITLITKIKD---QGI-QPNIYTYTILVDGLCKNGR 464
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A V +D+L G + ++ ++N GL ++A+ L +M GC P++
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYET 524
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
L++A E + D+A +L R + + A+G + N+
Sbjct: 525 LVRALFENDKNDKAVKLLREMIVQGS--AVGSNISSNS 560
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 504 SFDKRFSFK---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
SF K+ K P T+NIL+ C + A ++ ++ +G P+ ++ T LI
Sbjct: 85 SFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGL 144
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G V AL + G D V+Y T I ++ + A + ++ +QPN+
Sbjct: 145 CLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNV 204
Query: 619 VTYITLL 625
V Y T++
Sbjct: 205 VMYNTII 211
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 40/409 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVM 321
G+C G ++RA+ + + N L +N+L++ +F +Y NM G
Sbjct: 319 GLCRMGQVDEARALLNKIPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYE 374
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D ++NI++ G V A E+ E+ K E +V TY+ ++ F
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP------NVITYTILINGFCKQGRL 428
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A ++ M + G++ NT+ ++ LI A G +E+A+ LF EM GC+P+ N L
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFV 497
+ + + + A L+ L E NT + + H + SI V
Sbjct: 489 INGLCKNHKMEEALSLYHDMFL--------EGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540
Query: 498 PNSHYSSFDKRFSFKP-TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ F P TYN L+KA C K L EM G+ P IS IL
Sbjct: 541 D-------EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I +G V AL+ L+ M G++PD+V Y + I + +++A +LF +++ I
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+P+ +TY TL+ G ++ CL +Y+ + +G+ N+ LI
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDA--CLLLYKGV-DSGFIPNEVTWSILI 699
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 173/426 (40%), Gaps = 75/426 (17%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD- 362
D K ++ K M+ G++ + + +++K AG A + L+ GV D
Sbjct: 114 DFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLL-----LDMWGVYSCDP 168
Query: 363 -VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT-------------------------- 395
+Y+ ++ + D ++A V DMLS GV+
Sbjct: 169 TFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLL 228
Query: 396 ---------PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
PN++ + +LI+A V +A+ L E+M CEP+ Q N ++ A
Sbjct: 229 RDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRA 288
Query: 447 CQFDRAFRL--------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ A +L F + L+ + G G D + +K I N +
Sbjct: 289 GRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK----IPNPNTVLY 344
Query: 499 NSHYSSF--DKRF--------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
N+ S + RF ++P T+NI++ Y V A L+NEM
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
PN I++TILI+ G +E A +I+ M G+S + V Y I + ++
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A LF EM +P++ T+ +L+ + H++++ L++Y DM+ G AN
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKN---HKMEEALSLYHDMFLEGVIANTVTYN 521
Query: 661 ELIEEW 666
L+ +
Sbjct: 522 TLVHAF 527
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 165/409 (40%), Gaps = 36/409 (8%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L+I V V + V+ +M GV + ++ +++KA C+
Sbjct: 170 FKSYNVVLDILVDGDCPRVAPN-------VFYDMLSRGVSPTVYTFGVVMKALCMVSEVD 222
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ EDM P+ T+
Sbjct: 223 SACSL---LRDMAKHGCVPNSVI-YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTF 278
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-- 459
+ +I+ AG + +A L + ML G ++ L+ Q D A L
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN 338
Query: 460 -------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYSSFDK 507
TL VA G + +NM + T N V + S +
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398
Query: 508 RFS------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
+ F+P TY IL+ C +A ++N M GLS N + + LI A
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
GN+E ALQ+ M G PD+ + + I ++ ++++A SL+ +M + N V
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY TL+ A S +QQ + +M G ++ LI+ C+
Sbjct: 519 TYNTLVHAFLMRDS---IQQAFKLVDEMLFRGCPLDNITYNGLIKALCK 564
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 34/335 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK LVSAL + PN+ I TI+ + G C G ++ I + ++ ++LN
Sbjct: 389 KKGYLVSALELLNEMVAKRFEPNV-ITYTIL-INGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N L+ D ++ L+++ M G D+ ++N L+ C A +Y
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +GV+ + TY+T+V F Q A K+ ++ML G + IT++ LI A
Sbjct: 507 D---MFLEGVIA-NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKAL 562
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G VE+ + LFEEML G P CNIL+ + + A + + L
Sbjct: 563 CKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM----IHRGL 618
Query: 469 GED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMK 523
D Y+ + + M H + S + F+K S +P TYN L+
Sbjct: 619 TPDIVTYNSLINGLCKMGHVQEAS-------------NLFNKLQSEGIRPDAITYNTLIS 665
Query: 524 ACCTDYYRVKALMNEMRTV--GLSPNHISWTILID 556
C + A + + V G PN ++W+ILI+
Sbjct: 666 RHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 43/259 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
K ++ AL+ + P++Y ++I+ G+C ++ A+ Y D+ + V N
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLIN--GLCKNHKMEEALSLYHDMFLEGVIAN 516
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N+L++ + ++ ++ M G D +YN L+KA C G ++ G
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV---EKGLG 573
Query: 349 EVKHLEAKGV----------------------------------LKLDVFTYSTIVKVFA 374
+ + KG+ L D+ TY++++
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
Q A + + S G+ P+ IT+++LI+ + G+ A L + + +G PN
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 693
Query: 435 CCNILLQACVEACQFDRAF 453
+IL+ V+ + F
Sbjct: 694 TWSILINYIVKKIPWGARF 712
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 57/323 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G ++ +YN L+ + A A +++ E++ + + D TY T++ + A
Sbjct: 406 MVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEP----DRVTYCTLIDIHA 461
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL++ + M +AG++P+T T+S +IN AG + A LF EM++ GC PN
Sbjct: 462 KAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLV 521
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D QS
Sbjct: 522 TYNIMIALQAKARNYQSALKLYR----------------------------DMQSA---- 549
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ +EM+ P+ +
Sbjct: 550 ---------------GFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYG 594
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R +L A++L + M
Sbjct: 595 LLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLEL 654
Query: 613 QIQPNLVTYITLL----RARSRY 631
+ P+L TY LL ARS Y
Sbjct: 655 GLNPSLQTYTLLLSCCTEARSPY 677
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + AK + K+ + M+ G PN +T++ LI++ A + A+ +F
Sbjct: 379 DGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVF 438
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + GCEP+ L+ +A D A +++ + Q A
Sbjct: 439 NEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQ-----RMQAA-------------- 479
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
P T TY++++ + A L EM
Sbjct: 480 ----------------------------GLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++ I+I + N + AL++ + M+ G PD V Y+ ++V L
Sbjct: 512 VEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYL 571
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+A ++F EMK P+ Y L+ +G V++ YQ M G + N
Sbjct: 572 DEAEAVFSEMKRKNWVPDEPVYGLLV---DLWGKAGNVEKAWQWYQTMLNTGLRPN 624
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L AL Y + SP+ + II+ G G + ++ +
Sbjct: 451 VTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCE 510
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q N+ +N + + A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 511 MVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGY 570
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E+K + D Y +V ++ A + A + + ML+ G+ PN
Sbjct: 571 LDEAEAVFSEMK----RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVP 626
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++A + A +L + ML+ G P+ Q +LL C EA
Sbjct: 627 TCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEA 673
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D K PN+ +I G + ++ +++
Sbjct: 383 YTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQ 442
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L F LE+Y+ MQ G+ D +Y++++ AG+
Sbjct: 443 RVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLA 502
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E+ +E V L TY+ ++ + A A+ +Q ALK+ DM SAG P+ +T+
Sbjct: 503 AAHKLFCEM--VEQGCVPNL--VTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTY 558
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +++A +F EM + P+ +L+ +A ++A++ +++
Sbjct: 559 SIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQT 615
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 507 KRFSFKPTTTTY----NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+R +P TY +I KA D+ + M+ GLSP+ +++++I+ G +G
Sbjct: 442 QRVGCEPDRVTYCTLIDIHAKAGFLDF--ALEMYQRMQAAGLSPDTFTYSVIINCLGKAG 499
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++ M E G P++V Y I + +++ + A L+ +M+ QP+ VTY
Sbjct: 500 HLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYS 559
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ G L E + AV+ +M + + ++ L++ W
Sbjct: 560 IVMEVLGHCGYLDEAE---AVFSEMKRKNWVPDEPVYGLLVDLW 600
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + + ++T ++ G + ++L M +DG P+VV Y I R+ L
Sbjct: 372 RQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYL 431
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A +F EM+ +P+ VTY TL+ ++ G L L +YQ M AG DT+
Sbjct: 432 NDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFA---LEMYQRMQAAGLSP-DTFT 487
Query: 660 KELI 663
+I
Sbjct: 488 YSVI 491
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R+ G + D YTT + + R+K+ L ++M QPN+VTY L+ + YG
Sbjct: 370 LKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHS---YG 426
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ + + V+ +M + G + + LI+
Sbjct: 427 RANYLNDAVDVFNEMQRVGCEPDRVTYCTLID 458
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 166/379 (43%), Gaps = 39/379 (10%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y LL+ C G AQ + E++ +K ++ +VF S ++ AK A
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMR---SKNLVP-NVFLCSILIDGLCKAKRSIDA 63
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L+ M +G+ +T+ +++L++ ++QA+ + EM GCEPN N L+
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 443 CVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN-----MEHKDKQSITN 492
+ + DRA LF +S S + V DG T ++ E D++S
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS--- 180
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
D R S P TY++L+ C +A L+ M+ G SP+ I+
Sbjct: 181 ----------HDMDDRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+TIL+D V A ++L+ M + G P++V Y + + R++R+ A +L +M
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGV 670
PN+VTY TL+ + G V+ A+ DM G + LI C+
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVG---RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA- 344
Query: 671 IQDKNQNQGEVTLCRRTNS 689
+Q + L RR S
Sbjct: 345 ----DQVDESIALLRRAVS 359
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 198/492 (40%), Gaps = 67/492 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC---------------- 266
+ +R F + ++ A R +D + PN+++C +ID +C
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71
Query: 267 --GICGDYM----------------KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
GI D + ++ AI ++R N+ +NSL++ ++
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV---KHLEAKGVLKLDV 363
E++++M+ + M +YN LL G A ++ E+ + + +V
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A A+++ E M + G +P+ IT++ L++ V A + E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDR 478
ML AGC PN N LL A + A L R T + V G DG R
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALM 536
+ K + + + DK P YN+L+ C AL+
Sbjct: 312 V-------KDACAMLADMI--------DK--GGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ G+ P+ ++++ +I S ++ A ++L ++ G PDV+ Y+T I ++
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++ +AF L+E M ++VTY TL+ + G + E LA M + G +
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA---RMVRMGTPPST 471
Query: 657 TYLKELIEEWCE 668
LI+ C+
Sbjct: 472 MTYNSLIKGLCD 483
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 185/427 (43%), Gaps = 35/427 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ---NVTLNIYVFNS 296
A+ ++ K SP++ ++D G+C + K A +E LR N+ +NS
Sbjct: 210 AVELLESMKARGCSPDVITYTILVD--GLCKES-KVAAAWEVLREMLDAGCVPNLVTYNS 266
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ A + L + ++M G ++ +Y L+ C G A + ++ ++
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--ID 324
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D+ Y+ ++ A ++ + +S G+ P+ +T+SS+I + +
Sbjct: 325 KGGTP--DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 382
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A L + GC P+ + L+ +A + D AF L+ +V G+ D
Sbjct: 383 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY--------EVMAGDGCDA 434
Query: 475 NTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ S + + K + + + R P+T TYN L+K C + +
Sbjct: 435 DVVTYSTLIDGLCKAGRVDEAHLLLARMV-----RMGTPPSTMTYNSLIKGLCDLNHLDE 489
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-----KIMREDGMSPDVVAY 586
A L+ EM +P+ +++ ILI V+ A+ +L + + G + D +AY
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAY 549
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ I ++ R+ +A F+EM + P+ +TY LL + LHE++ V
Sbjct: 550 SSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH--LVLDQ 607
Query: 647 MWKAGYK 653
M + GY+
Sbjct: 608 MVQLGYR 614
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 8/217 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P IL+ + K + A Y+ ++ T+ID G+C G ++
Sbjct: 398 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID--GLCKAGRVDEA 455
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + + +NSL+ + + L +E+ + M++ +YNIL+
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515
Query: 334 CCLAGNTVLAQEIYGEVK-HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A + + K A G LD YS+++ A AL ++M+
Sbjct: 516 MCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHL-FEEMLQAG 428
GV P+ IT+S L+ + + + HL ++M+Q G
Sbjct: 576 GVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 179/417 (42%), Gaps = 45/417 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NIY + L+N +H DL F+ V + KLG+ + ++ L+ C G A E
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFS--VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + + A+G + DV+TY+TI+ A + + M AG PN +T+S++I
Sbjct: 190 LFDD---MVARGC-RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
++ V +A+ +F M G P+ N L+Q Q+ A L RS +
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305
Query: 463 KTQVALGEDYDG--NTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
V D ++S + K + P+ V YSS +S
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT---YSSLMYGYSLRSEVVEA 362
Query: 512 ------------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+ C K L NEM GL+PN++S+ LI
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++ A + K M +G P++ Y+ + + +AF LF M+ +PN
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
LV Y L+ A + G+L + ++ ++ +++ G + N +I C EG++ +
Sbjct: 483 LVMYNILIDAMCKSGNLRDARK---LFSELFVKGLQPNAQIYTTIINGLCKEGLLDE 536
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 187/444 (42%), Gaps = 35/444 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + K A+ +D P++Y TII+ G+C G+ + +
Sbjct: 169 VTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN--GLCKIGETAAAAGLL 226
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + N+ ++++++ + D + L+++ M+ G+ D+ +YN L++ C
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A + E++ L + D+ T++ +V A V + M GV P+
Sbjct: 287 SQWKEASALLNEMRSLN----IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSL+ + V +A LF+ M+ GC+P+ NIL+ + + D A +LF
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ + N + + H Q S+ N N H + P
Sbjct: 403 EM--------IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN------LPNL 448
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+IL+ C Y KA L M++ PN + + ILIDA SGN+ A ++
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ P+ YTT I + L +A F M+ P+ ++Y ++R G
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIR-----GF 563
Query: 634 LHEVQQCLAV--YQDMWKAGYKAN 655
LH + AV +M G+ A+
Sbjct: 564 LHHKDESRAVQLIGEMRDKGFIAD 587
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 154/355 (43%), Gaps = 53/355 (14%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G L +++T S ++ F+ + +A V ++ G+ P +T+++LIN
Sbjct: 122 KQMELAG-LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCK 180
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G QAM LF++M+ GC P+ ++ + + A L L K + A +
Sbjct: 181 VGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL-----LKKMEEAGCQ 235
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
I + KD++ F S+ K P TYN L++ C +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIF-------SYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ AL+NEMR++ + P+ +++ +L+D G V A +LK M E G+ PDVV Y++
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 589 AI---------------------KVC--------------VRSKRLKQAFSLFEEMKHYQ 613
+ K C + KR+ +A LF EM H
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ PN V+Y TL+ + GSL E + ++++M G N L++ +C+
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARN---LFKNMHTNGNLPNLFTYSILLDGFCK 460
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y V +L +M GLSPN + +ILI+ V+ A +L + + G+ P +V +TT
Sbjct: 114 YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTT 173
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + QA LF++M +P++ TY T++ + G E + + M
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIG---ETAAAAGLLKKME 230
Query: 649 KAGYKAN 655
+AG + N
Sbjct: 231 EAGCQPN 237
>gi|298706229|emb|CBJ29270.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 202/489 (41%), Gaps = 99/489 (20%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADM 324
G G + + ++ +N ++N+ + + K V ++M GV D+
Sbjct: 106 GGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSGRWKEATSVLESMPGKGVAPDV 165
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYSTIVKVFADAKWWQM 381
SY ++AC A E YG + + A+ +K ++ ++T++ FA + +
Sbjct: 166 VSYGAAIEAC-RAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSGRSRQ 224
Query: 382 ALK-VKEDMLSAGVTPNTITWSSLINA--------------------------------C 408
AL V+EDM++AGV P+ TWS+LI+A C
Sbjct: 225 ALSLVEEDMVNAGVKPDLFTWSTLIDAYRAAGESSRDAAELLGRMREAGVEPDVWCFNNC 284
Query: 409 ANA----GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------ 458
NA G E A L E+M AG EPN + +++ACV A ++ L R+
Sbjct: 285 LNAARRRGEWELAFGLLEDMGAAGVEPNCWSYSAVMKACVNAEEWTLVPALLRAMKEGGS 344
Query: 459 ------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK----- 507
W + A G+ G ++ ++ KD + P+ S+ S+ D
Sbjct: 345 TAPPNVWNFNICLDAYGKS--GEWEKAVSLLRKDMPAAGVAPDVT--SYSSAIDAAGKAG 400
Query: 508 ------------RFSFKPT---TTTYNILMKACCTDYY--RVKALMNEMRTV-GLSPNHI 549
R + P+ + YNI + C R +L++E R GL PN
Sbjct: 401 EWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRALSLLSESRAAAGLPPNLR 460
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK------------ 597
S+ IDAC +G E AL +L+ M E G+ PDVV++T+AI K
Sbjct: 461 SFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAAAAAAG 520
Query: 598 --RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L A L EEMK + P ++ ++ + ++ ++ L +++++ +G A+
Sbjct: 521 ERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCT---DANQHERALELFEELRASGQAAD 577
Query: 656 DTYLKELIE 664
+ +I+
Sbjct: 578 EPAFTAIID 586
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 176/411 (42%), Gaps = 40/411 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA-IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
P+++ T+ID G+ + A + +R V +++ FN+ +N + +
Sbjct: 240 PDLFTWSTLIDAYRAAGESSRDAAELLGRMREAGVEPDVWCFNNCLNAARRRGEWELAFG 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M GV + SY+ ++KAC A L + +K E +V+ ++ +
Sbjct: 300 LLEDMGAAGVEPNCWSYSAVMKACVNAEEWTLVPALLRAMK--EGGSTAPPNVWNFNICL 357
Query: 371 KVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A+ +++DM +AGV P+ ++SS I+A AG + A+ L++E +A
Sbjct: 358 DAYGKSGEWEKAVSLLRKDMPAAGVAPDVTSYSSAIDAAGKAGEWDTALALWDEA-RAAL 416
Query: 430 EP---NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG-----EDYDGNTD---R 478
P NS NI + C +A DRA L LS+++ A G ++ D R
Sbjct: 417 PPSALNSHAYNIAIGVCGKAGLADRALSL-----LSESRAAAGLPPNLRSFNAAIDACAR 471
Query: 479 ISNMEH-----KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
E ++ + P+ V ++S F A +
Sbjct: 472 AGRWERALSLLREMEEAGLEPDVV---SFTSAIAAFRGGKAAAAAAAAAAAGERELSLAL 528
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ EM++ GL P S + I C + E AL++ + +R G + D A+T I C
Sbjct: 529 GLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSC 588
Query: 594 VR---------SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
R R + A +L +EM+ + P++ T+ +RA G H
Sbjct: 589 ARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRACCNGGKWH 639
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 131/326 (40%), Gaps = 66/326 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNV----NAHDLK 306
+P++ + ID G G++ + A++++ R+ LN + +N + V D
Sbjct: 383 APDVTSYSSAIDAAGKAGEWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRA 442
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+L + ++ G+ ++ S+N + AC AG A + ++ +E G L+ DV ++
Sbjct: 443 LSL-LSESRAAAGLPPNLRSFNAAIDACARAGRWERALSL---LREMEEAG-LEPDVVSF 497
Query: 367 STIVKVFADAKW--------------WQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ + F K +AL + E+M S G+ P + + S+ I C +A
Sbjct: 498 TSAIAAFRGGKAAAAAAAAAAAGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDAN 557
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
E+A+ LFEE+ +G + ++ +C R W +T VAL
Sbjct: 558 QHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGR-W---ETAVAL---- 609
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
+ ME P+ T+N ++ACC ++
Sbjct: 610 ------LDEMEAS------------------------GVAPSVATFNGAIRACCNGGKWH 639
Query: 531 RVKALMNEMRTV-GLSPNHISWTILI 555
+L+ M V G+ PN S LI
Sbjct: 640 LGSSLLRRMSAVDGVDPNVSSMNALI 665
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL--SSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + GK + +AL +D ++ L S+ N + I VCG G ++ ++ +
Sbjct: 389 YSSAIDAAGKAGEWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRALSLLSE 448
Query: 282 LRSQ-NVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA----- 333
R+ + N+ FN+ ++ A ++ L + + M++ G+ D+ S+ + A
Sbjct: 449 SRAAAGLPPNLRSFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGK 508
Query: 334 -------CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
AG L+ + G ++ ++++G L F++S +K+ DA + AL++
Sbjct: 509 AAAAAAAAAAAGERELSLAL-GLLEEMKSRG-LPPTSFSHSAAIKLCTDANQHERALELF 566
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLV---------EQAMHLFEEMLQAGCEPNSQCCN 437
E++ ++G + ++++I++CA E A+ L +EM +G P+ N
Sbjct: 567 EELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFN 626
Query: 438 ILLQACVEACQFDRAFRLFR 457
++AC ++ L R
Sbjct: 627 GAIRACCNGGKWHLGSSLLR 646
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 30/215 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV------------- 300
PN+ ID C G + ++ ++ ++ + ++ F S +
Sbjct: 457 PNLRSFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAAA 516
Query: 301 ---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+L L + + M+ G+ S++ +K C A A E++ E L A G
Sbjct: 517 AAAGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEE---LRASG 573
Query: 358 VLKLDVFTYSTIVKVFA---------DAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
D ++ I+ A W+ A+ + ++M ++GV P+ T++ I AC
Sbjct: 574 -QAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRAC 632
Query: 409 ANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQA 442
N G L M G +PN N L++
Sbjct: 633 CNGGKWHLGSSLLRRMSAVDGVDPNVSSMNALIRG 667
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 177/453 (39%), Gaps = 86/453 (18%)
Query: 227 FVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIID----------VCGICGDYMKS 275
F R R L + RA +D ++P +Y +ID V +CG+
Sbjct: 106 FARAGAPDRALKTFYRAVHDLGCARPTAPRLY--NHLIDALLRENMVGAVALVCGN---- 159
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+R V N++ +N L+ H + ++ M G D +Y ++ A
Sbjct: 160 ------MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSA 213
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ + A +Y+ ++ Q V DM+ G
Sbjct: 214 LCTLGRVDEATEVLSAAPPVAA---------SYNAVILALCREFRMQEVFAVVGDMVGRG 264
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN IT+++++NA AG + A + M+ GC PN L+ F+
Sbjct: 265 LQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGG-----LFNDG- 318
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+ + + K VA G + P
Sbjct: 319 RVHDALDMWKCMVAEG-----------------------------------------WAP 337
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+T +YN+L++ C+ D +++N+M G PN +++ LID +G+++GA+ I
Sbjct: 338 STVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIW 397
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M G P+VV YT + V + QA SL ++M PN VT+ TL+R+
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLC-- 455
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ V + L V+ +M + G N EL+
Sbjct: 456 -NCRRVGRALGVFHEMRRHGCPPNGRTYNELLH 487
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 143/365 (39%), Gaps = 71/365 (19%)
Query: 312 YKNMQKLGVMADMAS--YNILLKACCLAGNTVLAQEIYGEVK----HLEAKGVLKLDVFT 365
Y+ + LG A YN L+ A +L + + G V ++ GV + +VFT
Sbjct: 120 YRAVHDLGCARPTAPRLYNHLIDA-------LLRENMVGAVALVCGNMRKDGV-QPNVFT 171
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V+ A K+ ++M + G P+ +T+ ++++A G V++A +
Sbjct: 172 YNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP 231
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
N+ ++L C R FR+ + + V G
Sbjct: 232 PVAASYNA----VILALC-------REFRMQEVFAVVGDMVGRG---------------- 264
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVG 543
+P TY ++ A C + A++ M G
Sbjct: 265 -------------------------LQPNVITYTTIVNAFCKAGELRMACAILARMVITG 299
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+PN ++T L+ G V AL + K M +G +P V+Y I+ LK A
Sbjct: 300 CTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGAS 359
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
S+ +M+ + PN TY TL+ S+ G L ++++ DM ++G K N ++
Sbjct: 360 SVLNDMEQHGCFPNARTYSTLIDGFSKAGDL---DGAISIWNDMTRSGCKPNVVVYTNMV 416
Query: 664 EEWCE 668
+C+
Sbjct: 417 GVFCK 421
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 154/381 (40%), Gaps = 20/381 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ TI++ G+ + AI + T N+ F +L+ N + L++
Sbjct: 267 PNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM 326
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M G SYN+L++ C G+ A + + +E G + TYST++
Sbjct: 327 WKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLND---MEQHGCFP-NARTYSTLID 382
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ A A+ + DM +G PN + +++++ + QA L ++ML C P
Sbjct: 383 GFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPP 442
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N L+++ + RA +F G +G T + + H +
Sbjct: 443 NTVTFNTLIRSLCNCRRVGRALGVFHEMRRH------GCPPNGRT--YNELLH----GLF 490
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
N + + + TYN ++ C +A+ + M G+ P+
Sbjct: 491 REGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T +I A G V A IL M +++ YT + +L+ A +M
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKM 610
Query: 610 KHYQIQPNLVTYITLLRARSR 630
+ I PN VT+ L+R R
Sbjct: 611 LYEGIYPNTVTWNVLVRGVFR 631
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++ V C M ++ ++ +
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGV--FCKKLMFNQAESLIDK 434
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ N + L V+ M++ G + +YN LL GN
Sbjct: 435 MLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGN 494
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ V ++ G+ +L + TY+T+V + + A+ M+ G+ P+
Sbjct: 495 CGDALQM---VIEMQNHGI-ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T++++I+A G V A + M C N IL+ E C D+
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILM---AELCNQDK 599
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 6/223 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 410 VVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHE 469
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L++ MQ G+ + +YN ++ C
Sbjct: 470 MRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLC---Q 526
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +E V + +G+ + D FT++ I+ + +MA + M N +
Sbjct: 527 MRMGREAMFFVGRMIVRGI-QPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNIL 585
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ L+ N +E AM +ML G PN+ N+L++
Sbjct: 586 VYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 17/335 (5%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M ++GV+ + + + C G ++ Y ++ + +KG + D TYS ++
Sbjct: 75 YNEMLEMGVVLNKVNVCNFTRCLCCIGKF---EKAYNVIREMMSKGFIP-DSSTYSKVIG 130
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A ++ ++M G+TP+ T+++L++ GL+EQA + F+EM Q GC P
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNME 483
N L+ A ++ + RA +F ++ T + G G T++ +
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMNEMRT 541
+ K + P+ + ++ D +P TY L+ C + + L+ M
Sbjct: 251 ARMKNDKVDIPDV--DIYFRIVDSELK-EPNVVTYGALVDGLCKAHKVKEARDLLETMSL 307
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I + LID G ++ A ++ M G SP+V Y++ I + KRL
Sbjct: 308 EGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDL 367
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A + +M PN+V Y ++ + G E
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 178/454 (39%), Gaps = 82/454 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R L A ++ + PN+ +ID G+ K+ IY
Sbjct: 193 VTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYAR 252
Query: 282 LRSQNVTL-----------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
+++ V + N+ + +L++ AH +K ++ + M G
Sbjct: 253 MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEP 312
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQM 381
+ Y+ L+ C G AQE++ + + G +V+TYS+++ K+F D K +
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTK---MLGHGC-SPNVYTYSSLIDKLFKD-KRLDL 367
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
ALKV ML PN + ++ +++ G ++A L M + GC PN ++
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMID 427
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + DR L + T S PNF+
Sbjct: 428 GFGKAGRVDRCLELLQLMT----------------------------SKGCAPNFI---- 455
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS-WTILIDAC 558
TY +L+ CC A L+ EM+ P HI + +I+
Sbjct: 456 ---------------TYRVLINHCCAAGLLDDAHKLLEEMKQT-YWPKHIGMYRKVIE-- 497
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G S +L +L + EDG P + Y I +++ RL+ A L EE+ +
Sbjct: 498 GFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ- 556
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
TY++L+ + + +V + +Y DM + G+
Sbjct: 557 NTYVSLIESLTL---ACKVDKAFKLYSDMTRRGF 587
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 35/273 (12%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M++ G P+ + ++SL++A +G A L ++M+ G +P NIL+
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGG------ 55
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPN-SHYSSF 505
+ T+ + G +R N +E + N NF F
Sbjct: 56 ------------ICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKF 103
Query: 506 DKRFS---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
+K ++ F P ++TY+ ++ C KA L EM+ G++P+ ++T L
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+D G +E A M++DG +P+VV YT I +++++L +A +FE M
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGC 223
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
PN+VTY L+ + G E ++ +Y M
Sbjct: 224 VPNIVTYTALIDGHCKAG---ETEKACQIYARM 253
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+GE E + ++ ++ + ++D FRIV + +P+V + Y +V C
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV---VTYGALVDG----LCK- 291
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + RDL+ + PN I +ID G C G +++ ++ +
Sbjct: 292 AHKVKEARDLLETMSLEGCE------PNQIIYDALID--GFCKVGKLDEAQEVFTKMLGH 343
Query: 286 NVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N+Y ++SL++ D L L+V M + ++ Y ++ C G T
Sbjct: 344 GCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT--- 400
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
E Y + +E KG +V TY+ ++ F A L++ + M S G PN IT+
Sbjct: 401 DEAYRLMLMMEEKGCYP-NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459
Query: 404 LINACANAGLVEQAMHLFEEMLQ 426
LIN C AGL++ A L EEM Q
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQ 482
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 196/462 (42%), Gaps = 69/462 (14%)
Query: 261 TIIDVCGICGDYMKSR--------AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+II+ I G +KS ++ L +T +I+ FN L+N H ++ F
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAG---------NTVLA------QEIYGEV----- 350
+ + K+G D ++N L+K CL G + VLA Q YG +
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 351 ------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ ++ K ++K++V Y+TI+ K A ++ M++ ++P+
Sbjct: 185 KIGETRTALQMLRKIDGK-LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDV 243
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+S+LI G +E+A LF EM+ P+ NIL+ A + A +
Sbjct: 244 VTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLV- 302
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
V + E N S++ D + N N H + + P +Y
Sbjct: 303 -------VMMKEGVMPNVVTYSSL--MDGYCLVNQVN--KAKHVLNTISQMGAAPNAHSY 351
Query: 519 NILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
++ C ++K +L N+M+ G++P+ +++ LID SG + A +++
Sbjct: 352 CTMINGFC----KIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVD 407
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M ++G ++ Y I ++ + QA +L +++K IQP++ T+ L+ + G
Sbjct: 408 EMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
L Q V+QD+ GY N ++ C EG+ +
Sbjct: 468 RLKNAQD---VFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDE 506
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 154/396 (38%), Gaps = 63/396 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + ++ A Y SP++ +I I G ++ ++ +
Sbjct: 209 VMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ + Y FN L++ +LK + M K GVM ++ +Y+ L+ CL
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + + + A + +Y T++ F K AL + DM G+ P+ +
Sbjct: 329 VNKAKHVLNTISQMGAAP----NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+ +G + A L +EM G N N L+ A + D+A L +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KD+ +P T+N
Sbjct: 445 -------------------------KDQ----------------------GIQPDMYTFN 457
Query: 520 ILMKACCTDYYRVKALMN------EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
IL+ C +V L N ++ + G S N ++ I+++ G + A +L
Sbjct: 458 ILIYGLC----KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M ++G+ PD V Y T I+ ++A L EM
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C AI + +RS V ++ ++ LM+ + + +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y LL+ G V E++G + + G+ D + +S ++ +A A
Sbjct: 335 EITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYAKQGKVDQA 390
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+++RA L + + L + + I + K+ + I + F
Sbjct: 451 LCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF------ 499
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 -ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 621 YITLLRA 627
Y +L
Sbjct: 619 YNIILHG 625
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 179/461 (38%), Gaps = 73/461 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + +M G N + +I+ C+
Sbjct: 451 LCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSHCK 488
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 169/438 (38%), Gaps = 104/438 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + ++ SYNILLK C + +QE E+ H+ A G DV +Y+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLC---DENRSQEAL-ELLHMMADDRGGGSPPDVVSYT 200
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T++S+I A A +++AM + M++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-----VALGEDYDGNTDRISNM 482
G P+ N +L + Q A + + +L DY R M
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC--M 318
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--------------- 527
E + + S KR KP TTY L++ T
Sbjct: 319 EAR--------------KIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 528 ------DYYRVKALM----------------NEMRTVGLSPNHISWTILIDACGGSGNVE 565
D+Y L+ ++MR GL+PN +++ +I SG VE
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 566 GALQILKIMREDGMSPDVVAYTTAIK----------------------VCV--------- 594
A+ + M ++G+SP + Y + I +C+
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 595 ----RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ R+ ++ LFE M ++PN++TY TL+ G + E + L+ M
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS---GMVSV 540
Query: 651 GYKANDTYLKELIEEWCE 668
G K N LI +C+
Sbjct: 541 GLKPNTVTYSTLINGYCK 558
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 183/415 (44%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGR---LDEAIKFLNNMPSYGC-QPNVITHNI 269
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + + DRA +E+ D
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRA-----------------------------IEYLDI- 359
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
V Y P TYN L+ A C D A ++N++ + G SP
Sbjct: 360 -------MVSRGCY----------PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G E A+++L MR G+ PD++ Y++ + R ++ +A F
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ I+PN +TY +++
Sbjct: 463 HDLEGLGIRPNAITYNSIM 481
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 195/440 (44%), Gaps = 40/440 (9%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + +++ G + D+ +YN+L+ C +G EI ++ L+ V DV TY+TI+
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSG------EIDNALQVLDRMNVAP-DVVTYNTIL 166
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D+ + A++V + L P+ IT++ LI A V QAM L +EM G +
Sbjct: 167 RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 226
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTD 477
P+ N+L+ + + D A + + + ++ + G D
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE-K 285
Query: 478 RISNMEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACC 526
+S+M K T N + N +K P + +YN L+ C
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T I + + ++A L +EM+ ++P+++TY +L+ SR G +V + + +
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG---KVDEAIKFF 462
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN-SQRPQSLLLEKVAVH 703
D+ G + N ++ C+ D+ + + +R ++ ++L+E +A
Sbjct: 463 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYE 522
Query: 704 LQKSAAENLAIDL--RGLTK 721
A +L +L RGL K
Sbjct: 523 GLAKEALDLLNELCSRGLVK 542
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 225 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 284
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 285 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 399
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 400 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 503
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G MK + +++R++ ++ +N L+N L ++ NM G ++ ++
Sbjct: 211 GQAMK---LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 267
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+L++ C G + A+++ ++ KG V T++ ++ A+ + E
Sbjct: 268 NIILRSMCSTGRWMDAEKLLSDMLR---KGC-SPSVVTFNILINFLCRQGLLGRAIDILE 323
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G TPN+++++ L++ +++A+ + M+ GC P+ N LL A +
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383
Query: 448 QFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----ISNMEHKD-KQSITNTP 494
+ D A + + ++ V G G T+R + M K K I
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443
Query: 495 NFVPN-SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ V S D+ F +P TYN +M C +A+ + M +
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
P ++TILI+ G + AL +L + G+ A A+K+
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 432
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 433 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEG 518
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 43/364 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M G A+ NI++ C
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + ++ + G D +Y+T++K A+ W+ A ++ ++M+
Sbjct: 332 KQGRV---DDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA L E+M + GCE N N L+ CV+ + D A
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG-RVDSALE 446
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF S T++ T + G E D + ++ M KD
Sbjct: 447 LFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD------------------- 487
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C +A L+ +M G +PN I++ L+D N
Sbjct: 488 -----CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCN 542
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + +G+SPD+V Y++ I V R R+++A +F ++ ++P V Y
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 624 LLRA 627
+L A
Sbjct: 603 ILLA 606
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 183/417 (43%), Gaps = 48/417 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 130 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 244
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 245 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCP-----PNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 419 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 37/411 (9%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
VC G + ++ + +++R++ T NI +N ++N + + E + G
Sbjct: 190 VCKSTG-FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SY +LK C A +E++ E+ K + +V T+ +V+ F + A
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMME---KNCMPNEV-TFDMLVRFFCRGGMVERA 304
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++V E M G NT + +IN G V+ A M GC P++ +L+
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 443 CVEACQFDRAFRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
A +++ A L F ++ Q L E +++S EH +
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS--EHGCE 422
Query: 488 QSITNTPNFVPNSHY------SSFDKRFSF--KPTTTTYNILMKACCTDYYRVKA---LM 536
+I T N + N S+ + +S KP T TY L+ C + R+ A L+
Sbjct: 423 VNIV-TYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC-NAERLDAAAELL 480
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +PN +++ +L+ G ++ A+++++ M E G +P+++ Y T +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITND 540
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++A L + + P++VTY +++ SR + E + + QD+
Sbjct: 541 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C T + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L + G PD V+YTT +K +KR + LF EM PN VT+ L+R
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 296
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
R G V++ + V + M G AN T +I C +G + D Q
Sbjct: 297 RGGM---VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/557 (19%), Positives = 211/557 (37%), Gaps = 118/557 (21%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 183 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 239 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 283
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 284 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 453 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A+ L E+M++ GC PN N LL C + A L
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGL--------------- 553
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+SN P TY+ ++ + +A
Sbjct: 554 ----VSN----------------------------GVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + ++ +G+ P + + ++ A N +GA+ M +G P+ + Y T I+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 593 CVRSKRLKQAFSLFEEM 609
LK+ L E+
Sbjct: 642 LANEDFLKETRDLLREL 658
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 116 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 638 QQCL 641
++ L
Sbjct: 235 REFL 238
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 204/485 (42%), Gaps = 43/485 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRAD------------------ILFCNFVREFGKKR 235
EF V +C N N+ I + C + R + I + + + +
Sbjct: 659 EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG 718
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN Y +II + C IC ++ + ++ Q + + V+
Sbjct: 719 ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC-KLAEAEEAFSEMIGQGILPDTIVY 777
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 834
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G L+ D+ T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 835 MLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 943
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K ++ +K+A+ LF+EMK ++ TY L++ + E ++ ++ M +
Sbjct: 1062 KGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEARE---IFDQMRRD 1118
Query: 651 GYKAN 655
G A+
Sbjct: 1119 GLAAD 1123
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 184/424 (43%), Gaps = 39/424 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIV 675
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G A + + +E KG DV +YST++ + K+ E M
Sbjct: 676 IHFVCQLGRINEAHHL---LLLMELKGYTP-DVISYSTVINGYCRFGELDKVWKLIEKMK 731
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ T+ S+I + +A F EM+ G P++ L+ +
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + IT T
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE-- 849
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ EM +QP +VT+ L+ +G L + ++ L M G N T L+
Sbjct: 970 EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNCLV 1026
Query: 664 EEWC 667
+++C
Sbjct: 1027 KQYC 1030
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ E VG+ N S+ I+I G + A +L +M G +PDV++Y+T I
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R L + + L E+MK ++PN TY +++ R L E ++ + +M G
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEE---AFSEMIGQGILP 772
Query: 655 NDTYLKELIEEWCE 668
+ L++ +C+
Sbjct: 773 DTIVYTTLVDGFCK 786
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 74/357 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK---- 512
L H T N + N S +F + S K
Sbjct: 642 MGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 513 -----PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 680 MKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 666 WCE 668
C+
Sbjct: 521 LCQ 523
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
T++ R+ H + + + DM K G K N LI C
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 62/416 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL------- 331
D+ S +I+ FN+ +N+ + L+ LE++ +M G D+ SY I++
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168
Query: 332 ---------------------KAC-------CLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
KAC C G LA E+ V KG +K++
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGV----IKGGVKVNS 224
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+ ++ F A+K+K M G P+ +T++ L+N C G+V++A+ L E
Sbjct: 225 LVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M ++G EP+ N LL+ +A DRA + +K + Y+
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDV-VSYNTVITAFCKAR 343
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
K Y F++ +P T+NIL+ A + + VK L++EM
Sbjct: 344 RTRKG-------------YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + P+ I +T ++D +G V+ A + + M E+G++PDV++Y + ++ R+
Sbjct: 391 TKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
A LF+EM+ + P+ VTY ++ R ++ V+ M + G+ N
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRG---KKISLACRVWDQMMERGFTLN 503
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 20/346 (5%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+Y+ + A C A N + I+ + +++ G + D++ ++T + + + AL++
Sbjct: 83 TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVP-DIWAFNTYLNLLCRQNRLETALEL 141
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M S G P+ ++++ +I+A NA ++A ++ ++ G P+ + C L+
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ D A+ L +V Y+ D M DK +F
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVN-SLVYNALIDGFCRMGRVDKAM-----------KIKAF 249
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
R P TYNIL+ CC + +A L+ M G+ P+ S+ L+ +
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 564 VEGA-LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ A L +++ M+ GM DVV+Y T I +++R ++ + LFEEM I+P++VT+
Sbjct: 310 VDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ A R GS H V++ L +M K + + +++ C+
Sbjct: 369 ILIDAFLREGSTHVVKKLL---DEMTKMRVLPDCIFYTAVVDHLCK 411
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQNVTLNIYVFNS 296
A+R + ++ P++Y ++ G C M RA + E ++++ + ++ +N+
Sbjct: 278 AVRLVETMERSGVEPDLYSYNELLK--GFCKANMVDRAHLMMVERMQTKGMC-DVVSYNT 334
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ A + E+++ M G+ DM ++NIL+ A G+T + +++ E+ +
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
VL D Y+ +V +A V DM+ GV P+ I++++L+N V
Sbjct: 395 ---VLP-DCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVE------ACQ-----FDRAFRLFRSWTLSK 463
AMHLF+EM G P+ +++ + AC+ +R F L R LS+
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRH--LSE 508
Query: 464 TQVALGEDYDGNT 476
T V + DG T
Sbjct: 509 TLVNAIQSSDGTT 521
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 115/291 (39%), Gaps = 19/291 (6%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + + + + + S I+ AGL+ QA++LF++M ++ C S N + + +
Sbjct: 1 MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV--PNSHYSSFD 506
A +R + + L Y + ++ + PN + P H D
Sbjct: 61 LHLAHHYYRRHVIPRGFSLLPFTYS-----------RFISALCSAPNNINLPLIHSLLLD 109
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGN 563
F P +N + C AL + M + G P+ +S+TI+IDA +
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ + + + G+SPD A + R+ A+ L + ++ N + Y
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
L+ R G V + + + M + G + L+ CE + D+
Sbjct: 230 LIDGFCRMG---RVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDE 277
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 165/384 (42%), Gaps = 40/384 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D SYNILL C+AG+ E G +E GV + DV TY+T+ K F
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSM---DEALGFTDDMEKHGV-EPDVVTYNTLAKGFL 352
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T+++LI G +E+A+ L +E L G + N
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM---- 482
N+LL + + + A LF + + + G +G R +
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472
Query: 483 -------EHKDKQSIT----NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
H ++++ N +Y R YNI++ Y R
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG----YVR 528
Query: 532 VKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + M+ G++P+ +++ LI+ G++ A ++L+++R G+ P VV
Sbjct: 529 LDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YTT + +++ F EM+ + P VTY L++ R +HE Q L +
Sbjct: 589 YTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLL---E 645
Query: 646 DMWKAGYKANDTYLKELIEEWCEG 669
M+ G + +I+ +C+G
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFCKG 669
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 64/393 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K GV D+ +YN L K L G A+++ V+ + +G L D+ TY+T++
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV---VQKMLLQG-LNPDLVTYTTLICGH 386
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ ALK++++ LS G N I ++ L++ G +E+A+ LF+EM EP+
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNT-------DR 478
+IL+ + RA++L+ L ++ V LG +GN D
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506
Query: 479 ISNMEHKDKQSITN---------------------------TPNFVP-NSHYSSFDKRFS 510
+ M+ + + N TP+ V N+ + F +R
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566
Query: 511 FK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
P+ TY LM A C + + ++EM + P H+++T+
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTV 626
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + +LQ+L+ M G+ PD V Y T I+ + K + +A L+ M +
Sbjct: 627 LIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
P VTY L+ A +G L +V + + +D
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 140/356 (39%), Gaps = 31/356 (8%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + S N ++ C G +A+ + L K L D F+Y+ ++ A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFC----LMVKNGLLHDSFSYNILLHGLCVAGSM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL +DM GV P+ +T+++L GL+ A + ++ML G P+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382
Query: 440 LQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + + A +L R TLS K V ++ +E
Sbjct: 383 ICGHCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA----------- 430
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWT 552
+ FD + +P Y+IL+ C + + R L +MR P+H +
Sbjct: 431 -----LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ +GN+ A + DVV Y I VR + +A L+ +M
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
I P++VT+ TL+ R G L E ++ L V + K + TY L+ +CE
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEVIR--LKGLVPSVVTY-TTLMNAYCE 598
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+I+ +VR G + A++ Y + +P++ T+I+ G C GD M++R +
Sbjct: 520 NIMIDGYVRLDG----IAEAMQLYYKMIERGITPSVVTFNTLIN--GFCRRGDLMEARKM 573
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E +R + + ++ + +LMN +++ M+ V+ +Y +L+K C
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
E ++++ AKG+L D TY+TI++ F K AL++ ML P
Sbjct: 634 QNKM---HESLQLLEYMYAKGLLP-DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689
Query: 397 NTITWSSLINA 407
+T+ LINA
Sbjct: 690 TQVTYKVLINA 700
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YM ++ + D + N + + ++ L++Y M +Y +L
Sbjct: 645 EYMYAKGLLPDSVTYNTIIQCFC-------KGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C+ G+ +++ V +E + + L TY TI+K AL ML
Sbjct: 698 INALCIFGDL---KDVDRMVVSIEDRNI-TLKKVTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ G + +S++IN GL+ +A + F ML G P+ + C +L A
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNA 805
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 197/459 (42%), Gaps = 42/459 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G E ++ + KG+ + V+TY+ +
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGR---VDEALDMLEEMIEKGI-EPTVYTYTLPIT 311
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 489
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +LK M E G +P+V
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 606
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
DM K N LI C Q+ ++ E+ L
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLC----QEGKADEAEILL 641
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 143/350 (40%), Gaps = 33/350 (9%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +Y M K G++ + +YN L+ C+ G A +I+ +E G L +
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF---HWMEGHGSLA-NTQ 409
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ I+K + A+ + E ML G P +T+++LIN G V A L + M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
+ GCEP+ N L+ + + + A F+ +S T + G DG
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 477 D----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYN 519
D + ME + N V N S + RFS P TY
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVING--LSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + A + ++M PN +++ LI G + A +LK M
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G++PD V +T+ I V R+ AF L M +PN TY LL+
Sbjct: 648 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 290 NIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N+++N + + +F+ ++ M + G++ ++ +Y L+ C G T A +I+
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ +E + L +++TYS+++ A + ++M G+ P+ +T++SLI+
Sbjct: 607 HD---MEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF--DRAFRLFRSWTLS 462
G ++ A L M+ GC+PN + ++LL+ + C ++ F L ++ L
Sbjct: 663 FVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLG 719
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K ++ +A R D K++ P+ + ++ G + +++
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N + +L++ ++ D K L + K M+++G ++ SYN ++
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I + +G+L +V TY+T++ Q A K+ DM PN
Sbjct: 564 FSEAEKI---CDKMVEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+SSLI G ++A L +EM + G P+ L+ V + D AF L R
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 298
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R +L V+ M K G N LI C EG + +
Sbjct: 244 CRNRNL---DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 165/384 (42%), Gaps = 40/384 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D SYNILL C+AG+ E G +E GV + DV TY+T+ K F
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSM---DEALGFTDDMEKHGV-EPDVVTYNTLAKGFL 352
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T+++LI G +E+A+ L +E L G + N
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM---- 482
N+LL + + + A LF + + + G +G R +
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472
Query: 483 -------EHKDKQSIT----NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
H ++++ N +Y R YNI++ Y R
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG----YVR 528
Query: 532 VKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + M+ G++P+ +++ LI+ G++ A ++L+++R G+ P VV
Sbjct: 529 LDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YTT + +++ F EM+ + P VTY L++ R +HE Q L +
Sbjct: 589 YTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLL---E 645
Query: 646 DMWKAGYKANDTYLKELIEEWCEG 669
M+ G + +I+ +C+G
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFCKG 669
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 64/393 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K GV D+ +YN L K L G A+++ V+ + +G L D+ TY+T++
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV---VQKMLLQG-LNPDLVTYTTLICGH 386
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ ALK++++ LS G N I ++ L++ G +E+A+ LF+EM EP+
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNT-------DR 478
+IL+ + RA++L+ L ++ V LG +GN D
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506
Query: 479 ISNMEHKDKQSITN---------------------------TPNFVP-NSHYSSFDKRFS 510
+ M+ + + N TP+ V N+ + F +R
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566
Query: 511 FK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
P+ TY LM A C + + ++EM + P H+++T+
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTV 626
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + +LQ+L+ M G+ PD V Y T I+ + K + +A L+ M +
Sbjct: 627 LIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
P VTY L+ A +G L +V + + +D
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 140/356 (39%), Gaps = 31/356 (8%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + S N ++ C G +A+ + L K L D F+Y+ ++ A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSXFC----LMVKNGLLHDSFSYNILLHGLCVAGSM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL +DM GV P+ +T+++L GL+ A + ++ML G P+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382
Query: 440 LQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + + A +L R TLS K V ++ +E
Sbjct: 383 ICGHCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA----------- 430
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWT 552
+ FD + +P Y+IL+ C + + R L +MR P+H +
Sbjct: 431 -----LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ +GN+ A + DVV Y I VR + +A L+ +M
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
I P++VT+ TL+ R G L E ++ L V + K + TY L+ +CE
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEVIR--LKGLVPSVVTY-TTLMNAYCE 598
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+I+ +VR G + A++ Y + +P++ T+I+ G C GD M++R +
Sbjct: 520 NIMIDGYVRLDG----IAEAMQLYYKMIERGITPSVVTFNTLIN--GFCRRGDLMEARKM 573
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E +R + + ++ + +LMN +++ M+ V+ +Y +L+K C
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
E ++++ AKG+L D TY+TI++ F K AL++ ML P
Sbjct: 634 QNKM---HESLQLLEYMYAKGLLP-DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689
Query: 397 NTITWSSLINA 407
+T+ LINA
Sbjct: 690 TQVTYKVLINA 700
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YM ++ + D + N + + ++ L++Y M +Y +L
Sbjct: 645 EYMYAKGLLPDSVTYNTIIQCFC-------KGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C+ G+ +++ V +E + + L TY TI+K AL ML
Sbjct: 698 INALCIFGDL---KDVDRMVVSIEDRNI-TLKKXTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ G + +S++IN GL+ +A + F ML G P+ + C +L A
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNA 805
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 59/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + K R + AL + K SP ++ ++I G+C + ++ A+
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ--GLCNFSRWKEASALL 173
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLA 337
++ S N+ N+ FN L++ + K V K M ++GV D+ +YN L+ +
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V A++++ + KG K DVF+YS ++ + AK A ++ +M+ G TPN
Sbjct: 234 TEVVEARKLF---DVMITKGC-KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++++LI+ G + +A LF+ M G PN ILL + +AFRLFR
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ S Y KP
Sbjct: 350 AM---------------------------------------QSTY--------LKPNLVM 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNIL+ A C + + L +E+ +GL PN +T +I+ G ++ AL+ + M
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+DG PD +Y I+ ++ K +A L EM+
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 28/390 (7%)
Query: 291 IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I F +L+N KF +E++ +M G D +Y ++ C G T LA ++
Sbjct: 45 IVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLF- 103
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
K +E G +L+V TYST++ + AL + M + ++P T++SLI
Sbjct: 104 --KKMEEAGC-QLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
N ++A L EM PN N+L+ F + ++ + + KT +
Sbjct: 161 CNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT------FCKEGKVLAAEGVLKTMTEM 214
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC 526
G + D T + + FD + KP +Y+IL+ C
Sbjct: 215 GVEPDVVTYNSLMYGYSMWTEVVEARKL--------FDVMITKGCKPDVFSYSILINGYC 266
Query: 527 TDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
K L NEM G +PN++S+ LI G + A + K M +G P++
Sbjct: 267 KAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLY 326
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + + L +AF LF M+ ++PNLV Y L+ A + G+L + ++ ++
Sbjct: 327 TYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARE---LF 383
Query: 645 QDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+++ G + N +I C EG++ +
Sbjct: 384 SELFVIGLQPNVQIYTTIINGLCKEGLLDE 413
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 181/449 (40%), Gaps = 98/449 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + GK A+ +D P+ Y TII+ G+C G+ + ++
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIIN--GLCKIGETALAAGLF 103
Query: 280 EDLRSQNVTLNIYVFNSLMN-----------------VNAHDLKFTLEVYKN-------- 314
+ + LN+ +++L++ + A D+ T+ Y +
Sbjct: 104 KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNF 163
Query: 315 ------------MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
M L +M ++ ++N+L+ C G VLA E G +K + GV + D
Sbjct: 164 SRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK-VLAAE--GVLKTMTEMGV-EPD 219
Query: 363 VFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V TY+++ ++ + W ++ A K+ + M++ G P+ ++S LIN A +++A L
Sbjct: 220 VVTYNSL--MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM+ G PN+ N L+ CQ R L + Q D
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHG---LCQLGR---------LREAQ-----------DLFK 314
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
NM N PN TY IL+ C Y KA L
Sbjct: 315 NMHTNG-----NLPNLY-------------------TYAILLDGFCKQGYLGKAFRLFRA 350
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M++ L PN + + IL++A SGN++ A ++ + G+ P+V YTT I +
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L +A F M+ P+ +Y ++R
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 52/341 (15%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T + ++ F + + V + G+ P +T+++LIN G QA+ LF++M
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+P+ ++ + + A LF+ + Q+ N S + H
Sbjct: 72 VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQL--------NVVTYSTLIH 123
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
S+ S+ K PT TY L++ C + + AL+NEM ++
Sbjct: 124 ----SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI------------ 590
+ PN +++ +L+D G V A +LK M E G+ PDVV Y + +
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239
Query: 591 ---------KVC--------------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K C ++KR+ +A LF EM H PN V+Y TL+
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L E Q ++++M G N L++ +C+
Sbjct: 300 LCQLGRLREAQD---LFKNMHTNGNLPNLYTYAILLDGFCK 337
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 185/430 (43%), Gaps = 29/430 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P + T+I+ G G + ++ +++D+ ++ + Y + +++N + +
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M++ G ++ +Y+ L+ + C A +I+ +++AK + +FTY+++++
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF---SYMKAKDI-SPTIFTYTSLIQ 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W+ A + +M S + PN +T++ L++ G V A + + M + G EP
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHKDKQSI 490
+ N L+ + A +LF + G D + I N K K+
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLF------DVMITKGCKPDVFSYSILINGYCKAKRID 272
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
F H S P +YN L+ C + L M T G PN
Sbjct: 273 EAKQLFNEMIHQGS-------TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL 325
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ IL+D G + A ++ + M+ + P++V Y + +S LK A LF E
Sbjct: 326 YTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSE 385
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +QPN+ Y T++ + G L E L +++M G ++ +I
Sbjct: 386 LFVIGLQPNVQIYTTIINGLCKEGLLDEA---LEAFRNMEDDGCPPDEFSYNVII----R 438
Query: 669 GVIQDKNQNQ 678
G +Q K++++
Sbjct: 439 GFLQHKDESR 448
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 198/440 (45%), Gaps = 36/440 (8%)
Query: 244 YDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
+ +K+ ++ N YI II C C + ++ A+ ++ + + + +++++M+
Sbjct: 387 FKKAKERHTNLNAYIYGNIIYAYCQAC-NMDRAEALVREMEEEGIDAPLDIYHTMMDGYT 445
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ + L V+K +++ G + +Y L+ G A E+ +K + K +K
Sbjct: 446 MIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMK 505
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TYS ++ F K W A V ED++ G+ P+ + ++++I A G +++A+H+
Sbjct: 506 ----TYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHM 561
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----RSWTLSKTQ----VALG--- 469
+EM + C P S+ ++ A + RA +F RS + + LG
Sbjct: 562 VKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVE 621
Query: 470 -EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT-----------T 517
+ + + M +T + + + + D +F+ T T
Sbjct: 622 KRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFT 681
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+KACC AL EM + N + ILID G++ A +++ M
Sbjct: 682 YEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN 741
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
++G+ PD+ YT+ I C ++ + +A EEM+ ++PN+ TY TL+ + SL
Sbjct: 742 QEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWAN-ASLP 800
Query: 636 EVQQCLAVYQDMWKAGYKAN 655
E + L+ ++++ AG K +
Sbjct: 801 E--KALSCFEELKLAGLKPD 818
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 31/395 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + + K +++ L+ ++ + L+N+ K + LEV K M
Sbjct: 436 IYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMM 495
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ +G+ +M +Y++L+ + A ++ +V K LK DV Y+ I+K F
Sbjct: 496 KSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDV----IKDGLKPDVVLYNNIIKAFCG 551
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 552 MGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 611
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDR----ISNME 483
N L+ VE + ++A + L+ T + G G+T + + M
Sbjct: 612 FNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR 671
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-----------TTTYNILMKACC--TDYY 530
++ Q T + + S + + T T YNIL+ D +
Sbjct: 672 NEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIW 731
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
LM +M G+ P+ ++T I+AC +G++ A + ++ M G+ P+V YTT I
Sbjct: 732 EAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLI 791
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ ++A S FEE+K ++P+ Y L+
Sbjct: 792 HGWANASLPEKALSCFEELKLAGLKPDKAVYHCLM 826
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SP+ + TI+ GD K+ + +R++ + L+++
Sbjct: 621 EKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVF 680
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V + M + + YNIL+ G+ A ++ +
Sbjct: 681 TYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADL---M 737
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV + D+ TY++ + A A K E+M +AGV PN T+++LI+ AN
Sbjct: 738 QQMNQEGV-QPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWAN 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ FEE+ AG +P+ + L+ + + A+
Sbjct: 797 ASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 150/380 (39%), Gaps = 67/380 (17%)
Query: 131 CVVGVLKKLNELGVAPLELFDGSGFKLLK--NECQRLLDSGEVEMFVGLMEVLEEFR--- 185
C++ V K+L E G AP + G + + + L+ ++ VG+ ++ +
Sbjct: 453 CLI-VFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLI 511
Query: 186 ---LPVKELDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
L +K+ F + + + KPDV +L+ N ++ F ++
Sbjct: 512 NGFLKLKDWTNAFAVFEDVIKDGLKPDV--------------VLYNNIIKAFCGMGNMDR 557
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ +K P II G+ ++ I++ +R ++ FN+L+
Sbjct: 558 AIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVL 617
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V ++ +E+ M GV D +Y ++ G+T A E + ++++ +G
Sbjct: 618 GLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRN---EG 674
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA------------------------- 392
L+LDVFTY ++K + Q AL V +M +
Sbjct: 675 -LQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEA 733
Query: 393 ----------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
GV P+ T++S INAC AG + +A EEM AG +PN + L+
Sbjct: 734 ADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHG 793
Query: 443 CVEACQFDRAFRLFRSWTLS 462
A ++A F L+
Sbjct: 794 WANASLPEKALSCFEELKLA 813
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 29/280 (10%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++ A G + +A FE M G +P+S L+ A + A
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351
Query: 456 FRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
R +++L G GN + K K+ TN ++ + ++
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY-- 409
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+AC D R +AL+ EM G+ + ++D N E
Sbjct: 410 --------------CQACNMD--RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + K ++E G +P V+ Y I + + ++ +A + + MK I+ N+ TY L+
Sbjct: 454 LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLING 513
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ L + AV++D+ K G K + +I+ +C
Sbjct: 514 ---FLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFC 550
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 182/454 (40%), Gaps = 58/454 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI---CGYCSLRRL 652
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
+ +++ + + N L LI C+ +I
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKIMI 686
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ L+ C + R L M G+ P+ I+++ LID +G + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ DVV +++ I V V+S L A +++ M I PN+VTY L++ +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G ++E +Y + K G + + LI+ +C+
Sbjct: 404 DGRIYEA---FGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L VY+ M G N LI+ C+
Sbjct: 367 VKSGDLATAS---VVYKRMLCQGISPNVVTYTILIKGLCQ 403
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 64/421 (15%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNM 315
I V G+C G ++ + ED++ V+ N+ +N+L++ + + K M
Sbjct: 160 IVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEM 219
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+ + +YNIL+ C N A ++GE ++ +G L+ +V TY+ ++
Sbjct: 220 VAKGICPNEVTYNILIDGFCKDENVSGAMRVFGE---MQRQG-LRPNVVTYNILINGLCS 275
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ +++ M+S+ + PN +T + LIN V +A++LF +M + G +PN+
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ A + + + AF L Y+ DR
Sbjct: 336 YTTLIDAYCKDGRMEDAFAL----------------YNMMIDR----------------- 362
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
P +TYN L+ C D ++LMNEM + LS + +++ I
Sbjct: 363 --------------GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID+ G A+++L M E G++P V Y T + R L+ A + M+
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQ 672
Q N+VT+ L++ G L + L +M + G N T + + EE E G +
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLL---NEMLERGLVPNRTTYEIIKEEMMEKGFVP 525
Query: 673 D 673
D
Sbjct: 526 D 526
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 173/403 (42%), Gaps = 56/403 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y ++ + + LN+ FN ++N L +V ++M+ GV ++ +YN L+ C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +K + AKG+ +V TY+ ++ F + A++V +M G+
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEV-TYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++ LIN + G V++A+ L ++M+ + EPN N+L+ + + A L
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F ++ME KQ + P
Sbjct: 321 F-----------------------NDME---KQGVD---------------------PNA 333
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+ A C D AL N M G+ P ++ LI G+V+ A ++
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +S DVV Y I + ++A L +EM + P+ VTY TL+ R G+
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKN 675
L + L V M + G +AN LI+ +C +G ++D N
Sbjct: 454 L---RAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDAN 493
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 507 KRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K + P TYN L+ C Y+ A++ EM G+ PN +++ ILID
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD 241
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
NV GA+++ M+ G+ P+VV Y I ++ +A +L ++M ++PN+VT+
Sbjct: 242 ENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTH 301
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ---- 676
L+ + +++E + ++ DM K G N LI+ +C +G ++D
Sbjct: 302 NVLINGFCKNKTVNEA---INLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNM 358
Query: 677 --NQG---EVT--------LCRRTNSQRPQSLLLEKVAVHLQKSAAE-NLAIDLRGLTKV 722
++G EV+ LCR+ + + +SL+ E V+ L N+ ID K
Sbjct: 359 MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID-SLCKKG 417
Query: 723 EARIIVLAVLRMMKENYSLGTDEFHI 748
E+R ++++ E + G + H+
Sbjct: 418 ESR----KAVKLLDEMFEKGLNPSHV 439
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 6/221 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K + + A+ ++ +K PN T+ID G + A+Y + +
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N L+ D+K + M + AD+ +YNIL+ + C G + A
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E + KG L TY+T++ + + AL V+ M G N +T + L
Sbjct: 424 KLLDE---MFEKG-LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
I G +E A L EML+ G PN I+ + +E
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 190/463 (41%), Gaps = 75/463 (16%)
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+L IR C + R D A +D K P+++ C ++ +
Sbjct: 125 DLLIRACCELKRGD-----------------DAFECFDMMKGKGVIPHVHACNDMLSLFL 167
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
K+ +Y ++ + ++ FN ++NV LK E M+ LG+ ++
Sbjct: 168 KSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV 227
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN ++ C G A+ I+ +K +GV K D +TY + + + A +
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMK---CRGV-KPDSYTYGSFISGMCKEGKLEEASGM 283
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
E M G+ P +T+++LI+ N G +E A ++M++ G P N+L+ A
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
C+ D A DG I M K VP+S
Sbjct: 344 DCKMDEA--------------------DG---IIKEMSEK---------GLVPDS----- 366
Query: 506 DKRFSFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TYNIL+ C C + + L +EM + G+ P +++T LI G
Sbjct: 367 ----------VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A + + + G+ PD++ + I + + +AF++ +EM ++ P+ VT+ T
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
L++ R R G + ++ + ++M G K + LI +
Sbjct: 477 LMQGRCREGKVEAARELI---EEMKSRGIKPDHISYNTLISGY 516
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 173/407 (42%), Gaps = 64/407 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C D MK + + + + N L+++ + N + + L Y M ++ + + + ++N
Sbjct: 143 CFDMMKGKGVIPHVHACNDMLSLF-----LKSNRTEKAWVL--YAEMFRMRIKSSVVTFN 195
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A+E G +EA G+ K +V TY+TI+ + + A + +
Sbjct: 196 IMINVLCKEGKLKKAKEFIG---LMEALGI-KPNVVTYNTIIHGYCSRGRVEGARMIFDL 251
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M GV P++ T+ S I+ G +E+A + E+M + G P + N L+
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ AF +++DK R
Sbjct: 312 LEMAF-----------------------------DYRDKMV------------------R 324
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT +TYN+L+ A D ++ EM GL P+ +++ ILI+ GNV+
Sbjct: 325 EGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKK 384
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M G+ P V YT+ I V + R+KQA LFE++ I P+L+ + L+
Sbjct: 385 AFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALID 444
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
G++ + A+ ++M + ++ L++ C EG ++
Sbjct: 445 GHCANGNM---DRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-- 299
+D K P+ Y + I G+C G ++ + E ++ + +N+L++
Sbjct: 249 FDLMKCRGVKPDSYTYGSFIS--GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
N +L+ + M + G+M +++YN+L+ A L E G +K + KG++
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL---DCKMDEADGIIKEMSEKGLV 363
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D TY+ ++ + + A + ++M+S G+ P +T++SLI + G ++QA
Sbjct: 364 P-DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT--------QVALGED 471
LFE++++ G P+ N L+ DRAF + + K + G
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR---------------FSFKPTTT 516
+G + + + K + N+ S + KR F PT
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL 542
Query: 517 TYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
TYN L++ C + + L+ EM + G++PN ++ LI+ G GNVE
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE---GIGNVE 590
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFV--------- 175
+EG+++ G+L+K+ E+G+ P + + L+ C + G +EM
Sbjct: 273 KEGKLEEASGMLEKMKEIGLRPTAVTYNT---LIDGYCNK----GNLEMAFDYRDKMVRE 325
Query: 176 GLMEVLEEFRLPVKEL------DEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
GLM + + + + L DE I++ K V ++ Y +IL + R
Sbjct: 326 GLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY-------NILINGYCR 378
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
K+ A +D P ++I V G ++ ++E + + +
Sbjct: 379 CGNVKK----AFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +FN+L ++ H ++ + K M ++ V+ D ++N L++ C G A+E
Sbjct: 435 DLIMFNAL--IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+K ++G+ K D +Y+T++ ++ + A +V+++MLS G P +T+++LI
Sbjct: 493 LIEEMK---SRGI-KPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G PN
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPN 575
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 185/434 (42%), Gaps = 46/434 (10%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+++ + ++ N L++ V L+ + + ++ M + GV D S+ +++
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAEN-------MFVEMCQRGVSPDCVSFKLMVV 232
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
ACC G + A++ + + +G + +D T + I+ F + + M+
Sbjct: 233 ACCNMGRVLEAEKW---LNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ PN I +++LIN G ++QA L EEM++ G +PN L+ + ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348
Query: 453 FRLFRSWTLS-------KTQVALGEDY--DGNTDR----ISNMEHKDKQSITNT------ 493
FRLF S T A+ Y + +R +S M+ + TNT
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408
Query: 494 -----PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVG 543
NFV + F P TYN ++ C + YR L+N++ G
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR---LLNKVSVHG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + +++TIL+ + +L M + G +PD+ +YTT I R K++K++
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LFEE + P TY +++ RYG+ + ++Q M G + LI
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGN---TSLAVKLFQRMSNHGCAPDSITYGALI 582
Query: 664 EEWCEGVIQDKNQN 677
C+ D +N
Sbjct: 583 SGLCKESKLDDARN 596
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 23/372 (6%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
C IID G + + + + N+ F +L+N +K E+ + M
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ G ++ ++ L+ C G T A ++ +K + + G K +V TY+ ++ +
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGY-KPNVHTYTAMINGYCKE 378
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A + M G+ PNT T+++LI+ G +A L + M + G PN
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N ++ + D A+RL L+K V G DG T I H + + F
Sbjct: 439 NAIIDGLCKKGSLDEAYRL-----LNKVSVH-GLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 497 VPNSHYSSFDK--RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
F+K + F P +Y L+ C + L E ++GL P ++T
Sbjct: 493 --------FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+I GN A+++ + M G +PD + Y I + +L A +L++ M
Sbjct: 545 SMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604
Query: 613 QIQPNLVTYITL 624
+ P VT +TL
Sbjct: 605 GLSPCEVTRLTL 616
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-EVY 312
PN T+ID G+++++ + + + + + NIY +N++ ++ K +L E Y
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI--IDGLCKKGSLDEAY 455
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + K+ G+ AD +Y IL+ C +T + + ++ K D+ +Y+T+
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM----LKVGFTPDIHSYTTL 511
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F K + + ++ E+ +S G+ P T++S+I G A+ LF+ M GC
Sbjct: 512 ISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+S L+ + + D A L+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLY 598
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + + + K + V A D K SPN+Y IID G+C G
Sbjct: 396 LVPNTNT-YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID--GLCKKGSLD 452
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + + + + + LM+V+ D +L + M K+G D+ SY L+
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C ++ ++ E L K TY++++ + +A+K+ + M +
Sbjct: 513 SXFCRQKQMKESERLFEEAVSLGLIPTKK----TYTSMICGYCRYGNTSLAVKLFQRMSN 568
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
G P++IT+ +LI+ ++ A +L++ M+ G P
Sbjct: 569 HGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 180/451 (39%), Gaps = 58/451 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI---CGYCSLRRL 652
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +++ + + N L LI C+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 208/472 (44%), Gaps = 38/472 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F + + + K DL +A Y SPN+ + TI+ + G+C G ++ +Y
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYTIL-IKGLCQDGRIYEAFGMY 414
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + +I ++SL++ +L+ +Y++M K+G D+ Y +L+ L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LS 472
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ + VK L ++L+V +++++ + + ALKV M G+ P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++++ G +E+A+ LF M + G EP++ L+ A + + +LF
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 458 SWTLSKTQVALG------------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-- 503
+K + + + +N+ + T N + + S
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 504 ---------SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
K F P T T IL+ C D + + M G PN +++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D S ++EG+ ++ + M+E G+SP +V+Y+ I + R+ +A ++F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++ P++V Y L+R + G L E +Y+ M + G K +D + L E
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNGVKPDDLLQRALSE 819
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ L+ C + R L M G+ P+ I+++ LID +G + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ DVV +++ I V V+S L A +++ M I PN+VTY L++ +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G ++E +Y + K G + + LI+ +C+
Sbjct: 404 DGRIYEA---FGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L VY+ M G N LI+ C+
Sbjct: 367 VKSGDLATAS---VVYKRMLCQGISPNVVTYTILIKGLCQ 403
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 195 FRIVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREF--GKKRDLVSALRAYDASKK 249
FR++ + KPDV +R + + R + F R F G + D ++ DA K
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL 309
H+ I + D+ M+ I D+ NV +++ H ++
Sbjct: 579 HMKPT---IGLQLFDL-------MQRNKISADIAVCNVVIHLLF-------KCHRIEDAS 621
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + N+ + + D+ +YN ++ C A+ I+ E+ + G + T + +
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGP---NTVTLTIL 677
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A+++ M G PN +T+ L++ + + +E + LFEEM + G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+ +I++ + + D A +F
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIF 764
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 199/459 (43%), Gaps = 42/459 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 297
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G A ++ E + KG+ + V+TY+ +
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE---MIEKGI-EPTVYTYTLPIT 353
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 531
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +L+ M E G +P+V
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 648
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
DM K N LI G+ Q+ ++ E+ L
Sbjct: 649 HDMEKRKCLPNLYTYSSLI----YGLCQEGKADEAEILL 683
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 39/362 (10%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +Y M K G++ + +YN L+ C+ G A +I+ +E G L +
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF---HWMEGHGSLA-NTQ 451
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ I+K + A+ + E ML G P +T+++LIN G V A L + M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
+ GCEP+ N L+ + + + A F+ +S T + G DG
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 477 D-RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
D +S +E ++ P +YN ++ + + +
Sbjct: 572 DIALSLLERMEEMGCN---------------------PNVESYNAVINGLSKENRFSEAE 610
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ ++M GL PN I++T LID +G + A +I M + P++ Y++ I
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + +A L +EM+ + P+ VT+ +L+ + L + + + M G K
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG---FVVLGRIDHAFLLLRRMVDVGCK 727
Query: 654 AN 655
N
Sbjct: 728 PN 729
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/472 (19%), Positives = 191/472 (40%), Gaps = 49/472 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K ++ +A R D K++ P+ + ++ G + +++
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N + +L++ ++ D K L + + M+++G ++ SYN ++
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I + +G+L +V TY+T++ Q A K+ DM PN
Sbjct: 606 FSEAEKI---CDKMAEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI G ++A L +EM + G P+ L+ V + D AF L R
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Query: 460 TLSKTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
V +Y + + ++ ++K ++ + + +SF P
Sbjct: 722 ----VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH-------------EAVYSFSPH 764
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
N + V L+ M +G P +++ L+ G A Q++K M
Sbjct: 765 EKDVN---------FEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+E G PD Y + + ++ + A +F ++ Q +L Y L+ A + G +
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR 686
E Q A++ +M + + A++ W V+ D +GE+ LC +
Sbjct: 876 EEAQ---ALFDNMLEKEWNADEIV-------WT--VLVDGLLKEGELDLCMK 915
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--E 310
+PN T+ID G + ++ E + N+ +N+++N + + +F+ +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M + G++ ++ +Y L+ C G T A +I+ + +E + L +++TYS+++
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD---MEKRKCLP-NLYTYSSLI 667
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + ++M G+ P+ +T++SLI+ G ++ A L M+ GC+
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + ++LL+ + C + L E + + + +K
Sbjct: 728 PNYRTYSVLLKGLQKEC------------------LLLEEKVAVQHEAVYSFSPHEKDV- 768
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN- 547
NF S+ + +PT TY+ L+ C +Y + L+ +M+ G P+
Sbjct: 769 ----NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 824
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I +++LI C V+ AL+I + G + Y I ++ ++++A +LF+
Sbjct: 825 EIYYSLLIAHCKNL-EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYL 659
M + + + + L+ + G E+ C+ + M + N TY+
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEG---ELDLCMKLLHIMESKNFTPNIQTYV 933
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 225 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 285 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 340
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R +L V+ M K G N LI C EG + +
Sbjct: 286 CRNRNL---DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 184/434 (42%), Gaps = 46/434 (10%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+++ + ++ N L++ V L+ + + ++ M + GV D S+ +++
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN-------MFVEMCQRGVSPDCVSFKLMVV 232
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
ACC G + A+ + + +G + +D T + I+ F + + M+
Sbjct: 233 ACCNMGRVLEAERW---LNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ PN I +++LIN G ++QA L EEM++ G +PN L+ + ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348
Query: 453 FRLFRSWTLS-------KTQVALGEDY--DGNTDR----ISNMEHKDKQSITNT------ 493
FRLF S T A+ Y + +R +S M+ + TNT
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408
Query: 494 -----PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVG 543
NFV + F P TYN ++ C + YR L+N++ G
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR---LLNKVSVHG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + +++TIL+ + +L M + G +PD+ +YTT I R K++K++
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LFEE + P TY +++ RYG+ + ++Q M G + LI
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGN---TSLAVKLFQRMSNHGCAPDSITYGALI 582
Query: 664 EEWCEGVIQDKNQN 677
C+ D +N
Sbjct: 583 SGLCKESKLDDARN 596
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 23/372 (6%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
C IID G + + + + N+ F +L+N +K E+ + M
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ G ++ ++ L+ C G T A ++ +K + + G K +V TY+ ++ +
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGY-KPNVHTYTAMINGYCKE 378
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A + M G+ PNT T+++LI+ G +A L + M + G PN
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N ++ + D A+RL L+K V G DG T I H + + F
Sbjct: 439 NAIIDGLCKKGSLDEAYRL-----LNKVSVH-GLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 497 VPNSHYSSFDK--RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
F+K + F P +Y L+ C + L E ++GL P ++T
Sbjct: 493 --------FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+I GN A+++ + M G +PD + Y I + +L A +L++ M
Sbjct: 545 SMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604
Query: 613 QIQPNLVTYITL 624
+ P VT +TL
Sbjct: 605 GLSPCEVTRLTL 616
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 18/303 (5%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V FA+ + A+ + +M + G+ P+T T + +++ GLVE A ++F EM Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +++ AC C R R W + + D T I K
Sbjct: 220 VSPDCVSFKLMVVAC---CNMGRVLEAER-WLNAMVERGFIVDNATCTLIIDAFCQK--- 272
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
N V + + P + L+ C +A L+ EM G P
Sbjct: 273 ---GYVNRVVGYFWKMVE--MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327
Query: 547 NHISWTILIDACGGSGNVEGALQI-LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N + T LID G E A ++ LK++R DG P+V YT I + +L +A L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
M+ + PN TY TL+ + G+ + + + M K G+ N +I+
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL---MGKEGFSPNIYTYNAIIDG 444
Query: 666 WCE 668
C+
Sbjct: 445 LCK 447
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-EVY 312
PN T+ID G+++++ + + + + + NIY +N++ ++ K +L E Y
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI--IDGLCKKGSLDEAY 455
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + K+ G+ AD +Y IL+ C +T + + ++ K D+ +Y+T+
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM----LKVGFTPDIHSYTTL 511
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F K + + ++ E+ +S G+ P T++S+I G A+ LF+ M GC
Sbjct: 512 ISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+S L+ + + D A L+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLY 598
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + + + K + V A D K SPN+Y IID G+C G
Sbjct: 396 LVPNTNT-YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID--GLCKKGSLD 452
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + + + + + LM+V+ D +L + M K+G D+ SY L+
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C ++ ++ E L K TY++++ + +A+K+ + M +
Sbjct: 513 STFCRQKQMKESERLFEEAVSLGLIPTKK----TYTSMICGYCRYGNTSLAVKLFQRMSN 568
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
G P++IT+ +LI+ ++ A +L++ M+ G P
Sbjct: 569 HGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYD-GNTDRI----SNMEHKDKQSITNT 493
+ A R+ S L + +G D NT+++ ++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 74/358 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 356 ------------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+G LD+ Y+ ++ +F D + ++ DM G P+
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK--- 512
L H T N + N S +F + S K
Sbjct: 641 DMGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 513 ------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 679 KMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 665 EWCE 668
C+
Sbjct: 520 GLCQ 523
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ +P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
T++ R+ H + + + DM K G K N LI C
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
>gi|299471432|emb|CBN79384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 60/394 (15%)
Query: 237 LVSALRAYDASKKHLSSPNM-YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
+V A R + AS++ Y+ +I G G++ + A+ ++ + V N+Y++N
Sbjct: 4 VVPASRLHQASQRQTEQKQKDYL--HLIKAAGFRGNWREVAALVSEMGGKGVEGNVYIYN 61
Query: 296 SLMNVNAH-----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ + A + + L V +++ + D SYN + G+ A+ + G +
Sbjct: 62 TAIAAMARCGRPREAEALLTVM--LERDSIAPDTISYNSAINGHARCGDLDAARRLLGRM 119
Query: 351 KHLEAKG-VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + G +L D FTY+ + A A +V + M AGVTPN IT++S + AC
Sbjct: 120 TELASGGALLHPDQFTYNAVANAAAKRGDAVAAAEVLKMMAEAGVTPNIITYNSCLAACK 179
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + +A+ L E M + G +P+ RS++ + +
Sbjct: 180 AKGDLRRAVVLLEIMREDGIDPDQ-----------------------RSYSAAIATAGIR 216
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
++ + M +D P T T+N +KA +
Sbjct: 217 GLWEEVQGFLETMREED------------------------LTPDTVTFNTAIKAVADNG 252
Query: 530 Y--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+L+ EM+ GL+P+ IS+ ++ ACG +G + AL++L+ MR+ G++P+ Y+
Sbjct: 253 QCDVAFSLLAEMKNEGLTPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYS 312
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
A+ C ++ R ++A +L M+ ++ + Y
Sbjct: 313 AAMDACGKAGRQREALALLGHMRKAGVRADTACY 346
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 14/281 (4%)
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCC 436
W ++A V E M GV N +++ I A A G +A L ML+ P++
Sbjct: 38 WREVAALVSE-MGGKGVEGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISY 96
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N + D A RL T + AL + ++N K ++
Sbjct: 97 NSAINGHARCGDLDAARRLLGRMTELASGGALLHPDQFTYNAVANAAAKRGDAVAA---- 152
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
+ P TYN + AC D R L+ MR G+ P+ S++
Sbjct: 153 ---AEVLKMMAEAGVTPNIITYNSCLAACKAKGDLRRAVVLLEIMREDGIDPDQRSYSAA 209
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G G E L+ MRE+ ++PD V + TAIK + + AFSL EMK+ +
Sbjct: 210 IATAGIRGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEMKNEGL 269
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
P+ ++Y +L A G+ E + L + +DM +AG N
Sbjct: 270 TPDQISYNGVLGA---CGNAGEWKAALRLLEDMRQAGVTPN 307
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D V+A + +PN+ + + C GD ++ + E +R + +
Sbjct: 145 KRGDAVAAAEVLKMMAEAGVTPNIITYNSCLAACKAKGDLRRAVVLLEIMREDGIDPDQR 204
Query: 293 VFNS-LMNVNAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+++ + L ++ + + M++ + D ++N +KA G +A + E+
Sbjct: 205 SYSAAIATAGIRGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEM 264
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K+ +G L D +Y+ ++ +A W+ AL++ EDM AGVTPN +S+ ++AC
Sbjct: 265 KN---EG-LTPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYSAAMDACGK 320
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
AG +A+ L M +AG ++ C N + AC A + A +L + L
Sbjct: 321 AGRQREALALLGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQEMKL 371
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 136/367 (37%), Gaps = 95/367 (25%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+ ++ CG G++ + + ED+R VT N Y +++ M+ A + L
Sbjct: 270 TPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYSAAMDACGKAGRQREALA 329
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M+K GV AD A YN + AC +A + A ++ E+K A T
Sbjct: 330 LLGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQEMKLGVAGAASGGAPGGGGTA- 388
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM------------ 418
+ P+ ++++S I ACA A V++A+
Sbjct: 389 ------------------GVEVAPPPDVVSYASAITACARARRVDEALGLLSELRVNEAQ 430
Query: 419 -------------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
L +EM+ AG PN C+ ++ A + +RA L R
Sbjct: 431 AAAAAAGDVACGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMRRL------ 484
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
SH F+P+ TY ++
Sbjct: 485 ---------------------------------QSH--------GFEPSLYTYETIVWGF 503
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ A+ + + +GL P+ SW I AC +G+ E AL +L MR+ G+ P
Sbjct: 504 AKEANWAAAVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHWERALALLADMRKQGIRPSK 563
Query: 584 VAYTTAI 590
V YT A+
Sbjct: 564 VTYTAAV 570
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R ALM +++ G P+ ++ ++ N A++ L + G+ P V ++ AI
Sbjct: 476 RAVALMRRLQSHGFEPSLYTYETIVWGFAKEANWAAAVRFLAYVLGLGLQPSVRSWDAAI 535
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA--RSRY 631
C ++ ++A +L +M+ I+P+ VTY + R RY
Sbjct: 536 AACSQAGHWERALALLADMRKQGIRPSKVTYTAAVVGINRRRY 578
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM GL PN I ++ A G E A+ +++ ++ G P + Y T +
Sbjct: 445 LLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMRRLQSHGFEPSLYTYETIVWGFA 504
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ A + +QP++ ++ + A S+ G ++ LA+ DM K G +
Sbjct: 505 KEANWAAAVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHW---ERALALLADMRKQGIRP 561
Query: 655 ND-TYLKELI 663
+ TY ++
Sbjct: 562 SKVTYTAAVV 571
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 178/384 (46%), Gaps = 35/384 (9%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 242 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 358 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 399
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
L + M + G ND LI
Sbjct: 520 LL---RKMEEDGNAPNDCTYNTLI 540
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 194/423 (45%), Gaps = 39/423 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 181 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 294
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ VF Q A ++ ++M++ G++PN IT+++L++ + +A ++ + M++ C
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNME 483
P+ L++ + D ++FR+ + + VA Y + +I E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS-KRGLVANAVTYSILVQGFCQSGKIKLAE 413
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++ P TY IL+ C + KAL +++
Sbjct: 414 ELFQEMVSH-----------------GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ + +T +I+ G VE A + + G+ P+V+ YT I + L +
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L +M+ PN TY TL+RA R G L + + ++M G+ A+ + +K
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK---LIEEMKSCGFSADASSIKM 573
Query: 662 LIE 664
+I+
Sbjct: 574 VID 576
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 56/353 (15%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 233
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 294 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 317
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 318 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 367 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++TY LL G L ++ L +++D+ K+ +IE C+G
Sbjct: 427 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 158/356 (44%), Gaps = 23/356 (6%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
V G+C G + + +D+ S+ + N+ FN L++V + K E+YK M G+
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F L K+++ LG T I M K + + N
Sbjct: 436 DGLCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL---- 485
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+ S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 486 -FCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQ 613
G++ + ++++ M+ G S D + I + + + KRL + L + K Q
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQ 599
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 158/366 (43%), Gaps = 60/366 (16%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 96 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG----YEPDTTTF 151
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + + V + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 152 NTLIKGLFLEGKVSEAVVLV-DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 246
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 247 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ + M + P++VT+ +L++ Y + V + V++++ K G AN L
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399
Query: 663 IEEWCE 668
++ +C+
Sbjct: 400 VQGFCQ 405
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YS K + ++P TTT+N L+K + +A L++ M G P+ +++ +++
Sbjct: 133 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 192
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ AL +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 193 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 252
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+VTY +L+R + G ++ L +DM N L++ + EG +Q+ N+
Sbjct: 253 VVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 186/435 (42%), Gaps = 43/435 (9%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E+ +Q +N LM+ A L ++ + + G+ D + N LLK
Sbjct: 141 NRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLK 200
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A T +E + H ++ + +YS ++K D Q AL + + M
Sbjct: 201 CLCYANRT---EEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQ 257
Query: 393 G--VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G +P+ + +S++I+ N G +A LF EM + G +P+ N+++ A +A D
Sbjct: 258 GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM--EHKDKQSITNTPNFVP-N 499
+A + R T Q + G G + M E K + I PN V N
Sbjct: 318 KAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLI---PNIVTCN 374
Query: 500 SHYSS-------------FDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
S +S FD + KP +Y L+ ++ + + L N M++
Sbjct: 375 SFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN 434
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G++ N +TILI A G V+ A+ I M++ G+SPDVV Y+T I R RL A
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TYLKE 661
F +M IQPN Y ++++ +G L + ++ + +M G D +
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE---LVSEMINKGIPRPDIVFFSS 551
Query: 662 LIEEWC-EGVIQDKN 675
+I C +G + D +
Sbjct: 552 VINSLCKDGRVMDAH 566
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 37/340 (10%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK ++++ M+K G++ ++ + N L + C G + A E + + AKG K D+F
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF---DSMTAKG-HKPDIF 406
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y T++ +A + + + M S G+ N ++ LI+A A G+V+ AM +F EM
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G P+ + ++ F R RL + VA G NT S++
Sbjct: 467 QQQGVSPDVVTYSTVIST------FSRMGRLTDAMEKFNQMVARG--IQPNTAVYSSIIQ 518
Query: 485 ---------KDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
K K+ ++ N +P +P ++ ++ + C D + A
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIP-------------RPDIVFFSSVINSLCKDGRVMDA 565
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + +G P I++ LID G ++ A +IL M G+ PD+V Y T +
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++ R+ +LF EM+ ++PN VTY +L R G
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 152/354 (42%), Gaps = 38/354 (10%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVF-TYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C+ LA ++ V EA + + F TY+ ++ A+ + L + +L G
Sbjct: 128 CITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTG 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ + IT ++L+ A E+A++ L M + GC PN+ +I+L+A + RA
Sbjct: 188 LKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRA 247
Query: 453 FRLFRSWT----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
L + ++ + V G +G T + ++ H+
Sbjct: 248 LDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHE----------------- 290
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN+++ A C KA ++ +M T G P+ ++++ +I
Sbjct: 291 ---MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYAT 347
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A ++ + M++ G+ P++V + + + R K+A F+ M +P++ +
Sbjct: 348 LGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFS 407
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
Y TLL + G ++ + ++ M G AN LI + + G++ D
Sbjct: 408 YCTLLHGYASEGCFADM---IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/463 (18%), Positives = 180/463 (38%), Gaps = 46/463 (9%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ DI +C + + + + +++ K + + N ++ +I G +
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ +++ Q V+ ++ ++++++ + + T +E + M G+ + A Y+ +++ C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 336 LAGNTVLAQEIYGEV------------------------KHLEAKGVLKL--------DV 363
+ G V A+E+ E+ + ++A + L V
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGV 581
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
T+++++ + A K+ + M GV P+ +T+++L++ G + + LF E
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFRE 641
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G +PN+ I+L A + A + F S T V + Y +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV-SIYGIILGGLCRNN 700
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
D+ I + + +FS T N + K K L + G
Sbjct: 701 CADEAIIL-------FQKLGTMNVKFSITILNTMINAMYKV--QRKEEAKELFATISASG 751
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ ++I G VE A + M + G+ P I++ + + +A
Sbjct: 752 LLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE-VQQCLAVYQ 645
+ ++ +I T +L SR G E ++ A YQ
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQ 854
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 217 VPRADILF-CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR DI+F + + K ++ A +D + P + ++ID + G K+
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
I + + V +I +N+L++ + + L +++ MQ+ GV + +Y I+L
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG TV A++ + E+ +E+ + + + Y I+ A+ + + + +
Sbjct: 661 LFRAGRTVAARKKFHEM--IESGTTVTVSI--YGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
V + +++INA E+A LF + +G PN +++
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 179/394 (45%), Gaps = 23/394 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + G+ K +++ L+ + ++ + L+N+ K + L++ K M
Sbjct: 416 IYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMM 475
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ + K LK DV Y+ I+ F
Sbjct: 476 KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF----TKDGLKPDVVLYNNIITAFCG 531
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + + M P T T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 532 MSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 591
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + +A + ++ G + + S+ +T
Sbjct: 592 YNALILGLVEKRKMAKAVAILDQMNVAGV---------GPNEHTYTTLMQGYASLGDTEK 642
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
Y S + + TY L+K+CC AL EM + N + I
Sbjct: 643 AF---QYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 699
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A +++ MR++G+ PD+ YT+ + C ++ +++A + +EM+ +
Sbjct: 700 LIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFG 759
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I+PNL TY TL+ +R S+ E + L+ +++M
Sbjct: 760 IKPNLKTYTTLINGWAR-ASMPE--KALSCFEEM 790
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 189/444 (42%), Gaps = 69/444 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E ++++ + + +V++SL++ A D++ L + M++ G+ + +Y
Sbjct: 288 GDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY 347
Query: 328 NILLKACCLAGNTVLAQEIYGE--------------------------------VKHLEA 355
+I++ G A + E V+ +E
Sbjct: 348 SIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEV 407
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G +P+ I++ LIN G V
Sbjct: 408 QGIDAPIDI--YHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKV 465
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGED- 471
+A+ + + M +G + N + ++L+ ++ + AF +F +T K V L +
Sbjct: 466 SKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNI 525
Query: 472 ---YDG--NTDR----ISNMEHKDKQSITNTPNFVPNSHYSS-----------FD--KRF 509
+ G N DR + M+ + + T T F+P H + FD +R
Sbjct: 526 ITAFCGMSNMDRAICMVKQMQKERYRPTTRT--FLPIIHGFARAGEMRRALEIFDMMRRS 583
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT TYN L+ KA ++++M G+ PN ++T L+ G+ E A
Sbjct: 584 GCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Q ++R +G+ DV Y +K C +S R++ A ++ +EM I N Y L+
Sbjct: 644 FQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDG 703
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G + E + Q M K G
Sbjct: 704 WARRGDVWEAADLM---QQMRKEG 724
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D PN + T++ GD K+ + LR++ + +++Y
Sbjct: 601 EKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVY 660
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 661 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADL---M 717
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GVL D+ TY++ V A Q A ++ ++M + G+ PN T+++LIN A
Sbjct: 718 QQMRKEGVLP-DIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWAR 776
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A + E+A+ FEEM A +P+ + L+ + + F +++
Sbjct: 777 ASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSY 819
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F + ++ AL +D ++ P ++ +I K+ AI + +
Sbjct: 557 FLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMN 616
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + + +LM A D + + + ++ G+ D+ +Y LLK+CC +G
Sbjct: 617 VAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRM- 675
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + AK + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 676 --QSALAVTKEMSAKNIPR-NTFVYNILIDGWARRGDVWEAA-DLMQQMRKEGVLPDIHT 731
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S +NAC AG +++A + +EM G +PN + L+ A ++A F
Sbjct: 732 YTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMK 791
Query: 461 LSK 463
L++
Sbjct: 792 LAE 794
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F ++ A+ +K P II G+ ++ I++
Sbjct: 520 VLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDM 579
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V + + + M GV + +Y L++ G+
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + + +++ +G L++DV+TY ++K + Q AL V ++M + + NT
Sbjct: 640 TEKAFQYFSVLRN---EG-LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF 695
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ LI+ A G V +A L ++M + G P+ + AC +A +A + +
Sbjct: 696 VYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQ 753
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 215/487 (44%), Gaps = 75/487 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN C T++D G ++ ++++ ++ + N+ N+++N + + T E+
Sbjct: 408 PNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEEL 467
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ D +Y L+ C G+ A +I E+++L V +++F S I
Sbjct: 468 FHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF--VPSVEMFN-SFITG 524
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F AK ++ +M + G++PNT+T+ +LI G + A L+ EM++ G +P
Sbjct: 525 LFI-AKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH------- 484
N C++L+ + D A + + L+ T + +D +T I + H
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQK--LADTDMI--QDCSASTLNIGKVAHIIESLAG 639
Query: 485 KDKQS-----------------ITNTPN---------FVP-NSHYSSF----------DK 507
+ QS + + N F+P N YSS D
Sbjct: 640 GNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDL 699
Query: 508 RFSFK---------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
F + P TYN L+ C + R +L N++++ G+SPN I++ LID
Sbjct: 700 AFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLID 759
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN A ++ + M ++G+ P V YT I +++A L ++M + P
Sbjct: 760 GHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDP 819
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG-YKANDT-YLKELIEEWCEGVIQDK 674
N +TY TL++ +R G++ + + +Y +M G AN T ++K+ E V+ K
Sbjct: 820 NFITYWTLIQGYARCGNMKAITK---LYNEMHICGLLPANWTGHVKQ-----AEPVVNSK 871
Query: 675 NQNQGEV 681
N + G V
Sbjct: 872 NLSVGHV 878
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 142/351 (40%), Gaps = 64/351 (18%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----EAKGVLKLDVFTY 366
V M GV +M YN ++ C G GEV+ L E +GV LD ++Y
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRM-------GEVEKLLQANEYRGV-NLDEYSY 343
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+V + + A + + M+ G T T+T+++L+N + G ++ A+ L+ ML+
Sbjct: 344 NTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLK 403
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN C+ LL +A + ++A L++ TL++
Sbjct: 404 RGVVPNEISCSTLLDGFFKAGKTEQALNLWKE-TLAR----------------------- 439
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
T N ++ C + +A L + M+
Sbjct: 440 -----------------------GLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSC 476
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LID G++ A QI M G P V + + I +K+ +
Sbjct: 477 PCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVND 536
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ EM + PN VTY L+ + G+LH+ C+ +Y +M + G K N
Sbjct: 537 IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDA--CI-LYFEMVEKGLKPN 584
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 19/247 (7%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L+ A A+AG ++ A+++F+EM +AG + CN LL V+A A +F+
Sbjct: 96 SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T L +D+ T I + + + +F+ D Y+
Sbjct: 156 RCAGT---LPDDF---TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNL------VAYH 203
Query: 520 ILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+M C T+ R L++ ++ GLSPN +++T+L+ G +E A +++K ++
Sbjct: 204 AVMDGYCRIGQTEVAR--KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIK 261
Query: 576 E-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E + + D VAY I + R++ A + +EM +Q N+ Y T++ + G +
Sbjct: 262 ENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321
Query: 635 HEVQQCL 641
EV++ L
Sbjct: 322 GEVEKLL 328
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 171/446 (38%), Gaps = 64/446 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK---LGVMADMASYNILLKAC 334
+ +++ V +N++V+N+++N L EV K +Q GV D SYN L+
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMIN-GYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGY 350
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A E + + TY+T++ F ALK+ ML GV
Sbjct: 351 CRKGFMTKAFE----TCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN I+ S+L++ AG EQA++L++E L G N N ++ + + A
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466
Query: 455 LF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH-YSSF---- 505
LF + W+ + DG ++ ++ + I FVP+ ++SF
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYC-KLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL 525
Query: 506 ----------DKRF-----SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
D R P T TY L+ C + + L EM GL PN
Sbjct: 526 FIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNL 585
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI-KVC-------------- 593
++L+ G V+ A +L+ + + M D A T I KV
Sbjct: 586 FICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSA 645
Query: 594 -----------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ R+ A +LFE++K P+ TY +L+ S GS +
Sbjct: 646 KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGS---IDLAFG 702
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE 668
+ +M A N LI C+
Sbjct: 703 LRDEMLSARLTPNIVTYNSLIYGLCK 728
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ +MR G P+ + I+ A G V A LK M E G+ ++VAY +
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
R + + A L ++ + PN+VTY L++ + G + E ++ + ++ K
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKI--V 267
Query: 654 ANDTYLKELIEEWCE-GVIQDKNQNQGEV 681
++ LI +C+ G ++D N+ + E+
Sbjct: 268 IDEVAYGALINGYCQRGRMEDANRVRDEM 296
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 43/317 (13%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 445 EACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITN 492
+ + A R+ S L + +G D N + +++ME + K
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK----- 577
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHIS 550
KP + TYN L+ D+ V+ +M +MR GL P +
Sbjct: 578 -------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 551 WTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ +IDA G ++ AL++ K M ++P+ V Y I + QA SL EEM
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 610 KHYQIQPNLVTYITLLR 626
K ++PN+ TY L +
Sbjct: 679 KMKMVRPNVETYNALFK 695
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 170/415 (40%), Gaps = 42/415 (10%)
Query: 250 HLSSPN-MYICRTIIDVCGICGDYMKSRA-----IYEDLRSQNVTLNIYVFNSLMNVNAH 303
H SPN +++ R I +C +RA I DL L FN+L++
Sbjct: 253 HGVSPNSVWLTRFISSLCK------NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 304 DLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVL 359
++ + ++ M ++ + D+ + IL+ C + A E++ ++ K + V+
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 360 KLDVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K D ++T++ KV + ++ +++K L PN +T++ LI+ AG +E
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMK---LEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A + M + +PN N ++ + A F E GN
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME--------KEGVKGN 475
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRV 532
+ H + + N ++ P Y L+ C D+ +
Sbjct: 476 VVTYMTLIH----ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ +++ G S + +++ +LI N E ++L M ++G PD + Y T I
Sbjct: 532 R-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ K + + E+M+ + P + TY ++ A Y S+ E+ + L +++DM
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDM 642
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 37/243 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTL 461
L
Sbjct: 642 MGL 644
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 666 WCE 668
C+
Sbjct: 521 LCQ 523
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 136/363 (37%), Gaps = 63/363 (17%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++ K + +N LL CL N +++ +K E K ++ DV T +
Sbjct: 280 DILSDLMKNKTPLEAPPFNALL--SCLGRNMDISRMNDLVLKMDEVK--IRPDVVTLGIL 335
Query: 370 VKVFADAKWWQMALKVKEDMLSAG------VTPNTITWSSLINACANAGLVEQAMHLFEE 423
+ ++ AL+V E M + ++I +++LI+ G +++A L
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 424 M-LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M L+ C PN+ N L+ A + + A + +S M
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETA-----------------------KEVVSRM 432
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMR 540
+ + KP T N ++ C + A++ +M
Sbjct: 433 KEDE------------------------IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ N +++ LI AC NVE A+ + M E G SPD Y I + +R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
A + E++K +L+ Y L+ + + ++ + DM K G K +
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLI---GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 661 ELI 663
LI
Sbjct: 586 TLI 588
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
T++ R+ H + + + DM K G K N LI C
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C K +++ M+ + PN ++ ++ + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M ++G+ +VV Y T I C +++A +E+M P+ Y L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
H+ + V + + + G+ + LI +C+
Sbjct: 524 VRRDHD---AIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 194/468 (41%), Gaps = 43/468 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYE 280
F REF ++ D ++R + ++ P+ +I +I V G G + K ++
Sbjct: 100 FAAVYREFSRRGDWQRSVRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFH 159
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DL + + T Y SL+ A + + + M+ GV A+YN +L AC A
Sbjct: 160 DLPADSRTALSY--TSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARAT 217
Query: 339 NTVLAQE----IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ + + ++ E++H + ++ D+ TY+T++ A A + ML AGV
Sbjct: 218 DPPVPFDMLLGLFAEMRH-DVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGV 276
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+T ++ +++A A AG + + LF EM G P+ L++A A
Sbjct: 277 LPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVA 336
Query: 455 LFR-------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ R + T + +V L D G R + ++ T P
Sbjct: 337 VLRQMQADGCAPTAATYRVLL--DLYGRQGRFDGVRELFREMRTAVP------------- 381
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P T TYN+L + V L ++M G+ P+ + ++ ACG G E
Sbjct: 382 -----PDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHE 436
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L + ++GM P AYT ++ + ++A+ F M P + TY +L
Sbjct: 437 DAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLA 496
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
++ G E + + + AG + N LIE +C+G D
Sbjct: 497 NVFAKGGLFQEAESIFSRMTN--SAGIQKNKDSFDALIEAYCQGAQLD 542
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 147/383 (38%), Gaps = 59/383 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--- 310
P+ R I+D GD + ++ ++ T + + LM + + T E
Sbjct: 278 PDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTR-VGATAEAVA 336
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + MQ G A+Y +LL G +E++ E++ + D TY+ +
Sbjct: 337 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMR-----TAVPPDTATYNVLF 391
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
VF D +++ +++ DML G+ P+ T ++ AC GL E A + + + + G
Sbjct: 392 SVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMV 451
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P ++ L++A A ++ A+ F T I ++
Sbjct: 452 PTAKAYTGLVEALGHAAMYEEAYVAFNMMT-----------------EIGSL-------- 486
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPN 547
PT TYN L + +++ + M + G+ N
Sbjct: 487 ----------------------PTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKN 524
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ LI+A ++ A++ MR+ +PD + + + + ++ FE
Sbjct: 525 KDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFE 584
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
E++ P+++ Y +L +R
Sbjct: 585 EIQSNMAVPSIIAYCMMLSLYAR 607
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 196/421 (46%), Gaps = 27/421 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ T++ G + ++ ++R+ NI FN+L+ ++ + KF ++V
Sbjct: 367 PDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKV 426
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +++ D+ ++N LL + G + ++ G K ++ G + + T++T++
Sbjct: 427 FDDIKLCNCSPDIVTWNTLL---AVFGQNGMDSQVSGIFKEMKRAGFVA-ERDTFNTLIS 482
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + A+ V + ML AGV P+ T+++++ A A GL EQ+ + EM C+P
Sbjct: 483 AYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKP 542
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSI 490
N + LL A + +R A E+ Y G+ + + + K +
Sbjct: 543 NELSYSSLLHAYANGKEIER-------------MNAFAEEIYSGSVETHAVL-LKTLVLV 588
Query: 491 TNTPNFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + + + + + +R P TT N ++ KA ++N M +P+
Sbjct: 589 NSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPS 648
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ L+ S N + + +IL+ + E GM PD ++Y T I R+ R+K+A +F
Sbjct: 649 LTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFS 708
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EMK + P++VTY T + + Y + + + V + M K G K + +++ +C
Sbjct: 709 EMKDSALVPDVVTYNTFI---ATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYC 765
Query: 668 E 668
+
Sbjct: 766 K 766
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 188/428 (43%), Gaps = 58/428 (13%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYK 313
Y C +I+ G Y + ++ ++ + +N ++NV + +
Sbjct: 196 YTC--LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVE 253
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT-----YST 368
M+ GV D+ +YN L+ +CC G+ +Y E HL + +KL+ FT Y+
Sbjct: 254 AMRSRGVAPDLYTYNTLI-SCCRRGS------LYEEAVHLFQQ--MKLEGFTPDKVTYNA 304
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF ++ Q A+KV ++M + G +P ++T++SLI+A A GL+E+A+ L +M+ G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---------YDGNTDRI 479
+P+ LL +A + D A ++F L V + GN +
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVF----LEMRAVGCKPNICTFNALIKMHGNRGKF 420
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKAL 535
+ M FD K + P T+N L+ + +V +
Sbjct: 421 AEM-------------------MKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGI 461
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM+ G ++ LI A G+ + A+ + K M E G+ PD+ Y + R
Sbjct: 462 FKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALAR 521
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+Q+ + EM+ + +PN ++Y +LL A Y + E+++ A ++++ + +
Sbjct: 522 GGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA---YANGKEIERMNAFAEEIYSGSVETH 578
Query: 656 DTYLKELI 663
LK L+
Sbjct: 579 AVLLKTLV 586
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 176/392 (44%), Gaps = 30/392 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLE 310
PN+ +I + G G + + +++D++ N + +I +N+L+ V N D + +
Sbjct: 402 PNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS-G 460
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M++ G +A+ ++N L+ A G+ A +Y + LEA GV+ D+ TY+ ++
Sbjct: 461 IFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM--LEA-GVVP-DLSTYNAVL 516
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A W+ + KV +M PN +++SSL++A AN +E+ EE+ E
Sbjct: 517 AALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVE 576
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
++ L+ ++ + +RAF R +S L
Sbjct: 577 THAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA----------------M 620
Query: 488 QSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGL 544
SI V +H +F F P+ TTYN LM + ++ + + ++ E+ G+
Sbjct: 621 LSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM 680
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ IS+ +I A +G ++ A +I M++ + PDVV Y T I +A
Sbjct: 681 KPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAID 740
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ M +P+ TY +++ + HE
Sbjct: 741 VVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHE 772
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+K+ A A + + + GV + ++ LINA +++G A++LF +M Q G
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDG 223
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P N++L + +G + T + M +
Sbjct: 224 CNPTLITYNVVLNVYGK----------------------MGMPWSNVTALVEAMRSR--- 258
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC---TDYYRVKALMNEMRTVGLS 545
P TYN L+ +CC + Y L +M+ G +
Sbjct: 259 ---------------------GVAPDLYTYNTLI-SCCRRGSLYEEAVHLFQQMKLEGFT 296
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ L+D G S + A+++L+ M +G SP V Y + I + L++A L
Sbjct: 297 PDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDL 356
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+M H I+P++ TY TLL + G + + V+ +M G K N LI+
Sbjct: 357 KTQMVHKGIKPDVFTYTTLLSGFEKAG---KDDFAIQVFLEMRAVGCKPNICTFNALIK 412
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ V +L V K L+ RA+ ++ SP++ ++ + G
Sbjct: 571 YSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMV 630
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I + T ++ +NSLM + + F + E+ + + + G+ D SYN +
Sbjct: 631 AKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTV 690
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V M+
Sbjct: 691 IYAYCRNGRMKEASRIFSEMK----DSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMI 746
Query: 391 SAGVTPNTITWSSLIN 406
G P+ T++S+++
Sbjct: 747 KQGCKPDQNTYNSIVD 762
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G +G V A +L ++ DG+ DV AYT I S R + A +LF +M+
Sbjct: 163 VIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD 222
Query: 613 QIQPNLVTYITLLRARSRYG 632
P L+TY +L + G
Sbjct: 223 GCNPTLITYNVVLNVYGKMG 242
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 218/510 (42%), Gaps = 58/510 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 130 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 244
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 245 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCP-----PNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 419 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
++ + E L + + G + +I GV+ +++ + + +
Sbjct: 538 TKDCNSEEA---LELLHGLVSNGVSPDIVTYSSII-----GVLSREDRVEEAIKMFHIVQ 589
Query: 689 --SQRPQSLLLEKVAVHLQKSAAENLAIDL 716
RP++++ K+ + L K + AID
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/557 (19%), Positives = 212/557 (38%), Gaps = 118/557 (21%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 183 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 239 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 283
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 284 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 453 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A+ L E+M++ GC PN N LL + C + A L
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL--------------- 553
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+SN P TY+ ++ + +A
Sbjct: 554 ----VSN----------------------------GVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + ++ +G+ P + + ++ A N +GA+ M +G P+ + Y T I+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 593 CVRSKRLKQAFSLFEEM 609
LK+ L E+
Sbjct: 642 LANEDFLKETRDLLREL 658
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 116 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 638 QQCL 641
++ L
Sbjct: 235 REFL 238
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 183/406 (45%), Gaps = 33/406 (8%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMASY 327
D MKS +Y ++ VT NI+ N+++N + ++ L V K +Q G+ D +Y
Sbjct: 186 DEMKS--VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA-GLSLDTFTY 242
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ C N A I+ + + KG L+ +V +Y+ ++ F +A+ ALK+
Sbjct: 243 TSLILGYCRNKNVDAANAIFLSMPN---KGCLRNEV-SYTNLIHGFCEARRVDEALKLFS 298
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M P T++ +I A G +A+++F+EM + C+PN +L+ + E
Sbjct: 299 QMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDS 358
Query: 448 QFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
FD A ++ L + V DG + + + S+ + N PN+
Sbjct: 359 NFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNAR--- 415
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
TYN L+ C + ++ +L+++M L PN +++ ILI G
Sbjct: 416 ------------TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++L +M E G+ PD Y+ I + +++A SLFE +K I+ N V Y
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TL+ + G + + + L M AG N LI+ +C+
Sbjct: 524 TLIDGYCKVGKVSDGRFLL---DKMLSAGCVPNSITYNSLIDGYCK 566
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 161/388 (41%), Gaps = 73/388 (18%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY M V ++ + N ++ C GN V A E+Y V + G L LD FTY++++
Sbjct: 191 VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA-ELY--VSKIVQAG-LSLDTFTYTSLI 246
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ K A + M + G N +++++LI+ A V++A+ LF +M + C
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P + +++ A + + A +F+ T Q
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQ------------------------- 341
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
PN H TY +L+ + C D + K ++N M GL P+
Sbjct: 342 -------PNVH---------------TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSV 379
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LID G AL+IL +M + SP+ Y I R K + +A SL +
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M ++QPN+VTY L+ + + G L + L++ M ++G + +EW
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSL---MNESGL---------VPDEWTY 487
Query: 669 GVIQDKNQNQGEVTLCRRTNSQRPQSLL 696
V D TLC+R + +SL
Sbjct: 488 SVFID--------TLCKRGLVEEARSLF 507
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 182/470 (38%), Gaps = 69/470 (14%)
Query: 244 YDASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
+D +KK L+ P++ +ID G C + + A I + S N + N +
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALID--GYCKKGLSASALEILSLMESNNCSPNARTY 417
Query: 295 NSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N L+ ++ + + M + + ++ +YNIL+ C G+ A Y +
Sbjct: 418 NELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA---YKLLSL 474
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ G++ D +TYS + + A + E + G+ N + +S+LI+ G
Sbjct: 475 MNESGLVP-DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V L ++ML AGC PNS N L+ + F A RL + + + Y
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTY 592
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--KPTTTTYNILMKACCTDYY 530
T I N+ D+ + + FD+ S P Y + A C+ +
Sbjct: 593 ---TILIDNLLKDDEF----------DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS-HG 638
Query: 531 RVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K L+ +M G+ P+ + +T+ IDA G G+++GA ILK M E G P Y+
Sbjct: 639 RLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYS 698
Query: 588 TAIKV-----------------------------CVRSKRLKQAFSLFEEMKHYQIQPNL 618
IK C R + LF +M + PN
Sbjct: 699 CLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNA 758
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY + + G L + ++ M + G N+ L+ C+
Sbjct: 759 NTYGKFITGLCKVGCLEVAHR---LFDHMKEKGQSPNEDIYNSLLGCSCQ 805
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 234 KRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KR LV R+ +++ K+ N I T+ID G C G R + + + S N
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLID--GYCKVGKVSDGRFLLDKMLSAGCVPN 553
Query: 291 IYVFNSLMN-----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+NSL++ N + + +++ M K + +Y IL+ A +
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDI---MIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ ++ + DVF Y+ + + + A + M + G+ P+T+ ++ I
Sbjct: 611 MFDQMLSTGSHP----DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN 432
+A G ++ A + + M + GCEP+
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPS 693
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 181/394 (45%), Gaps = 27/394 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYN 328
++++++ I+ D+ + V+ ++ F+SL+ V++ + L L +++M+ G++ D Y
Sbjct: 305 NFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYT 364
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C G A EI K LE LDV Y+TI+ K A + ++
Sbjct: 365 ILINGYCRNGMMSEALEIRD--KMLEQG--CALDVVAYNTILNGLCKKKLLADANALFDE 420
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ GV P+ T+++LI+ G + +A+ LF M Q +P+ NIL+ + +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK- 507
++A L+ +S+ Y + N+ FV + + +D+
Sbjct: 481 MEKANELWNEM-ISRKIFPNHISYAILVNGYCNL------------GFVSEA-FRLWDEM 526
Query: 508 -RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
R KPT T N ++K C D + + +M + G+ P+ I++ LI+ +
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYM 586
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A ++ M G+ PDVV Y + R R+++A + +M I P+ TY TL
Sbjct: 587 DKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTL 646
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ Y S +++ + +M + G+ +D +
Sbjct: 647 ING---YVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 180/442 (40%), Gaps = 97/442 (21%)
Query: 273 MKSRAIYEDLRSQNVTLNIY--------VFNSLMNVNAHDLKFTL--------------- 309
M+ + I+ D+ + N +N Y F + +++ LK TL
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 310 -----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
V+ M +G+ D +YN LL C N + A++I+ ++ H +GV D+
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH---RGV-SPDLI 326
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++S+++ V + AL DM ++G+ P+ + ++ LIN G++ +A+ + ++M
Sbjct: 327 SFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKM 386
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
L+ GC + N +L + A LF + T + G +GN
Sbjct: 387 LEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNM 446
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
+ ++ Q + KP TYNIL+ C T+ +
Sbjct: 447 GKALSLFGIMTQK--------------------NIKPDIVTYNILIDGFCKTTEMEKANE 486
Query: 535 LMNEMRTVGLSPNHISWTILIDA----------------------------CGG------ 560
L NEM + + PNHIS+ IL++ C
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 561 -SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG++ A + L M +G+ PD + Y T I V+ + + +AF L +M+ +QP++V
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVV 606
Query: 620 TYITLLRARSRYGSLHEVQQCL 641
TY +L R G + E + L
Sbjct: 607 TYNVILNGFCRQGRMQEAELIL 628
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 177/407 (43%), Gaps = 64/407 (15%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E LR + ++I NSL+ V + EVY + + G+ +
Sbjct: 125 YVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELN 184
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C ++ + +E KG+ D+ TY+T++ + A
Sbjct: 185 VYTLNIMVNALCKDHKI---DDVKPFLIDMEQKGIFA-DIVTYNTLINAYCREGLLGEAF 240
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M G+ P T++++IN G +A +F EML G P++ N LL
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL--- 297
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE+C+ ++ D S+M H+
Sbjct: 298 VESCR--------------------NNNFLEAKDIFSDMLHR------------------ 319
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGS 561
P +++ L+ + + +ALM +M+T GL P+++ +TILI+ +
Sbjct: 320 ------GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + AL+I M E G + DVVAY T + + K L A +LF+EM + P+ T+
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TL+ + G++ + L+++ M + K + LI+ +C+
Sbjct: 434 TTLIHGHCKEGNMG---KALSLFGIMTQKNIKPDIVTYNILIDGFCK 477
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 224 FCNF---VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
FC F + K+ ++ AL + + P++ +ID G C + K+ +
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID--GFCKTTEMEKANEL 487
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACC 335
+ ++ S+ + N + L+N +L F E ++ M + G+ + + N ++K C
Sbjct: 488 WNEMISRKIFPNHISYAILVN-GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 336 LAGNTVLAQEIYGE--------------------------------VKHLEAKGVLKLDV 363
+G+ A E G+ + +E KG L+ DV
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG-LQPDV 605
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ I+ F Q A + M+ G+ P+ T+++LIN + +++A +E
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDE 665
Query: 424 MLQAGCEPN 432
MLQ G P+
Sbjct: 666 MLQRGFVPD 674
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 185/415 (44%), Gaps = 74/415 (17%)
Query: 277 AIYED--LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL- 331
A+ ED LR + VFN++M V A +F ++ M+ + D+ S+N L+
Sbjct: 205 ALAEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 332 ---KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
K+ CLA L E+ EV+ + L+ D TY+T++ + A+ V E+
Sbjct: 265 ARAKSGCLAAGVAL--ELLHEVR----QAGLRPDAITYNTLISACSQGSNLDDAVAVFEE 318
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+++ P+ T++++++ G ++A +F+E+++ G +P++ N LL A +
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAK--- 375
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+G+ +R+ + + ++
Sbjct: 376 ------------------------EGDVERVERVCEELVKA------------------- 392
Query: 509 FSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ TYN I M L +EMR +G +P+ +++T+L+D+ G +
Sbjct: 393 -GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 451
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + G+ P +V ++ I +S R A F+ M ++P+ + Y+ +L
Sbjct: 452 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 511
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI--------EEWCEGVIQD 673
+R E ++ + +Y+ M K GYK +D + L+ + EGVIQD
Sbjct: 512 VFARS---DETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 563
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 60/396 (15%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYK 313
+ ++ V G + +R + + +R Q++ ++ FN+L+N A LE+
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+++ G+ D +YN L+ AC N A ++ E+ E + D++TY+ +V V
Sbjct: 283 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP----DLWTYNAMVSVH 338
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
Q A + ++++ G P+ +T++SL+ A A G VE+ + EE+++AG +
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N ++ + + D A L+ + ++I T
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLY----------------------------DEMRAIGCT 430
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISW 551
P+ V TY +L+ + ++ EM GL P +++
Sbjct: 431 PDAV-------------------TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTF 471
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ LI A SG + A + M E G+ PD +AY + V RS ++ L+ M
Sbjct: 472 SALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIK 531
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P+ Y LL A ++ E++ V QDM
Sbjct: 532 DGYKPDDGLYQVLLAALAKGNEHDEIE---GVIQDM 564
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 37/356 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT-YST 368
+V+ +MQ LG++ + + CC G A ++ + A+ + L++ +
Sbjct: 698 QVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDA----ARSDISLNILSCRVA 753
Query: 369 IVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ + K WQ A VK +GV + W++LI+A A +GL E A +F+ M++
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKK 811
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQVALG-EDYDGNTDRISN 481
G P + N +++A + + D + + + +SK+ V L E + D
Sbjct: 812 GPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEV 871
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
M+ + ++PN H Y I++ C + + V+ ++ EM
Sbjct: 872 MKIYNGM---KAAGYLPNMH---------------LYRIMISLLCHNKRFRDVELMVAEM 913
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ + L+ G+GN + +++ + E G+ PD Y T I + R+ R
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ F+L EM + P L +Y LL A G +Q ++++M GY+ N
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAAS---GKAKLWEQADLLFEEMRTKGYRLN 1026
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 35/375 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R A + P A I + + + +L A+ ++ P+++ ++ V G CG
Sbjct: 284 VRQAGLRPDA-ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYN 328
++ ++++L + + +NSL+ A D++ V + + K G D +YN
Sbjct: 343 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 402
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ G LA +Y E++ + D TY+ +V A KV E+
Sbjct: 403 TMIHMYGKMGRLDLALGLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEE 458
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M AG+ P +T+S+LI A A +G + A F+ M+++G +P+ ++L + +
Sbjct: 459 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 518
Query: 449 FDRAFRLFRSWTLSK-------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ L+R+ QV L GN EH + + + V
Sbjct: 519 TRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN-------EHDEIEGVIQDMEAV---- 567
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F P + +IL+KA C + +L+ G P+ S ++DA
Sbjct: 568 -------FEMNPLVIS-SILIKAECIS--QGASLLKRACLQGYEPDGKSLLSILDAYEKM 617
Query: 562 GNVEGALQILKIMRE 576
G E L +L+ +R+
Sbjct: 618 GKHEKGLSLLEWIRQ 632
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 215/520 (41%), Gaps = 41/520 (7%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICR-TIIDVCGIC 269
+++ IVP + F +F+ + + +A + D + + S N+ CR +I+ G
Sbjct: 703 MQFLGIVPSQKV-FPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKL 761
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
+ ++ + L+ Q ++ ++N+L++ A + ++ M K G + + S
Sbjct: 762 KLWQQAENFVKGLK-QESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESV 820
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N +++A + G E+Y V+ L+ + K+ T +++ FA A +K+
Sbjct: 821 NGMMRALIVDGRL---DELYVVVQELQDLDI-KISKSTVLLMLEAFAKAGDVFEVMKIYN 876
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +AG PN + +I+ + + EM AG +P+ N LL
Sbjct: 877 GMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG 936
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS---S 504
FDR ++ S + L D D I + + NF P ++
Sbjct: 937 NFDRTIEVYHSIL----EAGLEPDEDTYNTLI----------VMYSRNFRPEEGFTLLYE 982
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KR P +Y IL+ A + + L EMRT G N + +++ +
Sbjct: 983 MGKR-GLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNAR 1041
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N A +L M+EDG+ P + + S +A + +K ++ + + Y
Sbjct: 1042 NHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYS 1101
Query: 623 TLLRA--RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK--ELIEEWCEGVIQDKNQNQ 678
T+L A R+R SL + + L + +D + ++ ++++ L E+ + ++ K+
Sbjct: 1102 TVLDAYLRNRDYSLG-ITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQD 1160
Query: 679 GEVTLCRRTNSQRPQSL------LLEKVAVHLQKSAAENL 712
L R ++R SL LEK+ L+ SA+ N
Sbjct: 1161 CGFDLPIRLLTERTSSLFTEVDSFLEKLGT-LEDSASLNF 1199
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 177/427 (41%), Gaps = 63/427 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 127 PDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + + D+ YN ++ A C L E YG + KG+ DV TY+T+
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMC---KYQLVSEAYGLFSEMAVKGI-SADVVTYNTL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + PN T++ L++A G V++A + ML+A
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ + L+ + +A +F + +L
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL---------------------------- 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C + +AL EM + P
Sbjct: 333 -------------------MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LID SG + ++ MR+ G DV+ Y++ I ++ L +A +LF
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+MK +I+PN+ T+ LL + G L + Q+ V+QD+ GY N +I C
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE---VFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 668 -EGVIQD 673
+G++++
Sbjct: 491 KQGLLEE 497
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 170/408 (41%), Gaps = 62/408 (15%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ P++ + TIID +C + S A ++ ++
Sbjct: 172 NGVCKIGDTRAAIKFLRKIDG---RLTKPDVVMYNTIID--AMCKYQLVSEAYGLFSEMA 226
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +N+L+ LK + + M + ++ +YNIL+ A C G
Sbjct: 227 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K DV TYST++ + + A V M GVTP+ T+
Sbjct: 287 EAKSVLA----VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN +V++A++LF+EM Q P + L+ ++ R+ W
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC------KSGRISYVW-- 394
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D I M + + + TY+ L
Sbjct: 395 ---------------DLIDEMRDRGQPA------------------------DVITYSSL 415
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + R AL N+M+ + PN ++TIL+D G ++ A ++ + + G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+V Y I + L++A ++ +M+ PN T+ T++ A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 26/322 (8%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
LE KG+ + D+ T + ++ F V +L G P+T+T ++LI G
Sbjct: 85 LELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQVALGE 470
V++A+H +++L G + N L+ + A + R L+K V +
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVM-- 201
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCT- 527
Y+ D + + + + Y F + TYN L+ C
Sbjct: 202 -YNTIIDAMCKYQ-------------LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIV 247
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
L+NEM ++PN ++ IL+DA G V+ A +L +M + + PDV+ Y
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+T + +K+A +F M + P++ TY L+ + V + L ++++
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN---KMVDEALNLFKE 364
Query: 647 MWKAGYKANDTYLKELIEEWCE 668
M + LI+ C+
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCK 386
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 121/248 (48%), Gaps = 11/248 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC+ P I + + + ++ A ++A +P+++ +I+ G C + M
Sbjct: 298 ACVKPDV-ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 274 KSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ ++++ +N+ I ++SL++ + + + ++ M+ G AD+ +Y+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G+ A ++ ++K E ++ ++FT++ ++ + A +V +D+
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L+ G N T++ +IN GL+E+A+ + +M GC PN+ ++ A + +
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 450 DRAFRLFR 457
D+A +L R
Sbjct: 531 DKAEKLLR 538
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P + ++ID G+C G + +++R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRISYVWDLIDEMRD 402
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++SL++ N H L + ++ M+ + ++ ++ ILL C G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGH-LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG L+V+TY+ ++ + AL + M G PN T+
Sbjct: 462 DAQEVFQD---LLTKGY-HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
++I A ++A L +M+ G
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMK--ACCTDYYRVKALMNEM 539
H SI N + V S F++ + P +N ++ A Y +L + +
Sbjct: 31 HSQPPSIQNVDDAV-----SQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I+ ILI+ G + +L + + G PD V T IK ++
Sbjct: 86 ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K+A +++ Q N V+Y TL+ + G
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
>gi|242050202|ref|XP_002462845.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
gi|241926222|gb|EER99366.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
Length = 798
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 30/437 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G+ G+ ++
Sbjct: 182 PKLVVTYNTLIDLYGKAGRLKNALDMFLDMPAHGVMPDTYTFNTLINIFGLSGNSAQAEV 241
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y + K + D SY ILL+ C
Sbjct: 242 LFASMMVRGVKPDTKTYNVMMTVFASIGDLERVLKYYYQIGKACLHPDAVSYRILLQLLC 301
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+A E+ ++ + + G + + ++K++ D A+ E G
Sbjct: 302 ---ERKMAHEVEDLIEGILSSGC-SVHEQSLPIVMKMYVDLGLLDEAIAFFERHCR-GKG 356
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
++ +S++++A A GL E+A H+F G E + N++++A +A Q+DR L
Sbjct: 357 ISSKNFSAIMDAFAEKGLWEEAEHIFCSERGVGNEKDIVEYNVMIKAYGQAKQYDRVSSL 416
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
S + ++ V+ E Y+ S H+ K+ + K F+
Sbjct: 417 LES--MEESGVSSDECTYNSLIQMFSVGGFPHRAKKLLGKM-------------KDAGFE 461
Query: 513 PTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY+ ++++ C L NEM+T G+ PN I + ILID +GNV+ AL
Sbjct: 462 PKCETYSAIIRSYSCHCLVPEAIDLFNEMKTSGVEPNVIVYGILIDMFAETGNVKEALHY 521
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ + G+SP+ + T+ IK + K+A L+ M P+++ +L +
Sbjct: 522 SNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML---NL 578
Query: 631 YGSLHEVQQCLAVYQDM 647
Y L V + +++ +
Sbjct: 579 YAKLEMVTEAKEIFESL 595
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 24/368 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVM 321
G C AI + +RS V ++ ++ LM+ N ++ +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLK 333
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y LL+ G V E++G + + G+ D + +S ++ +A+
Sbjct: 334 PEITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYANQGKVDQ 389
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+++RA L + + L + + I + K+ + I + F
Sbjct: 450 GLCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF----- 499
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 --ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 620 TYITLLRA 627
TY +L
Sbjct: 618 TYNIILHG 625
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 179/461 (38%), Gaps = 73/461 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + +M G N + +I+ C+
Sbjct: 451 LCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSHCK 488
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 169/438 (38%), Gaps = 104/438 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + ++ SYNILLK C + +QE E+ H+ A G DV +Y+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLC---DENRSQEAL-ELLHMMADDRGGGSPPDVVSYT 200
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T++S+I A A +++AM + M++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-----VALGEDYDGNTDRISNM 482
G P+ N +L + Q A + + +L DY R M
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC--M 318
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--------------- 527
E + + S KR KP TTY L++ T
Sbjct: 319 EAR--------------KIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 528 ------DYYRVKALM----------------NEMRTVGLSPNHISWTILIDACGGSGNVE 565
D+Y L+ ++MR GL+PN +++ +I SG VE
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 566 GALQILKIMREDGMSPDVVAYTTAIK----------------------VCV--------- 594
A+ + M ++G+SP + Y + I +C+
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 595 ----RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ R+ ++ LFE M ++PN++TY TL+ G + E + L+ M
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS---GMVSV 540
Query: 651 GYKANDTYLKELIEEWCE 668
G K N LI +C+
Sbjct: 541 GLKPNTVTYSTLINGYCK 558
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 182/415 (43%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + + GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYANQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 204/458 (44%), Gaps = 33/458 (7%)
Query: 221 DILFCNF-VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ NF + K + A++ ++ + +P+++ T+I G+C G+ K+R
Sbjct: 96 DVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS--GLCKSGNLEKARE 153
Query: 278 IYEDL--RSQNVTLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ E++ R +I +N+L+N D++ LE+ M+ G D+ +YN ++
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C+AG V A EI + D+ T++T++ F A AL+V E+M
Sbjct: 214 ALCVAGRVVEAAEILKTMS-------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ P+ IT++ L+N G V+ A +L EE+++ G P+ L+ ++ + + A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 453 FRLFRSWTLSKT---QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+L + + + V++ T I SI+ + + S R
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI-----SDLVAR- 380
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TYN L+ C RV+ L +EM ++G PN ++ ++ G V+
Sbjct: 381 GYVPDVVTYNTLIDGLCK-ANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDD 439
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ M +P+VV YT+ I +S R+ A + + M+ + + Y L+
Sbjct: 440 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIV 499
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ G V + +A+Y +M G+ + + K L E
Sbjct: 500 SMIHGG---RVAEAMAMYDEMVARGFLPDGSTSKTLEE 534
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 182/398 (45%), Gaps = 44/398 (11%)
Query: 290 NIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+++ + H + T +VYK++ G ++ ++ IL++ C AG A E
Sbjct: 26 DVHSYNHLLDILVKSGHQFR-TGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEF 84
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ L+ V DV+ ++ ++ +F D Q A+K+ E+M S+ V P+ T++++I
Sbjct: 85 ---LRALDEFSVAP-DVYIFNFLIHGLFKDGNPDQ-AVKLFENMESSRVNPDIFTYNTVI 139
Query: 406 NACANAGLVEQAMHLFEEMLQAGCE--PNSQCCNILLQACV-EACQFDRAFRLFRSWTLS 462
+ +G +E+A L EEM++ G + P+ N L+ A + + + A + L+
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHYSSFDKRFSFKPTTTTYNIL 521
D I+ SI + + K S P T+N L
Sbjct: 200 GPA----------PDVIT------YNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTL 243
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C +AL + EM + P+ I++TIL++ G V+ A +L+ + G
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI---------QPNLVTYITLLRARSR 630
PDV+AYT+ + +S +++A L +EM +I P L TY +L +
Sbjct: 304 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
GS + + +++ D+ GY + LI+ C+
Sbjct: 364 DGS---ISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 398
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 192/454 (42%), Gaps = 53/454 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN---VTLNIYVFNSLMN--VNAHDLKF 307
SPN+ + +I G C +RA+ E LR+ + V ++Y+FN L++ +
Sbjct: 59 SPNLVTFKILIR--GNCKAGQATRAL-EFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQ 115
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+++++NM+ V D+ +YN ++ C +GN A+E+ E+ + G D+ TY+
Sbjct: 116 AVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEM--IRRGGKSAPDIVTYN 173
Query: 368 TIVK--VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
T++ + D + AL++ + M AG P+ IT++S+I+A AG V +A + + M
Sbjct: 174 TLINAGICKDGDVEE-ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM- 231
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C P+ N LL +A RA + D T ++ +
Sbjct: 232 --SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL----PDVITYTILVNGLCRV 285
Query: 486 DKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACC-----------TDYYRV 532
+ + + ++ R + P Y L+ C
Sbjct: 286 GQVQVA----------FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSA 335
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ EM ++ + P ++ I++ G++ A+ ++ + G PDVV Y T I
Sbjct: 336 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 395
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
++ R+++A L +EM PN VT +++ R G V ++ +M + +
Sbjct: 396 LCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVG---RVDDAWSLVVEMSRKRH 452
Query: 653 KANDTYLKELIEEWCEG-------VIQDKNQNQG 679
N LI+ C+ V+ D + QG
Sbjct: 453 APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQG 486
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV +Y+ ++ + + KV +D+L +G +PN +T+ LI AG +A+
Sbjct: 24 KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGED 471
+ + P+ N L+ + D+A +LF + S+ V G
Sbjct: 84 FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143
Query: 472 YDGNTDRISN-MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-CCTDY 529
GN ++ +E ++ + P+ V TYN L+ A C D
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIV-------------------TYNTLINAGICKDG 184
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+AL ++ M+ G +P+ I++ +I A +G V A +ILK M SPD+V +
Sbjct: 185 DVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFN 241
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + ++ L +A + EEM I P+++TY L+ R G +VQ + +++
Sbjct: 242 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG---QVQVAFYLLEEI 298
Query: 648 WKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ GY + L++ C+ G I++ ++
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 510 SFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+K +YN IL+K+ +R + ++ G SPN +++ ILI +G
Sbjct: 22 GYKHDVHSYNHLLDILVKS--GHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+ L+ + E ++PDV + I + QA LFE M+ ++ P++ TY T++
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ G+L + ++ L ++M + G K+
Sbjct: 140 SGLCKSGNLEKARELL---EEMIRRGGKS 165
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 194/453 (42%), Gaps = 80/453 (17%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E ++ + +N++++ DL+FTL ++ M K G+ D ++N LL A
Sbjct: 2 GVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAA 61
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A+ ++ E+ HL G+ + D++TY+T + ++A++V DM + G
Sbjct: 62 CSRVGHLEDARAVFDEMIHL---GIGR-DIYTYNTFIDAICKCGNMELAMQVLLDMEAKG 117
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN +T+S+LI+ + E+A+ L E+M + + C N LL V+A
Sbjct: 118 VKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKA------- 170
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
G I+N+ + ++ +
Sbjct: 171 --------------------GKYAEIANVCDEMEE--------------------LGIEK 190
Query: 514 TTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TYN L+ V L+ +MR G++P+ ++++ LID +G A +
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 250
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA---- 627
+E G+ PDVV +++ I ++ ++ A SL +M I+PN+VTY ++ A
Sbjct: 251 LDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKS 310
Query: 628 ------RSRYGSLHEV----QQCLAVYQDMWKAGYKANDT---------YLKELIEEWC- 667
S G + V Q + V + + G A D ++ EL ++
Sbjct: 311 KVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQ 370
Query: 668 EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKV 700
+GV + + C R NS +LLLE++
Sbjct: 371 QGVRPNVVTFSAILNACSRCNSFEDAALLLEQL 403
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 167/404 (41%), Gaps = 52/404 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN+ T+ID Y ++ + E ++S + L+ +N+L+ + K+ V
Sbjct: 120 PNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANV 179
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++LG+ D +YN L+ G + + V+ + +GV V TYST++
Sbjct: 180 CDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSIL---VQDMRKRGVAP-SVLTYSTLID 235
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ A A V D +G+ P+ + +SS I+ A GL+E A+ L +M + G +P
Sbjct: 236 IYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKP 295
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ A K++V + +D + I + I
Sbjct: 296 NVVTYNAIIDA------------------FGKSKVMMEDDSEVGDMGIVGVYGG---QIV 334
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
N V S+ D R + + + IL L +M G+ PN +++
Sbjct: 335 RVANPVSRGGRSATDVR--MRRSQELFFIL------------ELFQKMVQQGVRPNVVTF 380
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL-KQAFSLFEEMK 610
+ +++AC + E A +L+ +R D Y A + V S+ + QA SLF ++
Sbjct: 381 SAILNACSRCNSFEDAALLLEQLR----LFDNFVYGVAYGLLVGSREVWSQAQSLFNQLG 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
+ Y L +G + QQ + V+++ W
Sbjct: 437 RMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWENTW 480
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 169/405 (41%), Gaps = 81/405 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ +++ C G +RA+++++ + +IY +N+ ++ +++ ++V
Sbjct: 50 PDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQV 109
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV ++ +Y+ L+ A ++ ++K + ++LD Y+T++
Sbjct: 110 LLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMR----IQLDRVCYNTLLA 165
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A + V ++M G+ +T+T++SLIN G ++ L ++M + G P
Sbjct: 166 IYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAP 225
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ +A AF ++ + S +
Sbjct: 226 SVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLK-------------------------- 259
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
P+ V +SSF T N L++ + L+N+M +G+ PN +++
Sbjct: 260 --PDVV---LFSSF-------IDTLAKNGLIEWALS-------LLNDMTEMGIKPNVVTY 300
Query: 552 TILIDACGGSGNVEGALQILKIMRED----GMSPDVVAYTTAI-------------KVCV 594
+IDA G S K+M ED G V Y I V
Sbjct: 301 NAIIDAFGKS----------KVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDV 350
Query: 595 RSKRLKQAF---SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
R +R ++ F LF++M ++PN+VT+ +L A SR S +
Sbjct: 351 RMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFED 395
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 217 VPRADILFCNFVREFGK--KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ + + + + + +GK + D+VS L D K+ ++ P++ T+ID+ G +
Sbjct: 188 IEKDTVTYNSLINGYGKQGRLDIVSIL-VQDMRKRGVA-PSVLTYSTLIDIYSKAGMHGD 245
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +Y D + + ++ +F+S ++ A + +++ L + +M ++G+ ++ +YN ++
Sbjct: 246 AFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIID 305
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV----KVFADAKWWQ-----MAL 383
A G + + E EV + GV + + V + D + + L
Sbjct: 306 AF---GKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFIL 362
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ + M+ GV PN +T+S+++NAC+ E A L E++
Sbjct: 363 ELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQL 403
>gi|299116347|emb|CBN76149.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 181/464 (39%), Gaps = 112/464 (24%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---------------- 305
++ C G + + ++ ++ VT FN+++ H
Sbjct: 499 VLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREA 558
Query: 306 ---KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
LE+ +M++ GV D+ +YN L+ G A EI + G ++ D
Sbjct: 559 PRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPD 618
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL-- 420
V TY++ + A + A ++ +M G+ P+ +++S I+AC+ AG E+A+ L
Sbjct: 619 VITYNSAIAACASGGESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLR 678
Query: 421 ---------------------------------FEEMLQAGCEPNSQCCNILLQACVEAC 447
+EM G PN + +QAC
Sbjct: 679 AMEASNVVPDVIAMTACMDALAAGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGG 738
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q+ RA L +S +E++ +
Sbjct: 739 QWQRALEL-----------------------LSRLENRASGA------------------ 757
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT----VGLSPNHISWTILIDACGGS 561
T YN M AC T + R AL+ +M+ V P+ +++T I AC +
Sbjct: 758 ------TVQEYNCAMMACVTGGESGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSST 811
Query: 562 GNVEGALQILKIMREDG--MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL +L MRE G P++ +YT AI C R+++ ++A +L ++ + P+
Sbjct: 812 GKWDRALSLLDEMREAGPRTQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPA 871
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++ ++RA +R G H++ + + M +AG + + ELI
Sbjct: 872 SFNAVIRA-ARRGGQHKLS--MKLLASMVEAGLTPDGVTVGELI 912
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 161/402 (40%), Gaps = 57/402 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN----VTLNIYVFNSLMNV--NAHDLKF 307
P++ ++I+V G ++ I + + ++ V ++ +NS + + + K
Sbjct: 578 PDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPDVITYNSAIAACASGGESKK 637
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ M++ G+ D SY + AC AGN +E ++ +EA V+ DV +
Sbjct: 638 ASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNP---EEALRLLRAMEASNVVP-DVIAMT 693
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ A W A+ + ++M S GVTPN T+ + I AC G ++A+ L +
Sbjct: 694 ACMDALAAGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENR 753
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
Q N + ACV + RA L +K V G
Sbjct: 754 ASGATVQEYNCAMMACVTGGESGRALALLEQMKANKGGVNAG------------------ 795
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG-- 543
P TY + AC + + R +L++EMR G
Sbjct: 796 -------------------------PDMVTYTSAIMACSSTGKWDRALSLLDEMREAGPR 830
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN S+T I ACG + E A+ + + E+GMSPD ++ I+ R + K +
Sbjct: 831 TQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSM 890
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
L M + P+ VT L+ + S G + Q+ + + +
Sbjct: 891 KLLASMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVEIAE 932
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 53/275 (19%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-------CVEACQFDRAFRL 455
++++AC+ AG A+ + EM +AG P + N +L A + A R
Sbjct: 498 AVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKRE 557
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
W ++ + +++ME R +P
Sbjct: 558 APRWPMA-------------LELLADME------------------------RRGVEPDV 580
Query: 516 TTYNILMKACCTDYYRVKAL-----MNEMRTVG-LSPNHISWTILIDACGGSGNVEGALQ 569
TYN L+ R +AL MN G + P+ I++ I AC G + A Q
Sbjct: 581 VTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPDVITYNSAIAACASGGESKKASQ 640
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ MR G+ PD +YT+AI C ++ ++A L M+ + P+++ + A +
Sbjct: 641 LIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLRAMEASNVVPDVIAMTACMDALA 700
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
G E + + +M G N+ K I+
Sbjct: 701 AGGKWSE---AITILDEMRSKGVTPNERTYKAAIQ 732
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN + I CG G + ++ + L R+ T+ Y + V + L
Sbjct: 721 TPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGESGRALA 780
Query: 311 VYKNMQ--KLGVMA--DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + M+ K GV A DM +Y + AC G A + E++ EA + ++ +Y
Sbjct: 781 LLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMR--EAGPRTQPNIRSY 838
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A+ W+ A+ + +L G++P+ +++++I A G + +M L M++
Sbjct: 839 TAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSMKLLASMVE 898
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRL 455
AG P+ L+ + + ++D A R+
Sbjct: 899 AGLTPDGVTVGELISSLSDRGRWDDAQRV 927
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 112/291 (38%), Gaps = 25/291 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS---AGVTPNTITWSSLINACANAGLVE 415
L+ D+ Y T++K ++ + AL + M + AG+ + S+ ++AC+ A E
Sbjct: 298 LQADLDDYKTVLKGYSANRKQGKALFTVQTMSAVQQAGLVADIEMLSAAMDACSKARDTE 357
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA----LGED 471
A+H ++ ++ G +P+ + A A ++ A L W A G D
Sbjct: 358 GAVHFMDQAIRLGLKPDDTMFREAILAYSLAGKWVEARDLALQWRGQAPSPASSSTPGGD 417
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G + ++ NT D+ ++ T +
Sbjct: 418 GGGAVSVGLGISRPPPPTVCNTAILKAMGKAGKVDEAIAWLGDTYDAATATATAASGAGT 477
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ +R + +H S+ ++ AC +G AL +L+ M G++P+ VA+ T +
Sbjct: 478 TEDEQGSVRGF-VCLDHSSFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLA 536
Query: 592 VC-----------------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ R A L +M+ ++P++VTY +L+
Sbjct: 537 AFEHRAHSGGSSSGGGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLI 587
>gi|357473771|ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 217/514 (42%), Gaps = 75/514 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A + +V
Sbjct: 618 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDV 677
Query: 312 YKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M+ ++ D ++ L+KAC AG A+E+Y ++ KG ++ Y+
Sbjct: 678 IAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEV----YTIA 733
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V +DM GV P+ + S+LI+ +A +E A + ++ + G
Sbjct: 734 INSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARKEGV 793
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC +A + RA L+
Sbjct: 794 QIGIMTYSSLMGACSKAKNWQRALELYE-------------------------------- 821
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL ++EM+ +GL PN
Sbjct: 822 ---------------YLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLGLCPN 866
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ILI A ++E A +L ++DG +P ++ I +C+R R ++A + E
Sbjct: 867 SITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRCIIGMCLR--RFEKACLVGE 924
Query: 608 EMKHYQI-QP---NLVTYITLLRARSRYGSLHE-VQQCLAVYQDMWKAGYKANDTYLK-E 661
+ + +P N T + L+ R G+ + Q L+ K Y DTY++
Sbjct: 925 TVLSFDSGRPQVNNEWTSLALMVYRETIGAGEKPTSQILSQVLGCLKFPY---DTYVRNR 981
Query: 662 LIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQ--SLLLEKVAVHLQKSAA---ENLAIDL 716
L+E GV + ++ +L P+ S+L E + + S + + ID
Sbjct: 982 LVENL--GVTAESSKTSNLCSLIDGFGEYDPRAFSILEEAASYGVVPSVSLKMNPIVIDA 1039
Query: 717 RGLTKVEARIIVLAVLRMMKENYSLGTDEFHIML 750
+ L A + +L +L+ +K + G +I++
Sbjct: 1040 KELDAFTAEVYLLTILKGLKHRLAAGAKLPNIII 1073
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L D Y+T++ +
Sbjct: 550 LSTFNMLMSVCASSQDS----EGAFQVIQLLKDARLDPDCKLYTTLISTCGKCGKVDLMF 605
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI+ CA AG V +A + M + + N L+ AC
Sbjct: 606 EVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAAC 665
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP----- 498
++ RAF D I+ ME + + + + F
Sbjct: 666 AQSGAMARAF-----------------------DVIAEMEAEIQPIVPDHVTFGTLMKAC 702
Query: 499 --------NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
++++ K ++ Y I + +C D+ +++ ++M G+ P+
Sbjct: 703 AKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDE 762
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LID G + +E A IL+ R++G+ ++ Y++ + C ++K ++A L+E
Sbjct: 763 MFMSALIDVAGHAKKLEAAFDILQQARKEGVQIGIMTYSSLMGACSKAKNWQRALELYEY 822
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+K ++ + T LL A + Q+ L V +M G N LI
Sbjct: 823 LKSLKLVQTVSTVNALLTALC---DGDQFQKALEVLSEMKGLGLCPNSITFSILI 874
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 531 RVKALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ KA+ V L PN ++ +L+ C S + EGA Q+++++++ + PD YTT
Sbjct: 531 KQKAVNEAFDYVRLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTT 590
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I C + ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 591 LISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIMR 647
Query: 649 KAGYKANDTYLKELI 663
KA+ LI
Sbjct: 648 SKNVKADRVVFNALI 662
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R PT +T+N+LM C + ++V L+ + R L P+ +T LI CG G
Sbjct: 543 RLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDAR---LDPDCKLYTTLISTCGKCG 599
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++ + V +
Sbjct: 600 KVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFN 659
Query: 623 TLLRARSRYGSL 634
L+ A ++ G++
Sbjct: 660 ALIAACAQSGAM 671
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 191/433 (44%), Gaps = 51/433 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D + PN+ ++ G+C G ++RA+ +++ S ++ +
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS--GLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D + L ++ K GV+ + +ILL C G A+++
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ Y+T++ + + Q A + E M S + P+ IT+++LIN
Sbjct: 360 MLVH---TGLVPTTAI-YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
++ +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNV 475
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S V +G + +M HKD VPN+
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKD---------VVPNAQ--------------- 511
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN ++ A +A L+ +M++ G+S + ++ +L+ + ++ A +++ +
Sbjct: 512 VYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNL 571
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PDVV+Y T I C +A L +EM Y I+P L TY LL A G +
Sbjct: 572 TNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631
Query: 635 HEVQQCLAVYQDM 647
H++ +CL YQ M
Sbjct: 632 HDM-ECL--YQHM 641
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 27/381 (7%)
Query: 293 VFNSLMNVNAH-DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ SL++V H D++ + + G D ++N ++AC AG+ L + + +
Sbjct: 129 LLESLLSVGRHADVRAAFGL---LVAAGARPDTFAWNKAVQACVAAGD--LDEALAMLRR 183
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++G D F+Y+ ++ + ALKV ++M+ GV PN IT++++I+
Sbjct: 184 MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKG 243
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E L ++MLQ G +PN N+LL A + D L T S + + G
Sbjct: 244 GDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT-SYSMLPDGFT 302
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY--NILMKACCTDY 529
Y D ++ D +++ S F + Y +IL+ C D
Sbjct: 303 YSILFDGLTRT--GDSRTM-----------LSLFGESLKKGVIIGAYTCSILLNGLCKDG 349
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
KA ++ + GL P + LI+ +++GA I + M+ + PD + Y
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + +A L EM+ + P++ T+ TL+ A R G L ++C V DM
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL---EKCFTVLSDM 466
Query: 648 WKAGYKANDTYLKELIEEWCE 668
G K+N +++ +C+
Sbjct: 467 QDKGIKSNVISFGSVVKAFCK 487
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 34/375 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + V N +N++++ V DL+ + M + G ++ +YN+LL C
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + + E+ + D FTYS + + L + + L GV
Sbjct: 277 RAGRMDETRALMDEMTSYS----MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T S L+N G V +A + E ++ G P + N L+ + AF +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F +S + + Y+ + + ME IT + V S D
Sbjct: 393 FEQMKSRHIRPDHIT----YNALINGLCKMEM-----ITEAEDLVMEMEKSGVD------ 437
Query: 513 PTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ T+N L+ A Y R L +++M+ G+ N IS+ ++ A +G +
Sbjct: 438 PSVETFNTLIDA----YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPE 493
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ IL M + P+ Y + I + S +QAF L E+MK + ++ TY LL+
Sbjct: 494 AVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLK 553
Query: 627 ARSRYGSLHEVQQCL 641
+ + E ++ +
Sbjct: 554 GLCKNSQIDEAEELI 568
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ N+L+++ + + V+A + G P+ +W + AC +G+++ AL +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 571 LKIM-REDGMSP-DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
L+ M R +G P D +Y I RS + A +F+EM + PN +TY T++
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ G L + + M + G K N L+ C D+ +
Sbjct: 241 VKGGDL---EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETR 285
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 42/446 (9%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ T I G+C G + + + ++L +N LN + FN+++ L
Sbjct: 242 TPNVVTYGTYIK--GLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 299
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV+K M+ G++ D+ SY+IL+ C G A E++ E+++ G+L ++++YS
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN---SGILP-NIYSYSI 355
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F AL+V E+M ++G+ P+ ++S LI+ G ++ A+ +EEM
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR------SWTLSKTQVALGEDYDGNTDRISNM 482
P++ L++ ++ QF A + FR W + + Y D +
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRF-------------------SFKPTTTTYNILMK 523
+K N +F P S Y+ F R + P Y+ L+
Sbjct: 476 ALSEKFQ-ENGVHFNPYS-YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS 533
Query: 524 ACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
KA+M +M VG++ N ++TILI+ ++ A ++ K M+E + P
Sbjct: 534 CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYP 593
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D +AYT+ + + + +A +LF+EM PN+VTY + + Y L++ Q
Sbjct: 594 DQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI---NEYLKLNKNNQAH 650
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWC 667
+Y+ M + G + LI +C
Sbjct: 651 KLYEKMKERGVYPDQILYTMLIAAFC 676
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 46/421 (10%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G ++ +++++++ + ++Y ++ L++ + EV+K M+ G+
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ ++ SY+IL+ C G A E++ E+K+ G+L DV++YS ++ F
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKN---SGILP-DVYSYSILIDGFCRKGDMD 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+K E+M S +P+ + SLI + A+ F M + G P++ CN +L
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQ----SITNTPN 495
F++A L S + V Y+ RI +K + N
Sbjct: 463 SIYCRKPDFNKALAL--SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 496 FVPNS-HYSS----FDKR-------------------FSFKPTTTTYNILMKACCTDY-Y 530
+P+ +YS+ F KR F+ K T N+ + C D Y
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R+ M E R + P+ I++T L+ +G + A + M +G SP+VV YT I
Sbjct: 581 RLFKGMKESR---VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + QA L+E+MK + P+ + Y L+ A G ++ + A++ +M +
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAE---ALFDEMKQE 694
Query: 651 G 651
G
Sbjct: 695 G 695
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 51/400 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
F K+ + AL ++ K P++Y +ID G C GD + +E++ S N +
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILID--GFCRKGDMDSAIKFWEEMTSNNFS 417
Query: 289 LNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG--NTVLAQ 344
+ + + SL+ +F L+ ++ MQKLG+ D + N +L C N LA
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + GV + ++Y+ + + AL++ ML V P+ + +S+L
Sbjct: 478 S-----EKFQENGV-HFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A E+A+ LF +M + G N + IL+ + C+ D A+RLF+ S+
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591
Query: 465 ---QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTT 517
Q+A G NT ++ + FD+ R P T
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRAR-------------------ALFDEMSREGCSPNVVT 632
Query: 518 YNILMKACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y + +Y ++ L +M+ G+ P+ I +T+LI A +G + A +
Sbjct: 633 YTCFI----NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688
Query: 572 KIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M+++G +P+VV YT I ++ + QA L+EEM+
Sbjct: 689 DEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 153/395 (38%), Gaps = 67/395 (16%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ NV VF+ L+ V A + L+ V+ + G+ ++ S N LLK C +
Sbjct: 131 DVEKSNV-----VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLK-CLVED 184
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS----AGV 394
N V + EV K + ++ TY+ ++ F + ++ ++L +G
Sbjct: 185 NRVDGVRLLFEVL---IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE 241
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TPN +T+ + I GL A L + + + N+ C N ++ + D A
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 301
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F+ E K+ + P
Sbjct: 302 VFK-------------------------EMKNSGIL----------------------PD 314
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y+IL+ C +A + EMR G+ PN S++ILID G V+ AL++ +
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G+ PDV +Y+ I R + A +EEM P+ Y +L++ Y
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKG---YY 431
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ L ++ M K G + ++ +C
Sbjct: 432 KSKQFANALKEFRIMQKLGMWPDTIACNHILSIYC 466
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 205/506 (40%), Gaps = 90/506 (17%)
Query: 101 EGNVSKFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPLEL 149
+G + AS + EM SGI+ + R+GR+D V K++ G+ P +
Sbjct: 292 QGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILP-NI 350
Query: 150 FDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR----LPVKELDEEFRIVQLCVNKP 205
+ S L+ C+ G V+ +EV EE + LP I C K
Sbjct: 351 YSYS--ILIDGFCK----EGRVD---KALEVFEEMKNSGILP-DVYSYSILIDGFC-RKG 399
Query: 206 DVNLAIRY------ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
D++ AI++ P A +C+ ++ + K + +AL+ + +K P+ C
Sbjct: 400 DMDSAIKFWEEMTSNNFSPSA-FNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458
Query: 260 RTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
I+ + D+ K+ A+ E + V N Y +N ++ + L++ M K
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
V+ D+ +Y+ L+ C A + + +K K + +V TY+ ++ +F
Sbjct: 519 RNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKM--TKVGITFNVKTYTILINLFISDC 574
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+A ++ + M + V P+ I ++SL+ N G + +A LF+EM + GC PN
Sbjct: 575 KMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPN----- 629
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
C + +L + +N HK
Sbjct: 630 ----VVTYTCFINEYLKLNK----------------------NNQAHK------------ 651
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG-LSPNHISWTIL 554
Y +R + P Y +L+ A C + R +AL +EM+ G +PN + +T L
Sbjct: 652 ---LYEKMKERGVY-PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707
Query: 555 IDACGGSGNVEGALQILKIMREDGMS 580
I++ + A ++ + MR G+S
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 77/355 (21%)
Query: 347 YGEVKHLEAKGVLKLDVF-----TYSTIVKVFADAKW-WQMALKV-------KEDMLSAG 393
+G + ++ KG +++ F ++S I+ +A A W++ + + KE+ AG
Sbjct: 64 WGVAREIKFKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAG 123
Query: 394 --------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
V + + + LI A+ ++E A ++F G E N CN LL+ VE
Sbjct: 124 ELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVE 183
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ D LF
Sbjct: 184 DNRVDGVRLLFEVLI--------------------------------------------- 198
Query: 506 DKRFSFKPTTTTYNILMK------ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+F +P TY I+M C D R ++ ++ G +PN +++ I
Sbjct: 199 --KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G A ++++ + + + I + L +A +F+EMK+ I P++
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+Y L+ R G V Q V+++M +G N LI+ +C+ DK
Sbjct: 317 SYSILIDGFCRKG---RVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDK 368
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 197/438 (44%), Gaps = 35/438 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL + K +P+ T++D+ G++ ++ A++ D+ ++ + Y FN+++N
Sbjct: 448 ALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMIN 507
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E + M++LG D +Y L+ C GN +E + + +E +
Sbjct: 508 GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV---EEAFKVKEKMEKEA 564
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+L + Y++++ +K + + + +M G++PN +T+ +LI + G +++A
Sbjct: 565 ILP-SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY----- 472
+ +M++ G PN C+ ++ + + D A L + + V L Y
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK--MVNLDVFLDHGYFDRLH 681
Query: 473 ---DGNTD--RISNMEHKDKQSITNTPNFVPNSHYSSF---------DKRFS------FK 512
DGN D +I++ + +S + + V N + K FS F
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741
Query: 513 PTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L+ + + +L +EM GL+PN I++ LI+ SGN++ A ++
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ G++P+V++Y I ++ ++A L +M I P+L+TY L+ +
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861
Query: 631 YGSLHEVQQCLAVYQDMW 648
G + + L ++++
Sbjct: 862 QGDMGKATNLLDEMRELF 879
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 197/466 (42%), Gaps = 65/466 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+K + +A+ YD + P+++ C +++ C D + A+ +++ LN
Sbjct: 195 RKGESSNAILVYDHINRLGIVPDVFTCSIMVN--AYCKDGWVNVAVDFVKEMDYLGFELN 252
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +NSL++ V+ D++ V K M + G++ + + +L+K C A+++
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--------------- 393
E++ E + LD + Y ++ + A++++++ML+ G
Sbjct: 313 EMERSEG---MVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGY 369
Query: 394 --------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ P + ++S+L++ GLV +A+ ++ EML+ G + N
Sbjct: 370 CKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNV 429
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLS-KTQVALGE-DYDGNTDRISNMEHKDKQSIT 491
N LL+ F+ A + W L K V E Y D + M
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHV---WHLMLKRGVTPDEVSYCTLLDLLFKM--------- 477
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
F + ++ R + +T +N ++ C ++A N M+ +G P+ +
Sbjct: 478 -GEFFRALALWNDILAR-GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGV 535
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GNVE A ++ + M ++ + P + Y + I +SK+ ++ L EM
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ PN+VTY TL+ G L + Y DM + G+ N
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRL---DKAFTAYFDMIEKGFAPN 638
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 190/495 (38%), Gaps = 105/495 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P Y T++D G C + + ++AI Y ++ + N+ NSL+ + L
Sbjct: 392 PESYSYSTLMD--GFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 310 EVYKNMQKLGVMADMASY-----------------------------------NILLKAC 334
V+ M K GV D SY N ++
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509
Query: 335 CLAGNTVLAQEIYGEVKHL--EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE----- 387
C + A+E + +K L E GV TY T++ + + A KVKE
Sbjct: 510 CKMEKMIEAEETFNRMKELGFEPDGV------TYRTLIDGYCKLGNVEEAFKVKEKMEKE 563
Query: 388 --------------------------DMLS----AGVTPNTITWSSLINACANAGLVEQA 417
D+LS G++PN +T+ +LI + G +++A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ +M++ G PN C+ ++ + + D A L + + V L Y D
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK--MVNLDVFLDHGY---FD 678
Query: 478 RISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
R+ + + D Q I +T + K FS P + YNI + C K
Sbjct: 679 RLHKADDGNLDSQKIADTLD--------ESSKSFSL-PNSVVYNIAIAGLCKSGKVDDAK 729
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + + G SP++ ++ LI +GNV A + M + G++P+++ Y I
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+S L +A LF+++ + PN+++Y L+ + G+ E L + M K G
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREA---LDLRNKMLKEGIS 846
Query: 654 ANDTYLKELIEEWCE 668
+ LI +C+
Sbjct: 847 PSLITYSALIYGFCK 861
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 139/363 (38%), Gaps = 71/363 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K L V+ NM KLG + + S N LL + G + A +Y + L
Sbjct: 164 IKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRL----------- 212
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G+ P+ T S ++NA G V A+ +EM
Sbjct: 213 ----------------------------GIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM 244
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISN 481
G E N N L+ CV +RA +L + + +V L G R
Sbjct: 245 DYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYC-RQCK 303
Query: 482 MEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKA 534
+E +K + + + V + + Y +L+ C D R++
Sbjct: 304 LEEAEKVLREMERSEGMVLDEY---------------AYGVLIDGYCRVCKMDDAVRLR- 347
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+EM VGL N LI+ +G V A ++L M + + P+ +Y+T +
Sbjct: 348 --DEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFC 405
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R + +A S++ EM IQ N+VT+ +LL+ R G+ + L V+ M K G
Sbjct: 406 REGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAF---EDALHVWHLMLKRGVTP 462
Query: 655 NDT 657
++
Sbjct: 463 DEV 465
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W ++V ED +P + ++ G+++ A+H+F+ M + GC P+ + CN
Sbjct: 134 WNELVRVFEDF---KFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNR 188
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL + V + A ++ LG D T I + + +FV
Sbjct: 189 LLSSLVRKGESSNAILVYDHIN------RLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVK 242
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
Y F+ TYN L+ C + D R + ++ M G+ N ++ T+LI
Sbjct: 243 EMDY------LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296
Query: 557 ACGGSGNVEGALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+E A ++L+ M R +GM D AY I R ++ A L +EM + ++
Sbjct: 297 GYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR 356
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
NL L+ + G + E ++ L
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLL 382
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
D S K S PN + I + G+C G ++ I+ L + + + + + +L++
Sbjct: 698 DESSKSFSLPNSVVYN--IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYS 755
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A ++ + M K G+ ++ +YN L+ C +GN AQ+++ ++ HL+ L
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL-HLKG---LA 811
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V +Y+ ++ + + AL ++ ML G++P+ IT+S+LI G + +A +L
Sbjct: 812 PNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNL 871
Query: 421 FEEMLQAGCEPN 432
+EM + + N
Sbjct: 872 LDEMRELFADQN 883
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 44/429 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y ++S ++ ++ + L++ F L + +M +L + ++NI+L+ C A
Sbjct: 70 LYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIMLRHLCSA 127
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTP 396
G A E+ ++ A TY+T++ F Q AL + +M G+ P
Sbjct: 128 GKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRL 455
N T+ ++I+ G V++A+ +F+EML G +P + N L+ + + D A L
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-L 238
Query: 456 FRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNFVPNSH- 501
+R + + Y DG + + M K T N + N H
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298
Query: 502 -----------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
+ + +R + T TY L+ A L +E G+ P+
Sbjct: 299 KEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A L +E
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M IQP+LVTY TL+ S G +V+ L + +M G+ LI+ C+
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474
Query: 669 GVIQDKNQN 677
D +N
Sbjct: 475 NGQGDDAEN 483
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 178 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 237
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 293
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 386
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 387 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 487 EMVENGITPDDSTYISLIEG 506
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 190/439 (43%), Gaps = 42/439 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N +I ++++ G K+ A++ ++ + V L+ + +L++ +L +V
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + + ++ D YN+ + C+ G + A+ ++ +++ G LK D TY+T++
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESF---LEEMQSTG-LKPDQVTYNTMIAA 603
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ ALK+ M + + PN IT+S+LI AG VE+A +L EM +G P
Sbjct: 604 QSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED------------YDGNTDR-- 478
S +LQAC + + D + W ++ L D Y+G T +
Sbjct: 664 SLTHRRVLQACSQGRRSDLILEI-HEWMMN---AGLCADITVYNTLVRVLCYNGMTRKAM 719
Query: 479 --ISNMEHKDKQSITNTPNFVPNSHYSS--FDKRFS---------FKPTTTTYNILMKA- 524
+ M + T T N + H+ S D FS P T+N L+
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++NEM+ G+ P+++++ IL+ G N A+++ M G P V
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y I + + QA LF EM++ + P TY L+ S+ + EV++ L
Sbjct: 840 STYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL-- 897
Query: 644 YQDMWKAGYKANDTYLKEL 662
+DM + G+ + L +
Sbjct: 898 -KDMKEKGFSPSKGTLSSI 915
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 181/420 (43%), Gaps = 23/420 (5%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
++PN +ID +S ++ ++ S+ V +++ ++ +LM+ + K
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++++ + +Y +L+ A C AGN A+++ E +E K + +V T+S+I
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE---MEEKSI-SPNVVTFSSI 425
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ W A +M G+ PN +T+ ++I+ E A+ ++ EML G
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
E N + L+ + + ++A LFR +++ V L D+ T I
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFRE--MNERGVLL--DHVNYTTLI--------DG 533
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ T N + P YN+ + C ++ + EM++ GL P+
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +I A G AL++L M+ + P+++ Y+T I + +++A L
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM P +T+ +L+A S+ L +++ M AG A+ T L+ C
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQG---RRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 170/439 (38%), Gaps = 73/439 (16%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L++ +NSL++ D++ V + M+ GV D+ YN L+ C AG A+++
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V ++ GV + +V TY+ + + A + E+M+ GV P+ +T S+L+
Sbjct: 232 ---VDTMKRDGV-EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVG 287
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
G +A LF EM + G PN +L+ +A + + + L R +
Sbjct: 288 GLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVM 347
Query: 462 SKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFV-----------------PNSH 501
D+ +G D +M + S +TPN V
Sbjct: 348 DLIMYTALMDWLCKEGKIDEAKDM-FRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQV 406
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-- 557
S +++ S P T++ ++ + KA M EM+ G+ PN +++ +ID
Sbjct: 407 LSEMEEK-SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465
Query: 558 ----------------CGG-----------------SGNVEGALQILKIMREDGMSPDVV 584
C G +G +E A + + M E G+ D V
Sbjct: 466 KCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV 525
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
YTT I ++ L AF + +E+ + P+ V Y + G E + L
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL--- 582
Query: 645 QDMWKAGYKANDTYLKELI 663
++M G K + +I
Sbjct: 583 EEMQSTGLKPDQVTYNTMI 601
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 517 TYNILMKACCTDYY--RVKALMNEM-RTVGLSP-NHISWTILIDACGGSGNVEGALQILK 572
T N ++ C D R AL M R G+ + + W L+D G++E A + +
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G+ DVV Y + + R+ + A + + MK ++PN+VTY + Y
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFI---VEYC 255
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ V ++Y++M + G + L L+ C+
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCK 291
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + K L +A YD H SPN+ T++ G +S + +
Sbjct: 735 ITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNE 794
Query: 282 LRSQ-----NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++ + N+T +I V N + + +Y M G + +++YN L+
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVE---AVRLYCEMVGKGFLPKVSTYNALISDFSK 851
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+E++ E+++ +GVL TY +V ++ + K +DM G +P
Sbjct: 852 VGMMSQAKELFNEMQN---RGVLPTSC-TYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ T SS+ A + G+ +A L + + +
Sbjct: 908 SKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 162/410 (39%), Gaps = 64/410 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + N+Y N L+N H + F V + KLG D AS+
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L+K CL G GE HL K + + DV Y+T++ A+++
Sbjct: 150 LIKGLCLEGQI-------GEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + + +LI++ QA +LF EM+ G PN CN L+ A
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++ L SK
Sbjct: 263 GEWKHVNTLLNEMVDSKIM----------------------------------------- 281
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P + ++ A C + +A +++ M G+ P+ +++T LID +
Sbjct: 282 ------PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ +M G +P+V +Y T I + +R+ +A LFEEM ++ PN VTY TL
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ G L Q +A++++M G + + L++ C+ DK
Sbjct: 396 IHGLCHVGRL---QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 32/365 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V+T + ++ F A V +L G P+T ++++LI G + +A+HLF
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDR 478
++M+ G +P+ L+ + A RL RS Q V G
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT-------- 219
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCT--DYYRVKA 534
+ + KD+Q ++ F + + P T N L+ A C ++ V
Sbjct: 220 LIHSLCKDRQQ---------TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNT 270
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV-C 593
L+NEM + PN IS T ++DA G V A ++ +M + G+ PDVV YT I C
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHC 330
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+RS+ + +A +F+ M H PN+ +Y TL+ Y + + + + ++++M +
Sbjct: 331 LRSE-MDEAVKVFDMMVHKGCAPNVFSYNTLING---YCKIERMDKAMYLFEEMCRQKLI 386
Query: 654 ANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVA--VHLQKSAAE 710
N LI C G +QD E+ C + +LL+ + HL K+ A
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL 446
Query: 711 NLAID 715
AI+
Sbjct: 447 LKAIE 451
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 131/612 (21%), Positives = 240/612 (39%), Gaps = 124/612 (20%)
Query: 89 EFAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSIRE-----------GRIDCVVGV 135
+FA I+ S+ V +++++LSL +M + GI ++ R++ V
Sbjct: 76 DFAKILTSIT----KVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 136 LKKLNELGVAPLELFDGSGFK-LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEE 194
L K+ +LG P D + F L+K C +E +G E L K + E
Sbjct: 132 LAKILKLGCQP----DTASFTTLIKGLC--------LEGQIG-----EALHLFDKMIWEG 174
Query: 195 FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
F +PDV +++ + K +A+R + +K P
Sbjct: 175 F--------QPDV--------------VIYATLINGLCKTGHTSAAIRLLRSMEKGNCQP 212
Query: 255 NMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
++ + T+I +C D +++A ++ ++ ++ ++ NI NSL+ N + K
Sbjct: 213 DVVVYGTLIH--SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNT 270
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M +M + S ++ A C G A ++ V + GV + DV TY+ ++
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDV---VDMMFQSGV-EPDVVTYTALI 326
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+KV + M+ G PN ++++LIN +++AM+LFEEM +
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ N L+ + A LFR VA G+
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFRE------MVACGQ-------------------- 420
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNH 548
P TY IL+ C + + + AL+ + L P+
Sbjct: 421 ---------------------IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+TI+ID +G +E A + + G+ P+V Y + L +A LF E
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M + TY T+ + R +E + + + ++M G+ + + L+
Sbjct: 520 MDENACSADGCTYNTITQGFLRN---NETSRAIQLLEEMLARGFSCDVSTTTLLV----- 571
Query: 669 GVIQDKNQNQGE 680
G++ D +Q E
Sbjct: 572 GMLSDDGLDQSE 583
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 60/347 (17%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVK---HLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y +LL CC A ++I G ++ LE++G LK D Y++++ A A +
Sbjct: 298 YTMLLSVCCHA------KDIDGALRVLALLESRG-LKADCMFYTSLISACAKAGKVDLLF 350
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ +M AG+ N T+ ++I+ CA AG + +A + M+ +P+ N L+ AC
Sbjct: 351 QIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVKPDRVIFNTLINAC 410
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A RAF D +++M+ + TP
Sbjct: 411 TRAGAVQRAF-----------------------DVLTDMKAE------ATP--------- 432
Query: 504 SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
KP TY L+ AC + R + MR + + +T ++ AC
Sbjct: 433 -------IKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQK 485
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GNV+ AL + +++DG+ PD V ++ + ++ +++AFS+ MK ++P V Y
Sbjct: 486 GNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVY 545
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+L+ S G+ ++ L VYQD+ +G + + L+ CE
Sbjct: 546 SSLMGVCSNLGNW---EKALEVYQDIRSSGLQPTVSTFNALMTALCE 589
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 170/392 (43%), Gaps = 64/392 (16%)
Query: 274 KSRAIYED------LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
K+R ED L + TL Y + +A D+ L V ++ G+ AD Y
Sbjct: 274 KARGSVEDAFAFAKLMREFSTLQHYTMLLSVCCHAKDIDGALRVLALLESRGLKADCMFY 333
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ AC AG L +I+ E +E G+ + +V T+ ++ A A A
Sbjct: 334 TSLISACAKAGKVDLLFQIFHE---MEVAGI-EANVHTFGAMIDGCARAGQLPKAFGAYG 389
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC--EPNSQCCNILLQACVE 445
M+S V P+ + +++LINAC AG V++A + +M +P+ L+ AC
Sbjct: 390 IMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACAR 449
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + DRA ++++ R SN+
Sbjct: 450 AGEVDRALEVYQNM------------------RESNV----------------------- 468
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K + Y ++ AC AL+ ++++ G+ P+ + ++ L+DA G + +
Sbjct: 469 ------KGSPACYTAVVHACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQD 522
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E A I+ M+++G+ P V Y++ + VC ++A ++++++ +QP + T+
Sbjct: 523 IEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNA 582
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ A ++ + L++ QD+ +G N
Sbjct: 583 LMTALCEA---NQFTRALSILQDVKNSGIMPN 611
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMNV--NAHDLKFTL 309
P+ I T+I+ C G ++ + D++++ + + + +L++ A ++ L
Sbjct: 398 PDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACARAGEVDRAL 457
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EVY+NM++ V A Y ++ AC GN A +Y ++K K +K D +S +
Sbjct: 458 EVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDDLK----KDGVKPDEVFFSAL 513
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A + +M G+ P + +SSL+ C+N G E+A+ +++++ +G
Sbjct: 514 VDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGL 573
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFR 457
+P N L+ A EA QF RA + +
Sbjct: 574 QPTVSTFNALMTALCEANQFTRALSILQ 601
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 53/388 (13%)
Query: 65 RDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSLEMVASGIVK 122
R L + +Y + S AK G+++ I + V+ E NV F +M I
Sbjct: 324 RGLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAM---------IDG 374
Query: 123 SIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLE 182
R G++ G + V P + F L N C R +G V+ ++ ++
Sbjct: 375 CARAGQLPKAFGAYGIMISKNVKPDRVI----FNTLINACTR---AGAVQRAFDVLTDMK 427
Query: 183 EFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR 242
P+K PD + Y + I C E + ++ +R
Sbjct: 428 AEATPIK---------------PD---HVTYGAL-----ISACARAGEVDRALEVYQNMR 464
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+ SP Y ++ C G+ + +Y+DL+ V + F++L++
Sbjct: 465 ESNVK----GSPACYTA--VVHACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAG 518
Query: 303 H--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
H D++ + NM+K G+ Y+ L+ C GN A E+Y +++ L+
Sbjct: 519 HAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIR----SSGLQ 574
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V T++ ++ +A + AL + +D+ ++G+ PN I++S L+ AC + + A+ L
Sbjct: 575 PTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILLRACEKEKMADMALDL 634
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ L G +PN C+ + C++ Q
Sbjct: 635 YMTALSEGIKPNVGICDSITGLCLQQIQ 662
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P+ +I C G+ ++ +Y+++R NV + + ++++ + ++ + L V
Sbjct: 435 PDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLV 494
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +++K GV D ++ L+ A AG+ ++ + + +++ +G LK YS+++
Sbjct: 495 YDDLKKDGVKPDEVFFSALVDA---AGHAQDIEKAFSIIANMKKEG-LKPGAVVYSSLMG 550
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
V ++ W+ AL+V +D+ S+G+ P T+++L+ A A +A+ + +++ +G P
Sbjct: 551 VCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMP 610
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N +ILL+AC + D A L+
Sbjct: 611 NQISYSILLRACEKEKMADMALDLY 635
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 36/162 (22%)
Query: 535 LMNEMRTVG-LSPNHISWTILIDACGGSGNVE---------------------------- 565
L+ EM G L+ ++ + +AC G+VE
Sbjct: 249 LLGEMDKAGKLARMKVNHSKFYEACKARGSVEDAFAFAKLMREFSTLQHYTMLLSVCCHA 308
Query: 566 ----GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GAL++L ++ G+ D + YT+ I C ++ ++ F +F EM+ I+ N+ T+
Sbjct: 309 KDIDGALRVLALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTF 368
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++ +R G L + Y M K + LI
Sbjct: 369 GAMIDGCARAGQL---PKAFGAYGIMISKNVKPDRVIFNTLI 407
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 178/384 (46%), Gaps = 35/384 (9%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
L + M + G ND LI
Sbjct: 530 LL---RKMEEDGNAPNDCTYNTLI 550
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 56/353 (15%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++TY LL G L ++ L +++D+ K+ +IE C+G
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 157/354 (44%), Gaps = 23/354 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + K E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQ 613
G++ + ++++ M+ G S D + I + + + KRL + L + K Q
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQ 609
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 159/366 (43%), Gaps = 60/366 (16%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ + M + P++VT+ +L++ Y + V + V++++ K G AN L
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 663 IEEWCE 668
++ +C+
Sbjct: 410 VQGFCQ 415
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YS K + ++P TTT+N L+K + +A L++ M G P+ +++ +++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ AL +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+VTY +L+R + G ++ L +DM N L++ + EG +Q+ N+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I V G C G + +++++ S V ++ + L++ + L+ LE+++++QK
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + Y +++ C G A ++ L KGV K +V TY+ ++
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFC---SLPCKGV-KPNVMTYTVMISGLCKKGS 523
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M G PN T+++LI A G + + L EEM G ++ +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 439 LLQACVEACQFDRAFRLFRSWTLSK 463
++ + A + RL + LSK
Sbjct: 584 VIDMLLSAMK-----RLTLRYCLSK 603
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 195/429 (45%), Gaps = 41/429 (9%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD +K S N + + D G+ G+ ++SR + +I FN L++ A
Sbjct: 44 SYDYREKL--SRNALLNLKLDDAIGLFGEMVQSRPLP----------SIVEFNKLLSAIA 91
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + MQ L + D+ SYNIL+ C LA + G++ L +
Sbjct: 92 KMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--- 148
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ T S+++ + +K A+ + + M+ G P+T+T+++LI+ +A+ L
Sbjct: 149 -DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 207
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
++M+Q GC+P+ ++ + D A L + K + + Y+ D +
Sbjct: 208 VDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLC 266
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKAL 535
+H D ++ F+K + +P TYN L+ +C +Y R L
Sbjct: 267 KYKHID-------------DAFALFNKMETKGIRPDVFTYNSLI-SCLCNYGRWSDASRL 312
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++ M ++PN ++++ LIDA G + A ++ M + + PD+ Y++ I
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
RL +A +FE M PN+VTY TL++ + V++ + ++++M + G N
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKG---FCKAKRVEEGMELFREMSQRGLVGN 429
Query: 656 DTYLKELIE 664
LI+
Sbjct: 430 TVTYNTLIQ 438
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 174/406 (42%), Gaps = 59/406 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K+ D+ AL +K ++ I TIID G+C + A++ + ++ + +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIID--GLCKYKHIDDAFALFNKMETKGIRPD 289
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +NSL++ N + NM + + ++ +++ L+ A G V A+++Y
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 350 EM----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-------- 457
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
DG VP P TY+IL+ C
Sbjct: 458 ---SDG----------------------VP--------------PDIITYSILLDGLCKY 478
Query: 529 YYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
TT I R ++A +LF EMK P+ Y TL+RAR R G
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 584
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 160/367 (43%), Gaps = 58/367 (15%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + + + +E KG+ + DV
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI---DDAFALFNKMETKGI-RPDV 290
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
FTY++++ + W A ++ +M+ + PN +T+S+LI+A G + +A L++E
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ + L+ + D A +F ++ + +D
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD------------ 390
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMR 540
F P TYN L+K C RV+ L EM
Sbjct: 391 --------------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMS 422
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL N +++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L+
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A +FE ++ +++P++ TY ++ + G +V+ ++ + G K N
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 661 ELIEEWC 667
+I +C
Sbjct: 540 TMISGFC 546
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 152/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ + LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 147/364 (40%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
P+++ ++I G + + + ++ + + N+ F++L++ + K ++
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 498 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I +T +I G E A + + M+EDG PD Y T I+ +R + L
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593
Query: 607 EEMK 610
+EM+
Sbjct: 594 KEMR 597
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 218/510 (42%), Gaps = 58/510 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 161 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 218
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 219 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 275
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 276 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCP-----PNEVTFNTFICILCQKGLIEQATMLIEQMSE 449
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 450 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 508
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
++ + E L + + G + +I GV+ +++ + + +
Sbjct: 569 TKDCNSEEA---LELLHGLVSNGVSPDIVTYSSII-----GVLSREDRVEEAIKMFHIVQ 620
Query: 689 --SQRPQSLLLEKVAVHLQKSAAENLAIDL 716
RP++++ K+ + L K + AID
Sbjct: 621 DLGMRPKAVIYNKILLALCKRCNTDGAIDF 650
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 166/402 (41%), Gaps = 69/402 (17%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 214 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 270 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 314
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 315 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 368
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 483
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 484 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++A+ L E+M++ GC PN N LL + C + A L
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 581
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 147 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 638 QQCL 641
++ L
Sbjct: 266 REFL 269
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 130/612 (21%), Positives = 246/612 (40%), Gaps = 117/612 (19%)
Query: 96 SVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVLKKLNEL 142
++++ G+V KF SL G + S+ R+G+++ + +L+ + ++
Sbjct: 347 TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KM 405
Query: 143 GVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV 202
AP + + + +L + L +GE+E + + + ++E L + I +LC
Sbjct: 406 DAAP----NLTSYNILID---MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCK 458
Query: 203 NKP-----DVNLAIRYACIVPRADILFCNFVREFGKK----------------------- 234
+ + L + + P + + FC+ + G+
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDS-VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAV 517
Query: 235 ------RDLVSALRAYDASKKHLS------SPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
R+ R D K + SP++ + +D G+ K RA++E++
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI 577
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q +T ++ ++ L++ V K T +++ M++ G+ D +YNI++ C +G
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKV 637
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A ++ E+K KG L+ V TY +++ A A + E+ S V N +
Sbjct: 638 NKAYQLLEEMK---TKG-LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVV 693
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+SSLI+ G +++A + EE++Q G PN+ N LL A V+A + D A F+
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ--- 750
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
NM K P TY+I
Sbjct: 751 --------------------NM------------------------KNLKCPPNEVTYSI 766
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + + EM+ GL PN I++T +I GNV A + + + G
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD Y I+ + + A+ LFEE + + T + LL A + L +
Sbjct: 827 GIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAA 886
Query: 639 QCLAVYQDMWKA 650
AV ++M K+
Sbjct: 887 IVGAVLREMAKS 898
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 169/409 (41%), Gaps = 65/409 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ I+ G G ++ I E ++ + N+ +N L+++ A +L+ L+V
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKV 433
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M++ G+ ++ + NI++ C A A I+ + H V D T+ +++
Sbjct: 434 QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDH----KVCTPDSVTFCSLID 489
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + E ML +G TPN + ++SLI G E +++EM+ GC P
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N + +A + ++ LF E Q +T
Sbjct: 550 DLMLLNNYMDCVFKAGEIEKGRALF--------------------------EEIKAQGLT 583
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSP 546
P +Y+IL+ D Y+ L EM+ GL
Sbjct: 584 ---------------------PDVRSYSILIHGLVKGGFSKDTYK---LFYEMKEQGLHL 619
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+ID SG V A Q+L+ M+ G+ P VV Y + I + RL +A+ LF
Sbjct: 620 DTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF 679
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
EE K + N+V Y +L+ +G + + + + +++ + G N
Sbjct: 680 EEAKSKAVDLNVVVYSSLIDG---FGKVGRIDEAYLILEELMQKGLTPN 725
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 142/367 (38%), Gaps = 57/367 (15%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
AH+ L + + MQ++G + + L+ G A + E+K
Sbjct: 215 AHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK----SNSFNA 270
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D+ Y+ + F MA K ++ S G+ P+ +T++S+I A V++A+ LF
Sbjct: 271 DLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELF 330
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EE+ P N ++ +F+ A+ L
Sbjct: 331 EELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER----------------------- 367
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EM 539
KR P+ YN ++ C +V+ + E
Sbjct: 368 ------------------------QKRKGCIPSVIAYNCIL-TCLGRKGKVEEALRILEA 402
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ +PN S+ ILID +G +E AL++ M+E G+ P+++ I +++RL
Sbjct: 403 MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A S+F + H P+ VT+ +L+ R+G +V +Y+ M +G N
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHG---KVNDAYMLYEKMLDSGQTPNAVVY 519
Query: 660 KELIEEW 666
LI +
Sbjct: 520 TSLIRNF 526
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E QIL+ M G P + V+S++L++AF + E M+ ++ +P Y
Sbjct: 147 NLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYT 206
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
TL+ A S + HE L + + M + GY+ LI
Sbjct: 207 TLIGALS---AAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 176/409 (43%), Gaps = 51/409 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ + + NIY + + V A + + K M+ G D+ +Y +L+ A C
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALC 308
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+E+Y +++ K D+ TY T++ F + + + +M + G
Sbjct: 309 AAGKLDKAKELYTKMRASSHKP----DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYA 364
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T++ L+ A +G V+QA + + M G PN N L+ + + D A L
Sbjct: 365 PDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
Query: 456 F---RSWTLSKTQVA--LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--R 508
F S ++ T + L DY G P +F+K +
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGD-------------------PEKALDTFEKMKK 465
Query: 509 FSFKPTTTTYNILMKACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACG 559
P+ + AC Y + K + N++ GLSP+ +++ +++
Sbjct: 466 RGIMPS-------IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYS 518
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A ++L M +G PD++ + I ++ R+ +A+ +F +K ++ P +V
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVV 578
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY L+ + G L + L ++ M ++G N L++ C+
Sbjct: 579 TYNILITGLGKEGKL---LKALDLFGSMKESGCPPNTVTFNALLDCLCK 624
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 115/544 (21%), Positives = 228/544 (41%), Gaps = 96/544 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R GRID G+LK + + G P D + +L + L +G+++
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGP----DVVTYTVLIDA---LCAAGKLD------------ 314
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
KEL + R +KPD+ + + + +FG DL + R +
Sbjct: 315 --KAKELYTKMRASS---HKPDL--------------VTYITLMSKFGNYGDLETVKRFW 355
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
+ +P++ +++ G ++ + + +R + + N++ +N+L++ +N
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
L LE++ NM+ LGV SY + + G+ A + + ++K +G++
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK---RGIMP-S 471
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ + + A+ + A + D+ + G++P+++T++ ++ + AG +++A L
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EML GCEP+ N L+ +A + D A+++F
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL----------------------- 568
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K PT TYNIL+ + +KA L M+
Sbjct: 569 ------------------------KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMK 604
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN +++ L+D + V+ AL++ M SPDV+ Y T I ++ R
Sbjct: 605 ESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAG 664
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
AF + +MK + + P+ VT TLL + G + + + V + + ++G + ++
Sbjct: 665 YAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIK--IVMEFVHQSGLQTSNQVWG 721
Query: 661 ELIE 664
EL+E
Sbjct: 722 ELME 725
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 153/357 (42%), Gaps = 58/357 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++ M+ G ++ +YN+LL A G + E++ + +G K ++ T++
Sbjct: 808 LKLFVEMKNAGCCPNIFTYNLLLDA---HGKSKRIDELFELYNEMLCRGC-KPNIITHNI 863
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + AL + +++S +P T+ LI AG E+AM +FEEM
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ 923
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C+PN NIL+ +A + A LF+ K+
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMI--------------------------KE 957
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLS 545
I +P +Y IL++ C RV ++ E++ GL
Sbjct: 958 GI---------------------RPDLKSYTILVE-CLFMTGRVDDAVHYFEELKLTGLD 995
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +S+ ++I+ G S +E AL + M+ G+SP++ Y I + + QA +
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
FEE++ ++PN+ TY L+R S+ G+ + +V++ M G N +L
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGN---KDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 30/354 (8%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ F ++ MQK + + +Y + KA + G A G+++ + L+
Sbjct: 139 EDMAFVFDL---MQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMR----QAGFVLN 191
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++Y+ ++ + + ALKV + M+S G+ P+ T+S+L+ A M L E
Sbjct: 192 AYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLE 251
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRI 479
EM G PN I ++ A + D A+ + ++ G D Y D +
Sbjct: 252 EMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME----DEGCGPDVVTYTVLIDAL 307
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
DK T +SH KP TY LM D VK +
Sbjct: 308 CAAGKLDKAKELYT-KMRASSH----------KPDLVTYITLMSKFGNYGDLETVKRFWS 356
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G +P+ +++TIL++A SG V+ A +L +MR G+ P++ Y T I + +
Sbjct: 357 EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR 416
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL +A LF M+ + P +Y+ + YG L + ++ L ++ M K G
Sbjct: 417 RLDEALELFNNMESLGVAPTAYSYVLFI---DYYGKLGDPEKALDTFEKMKKRG 467
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + ALK+ +M +AG PN T++ L++A + +++ L+ EM
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
L GC+PN NI++ A V++ ++A L+ S S T G G +
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK--AG 907
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+ + P++ KP YNIL+ + L M
Sbjct: 908 RSEEAMKIFEEMPDY-------------QCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL++ +G V+ A+ + ++ G+ PD V+Y I +S+RL
Sbjct: 955 IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++A SLF EMK+ I P L TY L+ +G+ V Q +++++ G + N
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALIL---HFGNAGMVDQAGKMFEELQFMGLEPN 1067
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP+ TY+ LM A D + L+ EM T+GL PN ++TI I G +G ++ A
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
ILK M ++G PDVV YT I + +L +A L+ +M+ +P+LVTYITL+
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSK 341
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
YG L V++ + +M GY + L+E C+
Sbjct: 342 FGNYGDLETVKR---FWSEMEADGYAPDVVTYTILVEALCK 379
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 186/492 (37%), Gaps = 70/492 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D AL ++ KK P++ C + G +++ I+ D+ +
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + +N +M A + ++ M G D+ N L+ AG A
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++G +K L+ L V TY+ ++ AL + M +G PNT+T+++L
Sbjct: 563 QMFGRLKDLK----LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--LS 462
++ V+ A+ +F M C P+ N ++ ++ + AF + LS
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLS 678
Query: 463 KTQVAL-----GEDYDGNTD---------------RISN-----------MEHKDKQSIT 491
V L G DG + + SN +E + +++I+
Sbjct: 679 PDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAIS 738
Query: 492 NTPNFVPNS--------------------------HYSSFDKRFSFKPTTTTYNILMKAC 525
V NS + F K PT +YN LM
Sbjct: 739 FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL 798
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C L EM+ G PN ++ +L+DA G S ++ ++ M G P++
Sbjct: 799 LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I V+S + +A L+ E+ P TY L+ + G ++ + +
Sbjct: 859 ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAG---RSEEAMKI 915
Query: 644 YQDMWKAGYKAN 655
+++M K N
Sbjct: 916 FEEMPDYQCKPN 927
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 185/476 (38%), Gaps = 82/476 (17%)
Query: 225 CNFVREF----GKKRDLVSALRAYDASKKHL--SSPNMYICRTIIDVCGICGDYMKSRAI 278
CN++ EF G+ D+ +D +K + +PN Y+ TI I G ++
Sbjct: 125 CNYMLEFLRVHGRVEDMAFV---FDLMQKQVINRNPNTYL--TIFKALSIKGGIRQAPFA 179
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+R LN Y +N L+ + K L+VYK M G+ M +Y+ L+ A
Sbjct: 180 LGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGR 239
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+T ++ E++ L L+ +++TY+ ++V A A + + M G P
Sbjct: 240 RRDTGTIMDLLEEMETLG----LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T++ LI+A AG +++A L+ +M + +P+ L+ + R +
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355
Query: 457 RSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++ T + G D+ +M + VPN H
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDM-----LDVMRVRGIVPNLH------- 403
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
TYN L+ +AL N M ++G++P S+ + ID G G+ E
Sbjct: 404 --------TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEK 455
Query: 567 ALQILKIMREDG-----------------------------------MSPDVVAYTTAIK 591
AL + M++ G +SPD V Y +K
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMK 515
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ ++ +A L EM +P+++ +L+ + G + E Q +D+
Sbjct: 516 CYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I+E++ N ++N L+N A ++ +++K M K G+ D+ SY IL++
Sbjct: 915 IFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G A + E+K L D +Y+ ++ ++ + AL + +M + G++
Sbjct: 975 MTGRVDDAVHYFEELKLTG----LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS 1030
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P T+++LI NAG+V+QA +FEE+ G EPN N L++ ++ DRAF +
Sbjct: 1031 PELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSV 1090
Query: 456 FR 457
F+
Sbjct: 1091 FK 1092
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDY-----MKSRAIYEDLRSQNVTLNIYVF 294
A++ ++ + PN I +I+ G G+ + R I E +R + I V
Sbjct: 912 AMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
M D + ++ ++ G+ D SYN+++ + A ++ E+K+
Sbjct: 972 CLFMTGRVDD---AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKN-- 1026
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +++TY+ ++ F +A A K+ E++ G+ PN T+++LI + +G
Sbjct: 1027 -RGI-SPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084
Query: 415 EQAMHLFEEMLQAGCEPNS 433
++A +F++M+ GC PN+
Sbjct: 1085 DRAFSVFKKMMIVGCSPNA 1103
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 159/406 (39%), Gaps = 42/406 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFT 308
+P + +I G G +K+ ++ ++ N FN+L++ +A DL
Sbjct: 574 APTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL--A 631
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++ M + D+ +YN ++ G A Y ++K + + L Y+
Sbjct: 632 LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTL----YTL 687
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ V D + V E + +G+ + W L+ +E+A+ E ++
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLV--- 744
Query: 429 CEPNSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISN---- 481
C Q N++L C+ +A +LF +T S E Y+ D +
Sbjct: 745 CNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNIT 804
Query: 482 -------MEHKDKQSITN--TPNFVPNSHYSS--FDKRFSF---------KPTTTTYNIL 521
+E K+ N T N + ++H S D+ F KP T+NI+
Sbjct: 805 EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A KAL E+ + SP ++ LI +G E A++I + M +
Sbjct: 865 ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
P+ Y I ++ + A LF+ M I+P+L +Y L+
Sbjct: 925 KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK ++ A + K P++ +++ + G + +E+L+
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N ++N + L+ L ++ M+ G+ ++ +YN L+ AG A
Sbjct: 994 LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E++ + L+ +VFTY+ +++ + + A V + M+ G +PN T++ L
Sbjct: 1054 KMFEELQFMG----LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Query: 405 INAC 408
N C
Sbjct: 1110 PNKC 1113
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 190/476 (39%), Gaps = 71/476 (14%)
Query: 190 ELDEEFRIVQLCVNKPDVNLA---IRYACIVPRAD-----ILFCN---FVREFGKKRD-L 237
+LD R+V+ PD LA +R C R D + C V +G D
Sbjct: 86 DLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGY 145
Query: 238 VSALRAYDASK---KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
A R DA + PN Y +I G + ++ +D+ + ++ +
Sbjct: 146 CRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTY 205
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N L+ + +E+ M+ G + +YN+L+ C G+ A E+ +++
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL---LRN 262
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L + G K Y+T++K A+ W A ++ +ML PN T++ +I + G
Sbjct: 263 LPSHGC-KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L++QA+ L E+M + GC N N ++ E D A L LSK
Sbjct: 322 LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL-----LSKM-------- 368
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
K + KP TYN L+K C+ V
Sbjct: 369 ----------------------------------KSYGCKPDIVTYNTLLKGLCSAAQWV 394
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A LM+ M G P+++++ LI G + A+++ K M + G +P+ + Y+T I
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ +L QA LF EM H P+ + Y L + ++ E Q + QD
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 509
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 141/357 (39%), Gaps = 44/357 (12%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G A + +Y L C AG A+ + G + ++ + +TY+ ++ +
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP-------VQPNAYTYNPLIHTLCERGQ 182
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ AL V +DML G P+ +T++ L+ A QAM L + M GC PN+ N+
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN----TP 494
L+ D A L R+ H K S N
Sbjct: 243 LMDGMCGEGDVDDALELLRNLP----------------------SHGCKPSTVNYNTVLK 280
Query: 495 NFVPNSHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ D+ R + P T+N+++ + C +A L+ +M G +
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +I+ NV+GA+ +L M+ G PD+V Y T +K + + A L
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ M P+ VT+ TL+ + G + + + V++ M G N +I
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA---IEVFKQMPDKGCTPNSITYSTII 454
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 159/386 (41%), Gaps = 45/386 (11%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + + +R++ T N +N LM+ D+ LE+ +N+ G +YN
Sbjct: 218 YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 277
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+LK C A A E+ E+ + T++ ++ Q A+++ E M
Sbjct: 278 VLKGLCSAERWGDADELVTEMLRENCPP----NEATFNVVIYSLCRKGLLQQAIQLLEKM 333
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G T N +T++++IN V+ AM L +M GC+P+ N LL+ A Q+
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNT------------DRISNMEHKDKQSITNTPNFV 497
A L + T + L ++ NT D I + + T
Sbjct: 394 VDAEELMDNMTQNG---CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT------ 444
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
P + TY+ ++ A T + L NEM G +P+ I + +L
Sbjct: 445 ---------------PNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 488
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E A+Q ++ +++ G+SP V Y + R+ + + A + M
Sbjct: 489 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 548
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P+ +TY+ L+ + G L+E ++ L
Sbjct: 549 PDDLTYVILIEGLAYEGYLNEARELL 574
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++A C Y + L++ MR G +PN++++ +L+D G G+V+ AL++
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ + G P V Y T +K ++R A L EM PN T+ ++ + R
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G L QQ + + + M K G AN +I CE
Sbjct: 320 KGLL---QQAIQLLEKMSKHGCTANIVTYNAIINGLCE 354
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 59/339 (17%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D + + + E+ T N+ ++ SL L+ +++ + M K G A++ +YN +
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIY-SLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAI 348
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C N A + ++K K D+ TY+T++K A W A ++ ++M
Sbjct: 349 INGLCEQRNVDGAMGLLSKMKSYGCKP----DIVTYNTLLKGLCSAAQWVDAEELMDNMT 404
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G P+ +T+++LI GL+ A+ +F++M GC PNS + ++ +A + D
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+A LF + M HK F P+ Y
Sbjct: 465 QALELF-----------------------NEMGHK---------GFNPDKIYQ------- 485
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGA 567
L+ C D ++ + +R + G+SP+ + + ++ +G E A
Sbjct: 486 ----------LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 535
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I+ M G PD + Y I+ L +A L
Sbjct: 536 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 529 YYRVKALMNEMRTVG---LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y R L + R VG + PN ++ LI G V AL +L M G +PDVV
Sbjct: 145 YCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVT 204
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y ++ + + +QA L + M+ PN VTY L+ G +V L + +
Sbjct: 205 YNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEG---DVDDALELLR 261
Query: 646 DMWKAGYKAN----DTYLKELI--EEW 666
++ G K + +T LK L E W
Sbjct: 262 NLPSHGCKPSTVNYNTVLKGLCSAERW 288
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKS 275
P + F + +K L A++ + KH + N+ II+ G+C + +
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN--GLCEQRNVDGA 361
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++S +I +N+L+ +A E+ NM + G + D ++N L+
Sbjct: 362 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGF 421
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM---- 389
C G V A E++ K + KG + TYSTI+ A A AL++ +M
Sbjct: 422 LCQKGLMVDAIEVF---KQMPDKGCTP-NSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 390 ------------------------------LSAGVTPNTITWSSLINACANAGLVEQAMH 419
+G++P+T+ +++++ G E A+
Sbjct: 478 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 420 LFEEMLQAGCEPNSQCCNILLQA 442
+ M+ +GC P+ IL++
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEG 560
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + ++ + +M G + + +I+ C+
Sbjct: 456 IFDKWDKAKELIL---EMLDRGICLDTIFFNSIIDSHCK 491
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 184/400 (46%), Gaps = 27/400 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-- 309
PN Y +I+ G+C G+ ++ + E++ S+ + N +++ L+ ++ + +L
Sbjct: 453 PNAYTYGIMIN--GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E +NM K V+ D+ YN L+K G A+E Y +V+ K L D FTYS +
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ----KRGLVPDEFTYSGL 566
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + A ++ + ML++G+ PN T++ L+ + E+ + + ML +G
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQ 488
+P++ I+++ + + AF + + L D + IS + + D +
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVE----KNGLVPDLHIYSSLISGLCKMADME 682
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ + + +P YN L+ C D R + + + + GL P
Sbjct: 683 KAVGLLDEM---------AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T LID +G++ A + K M + G++PD Y C + L+QA L
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 793
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
EEM + + ++ + TL+R + G L E ++ L V D
Sbjct: 794 EEMFN-RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMD 832
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 196/481 (40%), Gaps = 67/481 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y T ++ D+ ++ ++E++R ++ +N +N +++ + ++
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D +Y L+ C G A+ + E + G LK +V Y+T+V
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDE---MSCSG-LKPNVVVYATLVD 358
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A + +M+SAGV PN I + +LI G + +A L EM++ G P
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ + L+Q + +H DK
Sbjct: 419 DTFTYHPLMQG--------------------------------------HFQHYDKDGAF 440
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + NS P TY I++ C + +A L+ EM + GL PN
Sbjct: 441 ELLNEMRNS---------GILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI G++ A + L+ M + + PD+ Y + IK R+++A + ++
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWCE 668
+ + P+ TY L+ + +L + Q L Q M +G K N DTY L E
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL---QQMLNSGLKPNADTYTDLL-----E 603
Query: 669 GVIQDKNQNQGEVTLCRRTNS-QRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARII 727
G + + + L S +P + + V +L +S EN+ + LT+VE +
Sbjct: 604 GYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS--ENMEVAFMVLTEVEKNGL 661
Query: 728 V 728
V
Sbjct: 662 V 662
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 153/379 (40%), Gaps = 32/379 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M LG+ N LLK A L ++ G +E G+ DV+TYST ++
Sbjct: 201 MGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG---FMEGAGIPP-DVYTYSTFLEAHC 256
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A+ + A KV E+M N +T++ +I+ +G VE+A EEM+ G P++
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAF 316
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSIT 491
L+ + + A L + S + V DG E D +
Sbjct: 317 TYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEM 376
Query: 492 NTPNFVPNS-HYSSFDK-------------------RFSFKPTTTTYNILMKACCTDYYR 531
+ PN Y + + + +P T TY+ LM+ Y +
Sbjct: 377 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDK 436
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
A L+NEMR G+ PN ++ I+I+ +G + A +L+ M +G+ P+ Y
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + + A E M + P+L Y +L++ S G + E ++ Y + K
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE---YYAQVQK 553
Query: 650 AGYKANDTYLKELIEEWCE 668
G ++ LI +C+
Sbjct: 554 RGLVPDEFTYSGLIHGYCK 572
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 197/456 (43%), Gaps = 36/456 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGIC--GDYMKSR 276
+++ V F K+ A A+D + +S+ PN + +I G+C G ++
Sbjct: 351 VVYATLVDGFMKEG---KAAEAFDILNEMISAGVQPNKIMYDNLIR--GLCKIGQLGRAS 405
Query: 277 AIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ + + ++ LM + +D E+ M+ G++ + +Y I++
Sbjct: 406 KLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGL 465
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + A + ++ + ++G LK + F Y+ ++ + +A + E+M A V
Sbjct: 466 CQNGESKEAGNL---LEEMISEG-LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++SLI + G +E+A + ++ + G P+ + L+ + ++A +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L + S L + D TD + + D + +++ + S S DK P
Sbjct: 582 LLQQMLNS----GLKPNADTYTDLLEGYFKSNDHEKVSS----ILQSMLGSGDK-----P 628
Query: 514 TTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y I+++ A M E+ GL P+ ++ LI ++E A+ +L
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++G+ P +V Y I RS + +A ++F+ + + PN VTY L+ +
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G ++ +Y+DM G A D ++ ++ C
Sbjct: 749 G---DITDAFDLYKDMLDRGI-APDAFVYNVLATGC 780
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 185/464 (39%), Gaps = 65/464 (14%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT-- 308
SP+ + +++ G+C G +++A+ +++ + N+ V+ +L++ + K
Sbjct: 312 SPDAFTYGALMN--GLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEA 369
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY--------------------G 348
++ M GV + Y+ L++ C G A ++ G
Sbjct: 370 FDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQG 429
Query: 349 EVKHLEAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+H + G +L + +TY ++ + A + E+M+S G+ PN
Sbjct: 430 HFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPN 489
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ LI + G + A E M +A P+ C N L++ + + A +
Sbjct: 490 AFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY- 548
Query: 458 SWTLSKTQVALGEDYDGNTD---RISNMEHKDK--QSITNTPNFVPNSHYSSFDKRFSFK 512
+ + V Y G + N+E D+ Q + N+ K
Sbjct: 549 AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNS----------------GLK 592
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L++ D+ +V +++ M G P++ + I+I S N+E A +
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L + ++G+ PD+ Y++ I + +++A L +EM ++P +V Y L+ R
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 712
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
G + + V+ + G N LI+ C+ G I D
Sbjct: 713 SGDISRARN---VFDSILAKGLLPNCVTYTALIDGNCKNGDITD 753
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I + + + K D+ A+ D K P + +ID G C GD
Sbjct: 661 LVPDLHI-YSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID--GFCRSGDIS 717
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++R +++ + ++ + N + +L++ N D+ ++YK+M G+ D YN+L
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLA 777
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A + L Q ++ + + +G + +F ST+V+ F Q K+ M+
Sbjct: 778 TGCSDAAD--LEQALF-LTEEMFNRGYAHVSLF--STLVRGFCKRGRLQETEKLLHVMMD 832
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ PN T ++I AG + +A +F E+ Q
Sbjct: 833 REIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 187/482 (38%), Gaps = 68/482 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + L +D K SP++ C I+ + K+ +Y + +
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L++ ++ L++ MQ+ G + +YN+L+ G A+ + G
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ K LK+ +TY+ ++ + + AL ++E+M+ G +P T++S I
Sbjct: 294 EM----LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQ 465
G + AM +ML P+ N L+ +AF LF RS L T
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409
Query: 466 VALGEDYDGNTDRISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V DG R +E + K + N P TY IL+
Sbjct: 410 VTYNTLLDGLC-RQGELEVAQQLKVEMINE----------------GIAPDIVTYTILVN 452
Query: 524 ACCT-------------------------------------DYYRVKALMNEMRTVGLSP 546
C D R +L EM G P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +++D GN+E A ++L+ M DG+ PD V YT+ I + + RL++ +F
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EM + P++VTY L+ + G L ++ + +M + G N LI
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRL---ERAFIYFSEMQEKGILPNVITYNSLINGL 629
Query: 667 CE 668
C+
Sbjct: 630 CK 631
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 157/352 (44%), Gaps = 49/352 (13%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ D+ SYN L+ C GN + A ++ E++ + L + TY+T++
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI----YLFPTIVTYNTLLDGLCRQGEL 425
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++K +M++ G+ P+ +T++ L+N G + A F+EML G E +S
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD--------------GNTDRISNMEHK 485
+ ++ RAF +L + +A G D GN + S + K
Sbjct: 486 IVGELKLGDTSRAF------SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
S P++V TY ++ A + + + + EM + G
Sbjct: 540 -MVSDGVIPDYV-------------------TYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+P+ +++T+LI G G +E A M+E G+ P+V+ Y + I + +R+ QA+
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAY 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ F EM I PN +Y L+ G+ Q+ L++Y+ M G + +
Sbjct: 640 NFFAEMVEKGIFPNKYSYTILINENCNMGNW---QEALSLYKQMLDRGVQPD 688
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 26/335 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ MK+ ++++LRS + I +N+L++ +L+ ++ M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y IL+ C G+ +AQE + E+ H +G L+LD + Y+T ++ + K
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLH---EG-LELDSYAYAT--RIVGELKLGD 494
Query: 381 M--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++E+ML+ G P+ I ++ +++ G +E+A L ++M+ G P+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ A +E + + +F LSK G T + H K + F+
Sbjct: 555 IIHAHLENGRLRKGREIFYE-MLSK-----GLTPSVVTYTVLIHGHAGKGRLERA--FI- 605
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
++S ++ P TYN L+ C +A EM G+ PN S+TILI+
Sbjct: 606 --YFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GN + AL + K M + G+ PD ++ +K
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 242 RAYDASKKHLS---SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+ ++ L+ P++ I ++D G+C G+ ++ + + + S V + + S
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVD--GLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ + + L+ E++ M G+ + +Y +L+ G A + E ++
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE---MQ 611
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG+L +V TY++++ + A +M+ G+ PN +++ LIN N G
Sbjct: 612 EKGILP-NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
++A+ L+++ML G +P+S + LL+ + C+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 182/439 (41%), Gaps = 61/439 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+K I+ + V Y ++ + + E + + + M G N++ LI+
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKR---WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 668 EGVIQDKNQNQGEVTLCRR 686
EG+ ++ + E LC R
Sbjct: 614 EGLAKEAQELLSE--LCSR 630
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 56/363 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+ + +M +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P+ R++ + D I H +
Sbjct: 281 GCTPD--------------------IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ M +PN V+Y +L+ G + ++ + M + G N LI
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE---LMSQMIQQGCPPNPVTFNTLINF 470
Query: 666 WCE 668
C+
Sbjct: 471 LCK 473
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 59/353 (16%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+L+ E ++ L+ +M++ +D L++ +C+ + D+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS---EMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 182/439 (41%), Gaps = 61/439 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+K I+ + V Y ++ + + E + + + M G N++ LI+
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKR---WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 668 EGVIQDKNQNQGEVTLCRR 686
EG+ ++ + E LC R
Sbjct: 614 EGLAKEAQELLSE--LCSR 630
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 56/363 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+ + +M +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P+ R++ + D I H +
Sbjct: 281 GCTPD--------------------IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ M +PN V+Y +L+ G + ++ + M + G N LI
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE---LMSQMIQQGCPPNPVTFNTLINF 470
Query: 666 WCE 668
C+
Sbjct: 471 LCK 473
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 59/353 (16%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+L+ E ++ L+ +M++ +D L++ +C+ + D+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS---EMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 176/411 (42%), Gaps = 36/411 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L + + ++ K P++ T+ID GD ++R ++ + S+ N+
Sbjct: 93 KSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV 152
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ K Q +DM++ G PN +T+++L+N
Sbjct: 213 SLR----DGSLRVSPDTVTFSTLIDGL--CKCGQTDEACNDDMIAGGYVPNVVTYNALVN 266
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSK 463
A +E+A + E M+ G P+ ++L+ A +A + D A L S +
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326
Query: 464 TQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V DG +DR S + + N P T+NIL
Sbjct: 327 NVVTFNSIIDGLCKSDR-SGEAFQIALQVYNR----------------MLVPDKVTFNIL 369
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C ++ + AL EM + P+ +++ LID +G VE A IL +M G+
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
P+VV Y + +S R+++ EEM P +TY +L+ A R
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 163/371 (43%), Gaps = 36/371 (9%)
Query: 309 LEVYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+++ M + GV + +YN ++ C + E++ E+ K DV TY+
Sbjct: 65 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL----VKRGHHPDVVTYN 120
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ A + A ++ M S G PN +T+S LIN G +++A L +EM +
Sbjct: 121 TLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 180
Query: 428 GCE--PNSQCCNILLQA------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
C+ PN N L EAC+ R+ R S +S V DG
Sbjct: 181 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCG 239
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
E + I +VPN TYN L+ C R A++
Sbjct: 240 QTDEACNDDMIAG--GYVPN---------------VVTYNALVNGLCKADKMERAHAMIE 282
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M G++P+ I++++L+DA + V+ AL++L M G +P+VV + + I +S
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R +AF + ++ + + P+ VT+ L+ + G+ +Q A++++M + +
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNF---EQASALFEEMVAKNMQPDVM 399
Query: 658 YLKELIEEWCE 668
LI+ C+
Sbjct: 400 TFGALIDGLCK 410
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 16/327 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNELGAG 100
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L M GC PN ++L+
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L + T V Y+ D + KQS+T + S
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC------KQSMTAEACELMRSL 214
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D P T T++ L+ C +A ++M G PN +++ L++ +
Sbjct: 215 R---DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKA 271
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E A +++ M + G++PDV+ Y+ + ++ R+ +A L M PN+VT+
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331
Query: 622 ITLLRARSRYGSLHEV-QQCLAVYQDM 647
+++ + E Q L VY M
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRM 358
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 164/400 (41%), Gaps = 32/400 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTL 309
PN+ + +D G+C M + A + LR S V+ + F++L++ +
Sbjct: 186 PNIITYNSFLD--GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+M G + ++ +YN L+ C A + + ++ + KGV DV TYS +
Sbjct: 244 ACNDDMIAGGYVPNVVTYNALVNGLCKADKM---ERAHAMIESMVDKGVTP-DVITYSVL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F A AL++ M S G TPN +T++S+I+ + +A + ++
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKD 486
P+ NIL+ +A F++A LF Q + G DG +D
Sbjct: 360 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVG 543
+ PN TYN+L+ C R++ + EM + G
Sbjct: 420 ILDLMGNLGVPPN---------------VVTYNVLVHGLCKS-GRIEEPCEFLEEMVSSG 463
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P +++ L+ A + + ALQ++ ++ G PD V Y + +S + +QA
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
++ EEM QP+ T+ R G+L + L V
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRV 563
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 127/313 (40%), Gaps = 63/313 (20%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + S+ T N+ FNS+++ + + L+VY M ++ D ++NIL+
Sbjct: 315 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNILI 370
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AGN A ++ E + AK ++ DV T+ ++ A + A + + M +
Sbjct: 371 AGACKAGNFEQASALFEE---MVAKN-MQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV PN +T++ L++ +G +E+ EEM+ +GC P S L+ A A + D
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +L K F +
Sbjct: 487 ALQLVSKL-----------------------------------------------KSFGW 499
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P T TYNIL+ +A+ + EM G P+ ++ SGN+ G ++
Sbjct: 500 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559
Query: 570 ILKIMREDGMSPD 582
+L+++ GM PD
Sbjct: 560 LLRVVLAKGMLPD 572
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 44/388 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ T+ID G+C A +D+ + N+ +N+L+N A ++
Sbjct: 222 SPDTVTFSTLID--GLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M GV D+ +Y++L+ A C A A E+ + + ++G +V T+++I+
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL---LHGMASRGCTP-NVVTFNSII 335
Query: 371 ----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
K + +Q+AL+V ML P+ +T++ LI AG EQA LFEEM+
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQASALFEEMVA 391
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+P+ L+ +A Q + A + D GN N+ +
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDIL--------------DLMGNLGVPPNVVTYN 437
Query: 487 -------KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
K P SS P + TY L+ A C AL ++
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSS-----GCVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
++++ G P+ +++ IL+D SG E A+ +L+ M G PD + RS
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L L + + P+ T ++L
Sbjct: 553 NLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I + G C G++ ++ A++E++ ++N+ ++ F +L++ A ++ ++ M L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Query: 319 GVMADMASYNILLKACCLAG---------------NTVLAQEIYGEVKHLEAKG------ 357
GV ++ +YN+L+ C +G V YG + + +
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487
Query: 358 ---VLKL-------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V KL D TY+ +V + + A+ V E+M+ G P++ T+++
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+G + M L +L G P++ C+ +L
Sbjct: 548 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 34/315 (10%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L+A+ L+++TY+ ++KV + W+++ ++ EDM++AG+ P+ IT+S+LI+
Sbjct: 31 KWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANR 90
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-----WTLSKTQ 465
+ AM F+ M A C P++ + ++ + ++D A L+ S W K
Sbjct: 91 CNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVT 150
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK 523
G IS + S FD K +P + YNI++
Sbjct: 151 YGTMVRLFGRAGYIS-------------------AAVSIFDEMKGSGIQPGSVVYNIMI- 190
Query: 524 ACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+C R+ + EM+ G+ PN ++ + +++ SG V L I MR+D ++
Sbjct: 191 SCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQD-LA 249
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
D++ Y IK+C + + +A EM Y QPN TY ++ ++ G E Q+
Sbjct: 250 CDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQR- 308
Query: 641 LAVYQDMWKAGYKAN 655
++ + +AGY+ +
Sbjct: 309 --MFSQLVEAGYQPD 321
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 151/365 (41%), Gaps = 64/365 (17%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
QN LNIY +N ++ V + + ++ ++M G+ D +Y+ L+ +C N
Sbjct: 37 QNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLI-SCANRCNYQD 95
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + + H +A+ V D TYST++ V+ + A+ + E + +G P+ +T+
Sbjct: 96 AAMAWFDRMH-DAQCVP--DAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYG 152
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+++ AG + A+ +F+EM +G +P S NI++ A + A ++F+
Sbjct: 153 TMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEM--- 209
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K+ KP T + +M
Sbjct: 210 --------------------------------------------KQAGVKPNAVTLSTVM 225
Query: 523 KACCTDYYRVKALM------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ Y R +M + MR L+ + I + +I C +G V A Q L+ M E
Sbjct: 226 EI----YSRSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAGLVPEAEQYLREMVE 280
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P+ Y I + ++ +A +F ++ QP++++Y +LL+ +
Sbjct: 281 YGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
Query: 637 VQQCL 641
VQ+ L
Sbjct: 341 VQEIL 345
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ R + W LS+ Q+A ED R N+ + S N N+ ++ + FD+
Sbjct: 51 KVLRRGQQWELSQ-QIA--EDMINAGIRPDNITYSTLISCANRCNY-QDAAMAWFDRMHD 106
Query: 511 FK--PTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TY+ ++ Y AL ++ G P+ +++ ++ G +G +
Sbjct: 107 AQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISA 166
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ I M+ G+ P V Y I R+ R+ A +F+EMK ++PN VT T++
Sbjct: 167 AVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVME 226
Query: 627 ARSRYGSL-------HEVQQCLA----VYQDMWKAGYKAN-----DTYLKELIE 664
SR G + H ++Q LA VY + K +A + YL+E++E
Sbjct: 227 IYSRSGKVMEGLGIFHHMRQDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVE 280
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + VR FG+ + +A+ +D K P + +I G G + ++++
Sbjct: 149 VTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQE 208
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ V N +++M + + K L ++ +M++ + D+ YN ++K C AG
Sbjct: 209 MKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAG- 266
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L E ++ + G D +TY ++ ++A A ++ ++ AG P+ +
Sbjct: 267 --LVPEAEQYLREMVEYGHQPND-WTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVM 323
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++SL+ NA E+ + EM+ A C P+ + ++L ++AC D F + RS
Sbjct: 324 SYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILN-LLDACDTDVEFEILRS 381
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP A + + + +GK A+ Y++ KK P+ T++ + G G +
Sbjct: 110 VPDA-VTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAV 168
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+I+++++ + V+N +++ A + L+V++ M++ GV + + + +++
Sbjct: 169 SIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIY 228
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G + E G H+ L D+ Y+ ++K+ +A A + +M+ G
Sbjct: 229 SRSGKVM---EGLGIFHHMRQD--LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGH 283
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
PN T+ ++I+ A G+ +A +F ++++AG +P+ LLQ A +++
Sbjct: 284 QPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 196/464 (42%), Gaps = 74/464 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA-----SKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
+ F + K R + AL ++ S L P++ T+ID G+C G +
Sbjct: 341 VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID--GLCKVGRQEE 398
Query: 275 SRAIYEDLRSQNVTL-NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ E +RSQ + N +N L++ A ++ E++ M K GV ++ + N L+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A E + E ++ KG LK + TY+ +++ F + + A+++ ++ML
Sbjct: 459 DGMCKHGRINGAVEFFNE---MQGKG-LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG +P+ I + +LI+ + AG +++A + +M +AG P+ N+L+ + D
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A+ + + ME+
Sbjct: 575 AYEMLKE-----------------------MENA------------------------GI 587
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYN L+ + D+ LM +M GL P +++ LI A +GN++ A++
Sbjct: 588 KPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMK 647
Query: 570 ILKIMREDG-MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
I + M + P+ V Y I R ++ A SL ++MK ++PN T+ + +
Sbjct: 648 IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG- 706
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKA-NDTYLK-ELIEEWCEGV 670
L E ++ M + A N Y+ E++ EW V
Sbjct: 707 -----LQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAV 745
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 30/341 (8%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G V +EI G V V ++ I ++ + A V ++ G
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRT-DRAWDVLHGLMKLGGVME 304
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++L+ A A ++ L EM + +PN IL+ + + D A +F
Sbjct: 305 AASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364
Query: 458 SWTLSKTQVALGED----YDGNTDRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKR 508
++ L E Y+ D + + +++ + + + P +PN
Sbjct: 365 KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN--------- 415
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
T TYN L+ C + + L ++M G+ PN ++ L+D G + G
Sbjct: 416 ------TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING 469
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A++ M+ G+ + V YT I+ +++A LF+EM P+ + Y TL+
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLIS 529
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
S+ G L L+ M +AG+ + LI +C
Sbjct: 530 GLSQAGKLDRASFVLS---KMKEAGFSPDIVSFNVLINGFC 567
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+D+ ++ +I G ++ + E ++ + +N++++
Sbjct: 7 ARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVID 66
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + G+ D ++N LL AC AG+ A+ ++ E+ HL +
Sbjct: 67 ACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSG 126
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D++TY+T V ++A +V DM + + PN +T+S+L++ + ++
Sbjct: 127 ----RDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDE 182
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L E+M G + + C N LL V+ ++D T+ + LG + D
Sbjct: 183 ALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIA------TVCEDMENLGIEKD--- 233
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
T TYN L+ V
Sbjct: 234 --------------------------------------TVTYNSLINGYGKQGRLDMVAF 255
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ DVV +++ I
Sbjct: 256 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 315
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ A SL +EM I+PN+VTY T++ A + L E
Sbjct: 316 KNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE 357
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF +S ++ +A + A+ V E M AG+ P T++++++I+AC G+ + + F
Sbjct: 23 VFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYF 82
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+MLQ G P+ + N LL AC A + A +F + LG D
Sbjct: 83 RQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVF------DEMIHLGSGRD-------- 128
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
TYN + A C + ++ +M
Sbjct: 129 ---------------------------------IYTYNTFVDAICKCGNMELATQVVLDM 155
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ PN ++++ L+D + AL++ + M+ G+ D V Y T + + V++ +
Sbjct: 156 EANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKY 215
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ E+M++ I+ + VTY +L+ + G L V + QDM G
Sbjct: 216 DEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVA---FLVQDMRAQG 264
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+N L+ AC + + + +EM +G + ++ +DA GN+E A Q+
Sbjct: 92 PDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQV 151
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M + + P+VV Y+T + + ++ +A L E+MK IQ + V Y TLL +
Sbjct: 152 VLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVK 211
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G E+ V +DM G + + LI +
Sbjct: 212 TGKYDEIA---TVCEDMENLGIEKDTVTYNSLINGY 244
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
+P++ T+ID+ G + + +Y D + + ++ +F+S ++ A + ++ L
Sbjct: 266 APSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALS 325
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG---VLKLDVFTY- 366
+ M K+G+ ++ +YN ++ A + +L +E G + + G V + T
Sbjct: 326 LLDEMIKMGIKPNVVTYNTIIDA--FGKSKILTEEDPGNMGIVGVYGGQIVRATNPVTRG 383
Query: 367 ---STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+T V++ + + L++ + M+ GV PN +T+S+++NAC+ E A L E+
Sbjct: 384 GRSATDVRMRRSQELF-FILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQ 442
Query: 424 M 424
+
Sbjct: 443 L 443
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 203/476 (42%), Gaps = 38/476 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 457 -RSWTLSKTQVALGEDYDG-----NTDRISNMEHKDKQS------ITNTPNFVPNSHYSS 504
+ L+ ++V+ G DG D + K++ IT T
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 505 FDK---------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
D+ + P TY+ L+ C + K ++ + VGLSPN I ++
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI C G ++ A++I + M +G + D + + ++ ++ +A M
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
I PN V++ L+ YG+ E + +V+ +M K G+ L++ C+G
Sbjct: 539 ILPNTVSFDCLING---YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 167/433 (38%), Gaps = 28/433 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N K E+ + ++G+
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G A IY E LE D FT++ +V A A
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIY-EAMILEGH---TRDHFTFNVLVTSLCKAGKVAEA 527
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PNT+++ LIN N+G +A +F+EM + G P LL+
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SH 501
+ A + +S V D + M + ++ + N S
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAV----------DTV--MYNTLLTAMCKSGNLAKAVSL 635
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISWTILIDAC 558
+ +R S P + TY L+ C V A++ E G + PN + +T +D
Sbjct: 636 FGEMVQR-SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G + + + M G +PD+V I R ++++ L EM + PNL
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
TY LL Y +V +Y+ + G + L+ CE + +
Sbjct: 755 TTYNILLHG---YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 679 GEVTLCRRTNSQR 691
+ +CR R
Sbjct: 812 LKAFICRGVEVDR 824
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/353 (17%), Positives = 146/353 (41%), Gaps = 21/353 (5%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N+L+ C + + AF L + ++ ++L +D + N H+ ++S
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
+ P + Y L+ C D + EM + P +++
Sbjct: 882 LHEM----------SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ A G + A +L+ M + + P + ++TT + +C ++ + +A L M
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ +LV+Y L+ G ++ +Y++M G+ AN T K LI
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKG---DMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM R +P+ + ILI G ++ +L+I ++M G +P V +
Sbjct: 111 ALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
V+S +S +EM +I P++ T+ L+ GS + + Q M K+GY
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEKSGYA 225
Query: 654 ANDTYLKELIEEWCE 668
++ +C+
Sbjct: 226 PTIVTYNTVLHWYCK 240
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 182/439 (41%), Gaps = 61/439 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+K I+ + V Y ++ + + E + + + M G N++ LI+
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKR---WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 668 EGVIQDKNQNQGEVTLCRR 686
EG+ ++ + E LC R
Sbjct: 614 EGLAKEAQELLSE--LCSR 630
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 56/363 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+ + +M +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G C D R++ + D I H +
Sbjct: 281 G------------------CTPD--IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ M +PN V+Y +L+ G + ++ ++ M + G N LI
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS---QMIQQGCPPNPVTFNTLINF 470
Query: 666 WCE 668
C+
Sbjct: 471 LCK 473
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 59/353 (16%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+L+ E ++ L+ +M++ +D L++ +C+ + D+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS---EMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 MGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + ++ + +M G + + +I+ C+
Sbjct: 456 IFDKWDKAKELIL---EMLDRGICLDTIFFNSIIDSHCK 491
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + ++ + +M G + + +I+ C+
Sbjct: 456 IFDKWDKAKELIL---EMLDRGICLDTIFFNSIIDSHCK 491
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 203/476 (42%), Gaps = 38/476 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 167 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 222
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 283 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 457 -RSWTLSKTQVALGEDYDG-----NTDRISNMEHKDKQS------ITNTPNFVPNSHYSS 504
+ L+ ++V+ G DG D + K++ IT T
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 505 FDK---------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
D+ + P TY+ L+ C + K ++ + VGLSPN I ++
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI C G ++ A++I + M +G + D + + ++ ++ +A M
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
I PN V++ L+ YG+ E + +V+ +M K G+ L++ C+G
Sbjct: 579 ILPNTVSFDCLING---YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 346
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 525 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 641 L 641
L
Sbjct: 641 L 641
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 579 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 635
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 696 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 813 SFLLYRSIILN--------------------------------GILPDK----------- 829
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 830 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 887 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 946
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 947 VG---DIKTAFVVKEEM 960
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 167/433 (38%), Gaps = 28/433 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N K E+ + ++G+
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G A IY E LE D FT++ +V A A
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIY-EAMILEGH---TRDHFTFNVLVTSLCKAGKVAEA 567
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PNT+++ LIN N+G +A +F+EM + G P LL+
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SH 501
+ A + +S V D + M + ++ + N S
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAV----------DTV--MYNTLLTAMCKSGNLAKAVSL 675
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISWTILIDAC 558
+ +R S P + TY L+ C V A++ E G + PN + +T +D
Sbjct: 676 FGEMVQR-SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G + + + M G +PD+V I R ++++ L EM + PNL
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
TY LL Y +V +Y+ + G + L+ CE + +
Sbjct: 795 TTYNILLHG---YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 679 GEVTLCRRTNSQR 691
+ +CR R
Sbjct: 852 LKAFICRGVEVDR 864
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/353 (18%), Positives = 145/353 (41%), Gaps = 21/353 (5%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + L TY+ ++
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT----TYNILLHG 803
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N+L+ C + + AF L + ++ ++L +D + N H+ ++S
Sbjct: 864 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
+ P + Y L+ C D + EM + P +++
Sbjct: 922 LHEM----------SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ A G + A +L+ M + + P + ++TT + +C ++ + +A L M
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ +LV+Y L+ G ++ +Y++M G+ AN T K LI
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKG---DMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 900
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 993
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 994 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 1031
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1082
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM R +P+ + ILI G ++ +L+I ++M G +P V +
Sbjct: 151 ALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 208
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
V+S +S +EM +I P++ T+ L+ GS + + Q M K+GY
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEKSGYA 265
Query: 654 ANDTYLKELIEEWCE 668
++ +C+
Sbjct: 266 PTIVTYNTVLHWYCK 280
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 38/419 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A R +A SPN+ +++ G+C G ++ A+ + + + NI +N++
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLH--GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ + L E Y ++++ G ++ +Y +LL A C G A++ G V+ +
Sbjct: 297 IDGHCK-LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK---AEDAIGLVEVMV 352
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG + ++FTY++++ +F + A ++ M+ G PN ++++++I A V
Sbjct: 353 EKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGED 471
+ + L E+ML C P+ N ++ A + + D A+ LF + + V
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 472 YDG--NTDRISNMEHKDKQSITN---TPNFVP--------------NSHYSSFDKRFS-- 510
G + R E+ ++ +P+ + + Y F + S
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+I++ + C + +A ++ M G P I++ LID +GN++ AL
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+IL+++ G PDVV ++ I + RL+QA L E M + P+ VTY TLL+
Sbjct: 592 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 159/383 (41%), Gaps = 57/383 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ + +L++ DL +E+ + M + G + +YN ++ C A +++
Sbjct: 148 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLF 207
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E G DVFTYSTIV + A ++ E M+S G +PN +T+SSL++
Sbjct: 208 ---KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG +++A L + M ++GC PN N ++ + + D A+ L
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL------------ 312
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-C- 525
L E DG +P TY +L+ A C
Sbjct: 313 LEEMVDGGC-----------------------------------QPNVVTYTVLLDAFCK 337
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M G PN ++ L+D VE A Q+L M + G P+VV+
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T I ++ ++ + L E+M P++VT+ T++ A + + V ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK---TYRVDIAYELFN 454
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
+ ++G N L+ C+
Sbjct: 455 LIQESGCTPNLVTYNSLVHGLCK 477
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 20/311 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF+Y+T++ F A + AL + E M+ G P+ ++++++IN V++A +
Sbjct: 78 NVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVM 137
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M+Q GC+PN L+ D A L R T Y N +N
Sbjct: 138 DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT--------ERGYRPNAITYNN 189
Query: 482 MEHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
+ H + + + + ++ S P TY+ ++ + A L+
Sbjct: 190 IMHGLCSGRKLDSALQL-----FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M + G SPN ++++ L+ +G ++ A +L+ M G SP++V Y T I +
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R+ +A+ L EEM QPN+VTY LL A + G + + + + + M + GY N
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG---KAEDAIGLVEVMVEKGYVPNLF 361
Query: 658 YLKELIEEWCE 668
L++ +C+
Sbjct: 362 TYNSLLDMFCK 372
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 183/432 (42%), Gaps = 27/432 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSR 276
P A I + N + R L SAL+ + ++ S P+++ TI+D G +
Sbjct: 182 PNA-ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ E + S+ + N+ ++SL++ A L + + M + G ++ +YN ++
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A + E+ G + +V TY+ ++ F + A+ + E M+ G
Sbjct: 301 CKLGRIDEAYHLLEEM----VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T++SL++ VE+A L M+Q GC PN N ++ +A +
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFK 512
L LS V ++ D + D Y F+ +
Sbjct: 417 LLEQM-LSNNCVPDIVTFNTIIDAMCKTYRVDIA-------------YELFNLIQESGCT 462
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C + + + L+ EM R G SP+ I++ +ID S V+ A +
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M DG++PD V Y+ I + + + +A ++ E M P +TY TL+
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 630 RYGSLHEVQQCL 641
+ G+L + + L
Sbjct: 583 KTGNLDKALEIL 594
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 155/370 (41%), Gaps = 49/370 (13%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTYSTIVKVF 373
M + G+ A + +L+ C AG A V H E D TY+T++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDA------VLHFREMSKTCPPDSVTYNTMINGL 54
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A+++ E+M+ G PN +++++++ A VE A+ L E+M+ GC P+
Sbjct: 55 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDV 114
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGE---------DYDGNTDRISN 481
++ + Q D A R+ Q + G D DG + +
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M + ++P TYN +M C+ A L EM
Sbjct: 175 MTER------------------------GYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 540 RTVG-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G P+ +++ ++D+ SG V+ A ++++ M G SP+VV Y++ + ++ +
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK 270
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
L +A +L + M PN+VTY T++ + G + E L ++M G + N
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL---EEMVDGGCQPNVVT 327
Query: 659 LKELIEEWCE 668
L++ +C+
Sbjct: 328 YTVLLDAFCK 337
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 23/407 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ ++D CG + + E + + N++ +NSL+++ +++ ++
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M + G + ++ SYN ++ C A T + + + + L V D+ T++TI+
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKA--TKVHEGVLLLEQMLSNNCVP--DIVTFNTIID 438
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCE 430
+A ++ + +G TPN +T++SL++ + +QA +L EM + GC
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N ++ ++ + DRA++LF L L D + IS++ K
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLF----LQMLSDGLAPDDVTYSIVISSLC---KWRF 551
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
+ N V + F P TY L+ C KAL + + + G P+
Sbjct: 552 MDEANNVLELMLKN-----GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++I ID G + A ++L+ M G+ PD V Y T +K + R + A LFE
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ TY TL+ S ++ V + M G+K N
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLA--EVSKSMVDTGFKLN 711
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/552 (20%), Positives = 225/552 (40%), Gaps = 98/552 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEG---NVSKFASMLSLEMVASGIVKSIREGRID 130
Y+ + L K G++++ +VE+ +VS+G NV ++S+L G+ K+ G++D
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEA-MVSKGCSPNVVTYSSLL------HGLCKA---GKLD 272
Query: 131 CVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGEVEMFVGL 177
+L+++ G +P + DG + LL + ++D G V
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL----EEMVDGGCQPNVVTY 328
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+L+ F + ++ +V++ V K V Y ++ +FC KK ++
Sbjct: 329 TVLLDAF-CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD----MFC-------KKDEV 376
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFN 295
A + + + PN+ T+I G+C + E + S N +I FN
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVI--AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++++ + + E++ +Q+ G ++ +YN L+ C + A+ + ++ +
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL---LREM 491
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
K D+ TY+T++ +K A K+ MLS G+ P+ +T+S +I++
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++A ++ E ML+ G +P + L+ + D+A + + LSK
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSY------- 603
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-DKRFSFKPTTTTYNILMKACCTDYYRV 532
P+ V S + + KR + +
Sbjct: 604 --------------------PDVVTFSIFIDWLSKRGRLR------------------QA 625
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ M GL P+ +++ L+ + E A+ + ++MR+ G PD YTT +
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685
Query: 593 CVRSKRLKQAFS 604
V K K +
Sbjct: 686 LVDKKSYKDLLA 697
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
H+ K + P + TYN ++ A L+ EM G +PN S+ ++
Sbjct: 32 HFREMSK--TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGF 89
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ VE AL +L+ M G PDVV+YTT I + ++ +A + ++M QPN+
Sbjct: 90 CKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNV 149
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+TY TL+ R G L + + + M + GY+ N ++ C G
Sbjct: 150 ITYGTLVDGFCRVGDLDGAVE---LVRKMTERGYRPNAITYNNIMHGLCSG 197
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 178/384 (46%), Gaps = 35/384 (9%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
L + M + G ND LI
Sbjct: 530 LL---RKMEEDGNAPNDCTYNTLI 550
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 56/353 (15%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++TY LL G L ++ L +++D+ K+ +IE C+G
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 159/366 (43%), Gaps = 60/366 (16%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ + M + P++VT+ +L++ Y + V + V++++ K G AN L
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 663 IEEWCE 668
++ +C+
Sbjct: 410 VQGFCQ 415
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 153/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + K E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 168/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI---------------------NAC 408
+ VF Q A ++ ++M++ G++PN IT+++L+ N C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 409 AN--------------AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YS K + ++P TTT+N L+K + +A L++ M G P+ +++ +++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ AL +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+VTY +L+R + G ++ L +DM N L++ + EG +Q+ N+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 193/436 (44%), Gaps = 45/436 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++RA+ ++ + +N+L++ A +K +
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V ++M G D+ +YN+L C AG A + E++ L G DV TY+T+V
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL---GTALPDVVTYNTLV 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ E+M GV P +T + ++ + G +E+A+ E++ + G
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNM----EH 484
P+ N L+ A +A +AF TL V G D T + N+ +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAF------TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 485 KDKQSITNTP---NFVPN---------SHYSSFDKRFSFK-----------PTTTTYNIL 521
+D + + ++P FVP+ +++ ++ + + P+ +TYN L
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C +A+ +NE GL P+ ++ I+I A G++E A + M E+
Sbjct: 531 IKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV T + +L +A LFE + +++TY TL+++ + G +V
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG---DVDT 647
Query: 640 CLAVYQDMWKAGYKAN 655
L + DM G + +
Sbjct: 648 ALHFFDDMEVKGLQPD 663
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 154/357 (43%), Gaps = 63/357 (17%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ R + L++ N V ++L + + +L+V++++ +L + + ++N+L+
Sbjct: 163 RRRGVRPSLQAANA-----VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G + + ++ G L D TY+T++ A + M G
Sbjct: 218 HCSKGTLA---DALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P T+++L++A A G ++QA + E M G EP+ + N+L +A + D AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL KD+ ++ + P
Sbjct: 334 RL-----------------------------KDE-----------------MERLGTALP 347
Query: 514 TTTTYNILMKAC-----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ AC +D R L+ EMR G+ P ++ I++ + G +E AL
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALR---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L+ + E+G++PDV+ Y T I ++ + +AF+L +EM ++ + T T+L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+++ +P+ +P + F + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+ DG++P Y T + R +KQA
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M Y +P+L TY L + G + E
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA 332
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 182/466 (39%), Gaps = 70/466 (15%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+ K+ L AL + + +P++ T+ID G+ K+ + +++ + +
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 288 TLNIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + N+++ N +K E+ + + G + D SY ++ A N A
Sbjct: 451 KMDTFTLNTVL-YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ +E K L + TY+T++K + + A+ + + G+ P+ T++ +
Sbjct: 510 RLWDQM--IERK--LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G +E A +M++ +P+ CN L+ + D+A +LF SW
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW----- 620
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G+ D TYN L+++
Sbjct: 621 -VEKGKKVD-----------------------------------------VITYNTLIQS 638
Query: 525 CCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C D ++M GL P+ ++ +++ A +G E A +L + + G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN-LVTYITLLRARSRYGSLHEVQQCL 641
A +K+ E + Q N L TY+ L G L E +
Sbjct: 699 SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAK--- 755
Query: 642 AVYQDMWKAGYKAN-DTYLKELIEEWCEGVIQDKNQNQ---GEVTL 683
AV +M + G + TY+ + EG+I+ + + G+ TL
Sbjct: 756 AVLDEMMQKGMPVDCSTYITLM-----EGLIKRQKRQTHAAGQSTL 796
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTV---GLSPNHISWTILIDACG 559
S +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 160 SLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC 219
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY TL+ A +R G ++Q V + M G++ +
Sbjct: 280 TYNTLVSAFARLGW---IKQATKVVESMTAYGFEPD 312
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 203/476 (42%), Gaps = 38/476 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 457 -RSWTLSKTQVALGEDYDG-----NTDRISNMEHKDKQS------ITNTPNFVPNSHYSS 504
+ L+ ++V+ G DG D + K++ IT T
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 505 FDK---------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
D+ + P TY+ L+ C + K ++ + VGLSPN I ++
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI C G ++ A++I + M +G + D + + ++ ++ +A M
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
I PN V++ L+ YG+ E + +V+ +M K G+ L++ C+G
Sbjct: 539 ILPNTVSFDCLING---YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 167/433 (38%), Gaps = 28/433 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N K E+ + ++G+
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G A IY E LE D FT++ +V A A
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIY-EAMILEGH---TRDHFTFNVLVTSLCKAGKVAEA 527
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PNT+++ LIN N+G +A +F+EM + G P LL+
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SH 501
+ A + +S V D + M + ++ + N S
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAV----------DTV--MYNTLLTAMCKSGNLAKAVSL 635
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISWTILIDAC 558
+ +R S P + TY L+ C V A++ E G + PN + +T +D
Sbjct: 636 FGEMVQR-SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G + + + M G +PD+V I R ++++ L EM + PNL
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
TY LL Y +V +Y+ + G + L+ CE + +
Sbjct: 755 TTYNILLHG---YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 679 GEVTLCRRTNSQR 691
+ +CR R
Sbjct: 812 LKAFICRGVEVDR 824
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/353 (17%), Positives = 146/353 (41%), Gaps = 21/353 (5%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N+L+ C + + AF L + ++ ++L +D + N H+ ++S
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
+ P + Y L+ C D + EM + P +++
Sbjct: 882 LHEM----------SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ A G + A +L+ M + + P + ++TT + +C ++ + +A L M
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ +LV+Y L+ G ++ +Y++M G+ AN T K LI
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKG---DMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM R +P+ + ILI G ++ +L+I ++M G +P V +
Sbjct: 111 ALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
V+S +S +EM +I P++ T+ L+ GS + + Q M K+GY
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEKSGYA 225
Query: 654 ANDTYLKELIEEWCE 668
++ +C+
Sbjct: 226 PTIVTYNTVLHWYCK 240
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 205/455 (45%), Gaps = 42/455 (9%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICR-----TIIDVCGICGDYMKSRAIYED 281
FV+ G++ AL ++ +KH + + R +I+ V G + ++E
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKH----DCFKLRGVATASILSVLGNHEQLPAALELFES 63
Query: 282 LR-SQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
L+ ++ +L++Y + SL+++ + +F + +++ MQ+ G + +YN++L G
Sbjct: 64 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 123
Query: 339 NTV-LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ Q ++ E+K LE + D +TY+T++ Q AL++ ++M AG PN
Sbjct: 124 DSWDRIQSLFQEMKDLE----ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 179
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L++ G+ ++A L EM AG PN N L+ A A D A L +
Sbjct: 180 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 239
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S LSK Y + E +K T T ++ + P T
Sbjct: 240 S-LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM-----------RKTNCTPNIVT 287
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEGALQIL 571
YNIL+ Y R++ L + M+ +P+ ++W L+ + G G + +
Sbjct: 288 YNILIDI----YGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 343
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ G P V + I+ R + + +++ + +QP + T+ L+ + +R
Sbjct: 344 REMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLARE 403
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G QQC V Q+M +AG + +D LI +
Sbjct: 404 GRW---QQCEKVSQEMAEAGLQLSDACHAGLIHSY 435
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 189/451 (41%), Gaps = 59/451 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ +C + F + AL + +K +PN+ +ID+ G +++
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +N T ++ +NSL+ N L V++ M++ G M + ++NIL++ G
Sbjct: 310 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +IY K L G L+ V T++ ++ A WQ KV ++M AG+ +
Sbjct: 370 YVDYSVDIY---KGLLRTG-LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 425
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC-CNILLQACVEACQFDRAFRLFR 457
+ LI++ AN+G Q +E+ ++ +P S C + A + C + A
Sbjct: 426 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEA----- 480
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
Q+AL + YD N H P
Sbjct: 481 -------QLALNQLYD-------------------------NGH----------SPDIKV 498
Query: 518 YNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N ++ C + R L+ E+R L P+ +++ L+ G G A +++ MR
Sbjct: 499 FNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMR 558
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G +P+++ Y T + + R+ A +F +M +++P+ T+ TL+ Y SL
Sbjct: 559 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV---GSYSSLG 615
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ L+V + M + G + K L++ +
Sbjct: 616 LYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 165/341 (48%), Gaps = 23/341 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ D+ +YN L+ G LA E+ ++ + KG K +V++Y+ +V F
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEV---LRDMRNKGC-KPNVYSYTILVDGFCKLGK 433
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +M + G+ PNT+ ++ LI+A + +A+ +F EM + GC+P+ N
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFV 497
L+ E + A L R +S+ VA Y+ + + E K+ + + N F
Sbjct: 494 LISGLCEVDEIKHALWLLRD-MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF- 551
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILI 555
S D+ TYN L+K C + + ++L +M GL P+ IS ILI
Sbjct: 552 ---QGSLLDE--------ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ SG VE A++ K M G +PD+V + + I R+ R++ ++F +++ I
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
P+ VTY TL+ + G +++ CL + + + + G+ ND
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYDA--CLLLDEGI-EDGFVPND 698
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K AL V DM G PN++ + +LI++ + V +A+ L E
Sbjct: 211 LFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 270
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N ++ + C+FDR R F ++ + G
Sbjct: 271 EMFLMGCVPDAETFNDVI---LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327
Query: 472 YDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G D ++ + K I NT +H D + T+Y I+ C +
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387
Query: 529 Y----YRVKAL-------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y K L + +MR G PN S+TIL+D G ++ A +L M D
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S + E+
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVDEI 504
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR-TNSQRPQSLL 696
+ L + +DM G AN LI + +GE+ R+ N Q L
Sbjct: 505 KHALWLLRDMISEGVVANTVTYNTLINAFLR---------RGEIKEARKLVNEMVFQGSL 555
Query: 697 LEKVA 701
L+++
Sbjct: 556 LDEIT 560
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 165/395 (41%), Gaps = 32/395 (8%)
Query: 245 DASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL-RSQNVTLNIYVFNSLMNV 300
DA+K + P I T+I G ++A+ D+ S + ++ +NSL+
Sbjct: 333 DAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ LEV ++M+ G ++ SY IL+ C G E Y + + A G
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI---DEAYNLLNEMSADG- 448
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
LK + ++ ++ F A+++ +M G P+ T++SLI+ ++ A+
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED--YDGNT 476
L +M+ G N+ N L+ A + + A +L Q +L ++ Y+
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF---QGSLLDEITYNSLI 565
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA 534
+ DK S F+K R P++ + NIL+ C +A
Sbjct: 566 KGLCRAGEVDKAR-------------SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ EM G +P+ +++ LI+ +G +E L + + ++ +G+ PD V Y T +
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + A L +E PN T+ LL++
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 513
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G + D +YN L+K C AG
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGE 573
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 574 VDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 633
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 634 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDG 693
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ V DR
Sbjct: 694 FVPNDRTWSILLQSLVPQETLDR 716
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 180/404 (44%), Gaps = 57/404 (14%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN---------- 502
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ L +A LF EM H + + V Y LL + G+LH+
Sbjct: 503 ---NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 543
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 175/438 (39%), Gaps = 62/438 (14%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+RA ++ PN C I+ R ++E L + NV + FN
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNV----FTFNI 193
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ +L ++ M+++G + D+ ++N L+ G +++ E++
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR--- 250
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ K DV TY+ ++ F + A M GV N +T+S+ ++A GLV
Sbjct: 251 -RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+AM LF +M G N L+ +A + D A L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL------------------ 351
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D+ P V TY +L+ C + +A
Sbjct: 352 -----------DEMVRQGVPLNV------------------VTYTVLVDGLCKERKVAEA 382
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
++ M G+ N + +T LI + N E AL +L M+ G+ D+ Y I+
Sbjct: 383 EDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQG 442
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+L +A SL +M ++PN + Y T++ A + G +V + +A+ Q + +G+
Sbjct: 443 LCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG---KVPEAIAMLQKILDSGF 499
Query: 653 KANDTYLKELIEEWCEGV 670
+ N+ L E ++ + E V
Sbjct: 500 QPNNGCLNEAVQLFNEMV 517
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K+ + A++ + + + N + +ID G + + ++
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ + N
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN I
Sbjct: 414 SEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
++++++AC +G V +A+ + +++L +G +PN+ C N +Q
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQ 511
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+NI++ C + ++L + M+ +G P+ +++ LID G G ++ Q+
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ MR G DVV Y I + R++ A+ F MK + N+VT+ T + A +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-------VIQDKNQNQG 679
G V++ + ++ M G N+ LI+ C+ V+ D+ QG
Sbjct: 306 EGL---VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN ++ I+ID G + A + M+E G PDVV + + I + L +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L EEM+ + ++VTY L+ ++G + + + M + G AN ++
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 665 EWC-EGVIQD 673
+C EG++++
Sbjct: 302 AFCKEGLVRE 311
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 51/445 (11%)
Query: 274 KSRAIYED---LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
K R YE LRS+ T++I N+L+ V ++ +Y+ + + GV ++ + N
Sbjct: 170 KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLN 229
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ A C G EV+ KGV D+ TY+T++ ++ + A ++
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQE---KGVYP-DIVTYNTLISAYSSQGLMEEAFELMHA 285
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC-NILLQACV--E 445
M S G +P T++++IN G E+A +F EML++G P+S ++L++AC +
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHKDKQSITNTPNFVP-N 499
A + + F RS + V GN D+ + K++ +P N
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-----GLIPDN 400
Query: 500 SHYSSFDKRFSFKPTTT-------------------TYNILMKACCTDYYRVKA--LMNE 538
Y+ + + K + TYN ++ C +A L NE
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL P+ + TILID GN++ A+++ K M+E + DVV Y T + +
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ A ++ +M +I P +++ L+ A G L E V+ +M K
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA---FRVWDEMISKSIKPTVMI 577
Query: 659 LKELIEEWCEGVIQDKNQNQGEVTL 683
+I+ +C + N + GE+ L
Sbjct: 578 CNSMIKGYC----RSGNASDGEIFL 598
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 186/414 (44%), Gaps = 29/414 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP+ R+++ GD +++ I+ D+RS++V ++ F+S+M++ + +L L
Sbjct: 327 SPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++++ G++ D Y IL++ C G A + E+ +G +DV TY+TI+
Sbjct: 387 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ---QGC-AMDVVTYNTIL 442
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A K+ +M G+ P++ T + LI+ G ++ AM LF++M + +
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N LL + D A ++ +SK + + + + + H +
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADM-VSKEILPTPISFSILVNALCSKGHLSEA-- 559
Query: 491 TNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ +D+ S KPT N ++K C + + + +M + G P
Sbjct: 560 -----------FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVP 608
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ IS+ LI N+ A ++K M E G+ PDV Y + + R ++K+A +
Sbjct: 609 DCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEA 668
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +M + P+ TY +L+ + S + + + +M + G+ +D +
Sbjct: 669 VLRKMIERGVNPDRSTYTSLING---FVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 181/445 (40%), Gaps = 75/445 (16%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
SP +Y T+I+ G+C G Y +++ E
Sbjct: 292 SPGVYTYNTVIN--GLCKHGKYERAK---------------------------------E 316
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M + G+ D +Y LL C G+ V + I+ +++ ++ V+ D+ +S+++
Sbjct: 317 VFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMR---SRDVVP-DLVCFSSMM 372
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+F + AL + AG+ P+ + ++ LI G++ +AM+L EMLQ GC
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGEDYDGNTDRIS 480
+ N +L + A +LF S+TL T + G GN
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL--TILIDGHCKLGNLQNAM 490
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKAC 525
+ K K+ N+ F K PT +++IL+ A
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C+ + +A + +EM + + P + +I SGN L+ M +G PD
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYITLLRARSRYGSLHEVQQCL 641
++Y T I V+ + + +AF L ++M+ Q + P++ TY ++L R + E +
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAE--- 667
Query: 642 AVYQDMWKAGYKANDTYLKELIEEW 666
AV + M + G + + LI +
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGF 692
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 172/410 (41%), Gaps = 62/410 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + F + + F + +L AL +++ K+ P+ I +I G C M S
Sbjct: 361 VVPDL-VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCRKGMIS 417
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
A + ++ Q +++ +N++++ L +++ M + G+ D + IL+
Sbjct: 418 EAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILI 477
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A E++ ++K +KLDV TY+T++ F A ++ DM+S
Sbjct: 478 DGHCKLGNLQNAMELFKKMKEKR----IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P I++S L+NA + G + +A +++EM+ +P CN +++ C
Sbjct: 534 KEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG---YC---- 586
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
RS S ++ L ++ I+ F
Sbjct: 587 -----RSGNASDGEIFL------------------EKMISE-----------------GF 606
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEM--RTVGLSPNHISWTILIDACGGSGNVEGA 567
P +YN L+ + KA L+ +M + GL P+ ++ ++ ++ A
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEA 666
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+L+ M E G++PD YT+ I V L +AF +EM P+
Sbjct: 667 EAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 231 FGKKRDLVSA--LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQN 286
FGK D+ +A + A SK+ L +P I +I+ V +C G ++ +++++ S++
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTP---ISFSIL-VNALCSKGHLSEAFRVWDEMISKS 570
Query: 287 VTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + NS++ + NA D + LE M G + D SYN L+ N
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLE---KMISEGFVPDCISYNTLIYGFVKEENMS 627
Query: 342 LAQEIYGEVKHLEAK-GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +G VK +E K G L DVFTY++I+ F + A V M+ GV P+ T
Sbjct: 628 KA---FGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++SLIN + + +A +EMLQ G P+ +
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 179/456 (39%), Gaps = 86/456 (18%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I +I + G G K I+E++
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEM 169
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC------ 334
+ V+ +++ + +L+N + K+ +LE+ + M+K V + +YN ++ +C
Sbjct: 170 GAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLD 229
Query: 335 ---------------------------CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
C N L E + + GV+ D+ TY+
Sbjct: 230 WEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVP-DITTYT 288
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+V F ++ ++M S G P +++ L+ A A G +E A +F M +A
Sbjct: 289 YLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN++ +ILL + ++D LF +S T+
Sbjct: 349 GCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTE---------------------- 386
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLS 545
P TYN L+ Y V L ++M +
Sbjct: 387 -------------------------PDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVE 421
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ LI ACG G + A +IL M E GM P AYT I+ ++ ++A
Sbjct: 422 PNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVT 481
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M +P + TY TL+ +R G E + L
Sbjct: 482 LNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAIL 517
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K+MQ+ + + Y I++ L G L ++ + + A GV +
Sbjct: 122 DWQRSLRLFKHMQRQIWCKPNEHIYTIMI---SLLGREGLLEKCSDIFEEMGAHGVSR-S 177
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++++L++ E M V+P+ +T++++IN+CA GL E + LF
Sbjct: 178 VFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLF 237
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +FR+
Sbjct: 238 AEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRT----------------------- 274
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
N VP+ TT TY + +V L+ EM +
Sbjct: 275 ---------MNEGGVVPDI-------------TTYTYLVDTFGKLNRLDKVSELLKEMAS 312
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P S+ +L++A GN+E A + ++M+E G P+ Y+ + + + R +
Sbjct: 313 TGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDE 372
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
LF EMK +P+ TY TL+ G EV + ++ DM + + N +
Sbjct: 373 VRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEV---VTLFHDMAEENVEPNMETYEG 429
Query: 662 LIEEWCEGVIQD 673
LI +G + D
Sbjct: 430 LIFACGKGGLHD 441
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 55/304 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+E+
Sbjct: 104 KLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCS 163
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+FEEM G + L+ + +++ + L
Sbjct: 164 DIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLEL----------------------- 200
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+E K+ ++ P+ TYN ++ +C D+ + L
Sbjct: 201 ---LERMKKERVS---------------------PSILTYNTVINSCARGGLDWEGLLGL 236
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M E G+ PD+ YT + +
Sbjct: 237 FAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGK 296
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
RL + L +EM P + +Y LL A +R G+ ++ V++ M +AG N
Sbjct: 297 LNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGN---IEDATGVFRLMQEAGCVPN 353
Query: 656 -DTY 658
+TY
Sbjct: 354 AETY 357
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF 307
+ P+ T+IDV G G + + ++ D+ +NV N+ + L+ HD
Sbjct: 385 TEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDD-- 442
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAG---------NTVLAQ------EIYGEVKH 352
++ +M + G++ +Y +++A A NT+ E Y + +
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502
Query: 353 LEAKG---------VLKLDVF-------TYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ A+G +LK+ F +++ +++ F ++ A+K +M + + P
Sbjct: 503 MFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVP 562
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ T ++++ AGLV++++ F+E+ +G PN C ++L ++ +++ A+ L
Sbjct: 563 DERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELL 622
Query: 457 RSWTL---SKTQVALGEDYDGNTDRISNME 483
S +G+ G+ D SN +
Sbjct: 623 DEMLTNRASNIHQVIGQMIKGDFDDDSNWQ 652
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 13/239 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + +G+ AL + + S P + T+I + G Y ++ AI +
Sbjct: 462 YTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V FN ++ +F ++ Y M+K ++ D + +L C+AG
Sbjct: 522 DFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAG--- 578
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L E + + ++A G+L +V Y ++ V+A + W A ++ ++ML+ +
Sbjct: 579 LVDESVEQFQEIKASGILP-NVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVI 637
Query: 402 SSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+I +N +VE ++F+++ GC + N LL+A Q +RA R+
Sbjct: 638 GQMIKGDFDDDSNWQMVE---YVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVL 693
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 196/467 (41%), Gaps = 80/467 (17%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGEDY---------------DG--NTDRISNMEHKDKQSITNTP 494
+ Q+ LG DG T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTY 658
+ PNLVTY TL+R Y +L V Q + ++ M G+K N D+Y
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKGWKPNEDSY 530
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 173/423 (40%), Gaps = 37/423 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E L S+ N+ + +L+N A D+ + ++ G+ D +Y + C A
Sbjct: 61 ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + +G L+ FTY+ ++ A + A+ V M + P+
Sbjct: 121 GMLTHACRVF---VLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T ++++++ AG E+A L EE + G EPN N L+ A + + A ++F
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 458 SWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSF 505
++ T++ G G +R S M + T + +
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 506 DKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ +F+ P T+++L+ A C + + + G+ N + +T
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G ++ A ++++ M +G PD +Y++ I R K+L QA + E+M
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 613 QIQPNLVTYITLLRARSR-YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGV 670
IQ + VTY ++ R GS + ++ M G + + +C EG
Sbjct: 417 GIQASPVTYTIIIDELVREVGS----EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 671 IQD 673
++D
Sbjct: 473 MED 475
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
PN +LL+ V+ D + + W ++ + +YD
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDI---WKIADMKDLQESNYD 564
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + ++ + +M G + + +I+ C+
Sbjct: 456 IFDKWDKAKELIL---EMLDRGICLDTIFFNSIIDSHCK 491
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMA 325
GD +R+++ ++ T +I +NSL ++ H L + +++ M+ D+
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSL--IDGHGKLGLLDECICIFEQMKDADCDPDVI 326
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A E E+K A G LK +V TYST + F Q A+K
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMK---ANG-LKPNVVTYSTFIDAFCKEGMLQEAIKF 382
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM +TPN T++SLI+A AG + +A+ L EE+LQAG + N LL E
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 442
Query: 446 ACQFDRAFRLFRSWTLS------KTQVAL------GEDYDGNTDRISNMEHKDKQ----- 488
+ A +FR+ + +T AL ++ + D + M+ K +
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 502
Query: 489 ------SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
+ N K Y LM A +A L+ EM
Sbjct: 503 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 562
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+GL +++ LID SG V+ A+ M E G+ P+V YT + ++ +
Sbjct: 563 DLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFE 622
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A LF+EM + P+ + Y L+ ++G+L E
Sbjct: 623 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 658
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 189/437 (43%), Gaps = 40/437 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
FC F R + A K + PN+ T ID C + M AI + D
Sbjct: 335 FCKFER-------MPKAFEFLHEMKANGLKPNVVTYSTFID--AFCKEGMLQEAIKFFVD 385
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R +T N + + SL++ N A +L L++ + + + G+ ++ +Y LL C G
Sbjct: 386 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ + + GV + TY+ +V F AK + A + ++M + P+ +
Sbjct: 446 MKEAEEVF---RAMLNAGVAP-NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 501
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-- 457
+ +++ N +E+A L E+ ++G N+ L+ A ++ Q A L
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Query: 458 -SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
L T+V DG + + H+ +P
Sbjct: 562 LDLGLIATEVTYCALIDG---------------LCKSGLVQEAMHHFGRMSEIGLQPNVA 606
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y L+ C + + K L +EM G+ P+ I++T LID GN++ AL + M
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E GM D+ AYT I S ++++A +L +EM + P+ V Y+ L++ +Y +L
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK---KYYAL 723
Query: 635 HEVQQCLAVYQDMWKAG 651
+V + L + +M K G
Sbjct: 724 GKVDEALELQNEMAKRG 740
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 53/320 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M+K V S N LL G L+++ + K + A G+ K VFTY+ +
Sbjct: 206 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF---KDMGAAGI-KRSVFTYNIM 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +MA + M AG TP+ +T++SLI+ GL+++ + +FE+M A C
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ C+F+R + F H+ K +
Sbjct: 322 DPDVITYNALINC---FCKFERMPKAFE------------------------FLHEMKAN 354
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
KP TY+ + A C + +A+ +MR V L+PN
Sbjct: 355 --------------------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T LIDA +GN+ AL++++ + + G+ +VV YT + R+K+A +F
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M + + PN TY L+
Sbjct: 455 AMLNAGVAPNQETYTALVHG 474
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
K + TYNI++ C D ++L +M+ G +P+ +++ LID G G ++ +
Sbjct: 252 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECIC 311
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I + M++ PDV+ Y I + +R+ +AF EMK ++PN+VTY T + A
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ G L Q+ + + DM + N+ LI+ C+
Sbjct: 372 KEGML---QEAIKFFVDMRRVALTPNEFTYTSLIDANCKA 408
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 214/558 (38%), Gaps = 128/558 (22%)
Query: 114 EMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKL 157
+M A+GI +S+ +EG ++ + ++ E G P L DG G
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 304
Query: 158 LKNEC----QRLLDSG---EVEMFVGLMEVLEEF-RLP-VKELDEEFRIVQLCVNKPDVN 208
L +EC +++ D+ +V + L+ +F R+P E E + L KP+V
Sbjct: 305 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL---KPNV- 360
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
+ + F+ F K+ L A++ + ++ +PN + ++ID
Sbjct: 361 -------------VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----------------------------- 299
G+ ++ + E++ + LN+ + +L++
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 300 --------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ A ++++ ++ K M++ + D+ Y +L C A+ + GE+K
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + + Y+T++ + + AL + E+ML G+ +T+ +LI+ +
Sbjct: 528 ----ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
GLV++AMH F M + G +PN L+ + F+ A +LF L K +
Sbjct: 584 GLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE-MLDKGMMPDKIA 642
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
Y D NM+H + Q N
Sbjct: 643 YTALID--GNMKHGNLQEALN--------------------------------------- 661
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L + M +G+ + ++T LI SG V+ A +L M G+ PD V Y IK
Sbjct: 662 ---LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718
Query: 592 VCVRSKRLKQAFSLFEEM 609
++ +A L EM
Sbjct: 719 KYYALGKVDEALELQNEM 736
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 53/281 (18%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
++ K +DM +AG+ + T++ +I+ G +E A LF +M +AG P+ N L+
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ D +F D + D
Sbjct: 298 DGHGKLGLLDECICIFEQMK------------DADCD----------------------- 322
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
P TYN L+ C KA ++EM+ GL PN ++++ IDA
Sbjct: 323 ------------PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 370
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A++ MR ++P+ YT+ I ++ L +A L EE+ I+ N+
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV 430
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTY 658
VTY LL G + E ++ V++ M AG N +TY
Sbjct: 431 VTYTALLDGLCEEGRMKEAEE---VFRAMLNAGVAPNQETY 468
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 27/281 (9%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L +A G++E+A F +M + P + CN LL + + D + +
Sbjct: 182 VPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F+ + + ++ Y+ D + + D + + S ++ K F P
Sbjct: 242 FFKDMGAAGIKRSVFT-YNIMIDYLC--KEGDLE--------MARSLFTQM-KEAGFTPD 289
Query: 515 TTTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGA 567
TYN L+ D + L++E M+ P+ I++ LI+ + A
Sbjct: 290 IVTYNSLI-----DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ L M+ +G+ P+VV Y+T I + L++A F +M+ + PN TY +L+ A
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G+L E L + +++ +AG K N L++ CE
Sbjct: 405 NCKAGNLAEA---LKLVEEILQAGIKLNVVTYTALLDGLCE 442
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +M G+ + ++ I+ID G++E A + M+E G +PD+V Y + I
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L + +FE+MK P+++TY L+ ++ + + +M G
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF---ERMPKAFEFLHEMKANGL 356
Query: 653 KANDTYLKELIEEWC-EGVIQD 673
K N I+ +C EG++Q+
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQE 378
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 209/483 (43%), Gaps = 52/483 (10%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT 308
KH P+ Y +I I G ++ + D+ + + ++ +N L L
Sbjct: 309 KHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAK-GFRLLGLI 367
Query: 309 LEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ +QK+ G ++ +Y +L+ C GN A ++Y K + + G +L + +
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY---KEMISHG-FQLSIIS 423
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++ ++ +A K+ +M + G+ P+ IT+S+LI+ G V+QA+ L+E+M
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
PNS +L E + +A F + LS + DG R +
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543
Query: 483 E----HKDKQSITNTPNFVP-NSHYSSF--DKRFS-------------FKPTTTTYNILM 522
E +K +P V NS F +++ S +P TY LM
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + + L++EM+ + P HI++T++I ++ + Q+L+ M G++
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD V+Y T I+ +++ +++AF L+++M + ++P VTY L+ YG L +
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723
Query: 641 LA------------VYQDMWKAGYKAND-----TYLKELIEEWCEGVIQDKNQNQGEVTL 683
L Y + KA D Y ++++E+ E I+D + G L
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR--L 781
Query: 684 CRR 686
C+R
Sbjct: 782 CKR 784
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 208/461 (45%), Gaps = 44/461 (9%)
Query: 226 NFVREFGKKRDLVSALR-------AYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSR 276
NF+ L+ LR Y+ K + + Y ++D G+C + +
Sbjct: 209 NFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVD--GLCRQSRFQDAV 266
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASYNILLK 332
++D + ++ FN++M+ L F ++V K+ M K G++ D SYNIL+
Sbjct: 267 LFFQDTEGKEFQPSVVSFNTIMSRYC-KLGF-VDVAKSFFCMMLKHGLLPDAYSYNILIH 324
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+AG+ A ++ + +E G L+ D+ TY+ + K F A + + ML
Sbjct: 325 GLCIAGSMGEALDLKND---MENHG-LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIK 380
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN +T++ LI G VE+A+ L++EM+ G + + +LL + ++ Q D A
Sbjct: 381 GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVA 440
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFS 510
F+LF + L D + I + + + +Q+I N
Sbjct: 441 FKLFCEMEAN----GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN----------R 486
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P + + ++ C +A M + + T LS + I + I+ID GN A+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ K + E G+SP +V + + + +++L QA L + +K + ++PN VTY TL+
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTY---LKELIEEW 666
G++ + + L+ + KA + TY +K L ++W
Sbjct: 607 CEEGNMQSLLELLSEMKA--KAIGPTHITYTVVIKGLCKQW 645
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 188/443 (42%), Gaps = 67/443 (15%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
R D++ + + K+ ++ A+ Y+ + PN I I+ G+C G ++
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL--MGLCEKGKISQA 510
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
R ++ L + N++L+I ++N +++ + + + +++YK + + G+ + ++N L+
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570
Query: 334 CCLAGNTVLAQEIYGEVK--HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C+ A+ + +K LE V TY+T++ V+ + Q L++ +M +
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAV------TYTTLMNVYCEEGNMQSLLELLSEMKA 624
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P IT++ +I ++++ L E+M G P+ N ++QA +A +
Sbjct: 625 KAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRK 684
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
AF+L+ DK + N
Sbjct: 685 AFQLY-----------------------------DKMLLHN------------------L 697
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT+ TYNIL+ C D L+ ++ ++ N ++T +I A G+V+ A+
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E G + Y+ I + + +A F M + P+ + LL A
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817
Query: 630 RYGSLHEVQQCLAVYQDMWKAGY 652
+ G L+ + LA +M K+G+
Sbjct: 818 QCGHLNSEFELLA---EMIKSGW 837
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 171/396 (43%), Gaps = 32/396 (8%)
Query: 102 GNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELF---DGSGFK-- 156
GNV + A L EM++ G SI + ++G L K ++ VA +LF + +G +
Sbjct: 400 GNVEE-ALKLYKEMISHGFQLSIISSTV--LLGSLCKSRQVDVA-FKLFCEMEANGLRPD 455
Query: 157 ------LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLA 210
L+ C++ GEV+ + L E + R+ L ++ LC K ++ A
Sbjct: 456 LITYSTLIHGLCKQ----GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC-EKGKISQA 510
Query: 211 IRYACIVPRAD-----ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
Y + ++ IL+ + + K+ + A++ Y + SP + +++
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
I ++R + + ++ + N + +LMNV + ++ LE+ M+ +
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+Y +++K C QE ++ ++A G L D +Y+TI++ F A+ + A
Sbjct: 631 HITYTVVIKGLCKQWKL---QESCQLLEDMDAVG-LTPDQVSYNTIIQAFCKARDMRKAF 686
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML + P ++T++ LIN G ++ A +L + N +++A
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
D+A FR +V++ DY R+
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSI-RDYSAVIGRL 781
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 195/467 (41%), Gaps = 80/467 (17%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGE-----------------DYDGNTDRISNMEHKDKQSITNTP 494
+ Q+ LG D T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTY 658
+ PNLVTY TL+R Y +L V Q + ++ M G+K N D+Y
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKGWKPNEDSY 530
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 173/423 (40%), Gaps = 37/423 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E L S+ N+ + +L+N A D+ + ++ G+ D +Y + C A
Sbjct: 61 ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + +G L+ FTY+ ++ A + A+ V M + P+
Sbjct: 121 GMLTHACRVF---VLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T ++++++ AG E+A L EE + G EPN N L+ A + + A ++F
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 458 SWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSF 505
++ T++ G G +R S M + T + +
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 506 DKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ +F+ P T+++L+ A C + + + G+ N + +T
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G ++ A ++++ M +G PD +Y++ I R K+L QA + E+M
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 613 QIQPNLVTYITLLRARSR-YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGV 670
IQ + VTY ++ R GS + ++ M G + + +C EG
Sbjct: 417 GIQASPVTYTIIIDELVREVGS----EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 671 IQD 673
++D
Sbjct: 473 MED 475
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 159/369 (43%), Gaps = 12/369 (3%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN +LL+ V+ D + +++ + QV L + + +++ + +
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCL 584
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
H+ + + P+ Y ++ CC A L++ M G P+
Sbjct: 585 CRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHL 644
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ I+I + GN A ++ + + D + + I ++ + + SL
Sbjct: 645 ESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSV 704
Query: 609 MKHYQIQPN 617
MK + QP+
Sbjct: 705 MKEHGYQPS 713
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 180/409 (44%), Gaps = 33/409 (8%)
Query: 263 IDVCGICG-DYMKSRAIYEDLRSQNVTL-NIYVFNSLMNVNAHDLKF--TLEVYKNMQKL 318
I V G C ++K A DL +QN L +++ +N L+ D K + M+ L
Sbjct: 287 ILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENL 346
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
++ D+ +YN L+ C +++ E+ + +E KGV K + TY+ +VK +
Sbjct: 347 KLLPDVVTYNTLINGCFDCSSSLKGFEL---IDKMEGKGV-KPNAVTYNVVVKWYVKEGK 402
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A M +G +P+ +T+++LIN AG + +A + +EM + G + NS N
Sbjct: 403 MDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462
Query: 439 LLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNM--EHKDKQ 488
+L + D A++L S + +S + +G DG + + E K+K+
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522
Query: 489 ---SITNTPNFVPNSHYS-----SFDK-----RFSFKPTTTTYNILMKACCTDYYRVKAL 535
SI + +S S DK P TTYN ++ C + KA
Sbjct: 523 IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAF 582
Query: 536 M--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
N+M P+ + IL+ G ++ AL++ G + D V Y T I
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ R ++AF L EM+ ++ P+ TY +L A + G + E ++ ++
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMS 691
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 152/366 (41%), Gaps = 58/366 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMAD 323
C + I+ ++ ++ N+ N+L+N + + + ++ ++ KLGV +
Sbjct: 152 CNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVN 211
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++NIL+ CC+ A + G++K D +Y+TI+ V A
Sbjct: 212 TNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFP----DNVSYNTILDVLCKKGKLNEAR 267
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ DM + G+ PN T++ L++ G +++A + + M Q P+ N+L+
Sbjct: 268 DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + D AFRL D + N++
Sbjct: 328 CKDGKIDEAFRL--------------------KDEMENLK-------------------- 347
Query: 504 SFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L+ C C+ + L+++M G+ PN +++ +++
Sbjct: 348 -------LLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A L+ M E G SPD V + T I ++ RL +AF + +EM ++ N VT
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460
Query: 622 ITLLRA 627
T+L
Sbjct: 461 NTILHT 466
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 194/480 (40%), Gaps = 56/480 (11%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
D ++ AC P N ++ K +L++ +A ++ S P++Y+
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYL------- 195
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
S+AI+ D+ V +N FN L+ + L + + M+ D
Sbjct: 196 ---------SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPD 246
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN +L C G A+++ ++K+ G+L + T++ +V + W + A
Sbjct: 247 NVSYNTILDVLCKKGKLNEARDLLLDMKN---NGLLP-NRNTFNILVSGYCKLGWLKEAA 302
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V + M V P+ T++ LI G +++A L +EM P+ N L+ C
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362
Query: 444 VEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
+ + F L + ++ V +G D N K ++S
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES------ 416
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
F P T+N L+ C +A +M+EM GL N ++
Sbjct: 417 --------------GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++ G ++ A ++L + G D V+Y T I + + +A L++EMK +
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
I P+++TY T++ G + Q + ++ ++G ++T +I +C EG ++
Sbjct: 523 IIPSIITYNTMIGGLCHSG---KTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVE 579
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 165/429 (38%), Gaps = 84/429 (19%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+V+E GK + + LR + S SP+ T+I+ G ++ + +++ +
Sbjct: 397 YVKE-GKMDNAGNELRKMEESG---FSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ +N N++++ + K + YK + K G D SY L+ G +V A
Sbjct: 453 LKMNSVTLNTILHTLCGERKLD-DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E+K E + + TY+T++ + ++ ++L +G+ P+ T+++
Sbjct: 512 MKLWDEMKEKE----IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I G VE+A +M++ +P+ CNILL+ D+A +LF +W
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW---- 623
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
++ G+ D TYN ++
Sbjct: 624 --ISKGKAIDA-----------------------------------------VTYNTIIS 640
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--- 578
C + + L+ EM L P+ ++ ++ A +G ++ A + + + E G
Sbjct: 641 GLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQ 700
Query: 579 --------------------MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
P+ V ++ I + K A + +E I +
Sbjct: 701 DQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK 760
Query: 619 VTYITLLRA 627
TYI+L+
Sbjct: 761 STYISLMEG 769
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V T+I V R A +F MK ++PNL+T TL+ A RY S V A+
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199
Query: 644 YQDMWKAGYKANDTYLKELIEEWC 667
+ D+ K G K N LI C
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCC 223
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 135/322 (41%), Gaps = 39/322 (12%)
Query: 124 IREGRIDCVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGE 170
++EG++D L+K+ E G +P L +G F+++ ++ L
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
V + L + E ++LD+ ++++ + + Y ++
Sbjct: 458 VTLNTILHTLCGE-----RKLDDAYKLLSSASKRGYFVDEVSYGTLI-----------MG 501
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVT 288
+ K V A++ +D K+ P++ T+I G+C ++I +L +
Sbjct: 502 YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG--GLCHSGKTDQSIDKLNELLESGLV 559
Query: 289 LNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+ +N+++ ++ + + M K D+ + NILL+ C G A ++
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ +KG +D TY+TI+ ++ A + +M + P+ T++++++
Sbjct: 620 FNT---WISKGK-AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675
Query: 407 ACANAGLVEQAMHLFEEMLQAG 428
A A+AG +++A +++ G
Sbjct: 676 ALADAGRMKEAEEFMSRIVEQG 697
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 182/439 (41%), Gaps = 61/439 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+K I+ + V Y ++ + + E + + + M G N++ LI+
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKR---WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 668 EGVIQDKNQNQGEVTLCRR 686
EG+ ++ + E LC R
Sbjct: 614 EGLAKEAQELLSE--LCSR 630
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 143/363 (39%), Gaps = 56/363 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE-------- 272
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+L Q C D R++ + D I H +
Sbjct: 273 ----------VLAQMSEHGCTPD--IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ M +PN V+Y +L+ G + ++ ++ M + G N LI
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS---QMIQQGCPPNPVTFNTLINF 470
Query: 666 WCE 668
C+
Sbjct: 471 LCK 473
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 59/353 (16%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
T+L+ E ++ L+ +M++ +D L++ +C+ + D+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS---EMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 190/471 (40%), Gaps = 76/471 (16%)
Query: 115 MVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMF 174
MVA G R G D V + +++ ELG+AP D F+ L + + F
Sbjct: 250 MVACG-----RCGAGDTAVELFEEMKELGLAP----DNITFRGLVSATTAAGKWKAAQSF 300
Query: 175 VGLMEVLEEFRLPVKELDE-EFRIVQLCVNKPDVNL---AIRYACIVPRAD---ILFCNF 227
+ LM+ F + E E ++ + ++ + L I C PR + L C
Sbjct: 301 INLMQA-GGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGC-EPRLENYNALLC-- 356
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ K + A+R ++ +P+ +++ C G K+ A+ E ++ N
Sbjct: 357 --AYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNF 414
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
T N+ + L+ + + T E++ +M G + ++N LL A +
Sbjct: 415 TPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSA--YEKGRQWKRV 472
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+Y ++ E GV KLDV +ST + A A WQ+A K M +G PN +T+SSLI
Sbjct: 473 LY-TIEKQEELGV-KLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLI 530
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A + GL +A +F+ ML G P+S+ C LL+A + Q D+ F S
Sbjct: 531 KAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDS------- 583
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+P R+ KP Y + AC
Sbjct: 584 ------------------------------MMP---------RYGIKPDKYAYAAIFWAC 604
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C ++ R M M G +P+ + +T LI G V+ A++ILK M
Sbjct: 605 WTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKM 655
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 196/459 (42%), Gaps = 91/459 (19%)
Query: 219 RADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D+ N V + G+ R+ +A R + A + PN ++C T+I V G ++
Sbjct: 170 RVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALK 229
Query: 278 IYEDLRSQNVTLNIYVFNSLM----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ + Q + IY FN+LM A D +E+++ M++LG+ D ++ L+ A
Sbjct: 230 LFRWMEKQGIERPIYTFNALMVACGRCGAGDT--AVELFEEMKELGLAPDNITFRGLVSA 287
Query: 334 CCLAGNTVLAQEIY------------GEVKHL-----------EAKGVLKLDVF------ 364
AG AQ GE + E+ G+L+ +
Sbjct: 288 TTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPR 347
Query: 365 --TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
Y+ ++ + W+ A++ + G TP+ ITWSSL+ ACANAG E+A+ + E
Sbjct: 348 LENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVME 407
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M + PN V C +A++ KT GN ++ +
Sbjct: 408 KMKENNFTPN----------VVSWCYLLKAYQ--------KT---------GNWEKTEEI 440
Query: 483 EHKDKQSITNT---PNFVP-NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
H S+ N+ PN V NS S+++K +K RV + +
Sbjct: 441 FH----SMLNSGCPPNEVAWNSLLSAYEKGRQWK------------------RVLYTIEK 478
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+G+ + ++W+ I A +G + A + ++ M++ G P++V Y++ IK
Sbjct: 479 QEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGL 538
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+A S+F+ M I+P+ LLRA ++ L +V
Sbjct: 539 WNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKV 577
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 130/314 (41%), Gaps = 19/314 (6%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L++DV + + +V + W A +V SA V PN ++LI + +A+
Sbjct: 169 LRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEAL 228
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF M + G E N L+ AC D A LF ++ L D
Sbjct: 229 KLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEE----MKELGLAPD------- 277
Query: 479 ISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
N+ + S T + + + + F + + AC + L
Sbjct: 278 --NITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGL 335
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ M G P ++ L+ A + N E A++ + ++E G +PD + +++ + C
Sbjct: 336 LQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACAN 395
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + ++A ++ E+MK PN+V++ LL+A + G+ + ++ ++ M +G N
Sbjct: 396 AGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEE---IFHSMLNSGCPPN 452
Query: 656 DTYLKELIEEWCEG 669
+ L+ + +G
Sbjct: 453 EVAWNSLLSAYEKG 466
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 166/387 (42%), Gaps = 56/387 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVY 312
+Y II G G ++ I+ ++ + N+ +N++++ + K LE++
Sbjct: 112 VYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G+ D ++N LL C G A+ + E+ + +G+ + D+FTY+T++
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVN---RGIDQ-DIFTYNTLLDA 227
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
MA ++ +M + + PN +T+S++I+ A AG ++ A +LF EM G +
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLD 287
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL + +F+ A + R ME+
Sbjct: 288 RVSYNTLLSIYAKLGRFEEAMDVCRE-----------------------MENS------- 317
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHIS 550
+ TYN L+ Y V+ + EM+ +SPN ++
Sbjct: 318 -----------------GIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G A+ + + ++ G+ DVV Y+ I ++ ++ A SL +EM
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEV 637
I+PN+VTY +++ A R + V
Sbjct: 421 KEGIRPNVVTYNSIIDAFGRPATTESV 447
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 36/318 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S I+ + + + A+K+ M G+ PN +T++++I+AC G+ ++ + +F
Sbjct: 112 VYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDR 478
+EML+ G +P+ N LL C + ++ A RS + + +D Y+ D
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAA----RSLSCEMVNRGIDQDIFTYNTLLDA 227
Query: 479 ISNMEHKDK--QSITNTP--NFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYY 530
+ D + ++ P N +PN TY+ ++ KA D
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPN---------------VVTYSTMIDGYAKAGRLDDA 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L NEM+ +G+S + +S+ L+ G E A+ + + M G+ DVV Y +
Sbjct: 273 R--NLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 330
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + +FEEMK + PNL+TY TL+ S+ G L+ ++ + V+++ KA
Sbjct: 331 GGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSK-GGLY--REAMDVFREFKKA 387
Query: 651 GYKANDTYLKELIEEWCE 668
G KA+ LI+ C+
Sbjct: 388 GLKADVVLYSALIDALCK 405
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 166/432 (38%), Gaps = 82/432 (18%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L +D ++ P+ +++ VC G + +R++ ++ ++ + +I+ +N+L++
Sbjct: 168 LEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDA 227
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
L E+ M ++ ++ +Y+ ++ AG A+ ++ E+K L
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG---- 283
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD +Y+T++ ++A ++ A+ V +M ++G+ + +T+++L+ +
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+FEEM PN + L+ + + A +FR +
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF------------------- 384
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
K+ K Y+ L+ A C + A L+
Sbjct: 385 ----------------------------KKAGLKADVVLYSALIDALCKNGLVESAVSLL 416
Query: 537 NEMRTVGLSPNHISWTILIDACG-----------------------GSGNVEGALQILKI 573
+EM G+ PN +++ +IDA G S VE A + L
Sbjct: 417 DEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVA 476
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQA----FSLFEEMKHYQIQPNLVTYITLLRARS 629
RED + A K Q +F +M +I+PN+VT+ +L A S
Sbjct: 477 DREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACS 536
Query: 630 RYGSLHEVQQCL 641
R S E L
Sbjct: 537 RCNSFEEASMLL 548
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G VE A + K +G V A++ I RS +A +F MK
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
Y ++PNLVTY ++ A + G E ++ L ++ +M + G + + L+
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGV--EFKRVLEIFDEMLRNGMQPDRITFNSLL 190
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ N + +GK+ + ++ K SPN+ T+IDV G Y ++
Sbjct: 320 RKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + + ++ ++++L++ + ++ + + M K G+ ++ +YN ++ A
Sbjct: 380 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 439
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST----------IVKVF---ADAKWWQMA 382
T + G+ L+ + V + I+K+F A K Q
Sbjct: 440 RPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAK 499
Query: 383 ----------LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
L V M + PN +T+S+++NAC+ E+A L EE+
Sbjct: 500 NSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEEL 551
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 182/437 (41%), Gaps = 69/437 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C+ + + D+ A+ ++ + + PN+ +C T++ + L
Sbjct: 358 YCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV----------------KGLS 401
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
Q + L L++ M + G D+ +YN+++ C G A
Sbjct: 402 QQGLILQ-----------------ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ V AKG L DVFT++T++ + A+++ + M + GV+P+ IT++S
Sbjct: 445 DNL---VIDAIAKGHLP-DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNS 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWT 460
++N AG E M F+ M++ GC PN NIL ++ +A + + A L ++
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF---DKRFSFKPTTTT 517
L+ V G G D N + Y F D+++ F T T
Sbjct: 561 LTPDVVNFGTLMKGFCD-----------------NGDLDGAYQLFKRVDEQYKFSHTIAT 603
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNI++ A + + L N+M G SP+ ++ ++ID +GN+ L +
Sbjct: 604 YNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKI 663
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ P + + + +R+ +A + M H I P +V T+ A +
Sbjct: 664 EKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN--TIFEADKK----- 716
Query: 636 EVQQCLAVYQDMWKAGY 652
EV V +++ K G+
Sbjct: 717 EVAAPKIVVENLMKKGH 733
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ D+ +YN L+ C V A+ ++ + +G + D FTY++I+ +
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHY---LRKMVNEG-YEPDGFTYNSIIDGYCKLGM 335
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
Q A ++ D G P+ T+ SLIN G +++A+++F E ++ G +PN CN
Sbjct: 336 MQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNT 395
Query: 439 LLQACVEACQFDRAFRLFRS----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
L++ + +A +L WT + L +I + D
Sbjct: 396 LVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC--------KIGCVSDADNL 447
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
I + + H P T+N L+ C A+ ++ M G+SP
Sbjct: 448 VI----DAIAKGHL----------PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSP 493
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ +++ +G E + K+M E G P+++ Y + +++++++A +L
Sbjct: 494 DVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
EEM++ + P++V + TL++ G L Q + +K
Sbjct: 554 EEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYK 596
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 158/370 (42%), Gaps = 40/370 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ M LG+ D+ ++N L+ C G+ ++ + +V K + ++FT +
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV----LKRGVSPNLFTVNIF 257
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI-NACANAGLVEQAMHLFEEMLQAG 428
++ F A+++ D + G+TP+ IT+++LI C N +VE A H +M+ G
Sbjct: 258 IQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVE-AEHYLRKMVNEG 315
Query: 429 CEPNS--------QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EP+ C + + + D AF+ F + + G DG+ DR
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
N+ ++ + KP N L+K ++AL MNE
Sbjct: 376 NVFNEAMEK--------------------GLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G SP+ ++ ++I+ G V A ++ G PDV + T I + +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
L A + + M ++ + P+++TY ++L + G +V + ++ M + G N
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDV---MGTFKLMMEKGCVPNIIT 532
Query: 659 LKELIEEWCE 668
L E +C+
Sbjct: 533 YNILTESFCK 542
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 160/386 (41%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G ++ ++E + N ++ +N++MN+ F +VY M+ G++ D+ ++
Sbjct: 90 GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A+ + + ++ ++G + Y T++ F + A ++ E
Sbjct: 150 TIRMKSFCRTSRPHAARRL---LNNMPSQGC-ESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G+ P+ + ++ LI+ G V+++ L ++L+ G PN NI +Q +
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A RL DG ++
Sbjct: 266 MLNEAIRLL----------------DGVGRGLT--------------------------- 282
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYN L+ C ++ V+A + +M G P+ ++ +ID G ++
Sbjct: 283 -----PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A QIL+ G PD Y + I + + +A ++F E ++PNLV TL+
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ S+ G + Q L + +M + G
Sbjct: 398 KGLSQQGL---ILQALKLMNEMSENG 420
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ +P+ +YN +M Y +A + MR G+ P+ ++TI + + +
Sbjct: 105 FNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHA 164
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L M G VAY T I +A LFEEM I P+++ + L+
Sbjct: 165 ARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIH 224
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
R G + E ++ L + K G N + I+ +C+
Sbjct: 225 TLCRKGHVQESERLL---NKVLKRGVSPNLFTVNIFIQGFCQ 263
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 171/400 (42%), Gaps = 76/400 (19%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + +++ + L+ Y +N+L++ K +V+ M+ G D ++N LL
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLL--- 291
Query: 335 CLAGNTVLAQEIYGEVK-HLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKV 385
++YG+ + H EA GVLK V TY++++ + + A ++
Sbjct: 292 ----------DVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAEL 341
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
KE+M G+ P+ IT+++LI+ AG ++ A+ ++EML+ GC+PN N L++
Sbjct: 342 KEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGV 401
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+F +F
Sbjct: 402 RGKFPEMMAVFDDL---------------------------------------------- 415
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F P T+N L+ + V + EM+ G P ++ LI + G
Sbjct: 416 -RSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ +++I K M E G+ PD+ Y + R R +QA LF EM++ +P+ ++Y +
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LL A Y + ++ + A+ +D++ +++ +K L+
Sbjct: 535 LLHA---YANAKKLDKMKALSEDIYAEKIESHHGLVKTLV 571
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 207/479 (43%), Gaps = 39/479 (8%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
EL EE + + +PDV I + + + + +A+ YD +
Sbjct: 340 ELKEEMEVKGI---QPDV--------------ITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLK 306
+ PN+ +I + G+ G + + A+++DLRS ++ +N+L+ V N D +
Sbjct: 383 NGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE 442
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ V+K M+K G + + +Y L+ + G + EIY K + G+ D+ TY
Sbjct: 443 VS-GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIY---KRMIEAGIYP-DISTY 497
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ A W+ A K+ +M + P+ +++SSL++A ANA +++ L E++
Sbjct: 498 NAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYA 557
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E + L+ + + F L + + +L D N +
Sbjct: 558 EKIESHHGLVKTLVLVNSKVNNLSETEKAF--LELGRRRCSL----DINVLNAMVSVYGK 611
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGL 544
+ + + S K S +T TYN LM + D + + ++ E+++ G
Sbjct: 612 NRMVKKVEEIL------SLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGA 665
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ S+ +I A G G ++ A ++ M+ G+ PD+V Y +K V + ++A
Sbjct: 666 RPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAID 725
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L M +PN TY ++L+ R+G + + + L+ + K L EL+
Sbjct: 726 LVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHPGISKQEQQRLLELL 784
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 208/474 (43%), Gaps = 50/474 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + Y+++ N+ +N+L+ ++ KF + V
Sbjct: 352 PDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAV 411
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 412 FDDLRSAGFVPDVVTWNTLL---AVFGQNGLDSEVSGVFKEMKKSGYVP-ERDTYVSLIS 467
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + ++++ + M+ AG+ P+ T++++++A A G EQA LF EM C P
Sbjct: 468 SYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRP 527
Query: 432 NSQCCNILLQACVEACQFDR---------AFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ + LL A A + D+ A ++ L KT V + +++N+
Sbjct: 528 DELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLV-------NSKVNNL 580
Query: 483 EHKDKQSIT------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
+K + + V N+ S + K N ++K +V+ ++
Sbjct: 581 SETEKAFLELGRRRCSLDINVLNAMVSVYGK-----------NRMVK-------KVEEIL 622
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M+ ++ + ++ L+ G+ E IL ++ G PD +Y T I R
Sbjct: 623 SLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRK 682
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++K+A LF EMK + P++VTY +++ Y + ++ + + + M G K N+
Sbjct: 683 GQMKEASRLFSEMKSSGLIPDIVTYNIFVKS---YVANSMFEEAIDLVRYMVTRGCKPNE 739
Query: 657 TYLKELIEEWC-EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAA 709
+++E+C G I D + S++ Q LLE +A H +
Sbjct: 740 RTYNSILQEYCRHGKIADAKSFLSNLPQLHPGISKQEQQRLLELLARHTSRDGG 793
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 165/397 (41%), Gaps = 67/397 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314
+ Y T+I C Y ++ +++++R+ + FNSL L+VY
Sbjct: 248 DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSL-----------LDVY-- 294
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
G + E G +K +E G V TY++++ +
Sbjct: 295 -----------------------GKARMHDEAIGVLKEMELGGC-PPSVVTYNSLISSYV 330
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A ++KE+M G+ P+ IT+++LI+ AG ++ A+ ++EML+ GC+PN
Sbjct: 331 KDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLC 390
Query: 435 CCNILLQACVEACQFDRAFRLF---RSW-------TLSKTQVALGEDYDGNTDRISNMEH 484
N L++ +F +F RS T + G+ +G +S +
Sbjct: 391 TYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ--NGLDSEVSGVFK 448
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
+ K+S +VP +R ++ ++Y + C + + + M G+
Sbjct: 449 EMKKS-----GYVP--------ERDTYVSLISSY-----SRCGLFDQSMEIYKRMIEAGI 490
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ ++ ++ A G E A ++ M PD ++Y++ + +K+L + +
Sbjct: 491 YPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKA 550
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L E++ +I+ + TL+ S+ +L E ++
Sbjct: 551 LSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAF 587
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 35/436 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 126 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 185
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 186 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 241
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 360
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 361 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 468
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ + + +Q N + ++ + ++V+ +++ M + G + T L+
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKGLVPDRTAYTSLM-- 523
Query: 666 WCEGVIQDKNQNQGEV 681
D N QG V
Sbjct: 524 -------DGNFKQGNV 532
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 212/491 (43%), Gaps = 46/491 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
FC +FGK L L Y K + PN+ T++D C + M +AI Y D
Sbjct: 210 FC----KFGK---LPIGLEFYREMKGNGLKPNVVSYSTLVDA--FCKEGMMQQAIKFYVD 260
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + N Y + SL++ N +L + M ++GV ++ +Y L+ C A
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++G+ ++ GV+ ++ +Y+ ++ F AK AL++ ++ G+ P+ +
Sbjct: 321 MKEAEELFGK---MDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 376
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
+ + I + +E A + EM + G + NS L+ A ++ L
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + T V DG ++K + N + N F +
Sbjct: 437 KELDIEVTVVTFCVLIDGLC------KNKLVSKAVDYFNRISND--------FGLQANAA 482
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ ++ C D +V+A L +M GL P+ ++T L+D GNV AL +
Sbjct: 483 IFTAMIDGLCKD-NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E GM D++AYT+ + +L++A S EEM I P+ V I++L+ G
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQ 693
+ E + L Y + ND L + + + ++ + + E R ++ +P+
Sbjct: 602 IDEAVE-LQSYLMKHQLLTSDNDNALPNIYSD--QNLVSSREHEEQET----RISNLQPK 654
Query: 694 SLL-LEKVAVH 703
LL + K+A+H
Sbjct: 655 LLLGIYKLAIH 665
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 182/437 (41%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 142 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 201
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 262 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT-VGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ N + GL N +T +ID V
Sbjct: 438 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 497
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A + + M + G+ PD AYT+ + + + +A +L ++M ++ +L+ Y +L
Sbjct: 498 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 557
Query: 625 LRARSRYGSLHEVQQCL 641
+ S L + + L
Sbjct: 558 VWGLSHCNQLQKARSFL 574
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 52/275 (18%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F K + G +PT
Sbjct: 118 F------KDMIGAGA-----------------------------------------RPTV 130
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 131 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ QQ + Y DM + G N+ LI+ C+
Sbjct: 251 M---QQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 507 KRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KRF P T + N L+ K TD VK +M G P ++ I+ID G
Sbjct: 87 KRFRVFPKTRSCNGLLHRFAKLGKTD--DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 144
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+VE A + + M+ G+ PD V Y + I + RL FEEMK +P+++TY
Sbjct: 145 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
L+ ++G L L Y++M G K N L++ +C EG++Q
Sbjct: 205 ALINCFCKFGKL---PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 252
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 190/449 (42%), Gaps = 45/449 (10%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
V+ NI V N N D ++L ++GV D+ +YN ++ C A A+++
Sbjct: 194 VSYNI-VINGFFNEGQVDKAYSL-----FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + + KGV K + TY+TI+ A+ MA V + M+ GV P+ +T++++I+
Sbjct: 248 F---QQMVEKGV-KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIID 303
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--------- 457
A V++A +F++M+ G +P+ N ++ +A D+A +F+
Sbjct: 304 GLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKP 363
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYSSFDKRF 509
++T+ + + D M K + T N ++ + +R
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Query: 510 ------SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+P TY +L+ C + ++L + M G+ P+ + I++ G
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR--LKQAFSLFEEMKHYQIQPNLV 619
G + +L +M +G+SP+ + T I C +KR + + +F +MK + PN+V
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVI--CAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
TY TL+ A + G V + + M G N+ L+ C DK +
Sbjct: 542 TYGTLIDALCKLG---RVDDAVLQFNQMINEGVTPNNVVFNSLVYGLC---TVDKWEKVE 595
Query: 680 EVTLCRRTNSQRPQSLLLEKVAVHLQKSA 708
E+ L RP + V +L K
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 187/423 (44%), Gaps = 46/423 (10%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y V+ ++ +N++++ A ++ +V++ M + GV + +YN ++ C
Sbjct: 213 YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCK 272
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A +A+ ++ + + KGV +V TY+TI+ A+ A V + M+ GV P
Sbjct: 273 AQEVDMAEGVF---QKMVDKGVKPSNV-TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP 328
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T++++I+ A +++A +F++M+ G +P++ I++ +A DRA +F
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVF 388
Query: 457 RSWT-------------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNT---------P 494
+ L ++ G+ ++ RI M D + T
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQ-WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCK 447
Query: 495 NFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLS 545
N N S FD R KP+ T Y I++ Y K ++EM + G+S
Sbjct: 448 NGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG-----YGKKGALSEMHDLLNLMVANGIS 502
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PNH + +I A ++ + I M++ G+SP+VV Y T I + R+ A
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M + + PN V + +L+ +V++ ++ +M G + + + ++
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE---LFLEMLNQGIRPDIVFFNTVLCN 619
Query: 666 WCE 668
C+
Sbjct: 620 LCK 622
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 29/385 (7%)
Query: 267 GICGDYMKSRAIYEDLRSQ---NVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKL 318
G+C A++ LR L + +N+L+ A + + L + + Q
Sbjct: 128 GLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDS 187
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D+ SYNI++ G A ++ E+ + DV TY+TI+ A+
Sbjct: 188 SCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG-------VSPDVVTYNTIIDGLCKAQE 240
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V + M+ GV PN +T++++I+ A V+ A +F++M+ G +P++ N
Sbjct: 241 VDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNT 300
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A DRA +F+ D D ++ D +
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMI----------DRGVKPDHVTYNTIIDGLCKAQAIDKAE 350
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
DK KP TY I++ C R + + +M G+ PN+ ++ LI
Sbjct: 351 GVFQQMIDK--GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E +Q +K M + PDV Y + ++ + +A SLF+ M I+P
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468
Query: 617 NLVTYITLLRARSRYGSLHEVQQCL 641
++ Y +L + G+L E+ L
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLL 493
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 180/426 (42%), Gaps = 38/426 (8%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ TIID G+C K+ +++ + + V + + +++ A +
Sbjct: 328 PDHVTYNTIID--GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V++ M GV + +YN L+ G +E+ +K + A L+ DVFTY +
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW---EEVVQRIKEMSAHD-LEPDVFTYGLL 441
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + + M+ G+ P+ + +++ G + + L M+ G
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEH 484
PN + N ++ A + D +F + LS V G D R+ +
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561
Query: 485 KDKQSITN--TPN-FVPNS---------HYSSFDKRF------SFKPTTTTYNILMKACC 526
+ Q I TPN V NS + ++ F +P +N ++ C
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++A L++ M +GL P+ IS+ LID + ++ A+++L M G+ P++V
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T + ++ R+ A+ LF EM + P + TY T+L R G E ++ +Y
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE---LY 738
Query: 645 QDMWKA 650
+M K+
Sbjct: 739 VNMIKS 744
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 65/413 (15%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K+ + + + K+ SPN+ T+ID G + + +
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT N VFNSL+ + E++ M G+ D+ +N +L C G
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ A+ + + + G LK DV +Y+T++ A A+K+ + M+SAG+ PN ++
Sbjct: 627 MEARRL---IDSMVCMG-LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
+++L++ AG ++ A LF EML+ G P + N +L + +F A L+
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 457 ---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ W++ + L DG F N + FD+ F
Sbjct: 743 KSRKLWSICTYSIIL----DG---------------------FCKN---NCFDEAFK--- 771
Query: 514 TTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
I C D L + I++ I+ID G E A+ +
Sbjct: 772 ------IFQSLCSMD---------------LQLDIITFNIMIDGLFKGGRKEDAMDLFAA 810
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ +G+ P VV Y + + L++ LF M+ PN L+R
Sbjct: 811 IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIR 863
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 37/316 (11%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S V P+ T+S +I G +E F +L+ G + N LL+ + +
Sbjct: 77 SNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136
Query: 451 RAFR-LFRSWTLSKTQ---VALGEDYDGNTDRISNMEHK-------DKQSITNTP----- 494
A L R + V+ G DR E + D Q + +P
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 495 NFVPNSHYS--SFDKRFSF------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
N V N ++ DK +S P TYN ++ C + R + + +M G+
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN++++ +ID + V+ A + + M + G+ P V Y T I +++ + +A
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F++M ++P+ VTY T++ + ++ + + V+Q M G K ++ +I+
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE---GVFQQMIDKGVKPDNLTYTIIID 373
Query: 665 EWC--------EGVIQ 672
C EGV Q
Sbjct: 374 GLCKAQSVDRAEGVFQ 389
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 192/422 (45%), Gaps = 39/422 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I+ G+C G K+ + + + ++ +NS++N + D
Sbjct: 156 PDTTTFNTLIN--GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M++ V AD+ +Y+ ++ + C G A ++ K +E KG+ K V TY+++
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF---KEMETKGI-KSSVVTYNSL 269
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V+ A W + +DM+S + PN IT++ L++ G +++A L++EM+ G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYDGNTDRISNME 483
PN N L+ + A + +K T +L + Y R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY-CMVKRVD--- 385
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
D + + + KR TY+IL++ C + L EM +
Sbjct: 386 --DGMKV-----------FRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ +++ IL+D +G +E AL+I + +++ M +V YTT I+ + +++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A++LF + ++PN++TY ++ + GSL E L + M + G ND
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL---RKMEEDGNAPNDCTYNT 548
Query: 662 LI 663
LI
Sbjct: 549 LI 550
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 161/380 (42%), Gaps = 58/380 (15%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N + K + V M + G DM +YN ++ C +G+T LA + ++
Sbjct: 161 FNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA---FDMLR 217
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E + V K DVFTYSTI+ A+ + ++M + G+ + +T++SL+ A
Sbjct: 218 KMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G L ++M+ PN N+LL V+ + A L+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY--------------- 321
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
K+ IT P TYN LM C
Sbjct: 322 ---------------KEMITR-----------------GISPNIITYNTLMDGYCMQNRL 349
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A +++ M SP+ +++T LI V+ +++ + + + G+ + V Y+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
++ +S ++K A LF+EM + + P+++TY LL G L ++ L +++D+ K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL---EKALEIFEDLQK 466
Query: 650 AGYKANDTYLKELIEEWCEG 669
+ +IE C+G
Sbjct: 467 SKMDLGIVMYTTIIEGMCKG 486
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 142/332 (42%), Gaps = 42/332 (12%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K LE G+ +++T + ++ F A V ++ G P+T T+++LIN
Sbjct: 112 KQLELNGIAH-NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCL 170
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WT 460
G V +A+ L + M++ GC+P+ N ++ + AF + R +T
Sbjct: 171 EGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFT 230
Query: 461 LSKTQVALGED--YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S +L D D ME K K + TY
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETK------------------------GIKSSVVTY 266
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L++ C + L+ +M + + PN I++ +L+D G ++ A ++ K M
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+SP+++ Y T + RL +A ++ + M + P++VT+ +L++ Y +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKR 383
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V + V++++ K G AN L++ +C+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 153/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + K E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLGIVM--YTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 168/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P+M +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDMVTYNSIVN--GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI---------------------NAC 408
+ VF Q A ++ ++M++ G++PN IT+++L+ N C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 409 AN--------------AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YS K + ++P TTT+N L+ C + KA L++ M G P+ +++ +++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNG 202
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ A +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 203 ICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+VTY +L+R + G ++ L +DM N L++ + EG +Q+ N+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 92/343 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G LA+E++ E + + GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQE---MVSHGVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------LC 519
Query: 457 RSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ +LS+ + L + + DGN P
Sbjct: 520 KKGSLSEANILLRKMEEDGNA------------------------------------PND 543
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 198/472 (41%), Gaps = 71/472 (15%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG +D ALR + + +PN T++D GD+ ++ +++D+ ++ + +
Sbjct: 290 FGDYKD---ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKS 346
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
IY FN+++N ++ E +K M++LG D +Y L C GN +E +
Sbjct: 347 IYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNV---EEAFK 403
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E + + S IV +F K ++ + + +M + G++PN +T+ +LI
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKL-IDLLAEMDTRGLSPNVVTYGALIAGW 462
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCC----------------NILLQA---------- 442
+ G +++A + EM+ G PN C N+LLQ
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDH 522
Query: 443 -CVEACQFDRAFRLFRSWTLSKT--QVALGEDYDGNTDRISNMEHKDKQSITNTPN--FV 497
C+E Q + R W ++ T + A+ N M K N F+
Sbjct: 523 RCLEDFQ-NADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFL 581
Query: 498 PNSHYSSFDKRFSF----------------------------KPTTTTYNILMKACCTDY 529
SH S F++ P TTYN L+ C
Sbjct: 582 GLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSG 641
Query: 530 Y--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y R + L +++ GL PN +++ ILID SG+ AL + M ++G+SP ++ Y+
Sbjct: 642 YLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYS 701
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ I + +++A L EMK + + T+ L+ ++G + ++ +
Sbjct: 702 SLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 186/465 (40%), Gaps = 63/465 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ + SA+ YD ++ P+++ C +++ G ++ ++ LN
Sbjct: 43 KRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAV 102
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL++ V+ D++ V K M + GVM + + +L+K C A+++ +
Sbjct: 103 SYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKV---L 159
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CA 409
+ +E + + +D + Y ++ + A++V+++ML G+ N +SLIN C
Sbjct: 160 REMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCK 219
Query: 410 NA----------------------------------GLVEQAMHLFEEMLQAGCEPNSQC 435
N GL +A ++ ++ML+ G EP
Sbjct: 220 NGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVT 279
Query: 436 CNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL+ + A RL+ ++ +V DG ++ + +++T
Sbjct: 280 YNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG-LFKMGDFS----RALTL 334
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ + + +N ++ C + K M +G P+ I+
Sbjct: 335 WDDILAR----------GINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L D GNVE A +I + M ++ + P + Y + I SK++ + L EM
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ PN+VTY L+ G L + + Y +M G+ N
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRL---DKAFSAYFEMIGKGFAPN 486
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 147/353 (41%), Gaps = 51/353 (14%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K L V+ NM K G + S N LL G + A +Y +++ L+ + DVF
Sbjct: 12 VKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD----IVPDVF 67
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T + +V + A + A++ +M G N ++++SL++ + G +E A + + M
Sbjct: 68 TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ G N +L++ + C+ + A ++ R ME
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLRE-----------------------MEK 164
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
+D + +++ Y + K D RV+ +EM VGL
Sbjct: 165 EDGVVV----------------DEYAYGALIDGYCKVGKM--GDAIRVR---DEMLKVGL 203
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
N LI+ +G V ++L MR+ + PD +Y T + R +AF+
Sbjct: 204 KMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFN 263
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ ++M I+P +VTY TLL+ R+G + + L ++ M + G N+
Sbjct: 264 VCDQMLRKGIEPTVVTYNTLLKGLCRFG---DYKDALRLWHLMLQRGVTPNEV 313
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 199/492 (40%), Gaps = 69/492 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ + +K + +AL +D K+ P++ C +++ G+ + +Y+ +R ++
Sbjct: 3 LKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDI 62
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+++ ++N A ++ +E + M+KLG + SYN L+ G+ A+
Sbjct: 63 VPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK- 121
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSL 404
G +K + KGV++ V T + ++K + + A KV +M GV + + +L
Sbjct: 122 --GVLKFMSEKGVMRNKV-TLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGAL 178
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTL 461
I+ G + A+ + +EML+ G + N CN L+ + Q RL R L
Sbjct: 179 IDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYN 519
+ DG +D S + ++ D+ R +PT TYN
Sbjct: 239 KPDSYSYCTLVDGYC--------RDGLS---------SKAFNVCDQMLRKGIEPTVVTYN 281
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
L+K C DY L + M G++PN + + L+D G+
Sbjct: 282 TLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILAR 341
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
++GA + K M E G PD + Y T + +++A
Sbjct: 342 GINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F + E+M+ +I P++ Y +L+ + ++ LA +M G N L
Sbjct: 402 FKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA---EMDTRGLSPNVVTYGAL 458
Query: 663 IEEWCEGVIQDK 674
I WC+ DK
Sbjct: 459 IAGWCDQGRLDK 470
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 31/356 (8%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVM 321
G GD ++ R +++ + +N++V NSL+N H+ + L M+KL +
Sbjct: 186 GKMGDAIRVR---DEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC---MRKLDLK 239
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D SY L+ C G L+ + + + KG+ + V TY+T++K ++
Sbjct: 240 PDSYSYCTLVDGYCRDG---LSSKAFNVCDQMLRKGI-EPTVVTYNTLLKGLCRFGDYKD 295
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL++ ML GVTPN + + +L++ G +A+ L++++L G + N ++
Sbjct: 296 ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMIN 355
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNS 500
+ + D A F K LG DG T R +S+ K + N
Sbjct: 356 GLCKMGEMDGAKETF------KRMEELGCKPDGITYRTLSDGYCK----VGNVEEAFKIK 405
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
++ F P+ YN L+ T ++ L+ EM T GLSPN +++ LI
Sbjct: 406 EKMEKEEIF---PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGW 462
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G ++ A M G +P+V+ + + R R+ +A L ++M + +
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDL 518
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV 171
S+EM S IV +I ++ +L +++ G++P + G+ L+ C D G +
Sbjct: 416 SIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGA---LIAGWC----DQGRL 468
Query: 172 E-MFVGLMEVLEEFRLP--------------VKELDEEFRIVQLCVNKPDVNLAIRYACI 216
+ F E++ + P + +DE ++Q V D +L + + C+
Sbjct: 469 DKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV---DFDLVLDHRCL 525
Query: 217 --VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDY 272
ADI +K D D S S PN + I + G+C G
Sbjct: 526 EDFQNADI----------RKLDCWKIADTLDESAIKFSLPNNVVYN--IAMAGLCKSGKV 573
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+R + L + T + + + +L++ A + + M G++ ++ +YN L
Sbjct: 574 NDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNAL 633
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L C +G A+ ++ ++ HL KG++ +V TY+ ++ + + + AL ++ ML
Sbjct: 634 LNGLCKSGYLDRARRLFDKL-HL--KGLIP-NVVTYNILIDGYCKSGSPREALDLRGKML 689
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
G++P+ IT+SSLIN VE+AM L EM + + + L++ C++
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ 744
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 62/292 (21%)
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
A G+V+ A+H+F+ M + G +P+ + CN LL V+
Sbjct: 7 AEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKR---------------------- 44
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACC 526
GE Y S +D +R P T I++ A C
Sbjct: 45 GESY---------------------------SAVLVYDQMRRLDIVPDVFTCAIMVNAYC 77
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
R + EM +G N +S+ L+D G++EGA +LK M E G+ + V
Sbjct: 78 KAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKV 137
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
T IK + ++++A + EM K + + Y L+ + G + + + V
Sbjct: 138 TLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA---IRV 194
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE-VTLCRRTNSQRPQS 694
+M K G K N LI +C ++ ++GE + +C R +P S
Sbjct: 195 RDEMLKVGLKMNLFVCNSLINGYC----KNGQVHEGERLLMCMRKLDLKPDS 242
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P+ + T+I G ++ + +++ ++ + NI +N+L+N + L
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ + G++ ++ +YNIL+ C +G+ A ++ G++ K + + TYS+++
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM----LKEGISPSIITYSSLI 704
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + A+K+ +M ++ V T+S L+ C G V++ M M+ C
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKK-MSKLHNMMHMAC- 762
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
P++ I +E + A + S+T+S+
Sbjct: 763 PSA---GITSHKQMELSELSNAKEMLDSYTISEA 793
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 151/357 (42%), Gaps = 56/357 (15%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+ AD+ +YN LL AC G L E + + G+L D+ TYS +V+ F
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRG---LGDEAEMVFRTMNEGGILP-DITTYSYLVETFG 56
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ ++ ++M S G P+ +++ L+ A A +G +++AM +F +M AGC PN+
Sbjct: 57 KLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAA 116
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ILL ++D LF +S T+
Sbjct: 117 TYSILLNLYGRHGRYDDVRDLFLEMKVSNTE----------------------------- 147
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWT 552
P TYNIL+ Y V L ++M + PN ++
Sbjct: 148 ------------------PNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE 189
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI ACG G E A +IL M E G+ P AYT I+ ++ ++A F M
Sbjct: 190 GLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV 249
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+P + TY +L++ ++ G E + A+ M ++G N +IE + +G
Sbjct: 250 GSKPTVETYNSLIQMFAKGGLYKESE---AILLKMGQSGVARNRDTFNGVIEAFRQG 303
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN ++++ G G Y R ++ +++ N N +N L+NV K + +
Sbjct: 113 PNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTL 172
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +M + V +M +Y L+ AC G A++I + H+ KGV+ Y+ +++
Sbjct: 173 FHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKI---LLHMNEKGVVPSSK-AYTGVIE 228
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ AL M G P T++SLI A GL +++ + +M Q+G
Sbjct: 229 AYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVAR 288
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N N +++A + QF+ A + +
Sbjct: 289 NRDTFNGVIEAFRQGGQFEEAIKAY 313
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + + + +G+ AL A++ + S P + ++I + G Y +S
Sbjct: 216 VVPSSKA-YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKES 274
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + V N FN ++ +F ++ Y M+K D + +L
Sbjct: 275 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSV 334
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E +GE+K L G+L V Y ++ V+A A W A ++ ++M +
Sbjct: 335 YCFAGLVEESEEQFGEIKAL---GILP-SVMCYCMMLAVYAKADRWDDAHQLLDEMFTNR 390
Query: 394 VTPNTITWSSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ +I +N +VE ++FE++ GC + N LL+A Q
Sbjct: 391 VSNIHQVIGQMIRGDYDDDSNWQMVE---YVFEKLKSEGCSLGVRFYNTLLEALWWLGQK 447
Query: 450 DRAFRLFRSWT 460
+RA R+ T
Sbjct: 448 ERATRVLNEAT 458
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 206 DVNLAIRYACIVPRADI--LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
D+ L ++ + P A + N E G +++V+ +D ++++ PNM +I
Sbjct: 136 DLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF--HDMVEENVE-PNMETYEGLI 192
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
CG G + ++ I + + V + + ++ + L + M ++G
Sbjct: 193 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 252
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YN L++ G L +E + + GV + + T++ +++ F ++
Sbjct: 253 PTVETYNSLIQMFAKGG---LYKESEAILLKMGQSGVAR-NRDTFNGVIEAFRQGGQFEE 308
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+K +M A P+ T ++++ AGLVE++ F E+ G P+ C ++L
Sbjct: 309 AIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLA 368
Query: 442 ACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNME 483
+A ++D A +L +S +G+ G+ D SN +
Sbjct: 369 VYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQ 413
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 195/436 (44%), Gaps = 34/436 (7%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y ++ SPN+ +I + G+ G + + +++DLRS ++ +N+L+
Sbjct: 379 AALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLL 438
Query: 299 NV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
V N D + + V+K M+K G + + +Y L+ + G A EIY K +
Sbjct: 439 AVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIY---KRMIE 494
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G+ D+ TY+ ++ A W A K+ +M P+ +++SSL++A ANA ++
Sbjct: 495 AGIYP-DISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLD 553
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILL---QACVEACQFDRAFRLFRSWTLS---KTQVALG 469
+ L E++ EP++ L+ + ++AF+ R S A+
Sbjct: 554 KMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMV 613
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCT 527
Y N M K ++ +T K S + TYN LM +
Sbjct: 614 SIYGKN-----KMVKKVEEVLT-------------LMKENSINHSAATYNSLMHMYSRLG 655
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D + +A++ E+++ G+ P+ S+ +I A G G ++ A ++ M+ G+ PD+V Y
Sbjct: 656 DCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYN 715
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IK V + ++A L + +PN TY ++L R+G + E + L+ +
Sbjct: 716 IFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKI 775
Query: 648 WKAGYKANDTYLKELI 663
+ K L EL+
Sbjct: 776 YPGISKEEKHRLLELL 791
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 176/386 (45%), Gaps = 31/386 (8%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L + NV L++Y S M+V K + + +M++ G+ D +YN L+ C G
Sbjct: 220 LVTYNVVLHVY---SKMSV---PWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYR 273
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E+K A G + D T+++++ V+ A+ + A+ V + M +AG TP+ +T+
Sbjct: 274 EAAQMFDEMK---AAG-FEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTY 329
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SLI+A GL+E+A+ L +EM G +P+ L+ + D A +
Sbjct: 330 NSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVR 389
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYN 519
+ L + + M H + T FD + + P T+N
Sbjct: 390 NGCSPNLC-----TYNALIKM-HGVRGKFTEM--------MIVFDDLRSAGYVPDVVTWN 435
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI + G + A++I K M E
Sbjct: 436 TLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 495
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD+ Y + R R QA LF EM+ +P+ ++Y +LL A Y + ++
Sbjct: 496 GIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHA---YANAKKL 552
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELI 663
+ A+ +D++ + ++ +K L+
Sbjct: 553 DKMKALSEDIYAQRIEPHNWLVKTLV 578
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 200/497 (40%), Gaps = 83/497 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + +D K P+ +++DV G + ++ + + + + T ++ +NSL++
Sbjct: 275 AAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLIS 334
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV------- 350
D L+ LE+ + M+ G+ D+ +Y L+ G A Y E+
Sbjct: 335 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSP 394
Query: 351 -------------------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
L + G + DV T++T++ VF V
Sbjct: 395 NLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVP-DVVTWNTLLAVFGQNGLDSEVSGV 453
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M AG P T+ SLI++ + GL +QAM +++ M++AG P+ N +L A
Sbjct: 454 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 513
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS---------NMEHKDKQSITNTPNF 496
++ +A +LF A ED D D +S N + DK + +
Sbjct: 514 GGRWVQAEKLF----------AEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIY 563
Query: 497 VPNSHYSSF---------DKRFSFKPTTTTYNILMKACCT----------DYY------- 530
++ +K S T + L + C+ Y
Sbjct: 564 AQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 623
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+V+ ++ M+ ++ + ++ L+ G+ E IL ++ GM PD +Y T I
Sbjct: 624 KVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVI 683
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
R ++K+A LF EMK ++P++VTY +++ Y + ++ + + + +
Sbjct: 684 YAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS---YVANLMFEEAIDLVRYLVAQ 740
Query: 651 GYKANDTYLKELIEEWC 667
G K N+ ++E +C
Sbjct: 741 GCKPNERTYNSILEGYC 757
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 164/389 (42%), Gaps = 51/389 (13%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
+ Y T+I C G Y ++ +++++++ + FNSL++V A + + V
Sbjct: 255 DRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVL 314
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M+ G + +YN L+ A G L +E + +E +G +K DV TY+T++
Sbjct: 315 KKMENAGCTPSVVTYNSLISAYVKDG---LLEEALELKQEMEFRG-MKPDVVTYTTLISG 370
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
AL +M+ G +PN T+++LI G + M +F+++ AG P+
Sbjct: 371 LDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPD 430
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL G+ +G +S + + K++
Sbjct: 431 VVTWNTLL-------------------------AVFGQ--NGLDSEVSGVFKEMKKA--- 460
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
++P +R ++ ++Y + C + + + M G+ P+ ++
Sbjct: 461 --GYIP--------ERDTYVSLISSY-----SRCGLFDQAMEIYKRMIEAGIYPDISTYN 505
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ A G A ++ M + PD ++Y++ + +K+L + +L E++
Sbjct: 506 AVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQ 565
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+P+ TL+ ++ SL E ++
Sbjct: 566 RIEPHNWLVKTLVLVNNKVNSLSETEKAF 594
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 175/397 (44%), Gaps = 35/397 (8%)
Query: 290 NIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++V+N+L+N D KF ++K M + G+ A+ +Y+IL+ + C G A
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ +K+ V+ Y++++ A+ ++M+ G+ P ++++SLI+
Sbjct: 425 GKM----IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISG 480
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKT 464
N G + +A L+ EM G PN+ L+ A A + AFRLF +
Sbjct: 481 YCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPN 540
Query: 465 QVAL-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+V G +GNT + + ++ Q VP++ ++++P ++
Sbjct: 541 EVTYNVMIEGHCKEGNTVKAFELLNQMVQK-----GLVPDT--------YTYRPLISSLC 587
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C K ++++ N + ++ L+ G + AL + + M + G+
Sbjct: 588 STGRVC-----EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D+V Y I ++ + F L + M +++P+ V Y +++ S+ GS V++
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS---VKK 699
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
++ M G N LI E C+ + DK +
Sbjct: 700 AFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 199/482 (41%), Gaps = 59/482 (12%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
+ V +K +V A + KK + P++++ +I+ G + ++ +++++ +
Sbjct: 336 SLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK 395
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ K ++ M G+ + YN L+ C GN A
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAA 455
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E + KG LK V +Y++++ + + A ++ +M G+ PNT T+++
Sbjct: 456 VSFFDE---MIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+A A + A LF+EML+ PN N++++ + +AF L
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV--- 568
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q L D IS++ + + F+ + H R FK Y+ L+
Sbjct: 569 -QKGLVPDTYTYRPLISSLCSTGR--VCEAKKFIDDLH------REHFKLNEMCYSALLH 619
Query: 524 ACCT-------------------------------------DYYRVKALMNEMRTVGLSP 546
C D V L+ M L P
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + +T +ID +G+V+ A I IM ++G +P++V YTT I ++ + +A L+
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW 739
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+EM PN VTY L +R GS+ + Q ++ DM K G AN L+ +
Sbjct: 740 KEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ---LHNDMLK-GLLANTVSYNILVRGF 795
Query: 667 CE 668
C+
Sbjct: 796 CK 797
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 174/390 (44%), Gaps = 66/390 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P+ Y R +I G +++ +DL ++ LN +++L++ + L+ L V
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K GV D+ Y +L+ +T ++G +K++ + L+ D Y++++
Sbjct: 634 CREMVKRGVDMDLVCYAVLIDGTIKEQDT---SAVFGLLKNMHDQR-LRPDKVIYTSMID 689
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A + A + + M+ G TPN +T+++LIN AGL+++A L++EML + P
Sbjct: 690 GYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTP 749
Query: 432 N--SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--K 487
N + CC L ++A +L H D K
Sbjct: 750 NHVTYCC--FLDHLAREGSMEKAVQL----------------------------HNDMLK 779
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGL 544
+ NT +YNIL++ C RV+ L++EM +
Sbjct: 780 GLLANT----------------------VSYNILVRGFCK-LGRVEEATKLLDEMIDNAI 816
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I+++ +I C GN++GA++ M G+ PD +AY I C + L +AF
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
L ++M ++PN T+ +L SR S+
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSHGASRKFSI 906
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 133/347 (38%), Gaps = 21/347 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ YN+L+ C A EI L KG+ +V TY T+V + +++
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIK---NGLIQKGLTASEV-TYCTLVLGLCKVQEFEVG 315
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
V ++M+ G P SSL+ G V A L + + G P+ N L+ +
Sbjct: 316 AGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINS 375
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ +FD A LF+ K A Y D D H+
Sbjct: 376 LCKDGKFDEAELLFKEMG-EKGLCANDVTYSILIDSFCRRGKLDTA-----------IHF 423
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
K T YN L+ C + + +EM GL P +S+T LI
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G + A ++ M G++P+ +TT I R+ R+ AF LF+EM + PN VT
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y ++ + G+ + + M + G + + LI C
Sbjct: 544 YNVMIEGHCKEGN---TVKAFELLNQMVQKGLVPDTYTYRPLISSLC 587
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 179/427 (41%), Gaps = 37/427 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
+ G C G ++ +Y ++ + + N Y F +L++ A+ + ++ M + +
Sbjct: 478 ISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M + +YN++++ C GNTV A E+ + + KG++ D +TY ++
Sbjct: 538 MPNEVTYNVMIEGHCKEGNTVKAFEL---LNQMVQKGLVP-DTYTYRPLISSLCSTGRVC 593
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A K +D+ N + +S+L++ G + A+ + EM++ G + + C +L+
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653
Query: 441 QACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT----NT 493
++ F L ++ L +V DG + S + I T
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713
Query: 494 PNFVPNSHYSS-------FDK-RFSFKP---TTTTYNILMKACCTDYY-------RVKAL 535
PN V + + DK +K + +T N + C D+ + L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
N+M GL N +S+ IL+ G VE A ++L M ++ + PD + Y+T I C R
Sbjct: 774 HNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L A ++ M + ++P+ + Y L+ G E+ + + DM + G K N
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAG---ELGKAFELRDDMIRRGVKPN 889
Query: 656 DTYLKEL 662
K L
Sbjct: 890 QATHKSL 896
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 25/280 (8%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P T ++N A V+ + LF E+L G P+ I + V R+F
Sbjct: 189 LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPD-----IYIYVAV-----IRSF 238
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFS 510
+++ +K + E D N + + H K+K+ + N
Sbjct: 239 CELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVE--IKNGLIQK-----G 291
Query: 511 FKPTTTTY-NILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ TY +++ C + V A +M+EM +G P + + L++ G V A
Sbjct: 292 LTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAF 351
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ +++ G P + Y I + + +A LF+EM + N VTY L+ +
Sbjct: 352 DLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSF 411
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
R G L L M AG K LI C+
Sbjct: 412 CRRGKLDTAIHFLG---KMIMAGIKITVYPYNSLINGHCK 448
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 194/460 (42%), Gaps = 71/460 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P + T+I+ G+C G++ ++ +++D+ ++ ++Y +N+++N +
Sbjct: 161 PTIVTFTTLIN--GLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAA 218
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M++ G +M +Y+ L+ + C L E +++AKG+ D+FTY+++
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLC---RDRLVNEALDIFSYMKAKGI-SPDIFTYTSL 274
Query: 370 VKVFADAKWWQ-----------------------------------MALKVKEDMLSAGV 394
++ W+ AL V + M GV
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T+SSL+ + V +A LF M+ GC+PN NIL+ +A + D A +
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 455 LFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
LF L+ V+ G E +D N N +
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR-----NMCTNGNL--------- 440
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY+IL+ C Y KA L M++ L PN + +TIL+ A SGN + A +
Sbjct: 441 -PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK 499
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + G+ P V YTT I + L +A F M+ P+ ++Y ++R
Sbjct: 500 LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLL 559
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++ + + L + +M G+ A+ ++ + E C+G
Sbjct: 560 QH---KDESRALLLVGEMRDRGFIAD---VRPCLSEVCQG 593
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 174/395 (44%), Gaps = 59/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + R + AL + K SP+++ ++I G+C + ++ A+
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ--GLCKFSRWKEASALL 291
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S N+ +I FN L++ + K + L V K M ++GV ++ +Y+ L+ L
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ V A++++ H+ K ++F+Y+ ++ + AK A+++ +M+ G+TPN
Sbjct: 352 TDVVEARKLF----HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++++LI+ G + +A LF M G P+ +ILL + +AFRLFR
Sbjct: 408 NVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFR 467
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ QS PN V
Sbjct: 468 AM----------------------------QSTYLKPNLV-------------------M 480
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ A C ++ + L +E+ GL P+ +T +I+ G ++ AL+ + M
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
DG PD ++Y I+ ++ K +A L EM+
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR 575
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 174/417 (41%), Gaps = 45/417 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NIY + MN DL F+ V + KLG+ + ++ L+ C G A E
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFS--VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + + AKG + DV+TY+TI+ A + + M AG PN +T+S+LI
Sbjct: 185 LFDD---MVAKGC-QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LS 462
++ LV +A+ +F M G P+ L+Q + ++ A L T +
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300
Query: 463 KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
V D E K + PN V YSS +S
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT---YSSLMYGYSLWTDVVEA 357
Query: 512 ------------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+ C +A L NEM GL+PN++S+ LI
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A + + M +G PD+ Y+ + + L +AF LF M+ ++PN
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
LV Y L+ A + G+ + ++ ++ +++ G + + +I C EG++ +
Sbjct: 478 LVMYTILVHAMCKSGNHKDARK---LFSELFVQGLQPHVQLYTTIINGLCKEGLLDE 531
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 163/366 (44%), Gaps = 29/366 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + K M+ +G+ ++ + +I + C L + +V L L+ + T++T
Sbjct: 113 ISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLG----LQPTIVTFTT 168
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+++ +DM++ G P+ T++++IN G A L ++M +AG
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG 228
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM----EH 484
C+PN + L+ + + A +F S+ +K + D T I +
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIF-SYMKAK---GISPDIFTYTSLIQGLCKFSRW 284
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
K+ ++ N + P T+N+L+ C + +AL + M +
Sbjct: 285 KEASALLNEMT------------SLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM 332
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN ++++ L+ +V A ++ +M G P++ +Y I ++KR+ +A
Sbjct: 333 GVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEA 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF EM H + PN V+Y TL+ + G L E Q ++++M G + L
Sbjct: 393 MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD---LFRNMCTNGNLPDLFTYSIL 449
Query: 663 IEEWCE 668
++ +C+
Sbjct: 450 LDGFCK 455
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y V +L +M VGLSPN + +I ++ V+ +L + + G+ P +V +TT
Sbjct: 109 YDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTT 168
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + QA LF++M QP++ TY T++ + G E + + M
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG---ETAAAAGLLKKME 225
Query: 649 KAGYKANDTYLKELIEEWC 667
+AG + N LI+ C
Sbjct: 226 EAGCQPNMVTYSTLIDSLC 244
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 195/467 (41%), Gaps = 80/467 (17%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGE-----------------DYDGNTDRISNMEHKDKQSITNTP 494
+ Q+ LG D T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTY 658
+ PNLVTY TL+R Y +L V Q + ++ M G+K N D+Y
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKGWKPNEDSY 530
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 175/432 (40%), Gaps = 40/432 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS--LMNVNAHDLKFTLEVY 312
N+ T+I+ + GD ++ L + + Y + S L A L V+
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M G + +Y LL AG A ++ ++ D Y+T+V
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMR----ADSCAPDTHVYATMVHG 186
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+A + A + E+ +S G PN + +++LI+ NAG +E A+ +FE M C PN
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
+ L+ ++ + +RA LF ++ T + G+ +G+ + H
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ T VPN T+++L+ A C + + +
Sbjct: 307 -----LMETNGLVPNDW---------------TFSVLIDALCKREKVEEAQLFLGSLVKK 346
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N + +T LID +G ++ A ++++ M +G PD +Y++ I R K+L QA
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ E+M IQ + VTY ++ R ++ ++ M G +
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK---IFDKMIATGINPDIVTYTVF 463
Query: 663 IEEWC-EGVIQD 673
+ +C EG ++D
Sbjct: 464 VRSYCEEGRMED 475
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
PN +LL+ V+ D + +++ + QV L
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 24/377 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
I V G+C GD + ++ + + + + ++N++++ N ++ L ++ M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L++ C G A + ++ +E K + +V T+S ++ F
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSALIDAFVKEGK 341
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C PN N
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFV 497
L++ +A + D LFR +S+ + GNT + + H Q+ + V
Sbjct: 402 LIKGFCKAKRVDEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARECDNAQIV 453
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILI 555
S P TY+IL+ C + AL+ ++ + P+ ++ I+I
Sbjct: 454 FKQMVSD-----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G VE + + G+ P+VV YTT + R ++A +LF EMK
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 616 PNLVTYITLLRARSRYG 632
P+ TY TL+RA R G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 35/408 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 64 DAVNLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+IL+ C LA + ++ L + D+ T ++++ F
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLNSLLNGFCHGNRISD 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + M+ G P++ T+++LI+ +A+ L + M+ GC+P+ I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + N +++ + N
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGV-VIYNTIIDALCNY-----KNVNDALNL----- 278
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TYN L++ C +Y R L+++M ++PN ++++ LIDA
Sbjct: 279 FTEMDNK-GIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
VTY TL++ + V + + ++++M + G N LI +
Sbjct: 397 VTYNTLIKG---FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 155/365 (42%), Gaps = 35/365 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y I++ C G+ LA + +K +E +G ++ V Y+TI+ + K
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSL---LKKME-QGKIEPGVVIYNTIIDALCNYKN 271
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M + G+ PN +T++SLI N G A L +M++ PN +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + + S+ N F
Sbjct: 332 LIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN--GFCM 373
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHI 549
+ F P TYN L+K C RV L EM GL N +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTV 432
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LI + + A + K M DG+ PD++ Y+ + + +++ A +FE +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ +++P++ TY ++ + G +V+ ++ + G K N ++ +C
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 670 VIQDK 674
++++
Sbjct: 550 GLKEE 554
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 52/308 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS ++ F +AL V M+ G P+ +T +SL+N + + A+ L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M++ G +P+S N L+ LFR S+ VAL +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHG------------LFRHNRASEA-VAL----------VDR 211
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
M K Q P TY I++ C D +L+ +M
Sbjct: 212 MVVKGCQ------------------------PDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ P + + +IDA NV AL + M G+ P+VV Y + I+ R
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A L +M +I PN+VT+ L+ A + G L E ++ +Y +M K +
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK---LYDEMIKRSIDPDIFTY 364
Query: 660 KELIEEWC 667
LI +C
Sbjct: 365 SSLINGFC 372
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 61/330 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 379
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYT 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV P+ +T+S L++ N G VE A+ +FE + ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 530
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP TY +M C + AL EM+ G
Sbjct: 531 ----------------------GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMR 575
P+ ++ LI A G+ + ++++ MR
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 143/364 (39%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK +++ +M G+ NT+T+++LI+ A + A +F++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + A +F SK +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME----------------------- 498
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 499 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T ++ G E A + + M+E+G PD Y T I+ +R + L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 607 EEMK 610
EM+
Sbjct: 595 REMR 598
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P +V ++ + + + SL E+M++ I NL TY L+ R L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL---SLA 135
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LAV M K GY+ + L L+ +C G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 203/457 (44%), Gaps = 48/457 (10%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S+P++ T+I+ GD K+ + Y ++ + ++ ++ ++S++ + +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM + +YN +L C ++ +E G +K + + GV + DV TY+++
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYC---SSEQPKEAIGFLKKMRSDGV-EPDVVTYNSL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE------DYDGNTDRIS 480
P+ NIL+ A + + D A +F R L+ V G D +
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS-------FDKRFSFKP------------TTTTYNIL 521
E + + TPN + Y+S FDK + T +N +
Sbjct: 428 YFEQMIDEGL--TPNIIV---YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C + +++ L + M +G+ PN I+++ LID +G ++ A ++L M GM
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V Y T I R R+ A +LF+EM + PN++TY +L+ G H +
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ-----GLFHTRRT 597
Query: 640 CLA--VYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
A +Y + K+G + + ++ C+ + D+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 150/384 (39%), Gaps = 75/384 (19%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++E+L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 34 ARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ CC AG L G V K +++ T++ ++K K A+ +
Sbjct: 94 IGCCCRAGRLDLGFAALGNV----VKKGFRVEAITFTPLLKGLCADKRTSDAMDI----- 144
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ M + C P+ C ILL+ + +
Sbjct: 145 -----------------------------VLRRMTELSCMPDVFSCTILLKGLCDENRSQ 175
Query: 451 RAFRLFRSWT-----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
A L +S T V G +G++D+ + H+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE-------------- 221
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
D+R S P TY+ ++ A C KA+ + M G+ PN +++ ++
Sbjct: 222 ----MLDRRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
S + A+ LK MR DG+ PDVV Y + + ++ R +A +F+ M ++P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+ TY TLL+ + G+L E+ L
Sbjct: 336 IATYCTLLQGYATKGALVEMHALL 359
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 135/359 (37%), Gaps = 53/359 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M +L M D+ S ILLK C + A E+ + G DV +Y+T++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVI 203
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A +ML ++P+ +T+SS+I A +++AM + M++ G
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L + Q A + DG
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMR-----------SDG---------------- 296
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+P TYN LM C + +A + + M GL P+
Sbjct: 297 --------------------VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+ G + +L +M +G+ PD + I + +++ +A +F +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M+ + + PN+VTY ++ + GS V + ++ M G N LI C
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGS---VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ +I + G + +E
Sbjct: 375 NILIC----AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +T NI V+ SL+ H L E+ M G+ + +N ++ +
Sbjct: 431 QMIDEGLTPNIIVYTSLI----HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + +++++ L + +K +V TYST++ + A A K+ M S G+
Sbjct: 487 CKEGRVIESEKLF----DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+++LIN ++ A+ LF+EM+ +G PN NI+LQ + A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 455 LFRSWTLSKTQVAL 468
L+ T S TQ+ L
Sbjct: 603 LYVGITKSGTQLEL 616
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 108/216 (50%), Gaps = 6/216 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN+ + ++I I + K+ + ++ + + LN FNS+++ + + + + +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M ++GV ++ +Y+ L+ CLAG A ++ + + +K D TY+T++
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG----MKPDCVTYNTLI 553
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL + ++M+S+GV+PN IT++ ++ + A L+ + ++G +
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
NI+L + D A R+F++ L+ Q+
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + PN+ T+ID + G ++ +
Sbjct: 477 IFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSS 536
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S + + +N+L+N + L ++K M GV ++ +YNI+L+
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A+E+Y + K +L++ TY+ I+ AL++ +++ + T
Sbjct: 597 TAAAKELYVGI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652
Query: 400 TWSSLINACANAGLVEQAMHLFE-----------------------------------EM 424
T++ +I A G ++A LF M
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 712
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC NS+ N +++ ++ RA
Sbjct: 713 EENGCTANSRMLNSIVRKLLQRGDITRA 740
>gi|224080562|ref|XP_002306163.1| predicted protein [Populus trichocarpa]
gi|222849127|gb|EEE86674.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 16/306 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + N+ A E+ K + LK D Y+T++ A +
Sbjct: 42 LSTFNMLMSVCATSQNSAGAFEVLQLAKAVG----LKADCKLYTTLISTCAKSGKVDAMF 97
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V +M++AGV PN T+ +LI+ CA AG V +A + M +P+ N L+ AC
Sbjct: 98 EVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 157
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + T GE + D I+ ++ TN
Sbjct: 158 GQSGAVDRAFDVLAEMT--------GEAQPIDPDHIT--VGALIKACTNAGQVDRAQEVY 207
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ +++ K T Y I + +C D+ + ++M G+ P+ + + LID G +
Sbjct: 208 NMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHA 267
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A +I++ + G ++ Y++ + C +K ++ L+E++K +I+P + T
Sbjct: 268 GKMDAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATM 327
Query: 622 ITLLRA 627
L+ A
Sbjct: 328 NALITA 333
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 59/365 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 110 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDV 169
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + L+KAC AG AQE+Y V KG ++ Y+
Sbjct: 170 LAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEV----YTIA 225
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A KV +DM GV P+ + S+LI+ +AG ++ A + +E G
Sbjct: 226 INSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGA 285
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + + L+ ED
Sbjct: 286 QLGIIPYSSLMGACCNAKNWQKGLELY-------------EDI----------------- 315
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
K KPT T N L+ A C KAL ++EM+ GL PN
Sbjct: 316 -----------------KSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPN 358
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++IL A ++E L +L ++D ++P ++ I +C+R + + A +L E
Sbjct: 359 TITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLR--KFESACTLGE 416
Query: 608 EMKHY 612
+ +
Sbjct: 417 AVLSF 421
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT +T+N+LM C T A ++ + VGL + +T LI C SG V+ ++
Sbjct: 40 PTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEV 99
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V + L+ A +
Sbjct: 100 FHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 159
Query: 631 YGSLHEVQQCLA 642
G++ LA
Sbjct: 160 SGAVDRAFDVLA 171
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 125/344 (36%), Gaps = 89/344 (25%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T++ ++ V A ++ A +V + + G+ + +++LI+ CA +G V+ +F EM
Sbjct: 44 TFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEM 103
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ AG EPN L+ C A Q +AF +
Sbjct: 104 VNAGVEPNVHTYGALIDGCARAGQVAKAFGAY---------------------------- 135
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEM--R 540
I + N KP +N L+ AC R ++ EM
Sbjct: 136 ----GIMRSKNV---------------KPDRVVFNALITACGQSGAVDRAFDVLAEMTGE 176
Query: 541 TVGLSPNHISWTILIDACGGSG---------------NVEGALQILKI------------ 573
+ P+HI+ LI AC +G N++G ++ I
Sbjct: 177 AQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWE 236
Query: 574 --------MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M G+ PD + + I V + ++ AF + +E K Q ++ Y +L+
Sbjct: 237 FACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLM 296
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
A + Q+ L +Y+D+ K + LI C+G
Sbjct: 297 GACC---NAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDG 337
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S N GA ++L++ + G+ D YTT I C +S ++ F
Sbjct: 39 NPTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFE 98
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+F EM + ++PN+ TY L+ +R G +V + Y M K + LI
Sbjct: 99 VFHEMVNAGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIMRSKNVKPDRVVFNALI 154
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 203/457 (44%), Gaps = 48/457 (10%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S+P++ T+I+ GD K+ + Y ++ + ++ ++ ++S++ + +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM + +YN +L C ++ +E G +K + + GV + DV TY+++
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYC---SSEQPKEAIGFLKKMRSDGV-EPDVVTYNSL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE------DYDGNTDRIS 480
P+ NIL+ A + + D A +F R L+ V G D +
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS-------FDKRFSFKP------------TTTTYNIL 521
E + + TPN + Y+S FDK + T +N +
Sbjct: 428 YFEQMIDEGL--TPNIIV---YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C + +++ L + M +G+ PN I+++ LID +G ++ A ++L M GM
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V Y T I R R+ A +LF+EM + PN++TY +L+ G H +
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ-----GLFHTRRT 597
Query: 640 CLA--VYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
A +Y + K+G + + ++ C+ + D+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 135/359 (37%), Gaps = 53/359 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M +L M D+ S ILLK C + A E+ + G DV +Y+T++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVI 203
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A +ML ++P+ +T+SS+I A +++AM + M++ G
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L + Q A + DG
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMR-----------SDG---------------- 296
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+P TYN LM C + +A + + M GL P+
Sbjct: 297 --------------------VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+ G + +L +M +G+ PD + I + +++ +A +F +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M+ + + PN+VTY ++ + GS V + ++ M G N LI C
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGS---VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 153/377 (40%), Gaps = 61/377 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K +++ T++ ++K + AD + V M
Sbjct: 94 IGCCCRAGRLDLGFAALGNV----VKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
P+ + + L+ + ++A+ L M G P+
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPD-------------- 195
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+S T V G +G++D+ + H+ D
Sbjct: 196 -------------VVSYTTVINGFFKEGDSDKAYSTYHE------------------MLD 224
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R S P TY+ ++ A C KA+ + M G+ PN +++ ++ S
Sbjct: 225 RRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ LK MR DG+ PDVV Y + + ++ R +A +F+ M ++P++ TY TL
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342
Query: 625 LRARSRYGSLHEVQQCL 641
L+ + G+L E+ L
Sbjct: 343 LQGYATKGALVEMHALL 359
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 183/428 (42%), Gaps = 40/428 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ +I + G + +E
Sbjct: 375 NILIC----AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +T NI V+ SL+ H L E+ M G+ + +N ++ +
Sbjct: 431 QMIDEGLTPNIIVYTSLI----HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + +++++ L + +K +V TYST++ + A A K+ M S G+
Sbjct: 487 CKEGRVIESEKLF----DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+++LIN ++ A+ LF+EM+ +G PN NI+LQ + A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ T S TQ+ L Y+ + D +++ N +
Sbjct: 603 LYVGITKSGTQLEL-STYNIILHGLCKNNLTD-EALRMFQNLCLT----------DLQLE 650
Query: 515 TTTYNI----LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T T+NI L+K D K L + GL PN+ ++ ++ + G G +E Q+
Sbjct: 651 TRTFNIMIGALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRA 627
M ++G + D ++ ++ + +A S+ +E KH+ ++ + + L +
Sbjct: 709 FFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLS 767
Query: 628 RSRYGSLH 635
+Y H
Sbjct: 768 GGKYQEYH 775
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 173/399 (43%), Gaps = 59/399 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
+IDV G+ K++ + +++ + V N++ +N+L+N V D K E+ K M+K
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
V+ +A+Y+IL++ +G+ A++I+ E++ +++DV+ YS+++
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKN----IEMDVYVYSSMISWSRRLGN 337
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A + ++M + PN T+ +LI AG +E A L EM G + N N
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ + D A RL A+ E N D
Sbjct: 398 TMDGYCRRGKMDEALRL----------QAIMEKKGINAD--------------------- 426
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
TYNIL C Y K ++N M G+ PN +++T+ I+
Sbjct: 427 ----------------VFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIE 470
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN+ A ++ + M + G P+++ Y T I + +++KQA + EM + + P
Sbjct: 471 IYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLP 530
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+L TY +L+ G V + L ++ +M G N
Sbjct: 531 DLYTYSSLIHGECIVG---RVDEALKLFNEMRLKGITRN 566
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 162/371 (43%), Gaps = 61/371 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASY 327
GD ++ I+E++R +N+ +++YV++S+++ + ++K ++ M + ++ + +Y
Sbjct: 301 GDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTY 360
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ C AG A+ + E +++KGV L++ ++T + + AL+++
Sbjct: 361 GALIGGVCKAGQMEAAEILLLE---MQSKGV-DLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ + T++ L N ++A + M++ G +PN + ++ +
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEG 476
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A RLFR +ME K + VPN
Sbjct: 477 NLAEAERLFR-----------------------DMEKKGE---------VPN-------- 496
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
TYN L+ A C + + +EM GL P+ +++ LI G V+
Sbjct: 497 -------IITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVD 549
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ MR G++ +V YT+ I + R +AF L++EM + P+ + +L+
Sbjct: 550 EALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Query: 626 RARSRYGSLHE 636
GS H+
Sbjct: 610 ------GSFHK 614
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 55/345 (15%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
S +++ C G A+E+ E + KG++K +VFTY+T++ + K + ++
Sbjct: 218 SLTLVIDVLCRRGEVEKAKELMDE---MVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEI 274
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M V + T+S LI +++G +E+A +FEEM + E + + ++
Sbjct: 275 LKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRR 334
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
RAF LF M +D VPN+H
Sbjct: 335 LGNMKRAFALF-----------------------DEMSQRD---------IVPNAH---- 358
Query: 506 DKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TY L+ C + L+ EM++ G+ N + + +D G
Sbjct: 359 -----------TYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGK 407
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ AL++ IM + G++ DV Y + R +A + M ++PN+VT+
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + G+L E ++ +++DM K G N LI+ +C+
Sbjct: 468 FIEIYCKEGNLAEAER---LFRDMEKKGEVPNIITYNTLIDAYCK 509
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 45/256 (17%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D + PN + +I G+C G + + +++S+ V LN+ +FN+
Sbjct: 341 AFALFDEMSQRDIVPNAHTYGALIG--GVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398
Query: 298 MNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL------------------------- 330
M+ K L + M+K G+ AD+ +YNIL
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458
Query: 331 ----------LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ C GN A+ ++ + +E KG + ++ TY+T++ + + +
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLF---RDMEKKGEVP-NIITYNTLIDAYCKKEKVK 514
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A K+K +M++ G+ P+ T+SSLI+ G V++A+ LF EM G N ++
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574
Query: 441 QACVEACQFDRAFRLF 456
+ + D AF+L+
Sbjct: 575 SGLSKEGRADEAFKLY 590
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 241 LRAYDASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
L YD +K L+S PN+ I++ G+ ++ ++ D+ + NI
Sbjct: 440 LHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIIT 499
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ +K ++ M G++ D+ +Y+ L+ C+ G A +++ E++
Sbjct: 500 YNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMR 559
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
KG+ + +V TY++++ + A K+ ++M+ G+ P+ ++SL+ +
Sbjct: 560 ---LKGITR-NVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGS 611
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 176/392 (44%), Gaps = 31/392 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
+CG C G +++ A++E++ ++ V+ + N++M + K + + +M K +
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M D+ SYN L+ C GN A + E++ L ++ TY+T++ +
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN----LSFNIVTYNTLIDGLCRLGDLE 429
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
ALK+KEDM++ G+ P+ +T++ L+N G + A F+EML G P+ +
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489
Query: 441 QACVEACQFDRAFRLFRSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ +AF+L + L+K V + ++ N+E + +
Sbjct: 490 VGELKLGDTAKAFKL-QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGEL----LQKMI 544
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILI 555
+ H P TY M A + + + + +M + G +P +++T+LI
Sbjct: 545 RDGHV----------PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A +G ++ A+ M+E G+ P+V+ Y I + +++ QA F EM+ I
Sbjct: 595 HAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF 654
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
PN TY L+ G Q+ L +Y M
Sbjct: 655 PNKYTYTILINENCNMGKW---QEALRLYAQM 683
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/530 (22%), Positives = 222/530 (41%), Gaps = 82/530 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ G + + ++ K+ E G P E+ F +L N + GE++ GL++ + +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEV----TFNVLINGLSK---KGELQQAKGLIQEMAKA 301
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA--------DILFCNFVREFGKKRD 236
L V I C V + +V R + + F +E GK D
Sbjct: 302 GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKE-GKMSD 360
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVF 294
L D KK+L P++ T+I G C G+ ++ + ++LR +N++ NI +
Sbjct: 361 ARQQLS--DMLKKNLM-PDIISYNTLI--YGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L++ DL+ L++ ++M G+ D+ +Y +L+ C GN ++A+E + E+ H
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMA--LKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L D F Y+ ++ + K A K++E+ML+ G P+ IT++ +N
Sbjct: 476 VG----LAPDQFAYTA--RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+A L ++M++ G P+ + A +E +F LS+ Q
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD-MLSRGQT---- 584
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
PT TY +L+ A +
Sbjct: 585 ------------------------------------------PTVVTYTVLIHAHALNGR 602
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A EM+ G+ PN I++ +LI+ ++ A + M+E G+ P+ YT
Sbjct: 603 LDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I + ++A L+ +M +I+P+ T+ LL+ + + VQ
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQ 712
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 166/407 (40%), Gaps = 33/407 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C I+ + +K+ +Y + + + +N++++ +++ L++
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
MQ+ G ++N+L+ G A+ + E+ AK L++ +TY+ ++
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM----AKAGLRVSPYTYNPLIC 315
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + E+M++ GV+P + ++++ G + A +ML+ P
Sbjct: 316 GYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMP 375
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH--KD 486
+ N L+ AF L R LS V DG R+ ++E K
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC-RLGDLETALKL 434
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K+ + N P TY +L+ C + K +EM VGL
Sbjct: 435 KEDMINR----------------GIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ ++T I G+ A ++ + M G PDV+ Y + + L++A
Sbjct: 479 APDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGE 538
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L ++M P+ VTY + + A G L E ++ ++ DM G
Sbjct: 539 LLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE---IFYDMLSRG 582
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 142/349 (40%), Gaps = 56/349 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LEVY+ M + G+ + +YN +L + C G A ++ V ++ +G +V T++
Sbjct: 222 LEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL---VPKMQERGCYPSEV-TFNV 277
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + Q A + ++M AG+ + T++ LI GL+ +A+ L+EEM+ G
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P N ++ + + A ++S+M K+
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDA-----------------------RQQLSDMLKKN-- 372
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
P +YN L+ C + L++E+R LS
Sbjct: 373 ----------------------LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSF 410
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ LID G++E AL++ + M G+ PDVV YT + + + A F
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+EM H + P+ Y + + G + + + ++M G+ +
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLG---DTAKAFKLQEEMLTKGFPPD 516
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 122/309 (39%), Gaps = 52/309 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + I+K+ D AL+V M G+ P T+++++++ G V++A+ L
Sbjct: 201 DVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLV 260
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M + GC P+ N+L+ + + +A L + + +V
Sbjct: 261 PKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRV--------------- 305
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ TYN L+ C V+AL EM
Sbjct: 306 --------------------------------SPYTYNPLICGYCKKGLLVEALALWEEM 333
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
T G+SP S ++ G + A Q L M + + PD+++Y T I R +
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+AF L +E++ + N+VTY TL+ R G L + L + +DM G +
Sbjct: 394 GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL---ETALKLKEDMINRGIHPDVVTY 450
Query: 660 KELIEEWCE 668
L+ C+
Sbjct: 451 TVLVNGACK 459
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H L+ E++ +M G + +Y +L+ A L G A + E ++ KGV+
Sbjct: 565 NGH-LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE---MQEKGVVP 620
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ F + A K +M G+ PN T++ LIN N G ++A+ L
Sbjct: 621 -NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRL 679
Query: 421 FEEMLQAGCEPNSQCCNILLQAC-----VEACQF 449
+ +ML P+S LL+ V+A QF
Sbjct: 680 YAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQF 713
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 160/381 (41%), Gaps = 57/381 (14%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
IY +N L++ H + L V+ + + G+ D+ SYN L+ G A E++
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF- 180
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
K +E + DV TY++++ K + +V E M+ AG+ PN T++SLI
Sbjct: 181 -YKMIEQS--VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ AG+ ++++ +F+EM +G P CN + A + A +F S L
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP---- 293
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
KP +Y+ L+ +
Sbjct: 294 -------------------------------------------KPNIISYSTLLHGYAAE 310
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + +L+N M + G+ PNH + ILI+A G ++ A+ I + M+ GM PD V +
Sbjct: 311 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 370
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VY 644
T I R RL A F M + P+ Y L++ +G L + ++ ++ +
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN 430
Query: 645 QDMWKAGYKANDTYLKELIEE 665
+D+ G K + + L +E
Sbjct: 431 KDIPPPGVKYFSSIINNLFKE 451
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 187/476 (39%), Gaps = 53/476 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P++ T+ID G+ K+ ++ + Q+V+ ++ +NSL++ ++ +
Sbjct: 154 GPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSER 213
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G+ + +YN L+ AG + +E K + + G++ V ++ +
Sbjct: 214 VLEQMVDAGIRPNNKTYNSLIYGYSTAG---MWKESVRVFKEMSSSGLIPC-VVNCNSFI 269
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A + + M+ G PN I++S+L++ A G L M+ G
Sbjct: 270 HALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIV 329
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHK 485
PN + NIL+ A D+A +F + A R+ + HK
Sbjct: 330 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+ P+ Y L++ CC VKA L++EM
Sbjct: 390 FNHMVD-----------------IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432
Query: 544 LSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P + + + +I+ G V I+ +M + G P+VV + + ++ +++A
Sbjct: 433 IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 492
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND------ 656
F+L + M I+PN Y TL+ + G + L V++DM G K
Sbjct: 493 FALLDAMASIGIEPNCYIYGTLVDGYCKNG---RIDDALTVFRDMLHKGVKPTSVLYNII 549
Query: 657 ----------TYLKELIEEWCEGVIQDKNQNQGEV--TLCRRTNSQRPQSLLLEKV 700
T K++ E E Q G V LC R N ++LLEK+
Sbjct: 550 LHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC-RNNCTDEANMLLEKL 604
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 184/456 (40%), Gaps = 66/456 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVT 288
F K+ ++ A + + SP++ ++ID G+C + +KS + E + +
Sbjct: 167 FSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLID--GLCKTKEMVKSERVLEQMVDAGIR 224
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N +NSL+ A K ++ V+K M G++ + + N + A C A++I
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284
Query: 347 YGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKVFA 374
+ V + +KG++ F ++ ++ +A
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF-FNILINAYA 343
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A+ + EDM + G+ P+T+T++++I++ G ++ A+H F M+ G P+
Sbjct: 344 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEA 403
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-------EHKDK 487
L+Q C + +A L S ++K G Y + I+N+ E KD
Sbjct: 404 VYRCLIQGCCNHGELVKAKELI-SEMMNKDIPPPGVKYFSSI--INNLFKEGRVAEGKDI 460
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ + +P T+N LM+ C + AL++ M ++G+
Sbjct: 461 MDLM---------------VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 505
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + L+D +G ++ AL + + M G+ P V Y + +++R A +
Sbjct: 506 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKM 565
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F EM ++ TY +L R E L
Sbjct: 566 FHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLL 601
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
PT TYNIL+ C +R + A+ + GL P+ S+ LID G V+ A +
Sbjct: 120 PTIYTYNILID-CYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E +SPDVV Y + I ++K + ++ + E+M I+PN TY +L+ S
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G E + V+++M +G
Sbjct: 239 TAGMWKE---SVRVFKEMSSSG 257
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ ILID E AL + + G+ PDV +Y T I + + +A+
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF +M + P++VTY +L+ + + + ++ L + M AG + N+ LI
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL---EQMVDAGIRPNNKTYNSLIY 235
Query: 665 EW 666
+
Sbjct: 236 GY 237
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/232 (17%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++++ + G+ ++ A+ + + S + N Y++ +L++ + + L V
Sbjct: 471 PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 530
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY------GEVKHLEAKGVL------ 359
+++M GV YNI+L A T A++++ G ++ GV+
Sbjct: 531 FRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR 590
Query: 360 -------------------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K D+ T++ ++ Q A ++ + + G+ P T
Sbjct: 591 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT 650
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
++ +I+ E+A +LF + ++G P+S+ N +++ ++ + +A
Sbjct: 651 YNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 702
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
DLV+ + Y S HL P+ + ++ D+ + + +++ + V +N +V+N
Sbjct: 90 DLVNIVFDYMGSDGHL--PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYN 147
Query: 296 SLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+L++V H+ + + Y MQ D ++NIL++ C G A E++
Sbjct: 148 NLLSVLVKQNQVHEAIYLFKEYLVMQS---PPDTWTFNILIRGLCRVGGVDRAFEVF--- 201
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-KEDMLSAGVTPNTITWSSLINACA 409
K +E+ G L DV TY+T++ A Q ++ KE + +P+ +T++S+I+
Sbjct: 202 KDMESFGCLP-DVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFC 260
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS---WTLSKTQV 466
+G +++A +LFEEM+++G +PN N+L+ + A ++R + S V
Sbjct: 261 KSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVV 320
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
DG R + H K + + K + PT TY +L+ A C
Sbjct: 321 TFTSLIDGYC-RAGQVNHGLK--------------FWNVMKTRNVSPTVYTYAVLINALC 365
Query: 527 TD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + + +++ + P + +ID +GNV+ ILK M E PD V
Sbjct: 366 KENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425
Query: 585 AYTT-AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+T I CV+ R+ +A ++F M + P+ +T +L+ + G +E
Sbjct: 426 TFTILIIGHCVKG-RMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNE 477
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 145/383 (37%), Gaps = 74/383 (19%)
Query: 325 ASYNILLKACCLAGNTVLAQEIY---GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++YN+L+++ C G+ L ++ G HL +L +V A A + M
Sbjct: 74 STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGF-------LVTWMAQASDFDM 126
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
K+ ++ V N+ +++L++ V +A++LF+E L P++ NIL++
Sbjct: 127 VKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIR 186
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
DRAF +F KD +S P+ V +
Sbjct: 187 GLCRVGGVDRAFEVF----------------------------KDMESFGCLPDVVTYNT 218
Query: 502 -----------------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ R P TY ++ C +A L EM
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN I++ +LID G GN+ A + + M S DVV +T+ I R+ ++
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHG 338
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA----------------VYQD 646
+ MK + P + TY L+ A + L+E + L V
Sbjct: 339 LKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDG 398
Query: 647 MWKAG-YKANDTYLKELIEEWCE 668
KAG + LKE+ E+ C+
Sbjct: 399 FCKAGNVDEGNVILKEMEEKRCD 421
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + F K + A ++ + PN+ +ID G G+ ++ A+Y
Sbjct: 250 VTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRK 309
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + ++ F SL++ A + L+ + M+ V + +Y +L+ A C
Sbjct: 310 MAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENR 369
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++ G++K+ + F Y+ ++ F A + ++M P+ +
Sbjct: 370 LNEARDFLGQIKN----SSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI G + +A+++F ML C P++ N L+ ++A + A+R+ R
Sbjct: 426 TFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI-RKM 484
Query: 460 TLSKTQVAL 468
L + L
Sbjct: 485 ALEDRNLGL 493
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 164/414 (39%), Gaps = 59/414 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V + +N +++V + + M+
Sbjct: 178 TVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 237
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ ACC G L E + L+A+G V TY+ +++VF A
Sbjct: 238 AGVEPDDFTASTVIAACCRDG---LVDEAVAFFEDLKARGHTPC-VVTYNALLQVFGKAG 293
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 294 NYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYN 353
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF D++
Sbjct: 354 TVMTAYGNIGKVDEALALF--------------------DQM------------------ 375
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ P TYN + M + + + ++ EM G +PN ++W ++
Sbjct: 376 ---------KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 426
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L+ M+ G+ Y T I R AF ++ EM
Sbjct: 427 AVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFA 486
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
P L TY LL SR G Q ++ M G+K ND L++ + +G
Sbjct: 487 PCLTTYNALLNVLSRQGDWSTAQ---SIVSKMRTKGFKPNDQSYSLLLQCYAKG 537
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 192/422 (45%), Gaps = 36/422 (8%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-- 304
++ +P + ++DV G G + + A+ +++R+ V + + ++++ D
Sbjct: 200 RRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGL 259
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + +++++ G + +YN LL+ AGN A + +K +E G + D
Sbjct: 260 VDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV---LKEMEQDGC-QPDAV 315
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ + +A A +++ A K + M S G+ PN T+++++ A N G V++A+ LF++M
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVAL-----GE 470
++GC PN N +L + +F + + S T +A+ E
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 435
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYN 519
DY T + M+ + +T N + ++ + +FK P TTYN
Sbjct: 436 DY--VTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYN 493
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ D+ ++++++MRT G PN S+++L+ GN+ G I K +
Sbjct: 494 ALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGG 553
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ P V T + + +RL F+E+K P+LV + ++L ++ G +V
Sbjct: 554 TVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKV 613
Query: 638 QQ 639
+
Sbjct: 614 TE 615
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 185/428 (43%), Gaps = 41/428 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G G ++ A+++ ++ N+ +N ++ + +FT LE+
Sbjct: 347 PNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N +L C G + + ++ +++ GV +L TY+T++
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMKSCGV-ELSRDTYNTLIA 462
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M SAG P T+++L+N + G A + +M G +P
Sbjct: 463 AYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKP 522
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N Q ++LLQ A ++A + + +F SW + +T V I+N
Sbjct: 523 NDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLV------------IANF 570
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + I V K + P +N ++ + Y +V + + ++
Sbjct: 571 KCRRLGGIEKAFQEV---------KARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIK 621
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ I++ L+D A +IL ++ + PDVV+Y T I + +K
Sbjct: 622 QSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIK 681
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + EM + P +VTY TL+ Y SL + V M + K + +
Sbjct: 682 EAQRILSEMIADGMAPCVVTYHTLVGG---YASLEMFSEAREVINYMIQHNLKPMELTYR 738
Query: 661 ELIEEWCE 668
+++ +C+
Sbjct: 739 RVVDSYCK 746
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/575 (21%), Positives = 239/575 (41%), Gaps = 100/575 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R GR + V + +L GVAP + + ++ + R+ S + ++ +L+E
Sbjct: 185 RAGRYERAVELFAELRRQGVAPTLVT----YNVVLDVYGRMGRS-----WPRIVALLDEM 235
Query: 185 RLPVKELDE--EFRIVQLCVNKPDVNLAIRY----------ACIVPRADILFCNFVREFG 232
R E D+ ++ C V+ A+ + C+V + ++ FG
Sbjct: 236 RAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVV-----TYNALLQVFG 290
Query: 233 KKRDLVSALRA----------------------------YDASKKHLSS-------PNMY 257
K + ALR Y+ + K L + PN +
Sbjct: 291 KAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAF 350
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
T++ G G ++ A+++ ++ N+ +N ++ + +FT LE+ M
Sbjct: 351 TYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEM 410
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G + ++N +L C G + + ++ +++ GV +L TY+T++ +
Sbjct: 411 SRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMKSCGV-ELSRDTYNTLIAAYGR 466
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A K+ +M SAG P T+++L+N + G A + +M G +PN Q
Sbjct: 467 CGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQS 526
Query: 436 CNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-- 484
++LLQ A ++A + + +F SW + +T V + R+ +E
Sbjct: 527 YSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIA----NFKCRRLGGIEKAF 582
Query: 485 KDKQSITNTPNFV----------PNSHYSS----FD--KRFSFKPTTTTYNILMK--ACC 526
++ ++ P+ V N YS FD K+ P TYN LM A C
Sbjct: 583 QEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKC 642
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
++ + + ++N++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV Y
Sbjct: 643 SESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 702
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
T + + +A + M + ++P +TY
Sbjct: 703 HTLVGGYASLEMFSEAREVINYMIQHNLKPMELTY 737
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L +A+ K +P++ I +++ + G Y K I++ ++ ++ ++
Sbjct: 571 KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNILLKACCLAGNTVLAQEIYGE 349
+NSLM++ A + E K + +L V D+ SYN ++ C G AQ I E
Sbjct: 631 TYNSLMDMYAK-CSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSE 689
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ A G+ V TY T+V +A + + A +V M+ + P +T+ ++++
Sbjct: 690 ---MIADGMAPC-VVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYC 745
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
A E+A E+ + + + + L A +E QF R
Sbjct: 746 KAKRFEEARSFLSEVSETDPNFDKKVLHT-LAAYIEDAQFGR 786
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 142 MVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRR 201
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
+ P LVTY +L R G + +A+ +M AG + +D +I C +
Sbjct: 202 QGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGL 259
Query: 672 QDK 674
D+
Sbjct: 260 VDE 262
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 182/432 (42%), Gaps = 49/432 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ C ++ + S +++ + VT ++Y+F++++N + +E+
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K+GV ++ +YN ++ C G E + + +E + V K + TY ++
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRL---DEAFQFKEKMEKERV-KPSLVTYGVLIN 275
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A + ++M G PN + +++LI+ G + A+ + ++M+ G P
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISP 335
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
NS CN L+Q ++ Q + A L E +
Sbjct: 336 NSVTCNSLIQGYCKSNQMEHAEHLLE-------------------------EMLTGGGVI 370
Query: 492 NTPNFVPNSHYSSFDKRF-------------SFKPTTTTYNILMKACCTDYYRVKALMNE 538
N F H RF +FKP +L+ C + + +A+
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELW 430
Query: 539 MRTV--GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
R + G + N ++ LI +G+ E A ++LK M E G+ D ++Y T I C +
Sbjct: 431 YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++++ F L EEM IQP++ TY LL G + E ++ + K G +
Sbjct: 491 GKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG---GLWHECKKNGNFPDA 547
Query: 657 TYLKELIEEWCE 668
+I+ +C+
Sbjct: 548 YTYGIMIDGYCK 559
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 200/468 (42%), Gaps = 44/468 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--I 278
++++ + + + ++ +AL+ D + SPN C ++I G C A +
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ--GYCKSNQMEHAEHL 359
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL--GVMADMASYNILLKACCL 336
E++ + +N F S+++ +F + M+ L + +L+ C
Sbjct: 360 LEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ 419
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ L KG + T + ++ +A + A K+ ++ML G+
Sbjct: 420 NGKQSEAIELW---YRLLEKG-FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++I++++LI AC G VE+ L EEM++ G +P+ N+LL + + A L
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGL- 534
Query: 457 RSWTLSKTQVALGEDY------DG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
W K + Y DG +R+ E ++ +T
Sbjct: 535 --WHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT----------------- 575
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ Y L++A C + +A L ++MR+ G+ +++ LI G V+
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDS 635
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q+L MR++G+SP+VV YT I + ++ + S+ +EM + PN +TY ++
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ G++ + L +M + G + L +C EG +++
Sbjct: 696 GHCKLGNMKAAAKLL---NEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 154/364 (42%), Gaps = 29/364 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ + + G A+ + N L+ C AG+ A ++ +K + +G++ LD +Y+T
Sbjct: 427 IELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL---LKEMLERGLV-LDSISYNT 482
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + K+KE+M+ G+ P+ T++ L++ N G +E+A L+ E + G
Sbjct: 483 LILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALG---EDYDGNTDRISNM 482
P++ I++ +A + + +LF+ K + V G Y N +
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
+D P ++ YSS S + N L++EMR
Sbjct: 603 RLRDDMRSRGIPQ--TSATYSSLIHGLSNIGLVDSAN--------------QLLDEMRKE 646
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GLSPN + +T LI G + IL+ M + + P+ + YT I + +K A
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAA 706
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L EM I P+ VTY L + G + E L V M G +D L
Sbjct: 707 AKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA---LKVCDLMSTGGISLDDITYTTL 763
Query: 663 IEEW 666
I+ W
Sbjct: 764 IDGW 767
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 28/370 (7%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G+C + +S AI + L + N N+L++ A + ++ K M + G+
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D SYN L+ ACC G +E + + + +G+ + D++TY+ ++ + +
Sbjct: 474 VLDSISYNTLILACCKEGK---VEEGFKLKEEMVRRGI-QPDMYTYNMLLHGLCNMGKIE 529
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + + G P+ T+ +I+ A VE+ LF+EM+ E N+ L+
Sbjct: 530 EAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589
Query: 441 QACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+A E AFRL RS + +T Y +SN+ + ++ N +
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGIPQTSAT----YSSLIHGLSNI------GLVDSANQL 639
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+ ++ P Y L+ C ++V +++ EM + PN I++TI+I
Sbjct: 640 LDEM-----RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ GN++ A ++L M + G+ PD V Y + ++++A + + M I
Sbjct: 695 NGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGIS 754
Query: 616 PNLVTYITLL 625
+ +TY TL+
Sbjct: 755 LDDITYTTLI 764
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ + L+ + + V+ + Q+ IM G++PDV ++T + R+ A
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
LF +M+ + PN+VTY ++ + G L E Q
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ 253
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 16/173 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
+P+ + + + + SA + D +K SPN+ +C T + + G C G K
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV-VCYTAL-IGGYCKLGQMHK 670
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLK 332
+I +++ NV N + ++N + ++K ++ M + G++ D +YN L
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
C G A +V L + G + LD TY+T++ W L V
Sbjct: 731 GFCKEGKMEEAL----KVCDLMSTGGISLDDITYTTLI------DGWHKPLTV 773
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ + +++R + ++ N+ + +L+ + + + M V + +Y I++
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++ E+ KG++ D TY+ + F + ALKV + M +
Sbjct: 696 GHCKLGNMKAAAKLLNEMAQ---KGIVP-DAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751
Query: 393 GVTPNTITWSSLINA 407
G++ + IT+++LI+
Sbjct: 752 GISLDDITYTTLIDG 766
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 36/318 (11%)
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ SY+ + C G A EI+ + +E KG D FTY+ ++ +M
Sbjct: 89 TDVISYSRKINGLCKKGQIAEAMEIF---REMEEKGSAP-DSFTYNILINGLCKDAQLEM 144
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ + ++M + G +P +T+++LI+ AG V+ AM + +EM G PN+ L+Q
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204
Query: 442 ACVEACQFDRAFRLFRSWTL----------SKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + +RA + + L + TQ+ G G + ME D+ I+
Sbjct: 205 GLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEM--GMEFLDEMIIS 262
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
P TY L+ C + L+NEM +G + +
Sbjct: 263 GC------------------FPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LID G ++ A ++ +M E G++PDV YT+ I+ + L +A L +EM
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Query: 610 KHYQIQPNLVTYITLLRA 627
+ I PN VTY TL+
Sbjct: 365 RAKGIVPNSVTYTTLING 382
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 166/405 (40%), Gaps = 65/405 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R + S+LR Y K L+S + + + G+C G ++ I+ ++ + +
Sbjct: 68 RRRGIPSSLRIY--RPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPD 125
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N L+N D L+ + + MQ G + +Y L+ C AG A +I
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLIN 406
E++H +G+ + TY+ +++ D + A+ V ++M G PN +T++ LI+
Sbjct: 186 EMEH---RGITP-NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
GL E M +EM+ +GC PN+ L+ + F + L V
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSF------LEAAVLLNEMV 295
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
A+G + D YN L+ C
Sbjct: 296 AIGCELD-----------------------------------------VVIYNSLIDGLC 314
Query: 527 T----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
D+ R ++ M G++P+ ++T LI +G ++ AL +++ MR G+ P+
Sbjct: 315 KMGELDFAREMQIL--MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPN 372
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YTT I ++ R A L EMK + P Y L ++
Sbjct: 373 SVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKS 417
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 104/277 (37%), Gaps = 56/277 (20%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ I++S IN G + +AM +F EM + G P+S NIL+ + Q + L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL- 148
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ M+ + F PT
Sbjct: 149 ----------------------MDEMQAR------------------------GFSPTVV 162
Query: 517 TYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+ CT RV A M+ EM G++PN +++T LI G VE A+ +LK
Sbjct: 163 TYTTLIHGFCT-AGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKE 221
Query: 574 MREDGMS--PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ G P+VV YT I + + +EM PN TY L+ +
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
GS E + +M G + + LI+ C+
Sbjct: 282 GSFLEAA---VLLNEMVAIGCELDVVIYNSLIDGLCK 315
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 8/238 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F + +A+ D + +PN +I CG+ ++ + ++
Sbjct: 162 VTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKE 221
Query: 282 --LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
LR N+ + L++ + +E M G + A+Y L+ C
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ + A + E+ + + LDV Y++++ A +++ M+ GV P+
Sbjct: 282 GSFLEAAVLLNEMVAIGCE----LDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T++SLI +AGL+++A+ L +EM G PNS L+ +A + D A +L
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQL 395
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 152/299 (50%), Gaps = 17/299 (5%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K + TY++++ A A W A+ + +DM A + P+ T++++INAC AG ++A+
Sbjct: 185 KPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALE 244
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F + ++VA +T +
Sbjct: 245 LCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFE--IMKSSKVA------PDTCTM 296
Query: 480 SNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALM 536
+ + H K + + NS ++R + P TY +M + C KA+
Sbjct: 297 NIVIHCLVKIGLYGEAIELFNSMR---ERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVF 353
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G+ PN +S+ L+ A G AL+ K+++++G+ PD+V+YT+ + RS
Sbjct: 354 DIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRS 413
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ ++A +F EM+ +PN V+Y L+ A YGS +++ +++ +M + G + +
Sbjct: 414 AQPEKAREVFNEMRKNACKPNKVSYNALIDA---YGSAGMLKEAISLLHEMEQDGIQPD 469
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 175/404 (43%), Gaps = 31/404 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ N +NSL++ +A ++ + + +MQ+ + +YN ++
Sbjct: 171 QARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVI 230
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ F + + A+ E M S
Sbjct: 231 NACGAAGNWKKALEL---CKKMTENGV-GPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNSQCCNILLQA---CVEA 446
+ V P+T T + +I+ GL +A+ LF M + C P+ ++ + C +A
Sbjct: 287 SKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQA 346
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
F + + + V+ N + H T +
Sbjct: 347 ENCKAVFDIMVAEGVRPNIVSY------NALLGAYASHGMHTEALETFKLL--------- 391
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K+ +P +Y L+ A KA + NEMR PN +S+ LIDA G +G +
Sbjct: 392 KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGML 451
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ +L M +DG+ PDV++ +T + C R K+L + + K IQ N V Y +
Sbjct: 452 KEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSG 511
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ Y SL + ++ L +Y M K + LI C+
Sbjct: 512 I---GSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCK 552
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 18/333 (5%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M GV ++ SYN LL A G A E + K L+ G L+ D+ +Y++++
Sbjct: 352 VFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETF---KLLKQNG-LRPDIVSYTSLL 407
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + A +V +M PN +++++LI+A +AG++++A+ L EM Q G +
Sbjct: 408 NAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQ 467
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + LL AC Q + + + Q+ G +S ++K +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
Y+S + + KP TYNIL+ C V++L +M + +
Sbjct: 528 -----------YTSM-RAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK 575
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +I + G + A M+E G PDV+ YTT IK ++A+ LF+E
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M++ QP+ + +L+ A ++ G V Q +
Sbjct: 636 MENNGTQPDAIVCSSLMEALNKGGQPERVLQLI 668
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 172/412 (41%), Gaps = 56/412 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ D ++ P+ +I+ CG G++ K+ + + + V ++ N +++
Sbjct: 207 AINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLS 266
Query: 300 VNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ +++ + ++ M+ V D + NI++ G A E++ ++ E +
Sbjct: 267 AFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMR--ERRT 324
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
DV TY++I+ ++ + V + M++ GV PN +++++L+ A A+ G+ +A
Sbjct: 325 TCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEA 384
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ F+ + Q G P+ LL A + Q ++A +F
Sbjct: 385 LETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM------------------ 426
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--L 535
++ + KP +YN L+ A + +A L
Sbjct: 427 -----------------------------RKNACKPNKVSYNALIDAYGSAGMLKEAISL 457
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM G+ P+ IS + L+ ACG + IL + G+ + VAY + I +
Sbjct: 458 LHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLS 517
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
K+A L+ M+ ++P+ VTY L+ + G E L ++DM
Sbjct: 518 LGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVE---SLKFFEDM 566
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 147/379 (38%), Gaps = 78/379 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K I +S+ + LN +NS + ++ D K L +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEV------ 350
Y +M+ V D +YNIL+ C G N L +E+Y V
Sbjct: 528 YTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVK 587
Query: 351 --KHLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K EA DV TY+T++K ++D W+ A + ++M + G P+ I
Sbjct: 588 QGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIV 647
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
SSL+ A G E+ + L E M Q + N + ++ +C + R W
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCT----------MLRDW- 696
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
KT + E D + IS + + + +F
Sbjct: 697 --KTASQIIEHLDSSLSSIS---------------------FGTLNHILNFLGKCGRTES 733
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+MK +Y+ ++ TVGLS ++TIL+ G +++L+ M + G+
Sbjct: 734 MMKL----FYK---MVTSCSTVGLS----TYTILLRNLLIVGKWRKYVEVLQWMEDAGVC 782
Query: 581 PDVVAYTTAIKVCVRSKRL 599
P + Y + + R +
Sbjct: 783 PTLYMYQSVLPYIWRDNSM 801
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+LI SG+++ A+ + + M+ ++ Y I++ R ++ QA LF EM+
Sbjct: 122 LLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQE 181
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKANDTYLKELI 663
++ +PN TY +L+ A +R G Q C A + DM +A + T +I
Sbjct: 182 WRCKPNTDTYNSLIHAHARAG-----QWCWAINIMDDMQRAAIPPSRTTYNNVI 230
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 66/356 (18%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLK 306
+P++Y +I G+C G +R ++E + + + N VF L ++AH D +
Sbjct: 307 TPDVYTYGALIQ--GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL--IDAHCKKGDAE 362
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LE+++ M++ GV D +YN ++ C A + A I E++ L+ D TY
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR----SAGLRPDTVTY 418
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + MA+++K++M++ GV + +T+++LI+ + AG A + EM++
Sbjct: 419 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG EP++ +++ A RL + M++K
Sbjct: 479 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-----------------------EMQNKG 515
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ KP TYN++M C L+N M +G+
Sbjct: 516 R------------------------KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 551
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
SP+ I++ IL+D G V I ++ G PD+ YT+ + V+ K K
Sbjct: 552 SPDDITYNILLDGHCKHGKVT---DIEELKSAKGTVPDLGVYTSIVGEIVKKKTTK 604
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 24/369 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L + +FN LM V +L V+ MQ GV + S+N ++
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG+ A+ ++ + + GV DV+TY +++ + A V E M G+
Sbjct: 286 CRAGDLDGAETLH---RRMSEAGVTP-DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 341
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN + ++ LI+A G E + L EM + G P++ N ++ A A
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401
Query: 455 L---FRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ RS L V DG + +M + KQ++ + Y++ S
Sbjct: 402 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 461
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ D RV + EM GL P++ ++T++IDA G+V+ L++
Sbjct: 462 KAGRS-----------ADAERV---LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 507
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
LK M+ G P VV Y + + ++K A L M + + P+ +TY LL +
Sbjct: 508 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 567
Query: 631 YGSLHEVQQ 639
+G + ++++
Sbjct: 568 HGKVTDIEE 576
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 149/368 (40%), Gaps = 57/368 (15%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y + G+ + +N+L++ G AQ ++ E ++++GV + V +++T++
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDE---MQSRGVRR-TVVSFNTMIS 283
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + M AGVTP+ T+ +LI G +E A +FE+M G +P
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL+ A + + L R
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREM-------------------------------- 371
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +P TYN ++ C D ++ EMR+ GL P+ +
Sbjct: 372 ---------------RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID ++ A++I + M +G+ D V YT I ++ R A + EM
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++P+ TY ++ A R G +V+ L + ++M G K ++ +C+
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCK- 532
Query: 670 VIQDKNQN 677
+ Q KN +
Sbjct: 533 LGQMKNAD 540
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 29/256 (11%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDY 472
+A + ++L AG P ++ N+L++ V + A +F +S + +T V+
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACC--T 527
G R +++ + + +R S P TY L++ C
Sbjct: 283 SGMC-RAGDLDGAE-----------------TLHRRMSEAGVTPDVYTYGALIQGLCRVG 324
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +M G+ PN + +TILIDA G+ E L++ + MRE G+ PD V Y
Sbjct: 325 RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYN 384
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R++ LK A + EM+ ++P+ VTY TL+ Y E+ + + Q+M
Sbjct: 385 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG---YCKEEELDMAMEIKQNM 441
Query: 648 WKAGYKANDTYLKELI 663
G ++ LI
Sbjct: 442 VAEGVGLDEVTYTALI 457
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +ID GD ++ ++R + V + +N+++N A DLK +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ D +Y L+ C +A EI +++ A+GV LD TY+ ++
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK---QNMVAEGV-GLDEVTYTALIS 458
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A A +V +M+ AG+ P+ T++ +I+A G V+ + L +EM G +P
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+++ + Q A L + +S + DG+ + + D +
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHC---KHGKVTDIE 575
Query: 489 SITNTPNFVPN-SHYSSFDKRFSFKPTTTTYN 519
+ + VP+ Y+S K TT TY+
Sbjct: 576 ELKSAKGTVPDLGVYTSIVGEIVKKKTTKTYH 607
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 38/312 (12%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+L AG+ P ++ L+ G + A ++F+EM G N ++ A
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 290
Query: 449 FDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
D A L R + ++ G G R+ +E D + + F
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLC-RVGRIE--DARGV--------------F 333
Query: 506 DKRFS--FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+K KP + IL+ A C D + L EMR G+ P+ +++ +++ +
Sbjct: 334 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+++ A I+ MR G+ PD V YTT I + + L A + + M + + VTY
Sbjct: 394 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 453
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE------GV----- 670
L+ S+ G + ++ L +M +AG + ++T +I+ +C G+
Sbjct: 454 TALISGLSKAGRSADAERVLG---EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKE 510
Query: 671 IQDKNQNQGEVT 682
+Q+K + G VT
Sbjct: 511 MQNKGRKPGVVT 522
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 44/429 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y ++S ++ ++ + L++ F L + +M +L + ++NI+L+ C A
Sbjct: 110 LYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIMLRHLCSA 167
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTP 396
G A E+ ++ A TY+T++ F Q AL + +M G+ P
Sbjct: 168 GKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRL 455
N T+ ++I+ G V++A+ +F+EML G +P + N L+ + + D A L
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-L 278
Query: 456 FRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNFVPNSH- 501
+R + + Y DG + + M K T N + N H
Sbjct: 279 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHC 338
Query: 502 -----------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
+ + +R + T TY L+ A L +E G+ P+
Sbjct: 339 KEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A L +E
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M IQP+LVTY TL+ S G +V+ L + +M G+ LI+ C+
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514
Query: 669 GVIQDKNQN 677
D +N
Sbjct: 515 NGQGDDAEN 523
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 56/378 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 218 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 277
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L LDVFTY+ +
Sbjct: 278 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LALDVFTYNIL 333
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T++SLI A + G V++ LF+E ++ G
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 426
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 427 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 466
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 467 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 526
Query: 608 EMKHYQIQPNLVTYITLL 625
EM I P+ TYI+L+
Sbjct: 527 EMVENGITPDDSTYISLI 544
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 186/432 (43%), Gaps = 39/432 (9%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAH 303
+ H PN+ ++ID G+C + RA ++E ++S + ++ +N+L++
Sbjct: 2 RDHGCEPNVVTYNSLID--GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 59
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L+ + +++ M D+ S+NIL+ C AG A E + ++ + +V
Sbjct: 60 KLERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDRCSP-----NV 113
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A A+++ E M + G +P+ IT++ L++ V A + E
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDR 478
ML AGC PN N LL A + A L R T + V G DG R
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALM 536
+ KD ++ DK P YN+L+ C AL+
Sbjct: 234 V-----KDACAMLA----------DMIDK--GGTPDLMIYNMLINGLCKADQVDESIALL 276
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ G+ P+ ++++ +I S ++ A ++L ++ G PDV+ Y+T I ++
Sbjct: 277 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++ +AF L+E M ++VTY TL+ + G + E LA M + G +
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA---RMVRMGTPPST 393
Query: 657 TYLKELIEEWCE 668
LI+ C+
Sbjct: 394 MTYNSLIKGLCD 405
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 24/303 (7%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G PN +T++SLI+ ++A LFE M C P+ N LL +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+RA LF+ ++ + + ++ + K I F + D R
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNI-----LVTGLCRAGK--IETALEF-----FRKMDDR 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
S P TY++L+ C +A L+ M+ G SP+ I++TIL+D V
Sbjct: 109 CS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 166
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + G P++V Y + + R++R+ A +L +M PN+VTY TL+
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 226
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR 686
+ G V+ A+ DM G + LI C+ +Q + L RR
Sbjct: 227 GLCKVG---RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA-----DQVDESIALLRR 278
Query: 687 TNS 689
S
Sbjct: 279 AVS 281
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 152/400 (38%), Gaps = 76/400 (19%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-----------GVLKL-- 361
M+ G ++ +YN L+ C AQE++ +K +E G+ +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 362 -----------------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
DV +++ +V A + AL+ M +PN IT+S L
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A V QA+ L E M GC P+ IL+ + + A+ + R
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR------- 172
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------F 511
E D + N + H +R S
Sbjct: 173 ------------------EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 214
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY L+ C RVK A++ +M G +P+ + + +LI+ + V+ ++
Sbjct: 215 TPNVVTYGTLIDGLCK-VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ G+ PDVV Y++ I RS RL +A L +K P+++ Y TL+
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G +V + +Y+ M G A+ LI+ C+
Sbjct: 334 CKAG---KVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCK 370
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 64/422 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ---NVTLNIYVFNS 296
A+ ++ K SP++ ++D G+C + K A +E LR N+ +NS
Sbjct: 132 AVELLESMKARGCSPDVITYTILVD--GLCKES-KVAAAWEVLREMLDAGCVPNLVTYNS 188
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ A + L + ++M G ++ +Y L+ C G A + ++ ++
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--ID 246
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D+ Y+ ++ A ++ + +S G+ P+ +T+SS+I + +
Sbjct: 247 KGGTP--DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A L + GC P+ + L+ +A + D AF L+ +V G+ D
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY--------EVMTGDGCDA 356
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+ TY+ L+ C +A
Sbjct: 357 D---------------------------------------VVTYSTLIDGLCKAGRVDEA 377
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ M +G P+ +++ LI +++ A+++++ M +P V Y I
Sbjct: 378 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 437
Query: 593 CVRSKRLKQ-AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R +R+ A F+EM + P+ +TY LL + LHE++ V M + G
Sbjct: 438 MCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH--LVLDQMVQLG 495
Query: 652 YK 653
Y+
Sbjct: 496 YR 497
>gi|297744686|emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 195/488 (39%), Gaps = 99/488 (20%)
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEF--RIVQLCVNKPDVNLAIRYACIVPRAD 221
RLL G + + L+E +E+ L ++D+ + + ++C ++ V A R+A ++P
Sbjct: 869 RLLSEGRLSDCIQLLEDMEKMGL--LDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPT 926
Query: 222 ILFCN--------------------FVREFGKKRD--LVSALRAYDASKKHLSS------ 253
+ N VRE G K D L + L + A + +
Sbjct: 927 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 986
Query: 254 --------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----N 301
PN++ +ID CG G K+ Y +RS+ V + VFN+L+
Sbjct: 987 EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG 1046
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A D F + + + D + L+KAC AG A+E+Y + KG ++
Sbjct: 1047 AVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEV 1106
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y+ V + W+ A V DM GV P+ + S+LI+ +AG ++ A +
Sbjct: 1107 ----YTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 1162
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+E G + L+ AC A + +A L+
Sbjct: 1163 QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDI---------------------- 1200
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
K PT +T N L+ A C KA+ +++M
Sbjct: 1201 -------------------------KSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDM 1235
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I+++IL+ A +++ L IL R+D ++P++V + +C+R R
Sbjct: 1236 KRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLR--RF 1293
Query: 600 KQAFSLFE 607
++A +L E
Sbjct: 1294 EKACALGE 1301
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 39/351 (11%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A ++ V+ + LK D Y+T++ A +
Sbjct: 920 KLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVR----EAGLKADCKLYTTLISTCAKS 975
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++A V PN T+ +LI+ C AG V +A + M EP+
Sbjct: 976 GKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVF 1035
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDRISNMEHKD 486
N L+ AC ++ DRAF + + + + +G G DR +
Sbjct: 1036 NALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREV---- 1091
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
Y D+ ++ K T Y I + + D+ ++ +M G+
Sbjct: 1092 ---------------YKMIDQ-YNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGV 1135
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ + + LID G +G ++ A ++++ R G+ +V+Y++ + C +K ++A
Sbjct: 1136 VPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALE 1195
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ ++K ++ P + T L+ A ++++ + V DM +AG N
Sbjct: 1196 LYVDIKSMKLNPTVSTMNALITALCEG---EQLEKAMEVLSDMKRAGLCPN 1243
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
+++ C ++ K+ +Y D++S + + N+L+ L+ +EV +M++
Sbjct: 1179 SLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRA 1238
Query: 319 GVMADMASYNILLKAC-------------------CLAGNTVLAQEIYGE-VKHLEAKGV 358
G+ + +Y+ILL A +A N V+ + + G ++ E
Sbjct: 1239 GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACA 1298
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
L V ++++ + D KW AL V + +SAGV P
Sbjct: 1299 LGEPVLSFNS-GRPQIDNKWTSSALMVYRETVSAGVIPT 1336
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+ +D K++ P I TI+ + G K+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + L +Y + L+ A ++ ++ NM K G D+ N L+ AG
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E++ L+ +V TY+T++K ++K W++ K+KE+
Sbjct: 351 LADAIKLFEEMESLQCTP----NVVTYNTVIKALFESKARASEAFLWYE---KMKEN--- 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P++ T+S LI+ VE+A+ L EEM + G P L+ A +A +++
Sbjct: 401 -GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF+ L E+ ++ R+ ++H K + + N K+
Sbjct: 460 ANELFQE---------LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM-----KKL 505
Query: 510 SFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN LM + TD +L+ M G +P+ S I+++ +G +
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTD--EAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA+++ M+ + PDVV+Y T + R+ ++A L +EM + +L+TY ++L
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 626 RARSRYGSLH 635
A + H
Sbjct: 624 EAVGKIDEDH 633
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 200/475 (42%), Gaps = 44/475 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R C++ AD+ V+ GK + + AL + K P ++I + G
Sbjct: 151 VRSTCVIGPADL--SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---KFTLEVYKNMQKLGVMADMASY 327
+ K +Y ++ ++ L V S + L + ++ M++ G+ Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L G ++ G V+ ++ KG L V+TY+ ++K A + A +
Sbjct: 269 TTILGIYFKLGRV---EKALGLVQEMKEKGC-ALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G P+ + ++LIN AG + A+ LFEEM C PN N +++A E+
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDY------DG--NTDRISN----MEHKDKQSITNTPN 495
RA F + K + + DG T+R+ +E D++ P
Sbjct: 385 A--RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----------------NE 538
S ++ K ++ + L + C RV A+M NE
Sbjct: 443 -AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +G +P+ ++ L+ G + A +L+ M E+G +PD+ ++ + R+
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
K A +F MK+ +I+P++V+Y T+L SR G E + + ++M G++
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM---KEMNSKGFE 613
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 27/315 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY ++ +A K ++M+ + S ++ A +V +A+ +F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++ C+P S N ++ ++ ++ L+ + Y
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVK------ 533
+ D S S FD K PT Y ++ Y+++
Sbjct: 243 LGRDD-------------SAISLFDEMKENGLHPTAKIYTTILGI----YFKLGRVEKAL 285
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ EM+ G + ++T LI G +G VE A I M ++G PDVV I +
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLL 345
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
++ RL A LFEEM+ Q PN+VTY T+++A + S + Y+ M + G
Sbjct: 346 GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA--LFESKARASEAFLWYEKMKENGVV 403
Query: 654 ANDTYLKELIEEWCE 668
+ LI+ +C+
Sbjct: 404 PSSFTYSILIDGFCK 418
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 172/399 (43%), Gaps = 56/399 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P ++++ + F K + +A + +D SP+ T+I G G ++
Sbjct: 359 IIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ ++ S+ + + + +L++V A ++ ++ M ++G+ ++ +Y L+
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ E++ K L+L+V Y+++V A + A+K+ ++M AG
Sbjct: 478 LCKHGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ IT++++I+A G +++A L +EML G +P N+L+ +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL W L K V P
Sbjct: 594 RLL-GWMLEKGIV----------------------------------------------P 606
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN LMK C + MR G++P+ ++ ILI + N++ A +
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
K M E G P V +Y IK + K++ +A LFEEM+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 180/413 (43%), Gaps = 22/413 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
G ++R + + L S + + + N+ ++ A++ + K + G+ + SYNI
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNI 263
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ + C G A + ++ + DV +YST++ + + ALK+ +DM
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTP----DVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ PN T++S+I G +A + EM+ P++ L+ +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F LSK + DY T I K P + + R
Sbjct: 380 RTANKWFDE-MLSK---KISPDYITYTTLIQGFGQGGKV-------IEPQNLFHEMISR- 427
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TY L+ C V A L NEM +G++PN +++ LID G ++ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L MR+ G+ +V Y + + ++ ++QA L +EM+ I P+ +TY T++ A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQG 679
R G + + + L Q+M G + L+ +C G+++D ++ G
Sbjct: 548 YCRLGDIDKAHKLL---QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 184/424 (43%), Gaps = 33/424 (7%)
Query: 252 SSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK-FT 308
S+P++ T+ID G C G+ K+ + +D++ + + N Y +NS++ + K F
Sbjct: 289 STPDVVSYSTVID--GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 309 LE-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E V + M ++ D Y L+ G+ A + + E+ L K + D TY+
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM--LSKK--ISPDYITYT 402
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ F + +M+S G+ P+ +T+++LI+ AG + A L EM+Q
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHK 485
G PN L+ + + D A L Q V + + N+E
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVG 543
K + + D P TY ++ A C D + L+ EM G
Sbjct: 523 IK--------LMKEMEVAGID------PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV-CVRSKRLKQA 602
L P +++ +L++ G +E ++L M E G+ PD + Y T +K C+R+ +
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS-MNTT 627
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+++ M++ + P+ TY L++ + +L E +Y++M + GY T L
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW---FLYKEMIEKGYVPTVTSYNAL 684
Query: 663 IEEW 666
I+ +
Sbjct: 685 IKRF 688
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 176/396 (44%), Gaps = 31/396 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D RS T ++ ++++++ H +LK L++ +MQ G+ + +YN ++ C G
Sbjct: 285 DFRSS--TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG 342
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A+++ ++ + ++ ++ D Y+T++ F + A K ++MLS ++P+
Sbjct: 343 KSFEAEKV---LREMMSQKIIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI G V + +LF EM+ G +P+ L+ +A + AF L
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 459 WT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ V G DG K +T N + + ++ +
Sbjct: 459 MVQMGMTPNIVTYGALIDGLC----------KHGELDTANELLDEM-----RKKGLQLNV 503
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN ++ C + + LM EM G+ P+ I++T +IDA G+++ A ++L+
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M + G+ P VV + + L+ L M I P+ +TY TL++ S
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++ + +Y+ M G + LI+ C+
Sbjct: 624 MNTTTK---IYKRMRNQGVAPDSNTYNILIKGHCKA 656
>gi|397621823|gb|EJK66480.1| hypothetical protein THAOC_12600 [Thalassiosira oceanica]
Length = 820
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 179/420 (42%), Gaps = 57/420 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDA---SKKHLS-SPNMYICRTIIDVCGICGDYMKSR 276
+++ F R G+ RD +SAL + S+ H + +P++ + +T++ + +
Sbjct: 315 EVVITGFSRR-GRIRDALSALSRMEGQLDSEHHSNLNPSLSVYQTLLVSLASKQQFSQMN 373
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQK-LGVMADMASYNILL 331
+ +R + V +Y FN+L+ V A + + + Q+ GV D+ +Y +
Sbjct: 374 TLLTSMRRRGVRPTVYTFNALLKVCASSKSPRWREAVSLLSQCQREPGVSPDIITYTSTM 433
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+A A +++ +K ++LDVF Y+T + A W+ AL++ E+M
Sbjct: 434 RALAKGKQARKALDLFRAMKDTG----IQLDVFAYTTTMDACAKTNNWKKALQLLEEMRE 489
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V PN +T+ +NAC N G + A+ L + M +G NS N + A +A + D
Sbjct: 490 NNVPPNEVTYGVAVNACGNGGQWQTALSLLQTMNDSGMRINSITYNSAIAALSKAARLDA 549
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
W KTQ LGE +
Sbjct: 550 GPDPNVLW--EKTQHILGEMHS-----------------------------------RGV 572
Query: 512 KPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHI-SWTILIDACGGSGNVE 565
+ T TY+ + C + + R+ M + T G N I ++T I AC S +
Sbjct: 573 RQDTFTYSSAISVCGSAGRWEEAVRLIHQMKDSGTNGTKRNKIVAFTSAITACANSKQWD 632
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M+ DG++PD+VA+ I + + R + + L+ E+ + P++VT +L
Sbjct: 633 PANQLFQEMKRDGLAPDLVAFNALIGAGMAAGRPDEVYHLWREIGASNLSPDVVTLTEVL 692
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 507 KRFSFKPTTTTYNILMKACCTD----YYRVKALMNE-MRTVGLSPNHISWTILIDACGGS 561
+R +PT T+N L+K C + + +L+++ R G+SP+ I++T + A
Sbjct: 380 RRRGVRPTVYTFNALLKVCASSKSPRWREAVSLLSQCQREPGVSPDIITYTSTMRALAKG 439
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
AL + + M++ G+ DV AYTT + C ++ K+A L EEM+ + PN VTY
Sbjct: 440 KQARKALDLFRAMKDTGIQLDVFAYTTTMDACAKTNNWKKALQLLEEMRENNVPPNEVTY 499
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ A G+ + Q L++ Q M +G + N
Sbjct: 500 GVAVNA---CGNGGQWQTALSLLQTMNDSGMRIN 530
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY M+A KAL M+ G+ + ++T +DAC + N + ALQ+
Sbjct: 424 PDIITYTSTMRALAKGKQARKALDLFRAMKDTGIQLDVFAYTTTMDACAKTNNWKKALQL 483
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ MRE+ + P+ V Y A+ C + + A SL + M ++ N +TY + + A S+
Sbjct: 484 LEEMRENNVPPNEVTYGVAVNACGNGGQWQTALSLLQTMNDSGMRINSITYNSAIAALSK 543
Query: 631 YGSL 634
L
Sbjct: 544 AARL 547
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 20/321 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR---AMGLLP-DVITYNSLLNGYC 383
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ LI+ G +E+A L EEM++ GC P+
Sbjct: 384 KAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVY 443
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNT 493
IL++ C R F LSK L D + NT + + D
Sbjct: 444 TYTILMKGSHNVCSLAMT-REFFDEMLSK---GLRPDCFAYNTRICAEITLGDISKSFQL 499
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
+ SS T TYNIL+ C + + LM +M + GL P+ I++
Sbjct: 500 REVIMLEGISS---------DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITY 550
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LI A G + A + M DG+ P V YT I R L A+ F +M
Sbjct: 551 TCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLE 610
Query: 612 YQIQPNLVTYITLLRARSRYG 632
++PN +TY L+ A R G
Sbjct: 611 EGVEPNEITYNVLIHALCRMG 631
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 30/357 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + + +N++++ + + ++ + M+ +G++ D+ +YN LL C AG
Sbjct: 327 EMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAG 386
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A ++G+++ + L V TY+ ++ + + A ++KE+M+ G P+
Sbjct: 387 NQKEALLLFGDLR----RAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 442
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T++ L+ N + F+EML G P+ N + A + ++F+L
Sbjct: 443 YTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREV 502
Query: 459 WTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L S V DG T + + E Q I+N +P
Sbjct: 503 IMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISN-----------------GLQP 545
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N+M + GL P+ +++T++I A GN+ A
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ M E+G+ P+ + Y I R R + A+ F EM + PN TY L+ +
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGK 662
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + D+ + ++ + + G+ +D +YNIL+
Sbjct: 461 TREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+E+ + + + G L+ D TY+ ++ + + + A K DM+S
Sbjct: 521 GLCKTGNLKDAEEL---MMQMISNG-LQPDCITYTCLIHAHCERGFLREARKFFNDMISD 576
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +T++ +I+A G + A F +ML+ G EPN N+L+ A + A
Sbjct: 577 GLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 636
Query: 453 FRLF 456
+R F
Sbjct: 637 YRHF 640
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + + GV DV + +++V DA W V +ML G+ P+ +T+++L+++ +
Sbjct: 185 REMASHGVAP-DVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243
Query: 411 AGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G ++ L +EM G C PN N+++ + A L LSK +
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF 303
Query: 469 -------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G G ++ +++ + + PT TYN +
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENE--------------------GIMPTVVTYNAM 343
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ +A EMR +GL P+ I++ L++ +GN + AL + +R G+
Sbjct: 344 IHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGL 403
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P V+ Y I R L++A L EEM P++ TY L++ SL ++
Sbjct: 404 APTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTRE 463
Query: 640 CLAVYQDMWKAGYKAN 655
+ +M G + +
Sbjct: 464 ---FFDEMLSKGLRPD 476
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ L +M S GV P+ + ++ +A + + EMLQ G EP+ N LL
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + D+ L + ++ L D N I+ + K ++ +
Sbjct: 239 DSFSKEGRKDKIDMLLKEME-ARGSSCLPNDVTYNV-VIAGLARK---------GYLEEA 287
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDAC 558
+ R S K ++ TYN L+ + +V L EM G+ P +++ +I
Sbjct: 288 AELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGL 347
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG +E A MR G+ PDV+ Y + + ++ K+A LF +++ + P +
Sbjct: 348 LQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTV 407
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
+TY L+ R G L E ++
Sbjct: 408 LTYNILIDGYCRLGDLEEARR 428
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 165/365 (45%), Gaps = 22/365 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M G++ D+ Y++L + C G +++ E+ L GV K +V+ Y+ ++
Sbjct: 221 YQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL---GV-KPNVYIYTIYIR 276
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E M GV PN T+S++I+ G + QA L++E+L A P
Sbjct: 277 DLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLP 336
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ F +A L + +L V G D N + + H +S
Sbjct: 337 NVVVFGTLVDG------FCKARELVAARSLFVHMVKFG--VDPNLYVYNCLIHGQCKS-- 386
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + S + + P TY IL+ CT+ +A L M+ + P+ +
Sbjct: 387 --GNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSV 444
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI N+E AL + M G+ P+++ ++T I + + +K A L+ EM
Sbjct: 445 TYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEM 504
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCE 668
I P++VTY TL+ A + ++ E L +Y DM +AG ND L++ W E
Sbjct: 505 TIKGIVPDVVTYTTLIDAHFKEANMKEA---LRLYSDMLEAGIHPNDHTFACLVDGFWKE 561
Query: 669 GVIQD 673
G + D
Sbjct: 562 GRLSD 566
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 30/406 (7%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
++R+ ++ + A + ++ K H PN+Y +ID G C G+ ++ +Y+++
Sbjct: 274 YIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMID--GYCKTGNLRQAYGLYKEILV 331
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ N+ VF +L++ A +L ++ +M K GV ++ YN L+ C +GN +
Sbjct: 332 AELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLE 391
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + E++ L L DVFTY+ ++ + A ++ + M + + P+++T++
Sbjct: 392 AMGLLSEMESLN----LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYN 447
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ +E+A+ L EM +G EPN + L+ + A L+ T+
Sbjct: 448 SLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIK 507
Query: 463 ---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V D + + E S PN H + +K +
Sbjct: 508 GIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDA 567
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSP------NHISWTILIDACGGSGNVEGALQILKI 573
I D+Y L N G S ++ +T LI+ +G + A +
Sbjct: 568 I-------DFY----LENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSD 616
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
M+ G++PD+ +Y + +K +R KR+ L +M I PNL+
Sbjct: 617 MKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLM 662
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 38/304 (12%)
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ W L M+S G+ P+ +S L C G + L +EM G +PN
Sbjct: 215 DSVWVDYQL-----MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVY 269
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--DGNTDRISNMEHKD 486
I ++ + + A ++F + T A+ + Y GN + + +K+
Sbjct: 270 IYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL-YKE 328
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
PN V + L+ C + ++L M G+
Sbjct: 329 ILVAELLPNVV-------------------VFGTLVDGFCKARELVAARSLFVHMVKFGV 369
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN + LI SGN+ A+ +L M +SPDV YT I +RL +A
Sbjct: 370 DPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANR 429
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF+ MK+ +I P+ VTY +L+ + + +++ L + +M +G + N LI+
Sbjct: 430 LFQRMKNERIFPSSVTYNSLIHG---FCKEYNIEKALDLCSEMTSSGVEPNIITFSTLID 486
Query: 665 EWCE 668
+C+
Sbjct: 487 GYCK 490
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F V F K R+LV+A + K PN+Y+ +I G C G+ +++ +
Sbjct: 339 VVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH--GQCKSGNMLEAMGLL 396
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S N++ +++ + L+N L +++ M+ + +YN L+ C
Sbjct: 397 SEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKE 456
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A ++ E + + GV + ++ T+ST++ + + + A+ + +M G+ P+
Sbjct: 457 YNIEKALDLCSE---MTSSGV-EPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPD 512
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+T+++LI+A +++A+ L+ +ML+AG PN
Sbjct: 513 VVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDH 549
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 15/227 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYM 273
I P + + + + + F K+ ++ AL PN+ T+ID G C +
Sbjct: 439 IFP-SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLID--GYCKVRNIK 495
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNI 329
+ +Y ++ + + ++ + +L ++AH ++K L +Y +M + G+ + ++
Sbjct: 496 AAMGLYFEMTIKGIVPDVVTYTTL--IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 553
Query: 330 LLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTY---STIVKVFADAKWWQMALKV 385
L+ G A + Y E K +++ + Y + +++ + A +
Sbjct: 554 LVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRF 613
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
DM S GVTP+ ++ S++ A + M L +M++ G PN
Sbjct: 614 FSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +FN+L++ V L V +M G++ D+ +YN L+ G LA E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++++ KG K +V++Y+ +V F A V +M + G+ PNT+ ++ LI+A
Sbjct: 413 HDMRN---KGC-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ +A+ +F EM + GC+P+ N L+ E + A L R +S+ VA
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD-MISEGVVA 527
Query: 468 LGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ + + E K+ + + N F S D+ TYN L+K C
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVF----QGSPLDE--------ITYNSLIKGLC 575
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + ++L +M G +P++IS ILI+ SG VE A++ K M G +PD+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + I R+ R++ ++F +++ I P+ VT+ TL+ + G +++
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 35/331 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K F AL + DM G PN++ + +LI++ + V +A+ L E
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N ++ + C+FDR R F ++ + G
Sbjct: 277 EMFLMGCVPDAETFNDVI---LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 472 YDGNTDRISNMEH---KDKQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G D ++ + K + I NT FV +H D + T+Y I+ C
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV--THGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 527 TD-----YYR------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ Y++ ++++MR G PN S+TIL+D G ++ A +L M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
DG+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVD 508
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E++ L + +DM G AN LI +
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 55/354 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ D+R++ N+Y + L++ + V M G+ + +N L+ A C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A EI+ E+ KG K DV+T+++++ + + AL + DM+S GV
Sbjct: 471 KEHRIPEAVEIFREMPR---KGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
NT+T+++LINA G +++A L EM+ G + N L++ A + D+A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F DG+ P+
Sbjct: 587 FEKML-----------RDGHA------------------------------------PSN 599
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ NIL+ C +A EM G +P+ +++ LI+ +G +E L + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ +G+ PD V + T + + + A L +E PN T+ LL++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 163/429 (37%), Gaps = 46/429 (10%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L I L++ N H K V+ +M + + ++ +++KA C
Sbjct: 182 FKSYNVVLEI-----LVSGNCH--KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ E+M G P+ T+
Sbjct: 235 SALSL---LRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +I + +A + ML G P+ L+ + + D A LF + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRI 348
Query: 462 SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRF----- 509
K ++ + G G D + S P+ NS + K
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 510 ----------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
KP +Y IL+ C + Y V +NEM GL PN + + L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV---LNEMSADGLKPNTVGFNCL 465
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A + A++I + M G PDV + + I +K A L +M +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
N VTY TL+ A R G + E ++ + +M G ++ LI+ C DK
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARK---LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 675 NQNQGEVTL 683
++ E L
Sbjct: 583 ARSLFEKML 591
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 519
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G D +YN L+K C AG
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ + DR
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 27/335 (8%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG D SY L+ C G T A ++ ++ ++ K +++L+ Y+T++ K
Sbjct: 36 LGFHLDQVSYGTLIHGLCKVGETRAALDL---LQRVDGK-LVQLNAVMYNTVIYGMCKDK 91
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A + +M+S G++PN +T+S+LI+ G ++ A+ LF +++ +P+ N
Sbjct: 92 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 151
Query: 438 ILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL+ + + F + + V DG R+ E +SI NT
Sbjct: 152 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY--RLVK-EVNTAKSIFNTM 208
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
+ P +YNIL+ C KA L NEM + PN +++
Sbjct: 209 ------------AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 256
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID SG + ALQ++ M + G+ P+++ Y + I ++ ++ +A +L + K
Sbjct: 257 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 316
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IQP++ TY L+ + G L + + +++D+
Sbjct: 317 GIQPSMYTYTILIDGLCKGGRLKDARN---IFEDL 348
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 149/352 (42%), Gaps = 59/352 (16%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G+C G+ + + + + + V LN ++N+++ D + ++Y M G+
Sbjct: 49 IHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI 108
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +Y+ L+ + G A +++ ++ LE +K D +T++ +V F + +
Sbjct: 109 SPNVVTYSALISGFFVVGKLKDAIDLFNKII-LEN---IKPDGYTFNILVDGFCKDRKMK 164
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
V M+ G+ P+ +T++SL++ V A +F M Q G P+ + NIL+
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + D+A LF + N +PN
Sbjct: 225 NGFCKIKKVDKAMNLFNEM--------------------------------HCKNIIPN- 251
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDA 557
TYN L+ Y ++ L+++M G+ PN +++ +IDA
Sbjct: 252 --------------VVTYNSLIDGLSKSGRISYALQ-LVDQMHDRGVPPNILTYNSIIDA 296
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ V+ A+ ++ ++ G+ P + YT I + RLK A ++FE++
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SPN+ +I + G + ++ + +N+ + Y FN L++ D +K
Sbjct: 109 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 168
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G++ D+ +YN L+ L A+ I+ + A+G + D+ +Y+ ++
Sbjct: 169 VFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTM----AQGGVNPDIRSYNILI 224
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K A+ + +M + PN +T++SLI+ + +G + A+ L ++M G
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 284
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW 459
PN N ++ A + Q D+A L +
Sbjct: 285 PNILTYNSIIDALFKTHQVDKAIALITKF 313
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P T T N L+K C +A + +++ +G + +S+ LI G A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 568 LQILKIMREDG--MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L +L+ R DG + + V Y T I + K + AF L+ EM I PN+VTY L+
Sbjct: 62 LDLLQ--RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 119
Query: 626 RARSRYGSLHEVQQCL--AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
G L + + +++ GY N L++ +C +D+ +G+
Sbjct: 120 SGFFVVGKLKDAIDLFNKIILENIKPDGYTFN-----ILVDGFC----KDRKMKEGKTVF 170
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C D + A L +EM + G+SPN ++++ LI G ++ A+ + +
Sbjct: 80 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PD + + + +++K+ ++F M I P++VTY +L+ Y +
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDG---YRLVK 196
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
EV +++ M + G + LI +C+ DK N
Sbjct: 197 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 195/467 (41%), Gaps = 47/467 (10%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F ++ L AL K PN+ ++++ G C S
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN--GYCHSKRISE 169
Query: 277 AI-------YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ + VT N + ++ A + + + M G D+ +Y +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGV 226
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G+T LA + +++ +G L+ V Y+TI+ K AL + ++M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN +T+SSLI+ N G A L +M++ P+ + L+ A V+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L YD R + S+ N F + + F
Sbjct: 343 VEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMF 384
Query: 510 SFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGG 560
F P TYN L+K C Y RV+ M EM GL N +++ ILI
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y ++ + G +V+ ++ ++ G K + +I +C
Sbjct: 504 YNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 254 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 367
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 461
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 462 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 184/433 (42%), Gaps = 46/433 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPF----------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D AF L K + + Y+ D + +H K+ ++
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGV-LIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T++ L+ A + V+A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + P+ ++++ LI+ ++ A Q+ + M PDVV Y T IK +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
KR+++ +F EM + N VTY L++ + G Q+ ++++M G N
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPN 465
Query: 656 DTYLKELIEEWCE 668
L++ C+
Sbjct: 466 IMTYNTLLDGLCK 478
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 181/420 (43%), Gaps = 38/420 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR + K +PN C T++D G ++ ++++ ++ + N+ FN+++N
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE-AK 356
+ E+ M++L D +Y L C G A + +++HL A
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
V + F + AK W + +M + G++PN +T+ +LI G + +
Sbjct: 568 SVEMFNSFITGHFI-----AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +L+ EM+ G PN C+ L+ + + D A + + N
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV--------------NI 668
Query: 477 DRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRV 532
D I ++ + I++ + + + + S +N+++ C
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHS---------ANVMWNVIIFGLCKSGRIADA 719
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L +R P++ +++ LI C SG+++ A + +M G++P+++ Y + I
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+S +L +A +LF +++ I PN +TY TL+ + G + + + Q M + GY
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG---KTTEAFKLKQKMVEEGY 836
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 68/378 (17%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVM 321
C D ++A+ E++ + +N+ ++++M+ D + LE ++Q+ G+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE---SLQRKGLS 285
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y +L+K C G A+ + VK ++ G + +D Y ++ +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERV---VKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A +V+ +M AG+ N ++++IN G +E+ + +EM G P+ N L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+AF + R
Sbjct: 403 GYCREGSMRKAFEMCRMMV----------------------------------------- 421
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILID 556
R TT TYN L+K C+ D R+ LM + G++PN IS + L+D
Sbjct: 422 ------RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR---GVAPNEISCSTLLD 472
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E AL + K G++ +V+ + T I + R+ +A L + MK + P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 617 NLVTYITLLRARSRYGSL 634
+ +TY TL + G L
Sbjct: 533 DSLTYRTLFDGYCKLGQL 550
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 166/397 (41%), Gaps = 31/397 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y D V+ ++ + + +A L L V+ M K+G + S N LL +
Sbjct: 140 VYRDFTFSAVSFDLLL---RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ +A +YG+++ GVL D FT + + K + A++ E+M G+ N
Sbjct: 197 GDPGMAAMVYGQMR---IAGVLP-DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + ++++ G E A + E + + G PN +L++ + + + A R+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 458 ----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + +VA G +G R M+ D + N H + F
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQR-GRMD--DATRVRNEMRDA-GIHVNLF-------- 360
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN ++ C V+ ++ EM VG+ P+ S+ LID G++ A ++
Sbjct: 361 ---VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++M +G++ + Y T +K + A L+ M + PN ++ TLL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + +Q L ++++ G N +I C+
Sbjct: 478 G---KTEQALNLWKETLARGLAKNVITFNTVINGLCK 511
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 175/435 (40%), Gaps = 29/435 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+ID G C G K+ + + + +N+L+ + H + L
Sbjct: 392 PDKYSYNTLID--GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M K GV + S + LL AG T A ++ E A+G+ K +V T++T+
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL---ARGLAK-NVITFNTV 505
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A ++ + M P+++T+ +L + G + A HL +M G
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDY-----DGNTDRISN 481
P+ + N + A Q+ + + + LS V G +GN N
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY----NI-LMKACCTDYYRVKALM 536
+ + + N F+ ++ S F K NI ++ C + +
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685
Query: 537 NEMRTVGLSPNH---ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + T+ H + W ++I SG + A + + +R PD Y++ I C
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S + +AFSL + M + PN++TY +L+ + G L + + ++ + G
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL---SRAVNLFNKLQSKGIS 802
Query: 654 ANDTYLKELIEEWCE 668
N LI+E+C+
Sbjct: 803 PNGITYNTLIDEYCK 817
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M+ G+ ++ YN ++ C G Q++ E++ + ++ D ++Y+T++
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG----MRPDKYSYNTLI 401
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A ++ M+ G+ T+T+++L+ + ++ A+ L+ ML+ G
Sbjct: 402 DGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVA 461
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN C+ LL +A + ++A L++ TL++
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKE-TLAR--------------------------- 493
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
T+N ++ C +A L++ M+ + P+
Sbjct: 494 -------------------GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDS 534
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ L D G + A ++ M G +P V + + I +K+ + + E
Sbjct: 535 LTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSE 594
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M + PNLVTY L+ + G+LHE +Y +M G N
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACN---LYFEMVNNGMNPN 638
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKL 318
+ G+C G +++++E LR++ + + ++SL++ A D F+L M
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR--DVMLSA 764
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L+ C +G A ++ + L++KG+ + TY+T++ +
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNK---LQSKGI-SPNGITYNTLIDEYCKEGK 820
Query: 379 WQMALKVKEDMLSAG----------------VTPNTITWSSLINACANAGLVEQAMHLFE 422
A K+K+ M+ G V PN IT+ +LI+ +G +E+ L++
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880
Query: 423 EMLQAGCEPNSQCCN 437
EM G P + N
Sbjct: 881 EMHIRGLLPTNWIGN 895
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
S NV N+ +F + D K E +N + + D +Y+ L+ C +G+
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKR---FLPDNFTYSSLIHGCAASGSI--- 751
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
E + ++ + L ++ TY++++ + A+ + + S G++PN IT+++
Sbjct: 752 DEAF-SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810
Query: 404 LINA-CANA---------------GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
LI+ C G +E+A+ L ++M++ +PN L+ +++
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 870
Query: 448 QFDRAFRLF 456
+ +L+
Sbjct: 871 NMEEISKLY 879
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDA 557
H + + F+F + ++++L++A D ++ + +N M VG P+ S L++
Sbjct: 136 HLAEVYRDFTF--SAVSFDLLLRAH-ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ A + MR G+ PD K R R+ QA EEM+ ++ N
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
LV Y ++ G + ++ L Q + G N L++ +C+
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQ---RKGLSPNVVTYTLLVKGYCK 300
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 66/356 (18%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLK 306
+P++Y +I G+C G +R ++E + + + N VF L ++AH D +
Sbjct: 183 TPDVYTYGALIQ--GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL--IDAHCKKGDAE 238
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LE+++ M++ GV D +YN ++ C A + A I E++ L+ D TY
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR----SAGLRPDTVTY 294
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + MA+++K++M++ GV + +T+++LI+ + AG A + EM++
Sbjct: 295 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG EP++ +++ A RL + M++K
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-----------------------EMQNKG 391
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ KP TYN++M C L+N M +G+
Sbjct: 392 R------------------------KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 427
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
SP+ I++ IL+D G V I ++ G PD+ YT+ + V+ K K
Sbjct: 428 SPDDITYNILLDGHCKHGKVT---DIEELKSAKGTVPDLGVYTSIVGEIVKKKTTK 480
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 24/369 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L + +FN LM V +L V+ MQ GV + S+N ++
Sbjct: 102 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG+ A+ ++ + + GV DV+TY +++ + A V E M G+
Sbjct: 162 CRAGDLDGAETLH---RRMSEAGVTP-DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 217
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN + ++ LI+A G E + L EM + G P++ N ++ A A
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277
Query: 455 L---FRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ RS L V DG + +M + KQ++ + Y++ S
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 337
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ D RV + EM GL P++ ++T++IDA G+V+ L++
Sbjct: 338 KAGRS-----------ADAERV---LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 383
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
LK M+ G P VV Y + + ++K A L M + + P+ +TY LL +
Sbjct: 384 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 443
Query: 631 YGSLHEVQQ 639
+G + ++++
Sbjct: 444 HGKVTDIEE 452
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 144/359 (40%), Gaps = 56/359 (15%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y + G+ + +N+L++ G AQ ++ E ++++GV + V +++T++
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDE---MQSRGVRRT-VVSFNTMIS 159
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + M AGVTP+ T+ +LI G +E A +FE+M G +P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL+ A + + L R
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREM-------------------------------- 247
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +P TYN ++ C D ++ EMR+ GL P+ +
Sbjct: 248 ---------------RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID ++ A++I + M +G+ D V YT I ++ R A + EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++P+ TY ++ A R G +V+ L + ++M G K ++ +C+
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCK 408
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 29/256 (11%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDY 472
+A + ++L AG P ++ N+L++ V + A +F +S + +T V+
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACC--T 527
G R +++ + + +R S P TY L++ C
Sbjct: 159 SGMC-RAGDLDGAE-----------------TLHRRMSEAGVTPDVYTYGALIQGLCRVG 200
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +M G+ PN + +TILIDA G+ E L++ + MRE G+ PD V Y
Sbjct: 201 RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYN 260
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R++ LK A + EM+ ++P+ VTY TL+ Y E+ + + Q+M
Sbjct: 261 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG---YCKEEELDMAMEIKQNM 317
Query: 648 WKAGYKANDTYLKELI 663
G ++ LI
Sbjct: 318 VAEGVGLDEVTYTALI 333
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +ID GD ++ ++R + V + +N+++N A DLK +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ D +Y L+ C +A EI +++ A+GV LD TY+ ++
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK---QNMVAEGV-GLDEVTYTALIS 334
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A A +V +M+ AG+ P+ T++ +I+A G V+ + L +EM G +P
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+++ + Q A L + +S + DG+ + + D +
Sbjct: 395 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHC---KHGKVTDIE 451
Query: 489 SITNTPNFVPN-SHYSSFDKRFSFKPTTTTYN 519
+ + VP+ Y+S K TT TY+
Sbjct: 452 ELKSAKGTVPDLGVYTSIVGEIVKKKTTKTYH 483
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+ +D K++ P I TI+ + G K+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + L +Y + L+ A ++ ++ NM K G D+ N L+ AG
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E++ L+ +V TY+T++K ++K W++ K+KE+
Sbjct: 351 LADAIKLFEEMESLQCTP----NVVTYNTVIKALFESKARASEAFLWYE---KMKEN--- 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P++ T+S LI+ VE+A+ L EEM + G P L+ A +A +++
Sbjct: 401 -GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF+ L E+ ++ R+ ++H K + + N K+
Sbjct: 460 ANELFQE---------LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM-----KKL 505
Query: 510 SFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN LM + TD +L+ M G +P+ S I+++ +G +
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTD--EAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA+++ M+ + PDVV+Y T + R+ ++A L +EM + +L+TY ++L
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 626 RARSRYGSLH 635
A + H
Sbjct: 624 EAVGKIDEDH 633
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 200/475 (42%), Gaps = 44/475 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R C++ AD+ V+ GK + + AL + K P ++I + G
Sbjct: 151 VRSTCVIGPADL--SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---KFTLEVYKNMQKLGVMADMASY 327
+ K +Y ++ ++ L V S + L + ++ M++ G+ Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L G ++ G V+ ++ KG L V+TY+ ++K A + A +
Sbjct: 269 TTILGIYFKLGRV---EKALGLVQEMKEKGC-ALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G P+ + ++LIN AG + A+ LFEEM C PN N +++A E+
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDY------DG--NTDRISN----MEHKDKQSITNTPN 495
RA F + K + + DG T+R+ +E D++ P
Sbjct: 385 A--RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----------------NE 538
S ++ K ++ + L + C RV A+M NE
Sbjct: 443 -AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +G +P+ ++ L+ G + A +L+ M E+G +PD+ ++ + R+
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
K A +F MK+ +I+P++V+Y T+L SR G E + + ++M G++
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM---KEMNSKGFE 613
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 27/315 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY ++ +A K ++M+ + S ++ A +V +A+ +F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++ C+P S N ++ ++ ++ L+ + Y
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVK------ 533
+ D S S FD K PT Y ++ Y+++
Sbjct: 243 LGRDD-------------SAISLFDEMKENGLHPTAKIYTTILGI----YFKLGRVEKAL 285
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ EM+ G + ++T LI G +G VE A I M ++G PDVV I +
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLL 345
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
++ RL A LFEEM+ Q PN+VTY T+++A + S + Y+ M + G
Sbjct: 346 GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA--LFESKARASEAFLWYEKMKENGVV 403
Query: 654 ANDTYLKELIEEWCE 668
+ LI+ +C+
Sbjct: 404 PSSFTYSILIDGFCK 418
>gi|359474892|ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 195/488 (39%), Gaps = 99/488 (20%)
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEF--RIVQLCVNKPDVNLAIRYACIVPRAD 221
RLL G + + L+E +E+ L ++D+ + + ++C ++ V A R+A ++P
Sbjct: 434 RLLSEGRLSDCIQLLEDMEKMGL--LDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPT 491
Query: 222 ILFCN--------------------FVREFGKKRD--LVSALRAYDASKKHLSS------ 253
+ N VRE G K D L + L + A + +
Sbjct: 492 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 551
Query: 254 --------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----N 301
PN++ +ID CG G K+ Y +RS+ V + VFN+L+
Sbjct: 552 EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG 611
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A D F + + + D + L+KAC AG A+E+Y + KG ++
Sbjct: 612 AVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEV 671
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y+ V + W+ A V DM GV P+ + S+LI+ +AG ++ A +
Sbjct: 672 ----YTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 727
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+E G + L+ AC A + +A L+
Sbjct: 728 QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDI---------------------- 765
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
K PT +T N L+ A C KA+ +++M
Sbjct: 766 -------------------------KSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDM 800
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I+++IL+ A +++ L IL R+D ++P++V + +C+R R
Sbjct: 801 KRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLR--RF 858
Query: 600 KQAFSLFE 607
++A +L E
Sbjct: 859 EKACALGE 866
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A ++ V+ + LK D Y+T++ A +
Sbjct: 485 KLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVR----EAGLKADCKLYTTLISTCAKS 540
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++A V PN T+ +LI+ C AG V +A + M EP+
Sbjct: 541 GKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVF 600
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDRISNM-EHK 485
N L+ AC ++ DRAF + + + + +G G DR + +
Sbjct: 601 NALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMI 660
Query: 486 DKQSITNTP---NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
D+ +I TP +SH D F++ ++ +M
Sbjct: 661 DQYNIKGTPEVYTIAVSSHSQIGDWEFAY----------------------SVYTDMTRK 698
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LID G +G ++ A ++++ R G+ +V+Y++ + C +K ++A
Sbjct: 699 GVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKA 758
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ ++K ++ P + T L+ A ++++ + V DM +AG N
Sbjct: 759 LELYVDIKSMKLNPTVSTMNALITALCEG---EQLEKAMEVLSDMKRAGLCPN 808
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
+++ C ++ K+ +Y D++S + + N+L+ L+ +EV +M++
Sbjct: 744 SLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRA 803
Query: 319 GVMADMASYNILLKAC-------------------CLAGNTVLAQEIYGE-VKHLEAKGV 358
G+ + +Y+ILL A +A N V+ + + G ++ E
Sbjct: 804 GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACA 863
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
L V ++++ + D KW AL V + +SAGV P
Sbjct: 864 LGEPVLSFNS-GRPQIDNKWTSSALMVYRETVSAGVIP 900
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 35/436 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 373
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 492
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 493 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ + + +Q N + ++ + ++V+ +++ M + G + T L+
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKGLVPDRTAYTSLM-- 655
Query: 666 WCEGVIQDKNQNQGEV 681
D N QG V
Sbjct: 656 -------DGNFKQGNV 664
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 181/417 (43%), Gaps = 34/417 (8%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNV 287
+FGK L L Y K + PN+ T++D C + M +AI Y D+R +
Sbjct: 344 KFGK---LPIGLEFYREMKGNGLKPNVVSYSTLVD--AFCKEGMMQQAIKFYVDMRRVGL 398
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N Y + SL++ N +L + M ++GV ++ +Y L+ C A A+E
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++G+ ++ GV+ ++ +Y+ ++ F AK AL++ ++ G+ P+ + + + I
Sbjct: 459 LFGK---MDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
+ +E A + EM + G + NS L+ A ++ L + +
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
T V DG ++K + N + N F + + ++
Sbjct: 575 VTVVTFCVLIDGLC------KNKLVSKAVDYFNRISND--------FGLQANAAIFTAMI 620
Query: 523 KACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
C D +V+A L +M GL P+ ++T L+D GNV AL + M E GM
Sbjct: 621 DGLCKD-NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D++AYT+ + +L++A S EEM I P+ V I++L+ G + E
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 182/437 (41%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 394 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT-VGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ N + GL N +T +ID V
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A + + M + G+ PD AYT+ + + + +A +L ++M ++ +L+ Y +L
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 625 LRARSRYGSLHEVQQCL 641
+ S L + + L
Sbjct: 690 VWGLSHCNQLQKARSFL 706
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 52/276 (18%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F K + G +PT
Sbjct: 249 FF------KDMIGAGA-----------------------------------------RPT 261
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ QQ + Y DM + G N+ LI+ C+
Sbjct: 382 MM---QQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 507 KRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KRF P T + N L+ K TD VK +M G P ++ I+ID G
Sbjct: 219 KRFRVFPKTRSCNGLLHRFAKLGKTD--DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+VE A + + M+ G+ PD V Y + I + RL FEEMK +P+++TY
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
L+ ++G L L Y++M G K N L++ +C EG++Q
Sbjct: 337 ALINCFCKFGKL---PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 261 TIIDVC----GICGDYMKSRAI-YEDLRSQNVTL--NIYVFNSLMNVNAHD--LKFTLEV 311
T++ C G+C + + S+A+ Y + S + L N +F ++++ D ++ +
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G++ D +Y L+ GN + A + ++ + +KLD+ Y+++V
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG----MKLDLLAYTSLVW 691
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Q A E+M+ G+ P+ + S++ G +++A+ L
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 65/436 (14%)
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIY--------------------------VFNS 296
+D G+ M+ + +Y DL + N +N Y +N+
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+N + + V M +G+ + A++N +L C + A+ ++ E+
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ-- 357
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV+ D+ ++S+IV VF+ AL E M G+ P+T+ ++ LIN V
Sbjct: 358 -RGVVP-DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSKT 464
A+ + EM++ GC + N LL D A LF+ +TL T
Sbjct: 416 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL--T 473
Query: 465 QVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFK---------- 512
+ G DGN T +S E +S+ P+ V N+ F K +
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSL--KPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531
Query: 513 -----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P+ +++IL+ C+ +A L +EM+ G+ P ++ +I +GN+
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A L M +G+ PD + Y T I V+ + +AF L M+ + PNLVTY +L
Sbjct: 592 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651
Query: 626 RARSRYGSLHEVQQCL 641
SR+G + E + L
Sbjct: 652 GGFSRHGRMQEAEMVL 667
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 174/408 (42%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I F + V F + +L AL ++ K P+ I +I+ G C D
Sbjct: 360 VVPDL-ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN--GYCRNDDVS 416
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + ++ + +++ +N+L+N L E++K M + GV D + L+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++ E L + LK DV TY+T++ F + A ++ DM+S
Sbjct: 477 HGYCKDGNMTKALSLF-ETMTLRS---LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P+ I++S LIN + GLV +A L++EM + G +P CN +++ + R
Sbjct: 533 REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG------YLR 586
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A L ++ T ++ G VP
Sbjct: 587 AGNLSKANDFLNTMISEG---------------------------VP------------- 606
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + + + R L+N M GL PN +++ ++ G ++ A
Sbjct: 607 -PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEM 665
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+L M + G++PD YT+ I V +K+AF + +EM P+
Sbjct: 666 VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 175/405 (43%), Gaps = 60/405 (14%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E LR + ++I N+L+ V + +VY++ K G + +
Sbjct: 164 YVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVN 223
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C G + + +E KGV D+ TY+T+V + A
Sbjct: 224 VYTLNIMVNALCKDGK---LDNVGVYLSEMEEKGVYA-DLVTYNTLVNAYCRRGLVSEAF 279
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ + M G+ P T+++LIN G E+A + +EML G PN+ N +L
Sbjct: 280 GLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML--- 336
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE+C+ + + +R+ N E + + P+ + +S
Sbjct: 337 VESCRKEDVWE---------------------AERVFN-EMLQRGVV---PDLI---SFS 368
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S FS + R A +M+ VGL P+ + +TILI+ + +
Sbjct: 369 SIVGVFSRN--------------GELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V GAL++ M E G DVV Y T + R K L A LF+EM + P+ T T
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ + G++ + L++++ M K + L++ +C+
Sbjct: 475 LIHGYCKDGNM---TKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 179/430 (41%), Gaps = 58/430 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+K D+ A R ++ + P++ +I+ V G+ ++ A +E ++ + +
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ L+N D+ L++ M + G + D+ +YN LL C A E++
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF--- 457
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + +GV D +T +T++ + AL + E M + P+ +T+++L++
Sbjct: 458 KEMVERGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+A L+ +M+ P+ +IL+ AFRL W
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL---WD---------- 563
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
E K+K KPT T N ++K +
Sbjct: 564 ------------EMKEK----------------------GIKPTLVTCNTIIKGYLRAGN 589
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ +N M + G+ P+ I++ LI++ N + A ++ M E G+ P++V Y
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ R R+++A + +M I P+ TY +L+ Y S +++ V+ +M
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING---YVSKDNMKEAFRVHDEML 706
Query: 649 KAGYKANDTY 658
+ G+ +D +
Sbjct: 707 QRGFVPDDKF 716
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 34/303 (11%)
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + LI A + + F+ + + G + CN LL A V+ D A++++
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 459 ----------WTLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSH--- 501
+TL+ AL +D G D + S ME K + T N + N++
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKD--GKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 502 ------YSSFD--KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISW 551
+ D KP TYN L+ C + Y R K +++EM VGL PN ++
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332
Query: 552 T-ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+L+++C +V A ++ M + G+ PD++++++ + V R+ L +A + FE+MK
Sbjct: 333 NPMLVESCRKE-DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGV 670
+ P+ V Y L+ R +V L + +M + G + L+ C G
Sbjct: 392 GVGLVPDTVIYTILINGYCRN---DDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK 448
Query: 671 IQD 673
+ D
Sbjct: 449 MLD 451
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 170/430 (39%), Gaps = 68/430 (15%)
Query: 215 CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
C+ P F V KK ++ + R +D K PN++ I G+C +
Sbjct: 290 CLCPDVTT-FNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ--GLCKEGSL 346
Query: 275 SRAIY-------EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
RA+ E LR VT N + + + E M G + +Y
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE---ECLHKMVNGGFEPNDFTY 403
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C G V A I +K KG K D FTY ++V F A+ V +
Sbjct: 404 NSIIDGYCKKGMVVDANRI---LKDAVFKG-FKPDEFTYCSLVNGFCQDGDPDQAMAVFK 459
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
D L G+ P+ I +++LI GL+ A+ L EM + GC+P+ N+++ C
Sbjct: 460 DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMG 519
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C +S+ H +IT
Sbjct: 520 C-------------------------------LSDANHLIGDAITK-------------- 534
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C A L+N M + G++P+ I++ L++ +
Sbjct: 535 ---GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ++I K M E G +P+++ Y T I+ SK++ +A L EMK + P++V++ TL
Sbjct: 592 EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651
Query: 625 LRARSRYGSL 634
+ + G L
Sbjct: 652 ITGFCKVGDL 661
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 178/410 (43%), Gaps = 27/410 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAY-DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D + + + + KK +V A R DA K C + C GD ++ A++
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD-GDPDQAMAVF 458
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+D + + +I V+N+L+ + L++ M + G D+ +YN+++ C
Sbjct: 459 KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + G+ KG + D+FTY+T+V + A+++ M S G+TP+
Sbjct: 519 GCLSDANHLIGDAI---TKGCIP-DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 574
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
IT+++L+N E+ M +F+ M + GC PN N ++++ + + + A L
Sbjct: 575 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634
Query: 457 --RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+S L+ V+ G G ++ +++ + +K++ T
Sbjct: 635 EMKSKGLTPDVVSFGTLITGFC-KVGDLDG-------------AYGLFRGMEKQYDVSHT 680
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TYNI++ A A L +EM+ G P++ ++ +LID +GNV + L
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E G P + + + ++++A + M I P+ V I
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTI 790
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 179/470 (38%), Gaps = 37/470 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
+E + N ++Y +N++MN+ F +VY M+ V +D+ +Y I +K+ C
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCR 237
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A + ++++ G + Y T+V F + A ++ ++ML + P
Sbjct: 238 TGRPYAALRL---LRNMPVLGCFS-NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL- 455
+ T++ L++A G V ++ LF+++L+ G PN NI +Q + DRA RL
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353
Query: 456 -------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
R ++ V G HK +F NS + K+
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413
Query: 509 F---------------SFKPTTTTYNILMKACCTDY--YRVKALMNEMRTVGLSPNHISW 551
FKP TY L+ C D + A+ + GL P+ I +
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
LI G + ALQ++ M E G PD+ Y I + L A L +
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
P++ TY TL+ R L + + MW G + L+ C+
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSA---IELVNRMWSQGMTPDVITYNTLLNGLCKTA- 589
Query: 672 QDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTK 721
K++ E+ P + + L S N A+DL G K
Sbjct: 590 --KSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 173/405 (42%), Gaps = 27/405 (6%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMAS 326
GD ++R +++++ + ++ FN L++ F LE ++ + K GV ++ +
Sbjct: 274 GDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK-GFVLESERLFDKVLKRGVCPNLFT 332
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+NI ++ C G+ A + G V ++ L+ DV TY+T++ A +
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCV----SREGLRPDVVTYNTVICGLCRKSRVVEAEECL 388
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M++ G PN T++S+I+ G+V A + ++ + G +P+ L+ +
Sbjct: 389 HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD 448
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSF 505
D+A +F+ D G R S + + + + +P +
Sbjct: 449 GDPDQAMAVFK-------------DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
KP TYN+++ C A L+ + T G P+ ++ L+D
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A++++ M GM+PDV+ Y T + ++ + ++ +F+ M PN++TY T
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + ++E L +M G + LI +C+
Sbjct: 616 IIESLCNSKKVNEAVDLLG---EMKSKGLTPDVVSFGTLITGFCK 657
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 158/421 (37%), Gaps = 85/421 (20%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKA---- 333
YED+ +N+ L+ K TL YK+M QKLG LL
Sbjct: 97 YEDVCIRNL--------QLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN 148
Query: 334 ---CCLAGNTVLAQEIYGE-------VKHLEAKGVLKLD--VFTYSTIVKVFADAKWWQM 381
L G V A YG V E + D V++Y+ I+ + + ++
Sbjct: 149 LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQ 208
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M V + T++ I + G A+ L M GC N+
Sbjct: 209 AHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNA-------- 260
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
V C F F G+ DR +
Sbjct: 261 --VAYCTVVTGFYEF-----------------GDNDRAREL------------------- 282
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
FD+ P TT+N L+ A C + +++ L +++ G+ PN ++ I I
Sbjct: 283 ---FDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQG 339
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+++ A+++L + +G+ PDVV Y T I R R+ +A +M + +PN
Sbjct: 340 LCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 399
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
TY +++ + G + + + L +D G+K ++ L+ +C QD + +
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRIL---KDAVFKGFKPDEFTYCSLVNGFC----QDGDPD 452
Query: 678 Q 678
Q
Sbjct: 453 Q 453
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 181/472 (38%), Gaps = 98/472 (20%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL- 599
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 600 ----------------------------------KQAFSLFEEMKHYQIQPNLVTYITLL 625
+A+ L M+ PN+VTY ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+G +V +CL + + M G N + LI C G++ D +Q
Sbjct: 784 DG---FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 175/446 (39%), Gaps = 59/446 (13%)
Query: 263 IDVCGICG-------DYMK-SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
I + GICG D ++ + Y ++ +V LN ++L KF +
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G + D ++Y+ ++ C A A ++ E+K + V+ DVFTY+ ++
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK---SNHVVP-DVFTYTILIDS 524
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F Q A K ++M+ G PN +T+++LI+A A + A LFE ML GC PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 433 SQCCNILLQACVEACQFDRA-------------------FRLFRSWTLSKTQVALGEDYD 473
L+ ++ Q ++A F++ G D
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------SFKP 513
G E +D + + PN Y + F + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ D AL ++ M +PN I +T +ID G + A +++
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+M E G P+VV YT I ++ ++ + L +M PN VTY L+
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824
Query: 632 GSLHEVQQCL-AVYQDMWK---AGYK 653
G L + Q L + Q W AGY+
Sbjct: 825 GLLDDAHQLLDEMKQTYWPKHMAGYR 850
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 83/391 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTDYYRVKAL---------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
C + ++ +L EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGN-EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM 472
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L
Sbjct: 473 SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLL- 531
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
QQ + +M + G N LI +
Sbjct: 532 --QQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 148/355 (41%), Gaps = 22/355 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI+ + +L++ AH +K ++ M G + Y+ L+ C G AQ ++
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + +G +V+TYS+++ K +ALKV ML PN I ++ +I+
Sbjct: 695 TK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G ++A L M + GC PN ++ +A + D+ L R A
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG------A 804
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILMKACC 526
G + T R+ + H + ++H + + ++ P Y +++
Sbjct: 805 KGCAPNFVTYRVL-INH------CCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN 857
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVV 584
++ L++E+ P ++ ILID+ +G +E AL++ K M + D
Sbjct: 858 REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKD 917
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y++ I+ + ++ +AF L+ +M P L + L++ R E Q
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN + +ID G C G +++ ++ + + N+Y ++SL++ D L L
Sbjct: 669 PNHIVYDALID--GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M + ++ Y ++ C G T E Y + +E KG +V TY+ +
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKT---DEAYRLMSMMEEKGC-HPNVVTYTAM 782
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ F A L++ M + G PN +T+ LIN C AGL++ A L +EM Q
Sbjct: 783 IDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 240/559 (42%), Gaps = 55/559 (9%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
I S+REG+++ G ++ GV D + ++ + DS V +
Sbjct: 231 IRASMREGKLEEAEGWFREAKNKGVE----LDARAYSIVIEAVCKKPDS------VAALG 280
Query: 180 VLEEFR----LPVKELDEEFRIVQLCVNKPDVNLAIR-----YACIVPRADILFCNFVRE 230
+L E R +P + + R++ +C+ + + A++ +C P ++ ++
Sbjct: 281 LLREMRDKGWVPHEVIFT--RVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKG 338
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ K+ DL SAL +D ++ PN II+ C G+ K+ IY +++++++
Sbjct: 339 YCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPT 398
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ NSL+ + A + +++ G+ A++ +YN LL C G A I+
Sbjct: 399 VFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIW- 456
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + KGV + V +Y+ ++ A V +ML G+ PN IT+S L++
Sbjct: 457 --EKMVRKGV-RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF----DRAFRL----FRSWT 460
G E A L++ M P+ CNI++ +A + DR +L F
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-----NSHYSSFDKRFSFKP-- 513
++ + G +G+ + + + + I +PN N S + + K
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAV-YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMD 632
Query: 514 ---------TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
T Y L+ C D L++E++ VGLSPN + ++ +I
Sbjct: 633 EMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQ 692
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E AL + K M +G+ D+ YTT I ++ +L A L+ EM I P+L+TY
Sbjct: 693 NMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYS 752
Query: 623 TLLRARSRYGSLHEVQQCL 641
L+ G L Q+ L
Sbjct: 753 VLIHGLCNKGQLENAQKIL 771
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 201/492 (40%), Gaps = 60/492 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D V+AL + P+ I +I VC G +++ + ++ S +N+
Sbjct: 271 KKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVV 330
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V +LM DL LE++ M + G+ + +Y ++++ CC GN A EIY ++
Sbjct: 331 VATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQM 390
Query: 351 KHLEA-----------KGVLKL-------------------DVFTYSTIVKVFADAKWWQ 380
K+ + +G LK +VFTY++++
Sbjct: 391 KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMS 450
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M+ GV P+ ++++++I G ++ A +F EML+ G +PN ++L+
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510
Query: 441 QACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+ + AF L+ R ++ + +G E +D+ F+
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFI 570
Query: 498 P------------------NSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
P NS + + + + P TY L+ C AL
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M+EM+ G+ + + LID G++ A Q+L ++E G+SP+ V Y++ I +
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ ++ A L + M + I +L Y TL+ + G L + +Y +M G +
Sbjct: 691 LQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE---LYAEMLAKGIMPD 747
Query: 656 DTYLKELIEEWC 667
LI C
Sbjct: 748 LITYSVLIHGLC 759
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 208/499 (41%), Gaps = 53/499 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
++R +Y + S+ V + + ++ + + K ++ + GV D +Y+I++
Sbjct: 207 EARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVI 266
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+A C ++V A G ++ + KG + +V I K + A+KVK +MLS
Sbjct: 267 EAVCKKPDSVAA---LGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLE-AVKVKGEMLS 322
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G N + ++L+ G ++ A+ LF++M + G PN+ ++++ C + D+
Sbjct: 323 CGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDK 382
Query: 452 AFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHK---DKQSITNTPN-FVPNSHYSS 504
A+ ++ ++ +S T + G S E D+ N F NS S
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSW 442
Query: 505 FDK---------------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
K R +P+ +YN ++ C D + EM GL PN
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++++L+D G+ E A + MR + ++P I ++ R ++ +
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ P +TY ++ + GS V LAVY +M K G N LI +C
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGS---VNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619
Query: 668 EG-------VIQDKNQNQG---EVTL--------CRRTNSQRPQSLL--LEKVAVHLQKS 707
+ + D+ +N+G +VT+ CR+ + LL L++V + K
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679
Query: 708 AAENLAIDLRGLTKVEARI 726
++ R L +EA +
Sbjct: 680 VYSSMISGFRKLQNMEAAL 698
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 160/380 (42%), Gaps = 30/380 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C GD + ++ ++ + + N+ ++ LM+ D ++ +Y M+ +
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ NI++ C AG T +Q+ +K L +G + TY+ I+ F
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQD---RLKKLVQEGFIPT-CMTYNCIIDGFVKEGSVN 590
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V +M GV+PN T+++LIN + ++ A+ + +EM G E + L+
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650
Query: 441 QACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNME---HKDKQSITNTP 494
A +L + LS +V G ++ NME H K+ I
Sbjct: 651 DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG-FRKLQNMEAALHLHKRMINEG- 708
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+P + TT + L+K L EM G+ P+ I++++L
Sbjct: 709 --IP----------CDLQIYTTLISGLLKE--GKLLFASELYAEMLAKGIMPDLITYSVL 754
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G +E A +IL+ M M+P V Y T I + L++AF L EM +
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814
Query: 615 QPNLVTYITLLRARSRYGSL 634
P+ TY L+ + + G+L
Sbjct: 815 VPDDTTYDILVNGKVKDGNL 834
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ N + F K ++ AL+ D K ++ + +ID G C GD + + + +
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID--GFCRKGDMVNASQLLSE 668
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ ++ N V++S+++ +++ L ++K M G+ D+ Y L+ G
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A E+Y E + AKG++ D+ TYS ++ + + A K+ EDM +TP
Sbjct: 729 LLFASELYAE---MLAKGIMP-DLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVF 784
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++LI G +++A L EML G P+ +IL+ V+
Sbjct: 785 IYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++C + F +K D+V+A + ++ SPN + ++I + + +++ +
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + ++ ++ +L++ + L F E+Y M G+M D+ +Y++L+ C G
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
AQ+I ++ + + VF Y+T++ Q A ++ +ML G+ P+ T
Sbjct: 765 ENAQKILEDMD----RKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820
Query: 401 WSSLINACANAG 412
+ L+N G
Sbjct: 821 YDILVNGKVKDG 832
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 171/399 (42%), Gaps = 56/399 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P ++++ + F K + +A + +D SP+ T+I G G ++
Sbjct: 359 IIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ ++ S+ + + + +L++V A ++ ++ M ++G+ ++ +Y L+
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ E++ K L+L+V Y+++V A + A+K+ ++M AG
Sbjct: 478 LCKHGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ IT++++I+A G +++A L +EML G +P N+L+ +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL W L K V P
Sbjct: 594 RLL-GWMLEKGIV----------------------------------------------P 606
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN LMK C + MR G++P+ ++ ILI + N++ A +
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
K M E G P V +Y IK + ++ +A LFEEM+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 180/413 (43%), Gaps = 22/413 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
G ++R + + L S + + + N+ ++ A++ + K + G+ + SYNI
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNI 263
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ + C G A + ++ + DV +YST++ + + ALK+ +DM
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTP----DVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ PN T++S+I G +A + EM+ P++ L+ +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F LSK + DY T I K P + + R
Sbjct: 380 RTANKWFDE-MLSK---KISPDYITYTTLIQGFGQGGKV-------IEPQNLFHEMISR- 427
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TY L+ C V A L NEM +G++PN +++ LID G ++ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L MR+ G+ +V Y + + ++ ++QA L +EM+ I P+ +TY T++ A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQG 679
R G + + + L Q+M G + L+ +C G+++D ++ G
Sbjct: 548 YCRLGDIDKAHKLL---QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 184/424 (43%), Gaps = 33/424 (7%)
Query: 252 SSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK-FT 308
S+P++ T+ID G C G+ K+ + +D++ + + N Y +NS++ + K F
Sbjct: 289 STPDVVSYSTVID--GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 309 LE-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E V + M ++ D Y L+ G+ A + + E+ L K + D TY+
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM--LSKK--ISPDYITYT 402
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ F + +M+S G+ P+ +T+++LI+ AG + A L EM+Q
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHK 485
G PN L+ + + D A L Q V + + N+E
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVG 543
K + + D P TY ++ A C D + L+ EM G
Sbjct: 523 IK--------LMKEMEVAGID------PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV-CVRSKRLKQA 602
L P +++ +L++ G +E ++L M E G+ PD + Y T +K C+R+ +
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS-MNTT 627
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+++ M++ + P+ TY L++ + +L E +Y++M + GY T L
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW---FLYKEMIEKGYVPTVTSYNAL 684
Query: 663 IEEW 666
I+ +
Sbjct: 685 IKRF 688
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 176/396 (44%), Gaps = 31/396 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D RS T ++ ++++++ H +LK L++ +MQ G+ + +YN ++ C G
Sbjct: 285 DFRSS--TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG 342
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A+++ ++ + ++ ++ D Y+T++ F + A K ++MLS ++P+
Sbjct: 343 KSFEAEKV---LREMMSQKIIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI G V + +LF EM+ G +P+ L+ +A + AF L
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 459 WT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ V G DG K +T N + + ++ +
Sbjct: 459 MVQMGMTPNIVTYGALIDGLC----------KHGELDTANELLDEM-----RKKGLQLNV 503
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN ++ C + + LM EM G+ P+ I++T +IDA G+++ A ++L+
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M + G+ P VV + + L+ L M I P+ +TY TL++ S
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++ + +Y+ M G + LI+ C+
Sbjct: 624 MNTTTK---IYKRMRNQGVAPDSNTYNILIKGHCKA 656
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 22/354 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + ++ FG+ ++ + P+ T+IDV G+ + + +++ +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +T NI + +L++ +L E+ M+K G+ ++ YN ++ C AGN
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K +E G+ D TY+T++ + A K+ ++ML G+ P +
Sbjct: 519 IEQAIKL---MKEMEVAGI-DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFRS 458
T++ L+N G++E L ML+ G P++ N L+ Q C+ + +
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS-------MNTT 627
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ K G D NT I H +++ Y ++ + PT T+Y
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL-----YKEMIEK-GYVPTVTSY 681
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
N L+K + + L EMR GL + + +D C G+VE L +
Sbjct: 682 NALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 186/460 (40%), Gaps = 57/460 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+P + I+D Y + ++ L + + ++ N L+N H + F
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAG---------NTVLAQE-----------IYGEV 350
V + K G D + N L+K CL G + +LAQ I G
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 351 KHLEAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
K + +G +KL +V YSTI+ + A + +M G++ + +
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLF 456
T+S+LI G +++A+ L EM+ PN NIL+ A + + A +
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + DG E K Q + N + + P
Sbjct: 296 LKACVKPDVITYSTLMDG---YFLVYEVKKAQHVFNAMSLM------------GVTPDVH 340
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + +AL EM + P ++++ LID SG + ++ M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R+ G DV+ Y++ I ++ L +A +LF +MK +I+PN+ T+ LL + G L
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ Q+ V+QD+ GY N +I C +G++++
Sbjct: 461 KDAQE---VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 172/399 (43%), Gaps = 24/399 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 127 PDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + ++ Y+ ++ A C L E YG + KG+ DV TYST+
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALC---KYQLVSEAYGLFSEMTVKGI-SADVVTYSTL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + PN T++ L++A G V++A + ML+A
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ + L+ + +A +F + +L +G D +T I +
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL------MGVTPDVHTYTILINGFCKNKM 354
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+ N H + P TY+ L+ C V L++EMR G +
Sbjct: 355 VDEALNLFKEMHQKNM------VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPAD 408
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ LID +G+++ A+ + M++ + P++ +T + + RLK A +F+
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ N+ TY ++ + G L E L+ +D
Sbjct: 469 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 170/408 (41%), Gaps = 62/408 (15%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 172 NGVCKIGDTRGAIKLLRKIDG---RLTKPNVEMYSTIID--ALCKYQLVSEAYGLFSEMT 226
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +++L+ LK + + M + ++ +YNIL+ A C G
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K DV TYST++ + + A V M GVTP+ T+
Sbjct: 287 EAKSVLA----VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN +V++A++LF+EM Q P + L+ ++ R+ W
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC------KSGRIPYVW-- 394
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D I M + + + TY+ L
Sbjct: 395 ---------------DLIDEMRDRGQPA------------------------DVITYSSL 415
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + R AL N+M+ + PN ++TIL+D G ++ A ++ + + G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+V Y I + L++A ++ +M+ PN T+ T++ A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 121/248 (48%), Gaps = 11/248 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC+ P I + + + ++ A ++A +P+++ +I+ G C + M
Sbjct: 298 ACVKPDV-ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 274 KSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ ++++ +N+ I ++SL++ + + + ++ M+ G AD+ +Y+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G+ A ++ ++K E ++ ++FT++ ++ + A +V +D+
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L+ G N T++ +IN GL+E+A+ + +M GC PN+ ++ A + +
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 450 DRAFRLFR 457
D+A +L R
Sbjct: 531 DKAEKLLR 538
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P + ++ID G+C G + +++R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRIPYVWDLIDEMRD 402
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++SL++ N H L + ++ M+ + ++ ++ ILL C G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGH-LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG L+V+TY+ ++ + AL + M G PN T+
Sbjct: 462 DAQEVFQD---LLTKGY-HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
++I A ++A L +M+ G
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMK--ACCTDYYRVKALMNEM 539
H SI N + V S F++ + P +N ++ A Y +L + +
Sbjct: 31 HSQPPSIQNVDDAV-----SQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I+ ILI+ G + +L + + G PD V T IK ++
Sbjct: 86 ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K+A +++ Q N V+Y TL+ + G
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 195/456 (42%), Gaps = 41/456 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ T++ G ++R + ++ + + +N+L++ A +K
Sbjct: 242 SPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATN 301
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G D+ +YN+L C AG A ++ E++HL ++ DV TY+T+V
Sbjct: 302 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL---SIVSPDVVTYNTLV 358
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL + E+M GV + +T + ++ G +E+A+ + M + G
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDK 487
P+ N L+ A +A +AF L S ++ + + NT + +++
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM---DTFTLNTLLYNLCKEKRYEEA 475
Query: 488 QSITNTP---NFVPNS---------------------HYSSFDKRFSFKPTTTTYNILMK 523
+ + +P FVP+ + KR P+ TYN L+K
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR-KLTPSIYTYNTLIK 534
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT +A+ +NE+ GL P+ ++ I+I A G++E A Q M E+ P
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DVV T + +L++A LFE + +++TY TL++A + G +V L
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG---DVDTAL 651
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ DM G + + ++ E ++ QN
Sbjct: 652 HFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 54/336 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V ++L + + +L+V++++ L + + ++N+L+ C G LA + +
Sbjct: 179 VLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG--TLADAL-STLST 235
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ G L DV TY+T++K A + M G+ P T+++L++A A G
Sbjct: 236 MQGFG-LSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLG 294
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++QA ++ E M G EP+ N+L +A + D AF+L
Sbjct: 295 WIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL----------------- 337
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
MEH SI + P TYN L+ AC Y R
Sbjct: 338 ------KDEMEH---LSIVS--------------------PDVVTYNTLVDACF-KYQRS 367
Query: 533 KALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+N EMR G+ + ++ I++ G +E AL LK+M E+G++PDV+ Y T
Sbjct: 368 SDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTL 427
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I +++ + +AF L +EM ++ + T TLL
Sbjct: 428 IDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 158/415 (38%), Gaps = 91/415 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID + K+ + +++ + ++ + N+L+ + ++ E
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 477
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++ + G + D SY ++ A A ++ E+ +K L ++TY+T++
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM----SKRKLTPSIYTYNTLI 533
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A+ +++ G+ P+ T++ +I+A G +E+A +ML+ +
Sbjct: 534 KGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFK 593
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ CN L+ + ++A +LF SW +V +
Sbjct: 594 PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV---------------------- 631
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
TYN L++A C D AL +M GL P+
Sbjct: 632 -------------------------ITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGM---------------------SPDVVA-- 585
++ +++ A +G E A +L + E G P+V +
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDC 726
Query: 586 -------------YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y ++K +LK+A ++ +EM + + TYITL+
Sbjct: 727 ESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTV---GLSPNHISWTILIDACG 559
SF +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 162 SFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHC 221
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPDVV Y T +K R L +A +L MK I P
Sbjct: 222 SKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRA 281
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY TL+ A +R G ++Q V + M G++ +
Sbjct: 282 TYNTLVSAYARLGW---IKQATNVVEAMTAFGFEPD 314
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P TYN L+KA C + L+ M+ G++P ++ L+ A G ++
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLL 625
A +++ M G PD+ Y ++ ++ +AF L +EM+H I P++VTY TL+
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
A +Y L + ++M G K++ +++ C EG +++
Sbjct: 359 DACFKY---QRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
++ +P+ P + F + + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 182 ALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGL 241
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L+ A G + A +L M+++G++P Y T + R +KQA +
Sbjct: 242 SPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATN 301
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M + +P+L TY L + G + E
Sbjct: 302 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 334
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 148/330 (44%), Gaps = 26/330 (7%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
+S+++ +V G+ REG+++ +G LK + E G+AP + + L+ C+
Sbjct: 384 SSLVTHNIVVKGLC---REGQLEEALGRLKMMTEEGLAPDVITYNT---LIDAYCKA--- 434
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK--PDVNLAIRYAC---IVPRADI 222
+ FV LM+ + L + + LC K + +R VP ++
Sbjct: 435 RNVAKAFV-LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPD-EV 492
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYE 280
+ + + K+ AL +D K +P++Y T+I G+C G ++
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK--GLCTIGKLTEAIDKLN 550
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+L + + + +N +++ DL+ + + M + D+ + N L+ CL G
Sbjct: 551 ELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHG 610
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + KG K+DV TY+T+++ AL DM + G+ P+
Sbjct: 611 KLEKAIKLF---ESWAEKGK-KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAG 428
T++ +++A + AG E+A ++ ++ ++G
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 107/234 (45%), Gaps = 10/234 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D + + + K+ DL A + ++ ++ P++ C T+++ + G K+
Sbjct: 557 LVPD-DTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++E + +++ +N+L+ D+ L + +M+ G+ D +YN++L A
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG + AQ + + L+ G L + F+Y I + K + +VK D S G
Sbjct: 676 LSEAGRSEEAQNM---LHKLDESGKLS-ERFSYPLIKSSAEEVKTGKDP-EVKSDCESGG 730
Query: 394 VTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ +++ + G +++A + +EM+Q G +S L++ ++
Sbjct: 731 NAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 197/456 (43%), Gaps = 37/456 (8%)
Query: 203 NKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTI 262
N PDV + Y+ IV +C V + GK L+ L+ +K L PN Y +I
Sbjct: 283 NVPDV---VSYSVIVDG----YCQ-VEQLGKVLKLMEELQ-----RKGLK-PNQYTYNSI 328
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGV 320
I G +++ + +++Q + + V+ +L++ ++E ++ M++ +
Sbjct: 329 ISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI 388
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D +Y ++ C AG V A++++ E + +KG LK D TY+ ++ + A +
Sbjct: 389 VPDFVTYTSMIHGLCQAGKVVEARKLFSE---MLSKG-LKPDEVTYTALIDGYCKAGEMK 444
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + M+ G+TPN +T+++L++ G V+ A L EM + G +PN N L+
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++A +L L+ D I+ D
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGF----------FPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
DK +PT T+N+LM C + L+ M G+ PN ++ L+
Sbjct: 555 LRIMLDK--GLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
N+ ++I K M G+ PD Y IK +++ +K+A+ L +EM
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+Y +L++ + E ++ ++++M G+ A
Sbjct: 673 ASYNSLIKGFYKRKKFEEARK---LFEEMRTHGFIA 705
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 23/377 (6%)
Query: 301 NAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
N+ D ++ V++ ++GV + SYNI+L C G +E + + +E +G +
Sbjct: 228 NSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGK---VKEAHSLLIQMEFRGNV 284
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV +YS IV + + LK+ E++ G+ PN T++S+I+ G V +A
Sbjct: 285 P-DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ M P++ L+ ++ ++LF K + D+ T I
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK----IVPDFVTYTSMI 399
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
+ K V S KP TY L+ C + +L N
Sbjct: 400 HGLCQAGK--------VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M GL+PN +++T L+D G V+ A ++L M E G+ P+V Y I +
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++QA L EEM P+ +TY T++ A + G + + + L + M G +
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRI---MLDKGLQPTIV 568
Query: 658 YLKELIEEWC-EGVIQD 673
L+ +C G+++D
Sbjct: 569 TFNVLMNGFCMSGMLED 585
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 161/397 (40%), Gaps = 63/397 (15%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R D+ S +V ++ Y L L++ + +Q+ G+ + +YN ++
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYC-------QVEQLGKVLKLMEELQRKGLKPNQYTYNSIIS 330
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G V A+++ +K+ + D Y+T++ F + + K+ ++M
Sbjct: 331 FLCKTGRVVEAEQVLRVMKNQR----IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ P+ +T++S+I+ AG V +A LF EML G +P+ L+ +A + A
Sbjct: 387 KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEA 446
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F L H TPN V
Sbjct: 447 FSL----------------------------HNQMVEKGLTPNVV--------------- 463
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
TY L+ C + L++EM GL PN ++ LI+ GN+E A+++
Sbjct: 464 ----TYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ M G PD + YTT + + + +A L M +QP +VT+ L+
Sbjct: 520 MEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCM 579
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G L + ++ + + M G N T L++++C
Sbjct: 580 SGMLEDGERLI---KWMLDKGIMPNATTFNSLMKQYC 613
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 165/399 (41%), Gaps = 64/399 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ E+L+ + + N Y +NS+++ + + L V KN + + D Y L+
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR---IFPDNVVYTTLIS 365
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+GN + +++ E+K K ++ D TY++++ A A K+ +MLS
Sbjct: 366 GFGKSGNVSVEYKLFDEMKR---KKIVP-DFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +T+++LI+ AG +++A L +M++ G PN L+ + + D A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L + M K Q
Sbjct: 482 NEL-----------------------LHEMSEKGLQ------------------------ 494
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C + + LM EM G P+ I++T ++DA G + A ++
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+IM + G+ P +V + + S L+ L + M I PN T+ +L++ +
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK---Q 611
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
Y + ++ + +Y+ M G + LI+ C+
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 22/322 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ +ID G+ ++ +++ + + +T N+ + +L++ ++ E+
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G+ ++ +YN L+ C GN A ++ E ++ G D TY+TI+
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE---MDLAGFFP-DTITYTTIMD 540
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ ML G+ P +T++ L+N +G++E L + ML G P
Sbjct: 541 AYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Query: 432 NSQCCNILL-QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
N+ N L+ Q C+ + + + K A G D NT I H +++
Sbjct: 601 NATTFNSLMKQYCIRN-------NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
H +K FS T +YN L+K + + L EMRT G
Sbjct: 654 KEAWFL----HKEMVEKGFSL--TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEK 707
Query: 549 ISWTILIDACGGSGNVEGALQI 570
+ I +D GN E L++
Sbjct: 708 EIYDIFVDVNYEEGNWENTLEL 729
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 102 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-QPNVITHNI 157
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + + DRA +E+ D
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRA-----------------------------IEYLD-- 246
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
I + P+ TYN L+ A C D A ++N++ + G SP
Sbjct: 247 -IMVSRGCYPD---------------IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 290
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G E A+++L MR G+ PD++ Y++ + R ++ +A F
Sbjct: 291 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 350
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ I+PN +TY +++
Sbjct: 351 HDLEGLGIRPNAITYNSIM 369
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 168/413 (40%), Gaps = 59/413 (14%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
N Q L ++ ++ ++ C A ++ E+++ KG K DV TY+ ++
Sbjct: 72 NQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRN---KGS-KPDVVTYNVLINGI 127
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A+K +M S G PN IT + ++ + + G A L +ML+ GC P+
Sbjct: 128 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 187
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
NIL+ RA + + T
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGC----------------------------T 219
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
PN + +YN L+ C + +A+ ++ M + G P+ +++
Sbjct: 220 PN-------------------SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+ A G V+ A++IL + G SP ++ Y T I + + ++A L +EM+
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
++P+++TY +L+ SR G +V + + + D+ G + N ++ C+
Sbjct: 321 KGLKPDIITYSSLVSGLSREG---KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 672 QDKNQNQGEVTLCRRTN-SQRPQSLLLEKVAVHLQKSAAENLAIDL--RGLTK 721
D+ + + +R ++ ++L+E +A A +L +L RGL K
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 430
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 113 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 172
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 173 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 230
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 231 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 287
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 288 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 346
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 347 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 391
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 320
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 321 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEG 406
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 184/435 (42%), Gaps = 44/435 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S +Y ++S ++ ++ + L++ F L + +M +L + ++NI+L
Sbjct: 433 HATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIML 490
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG A E+ ++ A TY+T++ F Q AL + +M
Sbjct: 491 RHLCSAGKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ PN T+ ++I+ G V++A+ +F+EML G +P + N L+ + +
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNF 496
D A L+R + + Y DG + + M K T N
Sbjct: 603 DTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661
Query: 497 VPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ N H + + +R + T TY L+ A L +E
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L +EM IQP+LVTY TL+ S G +V+ L + +M G+ L
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKGFNPTLLTYNAL 837
Query: 663 IEEWCEGVIQDKNQN 677
I+ C+ D +N
Sbjct: 838 IQGLCKNGQGDDAEN 852
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 547 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 606
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 607 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 662
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 755
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 756 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 855
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 856 EMVENGITPDDSTYISLIEG 875
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 193/451 (42%), Gaps = 85/451 (18%)
Query: 248 KKHLSSPNMYICRTIIDVC--GICGDYMKSRAIYEDL-RSQNV-TLNIYVFNSLMN--VN 301
K+ +S + + ++ +C G+ G+ + A+ E L R + + L++ +N+L++
Sbjct: 143 KRGVSWDGVTVSTALVGLCRTGLVGE---AAALAEMLVRGRGIDGLDVVGWNALIDGYCK 199
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
D+ L V + M GV D+ YN L+ +G+ A E+ V+ ++A GV +
Sbjct: 200 VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEV---VERMKADGV-EP 255
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V TY+ ++ + K A + E M+ +GV P+ +T S+L++ G +A LF
Sbjct: 256 NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALF 315
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G PN L+ + +A + + L +S+ V Y DR+
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM-VSRGVVMDLVMYTALMDRLGK 374
Query: 482 ----MEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
E KD QS TPNFV
Sbjct: 375 EGKIEEAKDVLRHAQSDNITPNFV------------------------------------ 398
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++T+L+DA +GN++GA Q+L M E + P+VV +++ I
Sbjct: 399 ----------------TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
V+ L +A +MK I PN+VTY TL+ ++ + L VY+DM G +
Sbjct: 443 VKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF---QGQEAALDVYRDMLHEGVE 499
Query: 654 ANDTYLKELIE--------EWCEGVIQDKNQ 676
AN+ + L+ E E + +D ++
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDE 530
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 175/425 (41%), Gaps = 35/425 (8%)
Query: 254 PNMYICRTIID------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ +II+ G DYM+ ++ + N+ + +L++
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRK------MKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ L+VY++M GV A+ + L+ GN A+ ++ K ++ +G+L LD
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALF---KDMDERGLL-LDHVN 539
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A KV ++++ ++P+ + ++ IN G +A +EM
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G EP+ N ++ A + +A +L + + + L T + +E
Sbjct: 600 NTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL---ITYTTLVVGLLE-- 654
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVG 543
+ F+ N S+ F PT+ T+ +++AC + + M G
Sbjct: 655 --AGVVKKAKFLLNEMASA-----GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAG 707
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + + L+ G A +L M G++PD + + I +S L AF
Sbjct: 708 LHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+++ +M H + PN+ T+ TLL G + E L+ DM K G + N+ L+
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS---DMKKVGLEPNNLTYDILV 824
Query: 664 EEWCE 668
+ +
Sbjct: 825 TGYAK 829
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 189/457 (41%), Gaps = 58/457 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K + +AL Y N ++ ++++ G+ + A+++D
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + L+ + +LM+ ++ +V + + + + D YN+ + C G
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGK 587
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ E+++ L+ D TY+T++ ALK+ ++M + PN I
Sbjct: 588 FSEAKSFLKEMRNTG----LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ AG+V++A L EM AG P S +LQAC + + D +
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIH--- 700
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +G H D T YN
Sbjct: 701 -----ELMMGAGL-----------HAD----------------------------ITVYN 716
Query: 520 ILMKA-CCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ CC R +++EM T G++P+ I++ LI S +++ A I M
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+SP++ + T + + R+ +A ++ +MK ++PN +TY L+ + Y
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV---TGYAKKSNK 833
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ L +Y +M G+ + L+ ++ + + ++
Sbjct: 834 VEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQ 870
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/424 (18%), Positives = 164/424 (38%), Gaps = 82/424 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
SP+ + I+ G + ++++ +++R+ + + +N+++ + K + L+
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ-------------------------- 344
+ K M++ + ++ +Y L+ AG A+
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACS 688
Query: 345 -----EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ E+ L L D+ Y+T+V V + A V ++ML+ G+ P+TI
Sbjct: 689 GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI 748
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + ++ A ++ +ML G PN N LL + A R+ +
Sbjct: 749 TFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG------LESAGRIGEAD 802
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T+ +S+M K+ +P TY+
Sbjct: 803 TV-----------------LSDM------------------------KKVGLEPNNLTYD 821
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ +V+A L EM + G P ++ L+ +G + A ++ M+
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ Y + + + + L ++MK +P+ T ++ RA SR G E
Sbjct: 882 GVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEA 941
Query: 638 QQCL 641
++ L
Sbjct: 942 RRLL 945
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
AIY + Q ++ NI FN+L+ +A + V +M+K+G+ + +Y+IL+
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N V A +Y E + +KG + TY++++ FA A A ++ +M GV
Sbjct: 828 AKKSNKVEALRLYCE---MVSKGFIP-KASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ T+ L+N + + L ++M + G +P+ + + +A A R
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943
Query: 455 LFRS 458
L ++
Sbjct: 944 LLKT 947
>gi|297798436|ref|XP_002867102.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297312938|gb|EFH43361.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1094
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 148/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 541 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 600
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D + L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 601 AEMKAETHPIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 656
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 657 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 716
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+ L K
Sbjct: 717 LGTVSYSSLMGACCNAKDWKKALELYEKIKLIK--------------------------- 749
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
+PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 750 --------------------LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 789
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L +EDG+SP+ + +C R
Sbjct: 790 ITYSMLMLASERKDDFEVSFKLLSQAKEDGISPNFIMCRCITSLCKR 836
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 453 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 512
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 513 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 568
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 569 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHITIGALMKACCNAG 628
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 629 QVERAKEVYQ------------------------MIHK---------------------- 642
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 643 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 701
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ V+Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 702 EAFGILQDAKSQGIRLGTVSYSSLMGACCNAKDWKKALELYEKIKLIKLRPTISTMNALI 761
Query: 626 RA 627
A
Sbjct: 762 TA 763
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--------DVFTYST 368
KL + M+++N+L+ C + Q+I G A+GVL+L D Y+T
Sbjct: 465 KLILNPTMSTFNMLMSVCASS------QDIEG------ARGVLRLVQESGMTADCKLYTT 512
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + +V M ++GV N T+ +LI+ CA AG V +A + +
Sbjct: 513 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 572
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N L+ AC ++ DRAF D ++ M+ +
Sbjct: 573 VKPDRVVFNALISACGQSGAVDRAF-----------------------DVLAEMKAE--- 606
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+H P T LMKACC R K + + G+
Sbjct: 607 -----------TH--------PIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRG 647
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+TI +++C SG+ + A I K M+E ++PD V ++ I V +K L +AF +
Sbjct: 648 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 707
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ K I+ V+Y +L+ A + + ++ L +Y+ + + + + LI
Sbjct: 708 QDAKSQGIRLGTVSYSSLMGACC---NAKDWKKALELYEKIKLIKLRPTISTMNALITAL 764
Query: 667 CEG 669
CEG
Sbjct: 765 CEG 767
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 595 RAFDVLAEMKAETHPIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 654
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 655 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 711
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + + P T ++LI A +
Sbjct: 712 SQGI-RLGTVSYSSLMGACCNAKDWKKALELYEKIKLIKLRPTISTMNALITALCEGNQL 770
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 771 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 812
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 45/436 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++RA+ ++ + +N+L++ A +K +
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V ++M G D+ +YN+L C AG A + E++ L DV TY+T+V
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALP---DVVTYNTLV 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ E+M GV P +T + ++ + G +E+A+ E++ + G
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNM----EH 484
P+ N L+ A +A +AF TL V G D T + N+ +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAF------TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 485 KDKQSITNTP---NFVPN---------SHYSSFDKRFSFK-----------PTTTTYNIL 521
+D + + ++P FVP+ +++ ++ + + P+ +TYN L
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C +A+ +NE+ GL P+ ++ I+I A G++E A + M E+
Sbjct: 531 IKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV T + +L +A LFE + +++TY TL+++ + G +V
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG---DVDT 647
Query: 640 CLAVYQDMWKAGYKAN 655
L + DM G + +
Sbjct: 648 ALHFFDDMEVKGLQPD 663
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 63/341 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ R + L++ N V ++L + + +L+V++++ +L + + ++N+L+
Sbjct: 163 RRRGVRPSLQAANA-----VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G + + ++ G L D TY+T++ A + M G
Sbjct: 218 HCSKGTLA---DALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P T+++L++A A G ++QA + E M G EP+ + N+L +A + D AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL +R+S T P+ V
Sbjct: 334 RL-----------------KDEMERLS----------TALPDVV---------------- 350
Query: 514 TTTTYNILMKAC-----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ AC +D R L+ EMR G+ P ++ I++ + G +E AL
Sbjct: 351 ---TYNTLVDACFKWRCSSDALR---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
L+ + E+G++PDV+ Y T I ++ + +AF+L +EM
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 172/443 (38%), Gaps = 61/443 (13%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+ K+ L AL + + +P++ T+ID G+ K+ + +++ + +
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 288 TLNIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + N+++ N +K E+ + + G + D SY ++ A N A
Sbjct: 451 KMDTFTLNTVL-YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ +E K L + TY+T++K + + A+ +++ G+ P+ T++ +
Sbjct: 510 RLWDQM--IERK--LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G +E A +M++ +P+ CN L+ + D+A +LF SW
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW----- 620
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G+ D TYN L+++
Sbjct: 621 -VEKGKKVD-----------------------------------------VITYNTLIQS 638
Query: 525 CCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C D ++M GL P+ ++ +++ A +G E A +L + + G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN-LVTYITLLRARSRYGSLHEVQQCL 641
A +K+ E + Q N L TY+ L G L E +
Sbjct: 699 SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAK--- 755
Query: 642 AVYQDMWKAGYKANDTYLKELIE 664
AV +M + G + + L+E
Sbjct: 756 AVLDEMMQKGMPVDSSTYITLME 778
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+++ +P+ +P + F + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+ DG++P Y T + R +KQA
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M Y +P+L TY L + G + E
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA 332
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTV---GLSPNHISWTILIDACG 559
S +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 160 SLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC 219
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY TL+ A +R G ++Q V + M G++ +
Sbjct: 280 TYNTLVSAFARLGW---IKQATKVVESMTAYGFEPD 312
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ + K+ DL +A R ++ ++ P++ C T+++ + G K+ ++E +
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+++ +N+L+ D+ L + +M+ G+ D +YN++L A AG + +
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS---E 681
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI-TWSS 403
E + + L G L F + AD + E S N + T+
Sbjct: 682 EAHNMLHKLADSGKLS-QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYME 740
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+N G +++A + +EM+Q G +S L++ ++
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 37/387 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 204
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 205 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 317
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 365
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 366 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE-- 482
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ M G N LI+ C+
Sbjct: 483 -VFDQMDLQGISRNAITFNTLIDGLCK 508
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 38/402 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I + +T N +V N L N H + L+V M + G D+ +YNI++ C
Sbjct: 278 IADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKN 334
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +E G + + +G L D+ T++T++ + AL + + GV+P+
Sbjct: 335 GQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ LINA G A+ LFEEM +GC P+ N L+ + +A L +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 458 ---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSSF-- 505
S ++ + DG RI E D Q I+ N F N+
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF--NTLIDGLCK 508
Query: 506 DKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
DK+ +P TYN ++ C D + ++ M G + ++
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
P+ +TY + R R G +++ +M G+
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGG--PIKEAFDFMLEMVDKGF 668
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 192/454 (42%), Gaps = 48/454 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + L + +DM G + +I+ C+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 37/387 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIM---L 204
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 205 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 317
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 365
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 366 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE-- 482
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ M G N LI+ C+
Sbjct: 483 -VFDQMDLQGISRNAITFNTLIDGLCK 508
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 38/402 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I + +T N +V N L N H + L+V M + G D+ +YNI++ C
Sbjct: 278 IADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKN 334
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +E G + + +G L D+ T++T++ + AL + + GV+P+
Sbjct: 335 GQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ LINA G A+ LFEEM +GC P+ N L+ + +A L +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 458 ---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSSF-- 505
S ++ + DG RI E D Q I+ N F N+
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF--NTLIDGLCK 508
Query: 506 DKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
DK+ +P TYN ++ C D + ++ M G + ++
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
P+ +TY + R R G +++ +M G+
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGG--PIKEAFDFMLEMVDKGF 668
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 192/454 (42%), Gaps = 48/454 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + L + +DM G + +I+ C+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 56/377 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 243 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 355
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 356 VGDAF--------------------------------------------TYNTLIHGYCQ 371
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ-CLAVY 644
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E + C +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 645 QDMWKAGYKANDTYLKE 661
+D + + D L++
Sbjct: 492 EDGFMPSERIYDETLRD 508
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 45/423 (10%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 142 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 198 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 257 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
+++ R L E CL ++ + + G K + +I C +Q + L
Sbjct: 435 IIQGLCRTDKLKEA-WCL--FRSLTRKGVKPDAIAYITMISGLCRKGLQREADK-----L 486
Query: 684 CRR 686
CRR
Sbjct: 487 CRR 489
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 139 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 192 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 248
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 249 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 308 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 360
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 37/387 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 112
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 113 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 171
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 225
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 273
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 274 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE-- 390
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ M G N LI+ C+
Sbjct: 391 -VFDQMDLQGISRNAITFNTLIDGLCK 416
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 165/402 (41%), Gaps = 34/402 (8%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ I + +T N +V N L N H + L+V M + G D+ +YNI++ C
Sbjct: 184 QEIADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E G + + +G L D+ T++T++ + AL + + GV+
Sbjct: 241 KNGQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 296
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ LINA G A+ LFEEM +GC P+ N L+ + +A L
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356
Query: 456 FR---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSSF 505
+ S ++ + DG RI E D Q I+ N F
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416
Query: 506 DKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
DK+ +P TYN ++ C D + ++ M G + ++
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
P+ +TY + R R G +++ +M G+
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGG--PIKEAFDFMLEMVDKGF 576
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 153/359 (42%), Gaps = 33/359 (9%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ AD YN LL L + +Y E + A+G+ K DV T++T++K A
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSE---MGARGI-KPDVVTFNTLMKALCRAH 103
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A+ + E+M S GV P+ T+++L+ G +E A+ + ML+ GC N
Sbjct: 104 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 163
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+L+ C+ R L Q + + ++ D+I+ + N
Sbjct: 164 VLING---YCKLGRV-----EDALGYIQQEIADGFE--PDQIT------YNTFVN--GLC 205
Query: 498 PNSHYSSFDK------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
N H K + P TYNI++ C + K ++N+M G P+
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI A +E AL + + + G+SPDV + I + A LFEEM
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
K+ P+ VTY TL+ SL ++ + L + +DM G + +I+ C+
Sbjct: 326 KNSGCTPDEVTYNTLI---DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 177/470 (37%), Gaps = 90/470 (19%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S+ V + F +LM V ++ L V M ++G A + N+L+ C
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 171 KLGR---VEDALGYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M+ GC P+ N L+ A + + A L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T+ P
Sbjct: 287 ARQVTVK-----------------------------------------------GVSPDV 299
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+NIL+ A C D + L EM+ G +P+ +++ LID G + AL +LK
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G + Y T I + R+++A +F++M I N +T+ TL+ +
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD-- 417
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQ 693
++ + M G + N+ ++ +C+ QG++
Sbjct: 418 -KKIDDAFELINQMISEGLQPNNITYNSILTHYCK---------QGDI------------ 455
Query: 694 SLLLEKVAVHLQKSAAENLAID-------LRGLTKVEARIIVLAVLRMMK 736
+K A L+ A +D + GL K + L VLR M+
Sbjct: 456 ----KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 411
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 505
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 506 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 545 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 583
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 434
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 435 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 493
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + M G P + N +LQ+ A LFR
Sbjct: 494 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 533
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 177/408 (43%), Gaps = 48/408 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFT 308
P++ I T+ID G+C G + + E +RSQ + +N L++ A +++
Sbjct: 381 PDVVIYNTLID--GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E++ M K GV ++ + N L+ C G A + E + KG D TY+
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKG----DAVTYTA 494
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ++ A+++ +ML +G +P+ I + +LI+ + AG + A + E+ + G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P++ C N L+ +F R F + + ME +
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKE-----------------------MEEAGLK 591
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKAL-- 535
T T N + + D +F+ K PT TY ++ A C + +A+
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651
Query: 536 MNEMRTVG-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+M+ + PN + + ILI++ + V+ A+ +++ M+ G++P+ Y K
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
K L++ F + M + P+ +T L S G + +++ +A
Sbjct: 712 DEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVA 759
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 176/415 (42%), Gaps = 37/415 (8%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYK 313
C +++ G++ + + E + ++ N+ F L+N H KF LEV +
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN---HMCKFRRVDDALEVLE 364
Query: 314 NMQ--------KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
M + V D+ YN L+ C G QE G ++ + ++ D T
Sbjct: 365 KMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR---QQEGLGLMERMRSQKGCAPDTIT 421
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ F A + ++ ++M GV PN +T ++L+ G V A++ F E
Sbjct: 422 YNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQ 481
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G + ++ L+ A F++A LF S D IS
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS----GCSPDAIVYYTLISGFSQA 537
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVG 543
+ + +FV K+ +P T YN L+ C ++RV ++ EM G
Sbjct: 538 GRMA---DASFVLAEL-----KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ I++ LI +G+++ A ++++ M + G+ P V Y I + +A
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 604 SLFEEMKHY-QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+F++MK ++ PN V Y L+ + + ++V+ +++ +DM G N T
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKN---NKVKSAVSLMEDMKIWGVTPNTT 701
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 30/369 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M KLG + + A+ N LL GN E+ ++ ++ ++ +V T+ +
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD----IQPNVVTFGIL 346
Query: 370 VKVFADAKWWQMALKVKEDM--------LSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ + AL+V E M +S V P+ + +++LI+ G ++ + L
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406
Query: 422 EEML-QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M Q GC P++ N L+ +A + ++ LF ++K VA + +
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDE--MNKEGVA--PNVVTVNTLVG 462
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
M + +++ NF + +R K TY L+ A C ++ + L NE
Sbjct: 463 GMCRTGR--VSSAVNFFVEA------QRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G SP+ I + LI +G + A +L +++ G+ PD V Y T I R+ +
Sbjct: 515 MLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ F + +EM+ ++P+ +TY TL+ S+ G L Q+ V + M KAG
Sbjct: 575 FHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQK---VMRKMIKAGVVPTVAT 631
Query: 659 LKELIEEWC 667
+I +C
Sbjct: 632 YGAVINAYC 640
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 25/384 (6%)
Query: 295 NSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
NSL+ A + F E+ + M ++ + ++ ++ IL+ C A E+ ++
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368
Query: 353 LEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINA 407
+ G + + DV Y+T++ Q L + E M S G P+TIT++ LI+
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG +E+ LF+EM + G PN N L+ + A F + +
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF----VEAQRRG 484
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ D T I+ + N NF + + P Y L+
Sbjct: 485 MKGDAVTYTALIN--------AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQ 536
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
A ++ E++ +G+ P+ + + LI + ++LK M E G+ PD +
Sbjct: 537 AGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTIT 596
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T I ++ LK A + +M + P + TY ++ A G+ +E + +++
Sbjct: 597 YNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME---IFK 653
Query: 646 DMWKAGYKANDTYLKE-LIEEWCE 668
DM A +T + LI C+
Sbjct: 654 DMKAASKVPPNTVIYNILINSLCK 677
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 37/387 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 204
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 205 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 317
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 365
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 366 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE-- 482
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
V+ M G N LI+ C+
Sbjct: 483 -VFDQMDLQGISRNAITFNTLIDGLCK 508
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 38/402 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I + +T N +V N L N H + L+V M + G D+ +YNI++ C
Sbjct: 278 IADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKN 334
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +E G + + +G L D+ T++T++ + AL + + GV+P+
Sbjct: 335 GQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ LINA G A+ LFEEM +GC P+ N L+ + +A L +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 458 ---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSSF-- 505
S ++ + DG RI E D Q I+ N F N+
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF--NTLIDGLCK 508
Query: 506 DKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
DK+ +P TYN ++ C D + ++ M G + ++
Sbjct: 509 DKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
P+ +TY + R R G +++ +M G+
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGG--PIKEAFDFMLEMVDKGF 668
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 192/454 (42%), Gaps = 48/454 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + L + +DM G + +I+ C+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 137/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A + M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C + +G + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI---DDAFGLINQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625
>gi|356544435|ref|XP_003540656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1071
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 172/416 (41%), Gaps = 72/416 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTL 309
PN++ +I C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 507 PNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDV 566
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + LLKAC AG AQE+Y V+ KG ++ Y+
Sbjct: 567 LAEMAAETQPIDPDHVTIGALLKACTKAGQVERAQEVYKMVQKYNIKGCPEV----YTIA 622
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V DM G+ P+ I S+LI+ +A ++ A + +E + G
Sbjct: 623 INSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEAHKGGI 682
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + +A L+
Sbjct: 683 QIGIMSYSSLMGACSNARNWQKALELYE-------------------------------- 710
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL + EM+ +GLSPN
Sbjct: 711 ---------------YLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLSPN 755
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ILI A ++E A IL + ++DG++P+++ I +C R R ++A + E
Sbjct: 756 SITFSILIVASEKKDDMEAAQMILSLAKKDGVAPNLIMCRCIIGMCQR--RYEKACFVGE 813
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ + LV +++ SL L VY++ +AG K L +++
Sbjct: 814 PVLSFDSGRPLVD--------NKWTSL-----ALMVYRETIEAGGKPTSEILPQIL 856
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 150/342 (43%), Gaps = 19/342 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L+ D Y+T++ A + +
Sbjct: 439 LSTFNMLMSVCASSQDS----EGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMF 494
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI CA AG V +A + M +P+ N L+ AC
Sbjct: 495 EVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAAC 554
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + ++TQ D + I + ++ T
Sbjct: 555 AQSGAVDRAFDVLAEMA-AETQ-----PIDPDHVTIGAL----LKACTKAGQVERAQEVY 604
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++++ K Y I + +C D+ + + N+M G+ P+ I + LID G +
Sbjct: 605 KMVQKYNIKGCPEVYTIAINSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHA 664
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A +L+ + G+ +++Y++ + C ++ ++A L+E +K ++ + T
Sbjct: 665 KKLDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTV 724
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LL A + Q+ L V +M G N LI
Sbjct: 725 NALLTALC---DGDQFQKALEVLFEMKGLGLSPNSITFSILI 763
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ + L PN + ++ +L+ C S + EGA Q+L+++++ + PD YTT I
Sbjct: 422 KAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLYTTLI 481
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
C +S ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 482 LTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAG---QVAKAFGAYGIMRSK 538
Query: 651 GYKANDTYLKELI 663
K + LI
Sbjct: 539 NVKPDRVVFNALI 551
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R P +T+N+LM C + ++V L+ + R L P+ +T LI C SG
Sbjct: 432 RLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDAR---LEPDCKLYTTLILTCAKSG 488
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V +
Sbjct: 489 KVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFN 548
Query: 623 TLLRARSRYGSLHEVQQCLA 642
L+ A ++ G++ LA
Sbjct: 549 ALIAACAQSGAVDRAFDVLA 568
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 191/449 (42%), Gaps = 22/449 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C + F K+ + A +D K P++ +I V G+ +S ++ +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V N++ FN + + + +++ G+ D+ SYN L+ C V
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E Y H ++ + FTY+TI+ F A Q A K+ D + G P+ T+
Sbjct: 304 EA-ECY---LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SSLIN N G + +AM +F E ++ G + + N L++ + + ++ L
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG------LSKQGLVLQALQL 413
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + G D T + + K + N + N + P T+N L
Sbjct: 414 MKDMMEHGCSPDIWTYNLV-VNGLCKMGCLSDANGILNDAIAK-----GCIPDIFTFNTL 467
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C KA +++ M + G++P+ I++ L++ + ++ + K M E G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P+++ Y I+ + +++ +A LF+EMK + P++VT TL+ G L + +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +K Y +I +CE
Sbjct: 588 LFVTIEKEYKFSYST--AIFNIMINAFCE 614
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 184/387 (47%), Gaps = 47/387 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHDLKF-TL 309
P+ + ++I+ G+C GD ++ A++ + + +I ++N+L+ ++ L L
Sbjct: 354 PDEFTYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ K+M + G D+ +YN+++ C G A I + AKG + D+FT++T+
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI---AKGCIP-DIFTFNTL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+++ + MLS G+TP+ IT+++L+N A ++ + F+ ML+ GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVAL-----GEDYDGNTDRISN 481
PN NIL+++ + + A LF ++ L+ V L G +G D+
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + +K + F +T +NI++ A C + + L ++M
Sbjct: 588 L-------------------FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV----CVR 595
+P++ ++ ++ID+ +GN++ A L G+ P ++TT KV CV
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP---SFTTCGKVLNCLCV- 684
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ RL +A + M I P V I
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEEVNSI 711
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 186/477 (38%), Gaps = 95/477 (19%)
Query: 282 LRSQNVTLN-IYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGN 339
+R QN LN + +FN + + K TLE YK M +KLG+ + +L +
Sbjct: 14 IRYQNDPLNALKMFNQVKTEDG--FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71
Query: 340 TVLAQEIY-GEVKHLEAKGVLK--LDVF-------------TYSTIVKVFADAKWWQMAL 383
+ + + +Y G ++ KG ++ ++VF +Y+ I+ + + ++ A
Sbjct: 72 SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCNILLQA 442
KV M G+ P+ T + + + G A+ L M GCE N+ C ++
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
E CQ + A+ LF KQ I
Sbjct: 192 YKENCQIE-AYHLFDEML--------------------------KQGIC----------- 213
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T+N L+ C + + L +++ G+ PN ++ I I
Sbjct: 214 ----------PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A ++L+ + +G++PDV++Y T I + +L +A +M + ++PN T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
Y T++ + G + + L +D G+ ++ LI C D + N+
Sbjct: 324 YNTIINGFCKAGMMQNADKIL---RDAMFKGFIPDEFTYSSLINGLC----NDGDMNRAM 376
Query: 681 VTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKE 737
S++L V +GL+K + +VL L++MK+
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLV--------------KGLSK---QGLVLQALQLMKD 416
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 26/381 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++Y+ + S + N Y N L+N H L F V ++ KLG A++
Sbjct: 70 YSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTT 129
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L++ C+ G A +++ + + +G + DV TY T++ A++ M
Sbjct: 130 LIRGLCVEGKIGEALQLFDK---MTGEG-FQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
P + +S++I++ + +A+ LF +ML G PN+ + L+ +
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD---KQSITNTPNFVPNSHYSSFD 506
A RLF + K D+++ D K+ + ++V + S
Sbjct: 246 KEAIRLFYAMIHRKIM----------PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS-- 293
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP TYN LM C ++ + + + M G P+ IS+T LI+ +
Sbjct: 294 ---DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIM 350
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ + + M + G+ PD V Y T I RL+ A +LF EM Y P+LVTY L
Sbjct: 351 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 410
Query: 625 LRARSRYGSLHEVQQCLAVYQ 645
+ L E L V +
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIE 431
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 178/433 (41%), Gaps = 64/433 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNS 296
+A+R + ++ P + + TIID +C D + A+ + D+ ++ ++ N + ++S
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIID--SLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 234
Query: 297 LMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L++ + H K + ++ M +M D ++N L+ A C G V A V +
Sbjct: 235 LIHGLCILGH-WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHY----VVDV 289
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ LK DV TY++++ + V + M+ G P+ I++++LIN +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++AM LFEEM Q G P++ N L+ + A LF V G+
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM------VVYGQ--- 400
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
P TY IL C ++ +
Sbjct: 401 --------------------------------------IPDLVTYRILFDYLCKNHRLAE 422
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+ + L P+ ++I++D +G +E A + + G+ PDV YT I
Sbjct: 423 AMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 482
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L +A LF EM PN TY + R R +E + + ++Q+M G
Sbjct: 483 GLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN---NETLRAIQLFQEMLSRG 539
Query: 652 YKANDTYLKELIE 664
+ + + L+E
Sbjct: 540 FSIDVSTTTLLVE 552
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ R + D +C ++ + A + + + N+ +I++++ +M+ A +L+
Sbjct: 402 PDLVTYRILFDY--LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ +Y I++ C G A +++GE ++ G + TY+ I
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE---MDENGC-SPNACTYNLI 515
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ F A+++ ++MLS G + + T + L+ ++ GL + + E +Q
Sbjct: 516 TRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 23/357 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR---AMGLLP-DVITYNSLLNGYC 356
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ I+ G +E+A L EEM + GC PN
Sbjct: 357 KAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVC 416
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNT 493
IL++ + C A R F LSK L D + NT + + D
Sbjct: 417 TYTILMKGSLNVCSLAMA-REFFDEMLSK---GLQPDCFAYNTRICAELILGDIARALEL 472
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
+ SS T TYNIL+ C + K L +M + GL P+ I++
Sbjct: 473 REVLMLEGISS---------DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 523
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LI A G + A +I M DG+ P V +T I R L A+ F +M
Sbjct: 524 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 583
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++PN +TY L+ A R G Q + +M + G AN LI+ C+
Sbjct: 584 EGVEPNEITYNVLIHALCRMG---RTQLASHHFHEMLERGLVANKYTYTLLIDGNCK 637
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 164/395 (41%), Gaps = 33/395 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G++ D+ +YN LL
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA-----EMRAMGLLPDVITYNSLLNG 354
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AGN A ++G+++ + L V TY+ + + + A +KE+M G
Sbjct: 355 YCKAGNLKEALLLFGDLR----RAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++ L+ N + A F+EML G +P+ N + A + RA
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAL 470
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L +V + E +T + + H + T N +P
Sbjct: 471 EL--------REVLMLEGISSDTVTYNILIH----GLCKTGNLKDAKELQMKMVSNGLQP 518
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N M + GL P+ +++T++I A GN+ A
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E+G+ P+ + Y I R R + A F EM + N TY L+ +
Sbjct: 579 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 638
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G+ + + Y +M + G + K L++ +
Sbjct: 639 GNWEDAMR---FYFEMHQNGIHPDYLTHKALVKGF 670
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 48/279 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++ DA W V E+ML G+ P+ +T+++L+++ G ++ L
Sbjct: 168 DVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 227
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+EM +GC PN N+++ + A L LSK +
Sbjct: 228 KEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS------------ 275
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
F++ P T +L + C Y ++ EM
Sbjct: 276 -----------------------------FTYNPLIT--GLLARGCVKKVYDLQL---EM 301
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P +++ +I SG VE A MR G+ PDV+ Y + + ++ L
Sbjct: 302 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 361
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
K+A LF +++ + P ++TY + R G L E +
Sbjct: 362 KEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEAR 400
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + D+ LE+ + + G+ +D +YNIL+
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+E+ ++ L+ D TY+ ++ + + A K+ +M+S
Sbjct: 494 GLCKTGNLKDAKELQMKM----VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
G+ P+ +T++ +I+A G + A F +ML+ G EPN N+L+ A
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 599
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E + S VT NI + N D K E+ M G+ D +Y L+ A C G
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAK---ELQMKMVSNGLQPDCITYTCLIHAHCERGL 535
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I+ ++ + G+L V T++ I+ + A ML GV PN I
Sbjct: 536 LREARKIF---NNMISDGLLPSAV-TFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 591
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++ LI+A G + A H F EML+ G N +L+ + ++ A R +
Sbjct: 592 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFY 648
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL 318
I + G+C G+ ++ + + S + + + L++ + L+ +++ NM
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ ++ +++ A C GN A YG + + +GV + + TY+ ++
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSA---YGWFRKMLEEGV-EPNEITYNVLIHALCRMGR 605
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
Q+A +ML G+ N T++ LI+ G E AM + EM Q G P+
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 659
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 202/487 (41%), Gaps = 55/487 (11%)
Query: 197 IVQLCVNKPDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
++ CV + ++ A+R +C V ++ V+ + K+ LVSAL +D ++
Sbjct: 320 VIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
SPN +I+ C G+ K+ +Y ++++N+ +++ NSL+ +E
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRG-----FLKVES 434
Query: 312 YKNMQKL---GVMADMA---SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ KL V D+A +YN LL C G A ++ + + KG+ V +
Sbjct: 435 REEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLW---QKMLDKGLAPTKV-S 490
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ MA V DML G+ PN IT+S L++ G E A ++F+ M+
Sbjct: 491 YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV 550
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ NI + + + A + + + + K V + Y+ D E
Sbjct: 551 DENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF-VEKGFVPVCLTYNSIMDGFIK-EGS 608
Query: 486 DKQSITN---------TPNFVPNSHYSSFDKRFSFKPTT-------------------TT 517
++T +PN + Y++ F T
Sbjct: 609 VSSALTAYREMCESGVSPNVIT---YTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAA 665
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ C D L +E+ GLSPN + + LI N+E AL + K M
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+G+S D+ YTT I ++ RL A L+ EM I P+++ Y L+ G L
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785
Query: 636 EVQQCLA 642
Q+ LA
Sbjct: 786 NAQKILA 792
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 28/378 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ + +++ D+ + N+ ++ LM+ D ++ V+ M +
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YNI + C G T AQ++ +K KG + + TY++I+ F
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDM---LKKFVEKGFVPV-CLTYNSIMDGFIKEGSVS 610
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL +M +GV+PN IT+++LIN + A+ + EM G E + L+
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + A SW S E DG S + + N N
Sbjct: 671 DGFCKKQDIETA-----SWLFS-------ELLDGGLSPNSVIYNSLISGYRNLNNM---E 715
Query: 501 HYSSFDKRFSFKPTT---TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
+ KR + + TY L+ + V AL +EM G+ P+ I +T+LI
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G G +E A +IL M D ++P+V Y I ++ L++AF L EM +
Sbjct: 776 NGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835
Query: 616 PNLVTYITLLRARSRYGS 633
PN TY L+ + + G+
Sbjct: 836 PNDTTYDILINGKIKGGN 853
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 28/359 (7%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EVY+ M GV D + +I+++A N A++ + E K ++GV KLD YS +
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAK---SRGV-KLDAAAYSIV 285
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ F ++A + +DM G P+ T++S+I AC G + +A+ L +EM+ G
Sbjct: 286 IQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGV 345
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRISN 481
+ N L++ + + A F + ++ A+ ++ +GN + +
Sbjct: 346 QMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYD 405
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT--------------TYNILMKACCT 527
+ + K F+ NS F K S + + TYN L+ C
Sbjct: 406 LYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCK 465
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +A L +M GL+P +S+ +I GN++ A + M + G+ P+V+
Sbjct: 466 EGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVIT 525
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y+ + ++ + AF +F+ M I P+ TY + + G E Q L +
Sbjct: 526 YSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF 584
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 168/397 (42%), Gaps = 29/397 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
KSR + D + ++ + + N D++ + K+M+ G + ++ ++ A
Sbjct: 271 KSRGVKLDAAAYSIVIQAFCKN-------LDVELACGLLKDMRDKGWVPSEGTFTSVIGA 323
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C GN V A + E + + GV +++V +T+VK + AL+ + M G
Sbjct: 324 CVKQGNMVEALRLKDE---MVSCGV-QMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+PN +T++ LI C G + +A L+ +M P N L++ ++ + A
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS 439
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+LF + + N+ +S + + K S T DK + P
Sbjct: 440 KLFD----EAVACDIANIFTYNS-LLSWLCKEGKMSEATT------LWQKMLDKGLA--P 486
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T +YN ++ C + ++ ++M GL PN I+++IL+D +G+ E A +
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++ + P Y I + R +A + ++ P +TY +++ +
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
GS V L Y++M ++G N LI +C+
Sbjct: 607 GS---VSSALTAYREMCESGVSPNVITYTTLINGFCK 640
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 32/327 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y +++ C G+T LA + +++ +G L+ V Y+TI+ K
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKH 66
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + ++M + G+ PN +T+SSLI+ N G A L +M++ P+ +
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + S+ N F
Sbjct: 127 LIDAFVKEGKLVEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCM 168
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHI 549
+ + F F P TYN L+K C Y RV+ M EM GL N +
Sbjct: 169 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTV 227
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ILI +G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +++P + TY ++ + G + +
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVED 314
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 164/386 (42%), Gaps = 59/386 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 49 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 106
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 162
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 163 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 256
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 257 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGS 633
EMK PN Y TL+RAR R G
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGD 381
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 158/383 (41%), Gaps = 57/383 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K + + AL + + PN+ ++I G + + + D+ + + +++
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 293 VFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
F++L++ + K ++Y M K + + +Y+ L+ C+ A++++
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF--- 179
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +K DV TY+T++K F K + ++V +M G+ NT+T++ LI
Sbjct: 180 EFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG + A +F+EM+ G PN N LL + + ++A +F SK +
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME----- 293
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
PT TYNI+++ C
Sbjct: 294 ------------------------------------------PTIYTYNIMIEGMCK-AG 310
Query: 531 RVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+V+ L + G+ P+ +++ +I G+ E A + K M+EDG P+ Y
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370
Query: 588 TAIKVCVRSKRLKQAFSLFEEMK 610
T I+ +R + + L +EM+
Sbjct: 371 TLIRARLRDGDREASAELIKEMR 393
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 149/355 (41%), Gaps = 56/355 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 177
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 233
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 325
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 326 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ LI A G+ E + +++K MR G + D + + RL ++F
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDKSF 420
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 17/282 (6%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M++ G P+ +T+ ++N G + A +L +M Q EP N ++ +
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A LF+ + N S++ + N + S S
Sbjct: 67 MDDALNLFKEMETKGIRP--------NVVTYSSL----ISCLCNYGRWSDASRLLSDMIE 114
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P T++ L+ A + V+A L +EM + P+ ++++ LI+ ++
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q+ + M PDVV Y T IK + KR+++ +F EM + N VTY L++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G Q+ ++++M G N L++ C+
Sbjct: 235 GLFQAGDCDMAQE---IFKEMVSDGVPPNIMTYNTLLDGLCK 273
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL++ M G P+ +++ ++++ G+ + A +L M + + P V+ Y T I
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ K + A +LF+EM+ I+PN+VTY +L+ YG + + L+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 110
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 202/454 (44%), Gaps = 38/454 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++R + +++ S ++ +
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS--GLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A+++
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 359 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
+V +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF----- 511
+S V +G + +M +KD N + +++ S D +F
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534
Query: 512 ------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ TYN+L+K C + + L+ +R GL P+ +S+ +I AC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL++L+ M + G+ P + Y T + + R+ L+++M H ++P+ Y
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ A R + +V ++ ++M + G +DT
Sbjct: 655 MVDAYVRCENDSKVA---SLKKEMSEKGIAFDDT 685
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 177/435 (40%), Gaps = 68/435 (15%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N +++AC AG+ +A + + E G D F+Y+ ++ +
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSE--GAPPPDAFSYNVVIAGLWRSGK 209
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
ALKV ++M+ GV PN IT++++I+ G +E L ++ML G +PN N+
Sbjct: 210 GSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNV 269
Query: 439 LLQACVEACQ--------------------------FDRAFRLFRSWTLS-------KTQ 465
LL A + FD R S T+ K
Sbjct: 270 LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 329
Query: 466 VALGEDY----------DGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
V LG DG + + + H T N + N + D R +F
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389
Query: 512 -----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+P TYN L+ C KA L+ EM G+ P+ ++ LIDA
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G +G +E +L M++ G+ DV+++ + +K ++ ++ +A ++ ++M + + PN
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
Y +++ A G + +Q + + M +G A+ L++ C D+ +
Sbjct: 510 QVYNSIIDAYIESG---DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE-- 564
Query: 679 GEVTLCRRTNSQRPQ 693
E+ R RP
Sbjct: 565 -ELIYTLRNQGLRPD 578
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 26/243 (10%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ N+L+++ + V+A + G P+ +W ++ AC +G+++ AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 571 LKIM-REDGMSP-DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M R +G P D +Y I RS + A +F+EM + PN +TY T++
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
+ G L + + M G K N L+ C D+ +
Sbjct: 240 VKGGDL---EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETR------------ 284
Query: 689 SQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKV-EARIIVLAVLRMMKENYSLGTDEFH 747
+L++++A H +I GLT+ E+R ++ +K+ LG
Sbjct: 285 ------VLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCS 338
Query: 748 IML 750
I+L
Sbjct: 339 ILL 341
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + V+ F K + A+ D +PN + +IID GD ++ + E
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E+ E+ + L+ TY T+V A A + + ML V P++
Sbjct: 595 TDKALELLQEMNKYGIRPTLR----TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ +++A + L +EM + G
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKG 679
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 184/428 (42%), Gaps = 51/428 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLM-------NVNAHD 304
PN+ T+I G+C ++ S A LR Q + T N + +L+ NVN
Sbjct: 159 PNVVTYTTLIK--GLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI-A 215
Query: 305 LKFTLEVYKNMQKLGV--MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
LK E+ + + GV + +Y+I++ C G A+E++ E+K A+G++ D
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMK---AQGMIP-D 271
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V +YST++ F A W + + ++M+ GV P+ +T+S LI+ G V +A L E
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDG 474
M+Q G PN N L+ + A LF S +S T + G
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSF-------------------DKRFSFKPTT 515
N+ + + + +PN + Y + K + +
Sbjct: 392 KVKEAMNL-YNEMLQVGKSPNV---TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y I + C + + L NE+++ N +++ LID +G +E A ++ +
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ ++G+ PDVV Y I + ++ A LFE+M+ P+++ Y TLL
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567
Query: 634 LHEVQQCL 641
L EV + L
Sbjct: 568 LEEVIKLL 575
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 179/386 (46%), Gaps = 37/386 (9%)
Query: 245 DASKKHLS-SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-- 299
DAS+ ++ P + IID G+C G +++ ++E++++Q + ++ +++L++
Sbjct: 225 DASQYGVNCKPGVITYSIIID--GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + ++ M GV DM ++++L+ C G A+++ ++ + +G++
Sbjct: 283 CCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL---LEVMIQRGIV 339
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
++ TY++++ F A ++ M S G+ P+ I++++LIN V++AM+
Sbjct: 340 P-NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN 398
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG-- 474
L+ EMLQ G PN LL+ + + A +LF +++ +S G DG
Sbjct: 399 LYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLC 458
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
N ME ++ K ++FK Y+ L+ C
Sbjct: 459 KNDCLFEAMELFNEL------------------KSYNFKLNIENYSCLIDGLCKAGKLET 500
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L ++ GL P+ +++ I+I G V+ A + + M E+G +PD++AY T +
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLC 560
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPN 617
+L++ L +M + PN
Sbjct: 561 GFCEGNKLEEVIKLLHKMVQKDVSPN 586
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 169/407 (41%), Gaps = 64/407 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++Y ++R ++ +++ + L N N + + L + + G + ++ +Y
Sbjct: 107 YSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTT 166
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C+ A ++ ++ L + TY T++K +ALK+ ++M
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTP----NAVTYGTLIKGLCQTGNVNIALKLHKEM 222
Query: 390 LSA----GVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
L+ GV P IT+S +I+ G ++A LFEEM G P+ + L+
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A ++D++ LF D D+
Sbjct: 283 CCAGKWDQSKHLF----------------DEMVDQ------------------------- 301
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+P T+++L+ C + K L+ M G+ PN I++ LID
Sbjct: 302 ------GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A ++ M G+ PD ++YTT I ++ ++K+A +L+ EM PN+ TY
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TLL+ + G + + ++ V M G AN ++ C+
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGV---MKTYGVSANSQIYGIFLDGLCK 459
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
H+ R P +++N L+ A Y ++ +L NEMR GLSP+ + +IL +
Sbjct: 77 HFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCL 136
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V AL + + G P+VV YTT IK R+ +A LF M+ PN
Sbjct: 137 CNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNA 196
Query: 619 VTYITLLRARSRYGSLH 635
VTY TL++ + G+++
Sbjct: 197 VTYGTLIKGLCQTGNVN 213
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I + + + K + A+ Y+ + SPN+ T++ G ++ ++
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436
Query: 281 DLRSQNVTLNIYVFNSLMN-VNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+++ V+ N ++ ++ + +D F +E++ ++ ++ +Y+ L+ C AG
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E++ + L +G L+ DV TY+ ++ F A + E M G TP+
Sbjct: 497 KLETAWELF---EKLSQEG-LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
I +++L+ +E+ + L +M+Q PN+ C I++
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLN 290
+K + A + + K + S N I +D G+C + ++ ++ +L+S N LN
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD--GLCKNDCLFEAMELFNELKSYNFKLN 481
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I ++ L++ A L+ E+++ + + G+ D+ +YNI++ C G A ++
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF- 540
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ +E G D+ Y+T++ F + + +K+ M+ V+PN + + +++
Sbjct: 541 --EKMEENGCTP-DIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 500 SHYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHIS 550
+HYS ++ P T +IL C + RV + M + G PN ++
Sbjct: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLC-NVNRVSEALAAMAGILRRGYIPNVVT 163
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM- 609
+T LI + A ++ M++ G +P+ V Y T IK ++ + A L +EM
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223
Query: 610 ---KHYQI--QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
Y + +P ++TY ++ + G E ++ ++++M G + LI
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKE---LFEEMKAQGMIPDVISYSTLIH 280
Query: 665 EWC 667
+C
Sbjct: 281 GFC 283
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 164/396 (41%), Gaps = 40/396 (10%)
Query: 289 LNIYVFNSLM-NVNAHDLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+Y FN+L+ + D+ + + VY + GV + ++N ++ C G A +
Sbjct: 160 FTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLV 219
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + L D FTY++++ + A +V + M+ G PN++T+S+LIN
Sbjct: 220 FNKIFQFD----LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLIN 275
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
N G + +AM + EEM + G EP + + + + + D A L RS
Sbjct: 276 GLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSP 335
Query: 460 -TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ T + G G + M HK + VPN T TY
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKE-----GLVPN---------------TVTY 375
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ CT+ + + + M G N ++ +I G ++E A+ + M +
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLK 435
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG SP VV Y T I ++ L A MK +P+ TY L+ + G L
Sbjct: 436 DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVI 671
+ + +M K G N +I+ +C EG I
Sbjct: 496 AT---SFFYEMLKCGISPNQWTYTAMIDGYCKEGKI 528
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 189/473 (39%), Gaps = 36/473 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + GK + SA Y P++ T+I++ G ++ ++ +
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + + + SL+ + + K EV+ M K G + +Y+ L+ C G
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A ++ ++ + KG+ + V+TY+ + D A+ + M G +P+ T+
Sbjct: 285 EAMDM---LEEMTEKGI-EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+++I+ AG +E A+ ++ +ML+ G PN+ N L+ +F A ++F W
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF-DWME 399
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVP---------NSHYSS 504
+A + Y+ + M+ +K + +P V Y +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459
Query: 505 FDKRFSF-------KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
RF + +P TY L+ C + EM G+SPN ++T +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G ++ AL + + M E+G S + Y I + R +A +M +Q
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PN +TY +L+ + + ++ +M K N LI C+
Sbjct: 580 PNTITYTSLINGLCKNTA---TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 124/323 (38%), Gaps = 22/323 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G+ + +Y ++ C G +A ++ + +E G + TY+ I+
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF---ERMEENGC-SASIETYNAIIS 555
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A K M G+ PNTIT++SLIN A +F EM + C P
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ L+ + + D A RL T+ D + +S + + + +
Sbjct: 616 NAHTYTSLIYGLCQEGKVDAAERL--------TENGCEPTIDTYSTLVSGLCREGRSN-- 665
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
V N K P+ Y L+ A C AL N M G P+
Sbjct: 666 EASQLVENM------KEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF 719
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ +LI A G E AL I + + + + D++ +T + ++ M
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779
Query: 610 KHYQIQPNLVTYITLLRARSRYG 632
+ P+L TYI L R S+ G
Sbjct: 780 ESRNCTPSLHTYIILARELSKVG 802
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ +++++T++ A V + S+GV P+ +T++++IN G V++
Sbjct: 156 GLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQE 215
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F ++ Q P++ L+ + D+AF +F
Sbjct: 216 AVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF-------------------- 255
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
DR+ KD P + TY+ L+ C + +A
Sbjct: 256 DRMV----KD-----------------------GCNPNSVTYSTLINGLCNEGRIGEAMD 288
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ EM G+ P ++T+ I + G V+ A+ +++ M + G SP V YT I
Sbjct: 289 MLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLF 348
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR---ARSRYG 632
R+ +++ A ++ +M + PN VTY L+ R+G
Sbjct: 349 RAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 156/378 (41%), Gaps = 58/378 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + K++Q +GV D+ + N+L+ C + LA G++
Sbjct: 74 FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+FT+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 134 KLG----FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKN 189
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V+ A+ LF +M G P+ L+ + ++ A L R K
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK-------- 241
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A +
Sbjct: 242 ---------------------------------------IKPDVITFNALIDAFVKEGKL 262
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
K L NEM + ++PN ++T LI+ G ++ A Q+ +M G PDVVAYT+
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + K+++ A +F EM + N +TY TL++ G + Q+ V+ M
Sbjct: 323 INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQE---VFGHMVS 379
Query: 650 AGYKANDTYLKELIEEWC 667
G N L+ C
Sbjct: 380 RGVPPNIRTYNVLLHCLC 397
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 170/395 (43%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + +AL ++ + + P++ + ++++ G+C G + + +
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADLLL 234
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + K E+Y M ++ + ++ +Y L+ C+
Sbjct: 235 RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME 294
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K + A+K+ +M G+T N
Sbjct: 295 GRLDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + ++A +F
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF- 409
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
E K+ I P P T
Sbjct: 410 -------------------------EDMQKREIDGVP------------------PNIRT 426
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +M+ + I++TI+I +G V+ AL + +
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R + +A LF +MK
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 147/335 (43%), Gaps = 21/335 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ M+ G+ D+ Y L+ C +G A + + K +K DV T++
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM----MKRKIKPDVITFNA 251
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F A ++ +M+ + PN T++SLIN G +++A +F M G
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + + A ++F + +S+ + GNT I+
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIF--YEMSQKGLT------GNT--ITYTTLIQGF 361
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----NEMRTVG 543
+ PN V + R P TYN+L+ C + KALM + G
Sbjct: 362 GLVGKPN-VAQEVFGHMVSR-GVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDG 419
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ PN ++ +L+ +G +E AL + M++ M ++ YT I+ ++ ++K A
Sbjct: 420 VPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDAL 479
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+LF + ++PN+VTY T++ R G + E
Sbjct: 480 NLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAH 514
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 30/379 (7%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L + KLG D+ ++ L+ CL
Sbjct: 95 KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCL- 153
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + M + G+ P+
Sbjct: 154 GNRI--EEAMSMVNQMVEMGI-KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD 210
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M++ +P+ N L+ A V+ + A L+
Sbjct: 211 VVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYN 270
Query: 458 SWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
Q+++ + T I+ ME + ++ + + + F P
Sbjct: 271 EM----IQMSIAPNIFTYTSLINGLCMEGRLDEA---------RQMFYLMETKGCF-PDV 316
Query: 516 TTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C C + EM GL+ N I++T LI G G A ++
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ---PNLVTYITLLRARSR 630
M G+ P++ Y + + ++ +A +FE+M+ +I PN+ TY LL
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436
Query: 631 YGSLHEVQQCLAVYQDMWK 649
G L ++ L V+ DM K
Sbjct: 437 NGKL---EKALMVFGDMQK 452
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P T+ L+ C +++N+M +G+ P+ + +T +ID+ +G+V+
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL + M G+ PDVV YT+ + S R + A L M +I+P+++T+ L+
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
A + G L + ++ +Y +M + N LI C EG + + Q
Sbjct: 254 DAFVKEGKLLDAKE---LYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQ 302
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T N+LM C A + ++ +G P+ ++T LI+ +E A+ ++ M
Sbjct: 108 TCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM 167
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G+ PDVV YTT I ++ + A SLF +M++Y I+P++V Y +L+ G
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRW 227
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
+ L + M K K + LI+ + EG + D + E+
Sbjct: 228 RDADLLL---RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G+ G ++ ++
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG-NTITYTTLIQGFGLVGKPNVAQEVFG 375
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ K L ++++MQK GV ++ +YN+LL C
Sbjct: 376 HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLC 435
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++G+++ + + + K A + AL + + S GV
Sbjct: 436 YNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK----AGKVKDALNLFCSLPSKGVK 491
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL+ +A LF +M + G
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 161/362 (44%), Gaps = 48/362 (13%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M G PN ++ ++L+ A A +F M G EP++ I+L+
Sbjct: 157 AEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLK 216
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHK 485
VE +F A LF S L+K + L D GN ++ + M +
Sbjct: 217 TFVEGSKFKEAEELFDS-LLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAAR 275
Query: 486 DKQSITNTPNFVPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
T T N + + ++Y K R +P +Y +L+ A +AL
Sbjct: 276 GVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAV 335
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P H ++ IL+DA SG VE A + K M+ D SPD+ +YTT + V
Sbjct: 336 FEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVN 395
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ ++ A + F +K +PN+VTY TL++ Y ++ +++ + Y++M G + N
Sbjct: 396 ASDMEGAENFFRRLKQDGFRPNVVTYGTLIKG---YAKINNLEKMIKRYEEMKVNGIRVN 452
Query: 656 DTYLKELIEEWCEGVIQDKNQNQG-------EVTLCRRTNSQRPQSLLLEKVAVHLQKSA 708
T L +++ + KN++ G E+ C Q+ +++LL L K+A
Sbjct: 453 QTILTTIMDAY------GKNKDFGSAVIWFNEIESCGLRPDQKAKNILL-----SLAKTA 501
Query: 709 AE 710
E
Sbjct: 502 EE 503
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 170/393 (43%), Gaps = 26/393 (6%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+++ F + +GK D A + + K +PN+ +++ G Y + AI+
Sbjct: 137 SEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIF 196
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT-----LEVYKNMQKLGVMADMASYNILLKAC 334
++S + + ++ KF + N +K + D +++++
Sbjct: 197 RRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMF 256
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AGN A++++ E + A+GV + V TY++++ + ++ K+ + M AG+
Sbjct: 257 KKAGNYEKARKVFAE---MAARGVPQTTV-TYNSLMSFETN---YKEVSKIYDQMQRAGL 309
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++++ LI+A A E+A+ +FEEML AG P + NILL A + ++A
Sbjct: 310 QPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKI 369
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F+S + D T +S + N + ++ K+ F+P
Sbjct: 370 VFKSMKRDRC----SPDICSYTTMLS--------AYVNASDMEGAENFFRRLKQDGFRPN 417
Query: 515 TTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+K A + ++ EM+ G+ N T ++DA G + + A+
Sbjct: 418 VVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFN 477
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ G+ PD A + + ++ L +A L
Sbjct: 478 EIESCGLRPDQKAKNILLSLAKTAEELDEANQL 510
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ R + ++N M G +PN +S T L++A G A I + M+ G P + Y
Sbjct: 153 DFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQ 212
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+K V + K+A LF+ + + + ++P+ + ++ + G+ + ++ A
Sbjct: 213 IMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFA 270
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LI A G G+ A ++L +M + G +P+VV++T ++ R +R A ++F
Sbjct: 137 SEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIF 196
Query: 607 EEMKHYQIQPNLVTYITLLR 626
M+ +P+ +TY +L+
Sbjct: 197 RRMQSGGPEPSALTYQIMLK 216
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 181/472 (38%), Gaps = 98/472 (20%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL- 599
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 600 ----------------------------------KQAFSLFEEMKHYQIQPNLVTYITLL 625
+A+ L M+ PN+VTY ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+G +V +CL + + M G N + LI C G++ D +Q
Sbjct: 784 DG---FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 175/446 (39%), Gaps = 59/446 (13%)
Query: 263 IDVCGICG-------DYMK-SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
I + GICG D ++ + Y ++ +V LN ++L KF +
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G + D ++Y+ ++ C A A ++ E+K + V+ DVFTY+ ++
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK---SNHVVP-DVFTYTILIDS 524
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F Q A K ++M+ G PN +T+++LI+A A + A LFE ML GC PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 433 SQCCNILLQACVEACQFDRA-------------------FRLFRSWTLSKTQVALGEDYD 473
L+ ++ Q ++A F++ G D
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------SFKP 513
G E +D + + PN Y + F + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ D AL ++ M +PN I +T +ID G + A +++
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+M E G P+VV YT I ++ ++ + L +M PN VTY L+
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824
Query: 632 GSLHEVQQCL-AVYQDMWK---AGYK 653
G L + Q L + Q W AGY+
Sbjct: 825 GLLDDAHQLLDEMKQTYWPKHMAGYR 850
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 83/391 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTDYYRVKAL---------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
C + ++ +L EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGN-EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM 472
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L
Sbjct: 473 SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLL- 531
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
QQ + +M + G N LI +
Sbjct: 532 --QQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 173/430 (40%), Gaps = 38/430 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R + SA ++ PN+ +ID G K+ IY
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 282 LRSQ----NVTL------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+R +V + NI+ + +L++ AH +K ++ M G +
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQ ++ + + +G +V+TYS+++ K +AL
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML PN I ++ +I+ G ++A L M + GC PN ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+A + D+ L R A G + T R+ + H + ++H
Sbjct: 787 GKAGKVDKCLELMRQMG------AKGCAPNFVTYRVL-INH------CCAAGLLDDAHQL 833
Query: 504 SFDKRFSFKPT-TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + ++ P Y +++ ++ L++E+ P ++ ILID+ +G
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Query: 563 NVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL++ K M + D Y++ I+ + ++ +AF L+ +M P L
Sbjct: 894 RLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSI 953
Query: 621 YITLLRARSR 630
+ L++ R
Sbjct: 954 FFYLVKGLIR 963
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 146/630 (23%), Positives = 252/630 (40%), Gaps = 82/630 (13%)
Query: 79 SKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSIREGRIDCVVGVL 136
S LA+D L + E ++ G F M L EM G + G + +G
Sbjct: 78 SALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREG--HEVGLGLVQSFIG-- 133
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
A L+LFD F L+ N+ E++ L+ VL E +K L+ +
Sbjct: 134 ------SYARLQLFD-DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS-KIKLLESAYT 185
Query: 197 IVQLCVNKPDV---NLAIRYACIVPRA------------------DILFCNFVREFGKKR 235
+ +PDV N I C +A + F + F ++
Sbjct: 186 EMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEG 245
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-----GDYMK--SRAIYEDLRSQNVT 288
+ +ALR + SP +I+ G C GD + + I + VT
Sbjct: 246 SIEAALRLKARMSEMGCSPTSVTVNVLIN--GYCKLGRVGDALGYIQQEIADGFEPDRVT 303
Query: 289 LNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +V N L N H + L+V M + G D+ +Y+ ++ CL N L +E G
Sbjct: 304 FSTFV-NGLCQ-NGH-VDHALKVLGLMLQEGCEPDVYTYSTVIN--CLCNNGEL-EEAKG 357
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
V + G L D T++T++ + AL + ++ G++PN T++ LINA
Sbjct: 358 IVNQMVDSGCLP-DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQ 465
G A+ LFEEM +GC P+ NIL+ + + +A L + +S ++
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 466 VALGEDYDG--NTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI E D+ +T T+N L+
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVT------------------GIGRNAITFNTLI 518
Query: 523 KACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
C + R+ L+++M + GL PN++++ ++ GN+ A IL+ M +G
Sbjct: 519 DGLC-NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y T I +++R + A L M+ ++P Y ++++ R + +
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRG---NNGRD 634
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
L+++++M + G + K + C G
Sbjct: 635 ALSLFREMTEVGGPPDAFTYKIVFRGLCRG 664
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 165/377 (43%), Gaps = 56/377 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LE++ M+K G++AD +YN L+ C +G A +
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN +T++SLIN
Sbjct: 779 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A H+F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT---HQGL 891
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 892 VGDAF--------------------------------------------TYNTLIHGYCQ 907
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+ P+ +++ IL+D +G +E AL +++ ++++ M D++
Sbjct: 908 AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ-CLAVY 644
Y I+ R+ ++K+A+ LF + ++ + + YIT++ R G E + C +
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Query: 645 QDMWKAGYKANDTYLKE 661
+D + + D L++
Sbjct: 1028 EDGFMPSERIYDETLRD 1044
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 159/352 (45%), Gaps = 22/352 (6%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M K G ++ YN L+ C G+ +A E+ E +E KG L D+ TY+T++
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNE---MEKKGRLAADLVTYNTLLTGL 216
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ W+ A ++ DM + P+ T+++LI+A G +++A L+++MLQ+ PN+
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N L+ C R + +++ L ++ NT + N K ++
Sbjct: 277 VTYNSLING---LCMHGRLYHAKKTFDLMASKGCFPNVVTYNT--LINGFCKSRRVEDGM 331
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRV-KALMNEMRTVGLSPNHISW 551
F Y R T TYN L+ C RV K + + M + G++P+ I+
Sbjct: 332 KLF--QRMY-----REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
IL+ +G + A+ MR +VAY I ++ ++++A+ LF +
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY--KANDTYLKE 661
++P+ TY ++ + G E + +++ M + G +A D +L E
Sbjct: 445 EGVKPDARTYTIMILGLCKNGPRREADE---LFRRMKEDGIICQAEDGHLGE 493
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 174/404 (43%), Gaps = 40/404 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V ++ +N D+ + ++ M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 621 VLTAIAKMNKFDI--VIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMK 678
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANA 411
L + + T +++ F +Q A+ + + M G+ PN + ++++IN C N
Sbjct: 679 LG----FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------ 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 735 DL-NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793
Query: 466 VALGEDY--DGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSF-------DKRFSFK--- 512
AL + + +GN N+ +K+ + PN + NS + F D + F
Sbjct: 794 TALIDTFVKEGNLLEAKNL-YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852
Query: 513 -----PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C RV+ L EM GL + ++ LI +G +
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++ M + G+ PD+V Y + + ++++A + E+++ Q+ +++TY +
Sbjct: 912 NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ R +V++ +++ + + G K + +I C
Sbjct: 972 IQGMCRN---DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 37/352 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R R + +L K+ +LG P + GS LL CQ + V L++ + E
Sbjct: 662 RCSRFSLALALLGKMMKLGFQPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMAEL 714
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL------------FCNFVREFG 232
L + I LC N+ D+N A+ + + I+ CN G
Sbjct: 715 GLEPNVVIYNTVINGLCKNR-DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS----G 769
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ D LR D K+ + PN+ +ID G+ ++++ +Y+++ ++V NI
Sbjct: 770 RWTDAARLLR--DMVKRKID-PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYG 348
+NSL +N ++ L K+M L G D+ +YN L+ C + +++
Sbjct: 827 TYNSL--INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ H G D FTY+T++ + A +A KV M+ GV P+ +T++ L++
Sbjct: 885 EMTHQGLVG----DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
N G +E+A+ + E++ + + + NI++Q + A+ LFRS T
Sbjct: 941 CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 55/311 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D+++++ ++ F +AL + M+ G P+ +T+ SL++ + A L
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M+++G EPN N L+ + + A L ++
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL-----------------------LNE 195
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
ME K + TYN L+ C ++ + ++ +M
Sbjct: 196 MEKKGR-----------------------LAADLVTYNTLLTGLCYSGEWRQAARILRDM 232
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
++P+ ++T LIDA GN++ A ++ K M + + P+ V Y + I RL
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA--RSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
A F+ M PN+VTY TL+ +SR V+ + ++Q M++ G +
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSR-----RVEDGMKLFQRMYREGLVGDTF 347
Query: 658 YLKELIEEWCE 668
LI +C+
Sbjct: 348 TYNTLIHGYCQ 358
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/498 (18%), Positives = 192/498 (38%), Gaps = 62/498 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + F K+ +L A Y + PN ++I+ G+C G ++ ++
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN--GLCMHGRLYHAKKTFDL 301
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ N+ +N+L+N + ++ +++++ M + G++ D +YN L+ C G
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A++I+ + + GV D+ T+ ++ A+ DM S +
Sbjct: 362 LRVAKDIF---SWMVSCGVTP-DIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIV 417
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ A VE+A LF + G +P+++ I++ + A LFR
Sbjct: 418 AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM 477
Query: 460 T----------------LSKTQVALGEDYDGNTDRISNME-------HKDKQSITNTPNF 496
+ QV+LG R S ME + D ++
Sbjct: 478 KEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGL 537
Query: 497 VPNSHYSS---FDKRFSF------KPTTTTYN-----------------ILMKACCTDYY 530
+P + SS F +R P + +++ + + C +
Sbjct: 538 IPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFD 597
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L EM P+ + +T ++ A + + + M G+S D+ ++T I
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
R R A +L +M QP++VT +LL + + Q+ +++ M +
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNG---FCQGNRFQEAVSLVDSMAEL 714
Query: 651 GYKANDTYLKELIEEWCE 668
G + N +I C+
Sbjct: 715 GLEPNVVIYNTVINGLCK 732
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ R LR D +K+ ++ P+++ +ID G+ +++ +Y+ + ++ N
Sbjct: 220 GEWRQAARILR--DMTKRRIN-PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 292 YVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+NSL+N + H L + + M G ++ +YN L+ C + +++
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF-- 334
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ + +G++ D FTY+T++ + ++A + M+S GVTP+ IT L++
Sbjct: 335 -QRMYREGLVG-DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G + AM F +M NI++ +A + + A+ LF
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF 439
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 170/436 (38%), Gaps = 61/436 (13%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G+ + + D+RS L I +N +++ A ++ E++ + GV
Sbjct: 390 GLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKP 449
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKGVLKLDVFTYSTIVK 371
D +Y I++ C G A E++ +K HL G + + TI+
Sbjct: 450 DARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTN--NQVSLGTII- 506
Query: 372 VFADAKWWQMALKVKEDMLSAG----VTPNTITWSSLIN--ACANAGLVEQAMHLFEEML 425
+ K + ++ +G +T WSSL+ A++ V+ + +L
Sbjct: 507 ---------ICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLL 557
Query: 426 QAGCEPNSQCCNIL---------------LQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ G P S+ + L++ + +FD AF LF S+ ++
Sbjct: 558 ERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSI-V 616
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D+ I+ M N + V + + S + T I C+ +
Sbjct: 617 DFTRVLTAIAKM---------NKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFS 667
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
AL+ +M +G P+ ++ L++ + A+ ++ M E G+ P+VV Y T I
Sbjct: 668 LALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVI 727
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++ L A +F M+ I + VTY TL+ G + + L +DM K
Sbjct: 728 NGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL---RDMVKR 784
Query: 651 GYKANDTYLKELIEEW 666
N + LI+ +
Sbjct: 785 KIDPNVIFFTALIDTF 800
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ + L+ A Y V +M G+S + S+TILI + AL I
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 571 LKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L M + G P +V + + + C+R+ R+ AFSL M +PN+V Y TL+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRN-RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ G +V L + +M K G A D
Sbjct: 182 KNG---DVNIALELLNEMEKKGRLAAD 205
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ + +T L+ A E + + M G+S D+ ++T I R RL A S+
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+M P++VT+ +LL +H+ ++ M K+GY+ N LI+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA---FSLVASMVKSGYEPNVVVYNTLIDC 179
Query: 666 WCE 668
C+
Sbjct: 180 LCK 182
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 42/429 (9%)
Query: 270 GDYMKSRAIYEDL-----RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
GDY +++D+ R N+T N + H + + M K D+
Sbjct: 226 GDYGSVWKLFKDMIFKGPRPSNLTFNAMICGF---CRQHRVVVGESLLHLMPKFMCSPDV 282
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++NIL+ ACC+ G T +A + HL + ++ V T++TI+ A K
Sbjct: 283 VTFNILINACCIGGRTWVAIDWL----HLMVRSGVEPSVATFTTILHALCREGNVVEARK 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + + G+ PN +++L++ A V QA L+EEM G P+ NIL+
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYD---------GNTDRISNMEHKDKQSITNTPN 495
+ + + + RL + +S + YD G D + + +
Sbjct: 399 KYGRIEDSDRLLKDLIVSGLFLD-SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSV 457
Query: 496 FVPNSHYSSF------DKRF---------SFKPTTTTYNILMKACCTDYY--RVKALMNE 538
NS ++ DK F F P+++T N L+ C + + L+
Sbjct: 458 VAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G N +++T+L+D N+EGA + K M+E G+ PD VA+T I ++
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+++A+ +F EM PN Y +L+R G V + L + ++M + G ++
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG---RVTEALKLEKEMRQKGLLSDTFT 634
Query: 659 LKELIEEWC 667
+I+ +C
Sbjct: 635 FNIIIDGFC 643
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 216/495 (43%), Gaps = 57/495 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI----- 278
F + ++ ++V A + +D + +PN I T++D Y K+R +
Sbjct: 320 FTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMD------GYFKAREVAQASL 373
Query: 279 -YEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++R+ V+ + FN L+ + ++ + + K++ G+ D + Y++++ + C
Sbjct: 374 LYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLC 433
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A ++ ++ L KG L L V +++++ ++ A A + M+ G T
Sbjct: 434 WAGRLDEAMKL---LQELLEKG-LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFT 489
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-----VEACQFD 450
P++ T +SL+ G +++A L ML+ G N +LL +E QF
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQF- 548
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH-YSSFDKR 508
++ + + VA DG + N+E + + + FVPN+ Y+S +
Sbjct: 549 -LWKEMKERGIYPDAVAFTALIDG-LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606
Query: 509 F-------------------SFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSP 546
T T+NI++ C + ++ + +M+ +GL P
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFL-DMQRIGLLP 665
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ ILI + ++ GA +I+ M G+ PD+ Y T + R +++ QA +
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEV-QQCLAVYQDMWKAGYKANDTYLKELIEE 665
+++ I P+ VTY T+L G ++ + + + + K G+ N L+
Sbjct: 726 DQLISAGIVPDTVTYNTMLS-----GICSDILDRAMILTAKLLKMGFIPNVITTNMLLSH 780
Query: 666 WCEGVIQDKNQNQGE 680
+C+ + +K G+
Sbjct: 781 FCKQGMPEKALIWGQ 795
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 178/430 (41%), Gaps = 80/430 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ TI+ G+ +++R +++ ++ + N ++N+LM+ A ++ +
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLL 374
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-------KHLEAKGVLKLDVF 364
Y+ M+ GV D ++NIL V YG + K L G+ LD
Sbjct: 375 YEEMRTTGVSPDCVTFNIL----------VWGHYKYGRIEDSDRLLKDLIVSGLF-LDSS 423
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y +V A A+K+ +++L G+T + + ++SLI A + AGL ++A + M
Sbjct: 424 LYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM 483
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ G P+S CN LL L R L + ++ L
Sbjct: 484 VRCGFTPSSSTCNSLLMG------------LCRKGWLQEARILL---------------- 515
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV------KALMNE 538
Y +K F Y +L+ Y+++ + L E
Sbjct: 516 -----------------YRMLEKGFPIN--KVAYTVLLDG----YFKMNNLEGAQFLWKE 552
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ P+ +++T LID +GNVE A ++ M G P+ AY + I+ R
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A L +EM+ + + T+ ++ R G +++ + + DM + G +
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRG---QMKFAIETFLDMQRIGLLPDIFT 669
Query: 659 LKELIEEWCE 668
LI +C+
Sbjct: 670 FNILIGGYCK 679
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A AY + +P+ C +++ G+C G ++R + + + +N + L
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLL--MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ ++L+ ++K M++ G+ D ++ L+ AGN A E++ E + A
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE---MSA 590
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G + + F Y+++++ D ALK++++M G+ +T T++ +I+ G ++
Sbjct: 591 IGFVP-NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMK 649
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A+ F +M + G P+ NIL+ + +AF + + + + G D D
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGG------YCKAFDMVGAGEIVNKMYSCGLDPDIT 703
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKA 534
T + M + N + + S+ P T TYN ++ C+D R
Sbjct: 704 TYN-TYMHGYCRMRKMNQAVIILDQLISA-----GIVPDTVTYNTMLSGICSDILDRAMI 757
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++ +G PN I+ +L+ G E AL + +RE D ++Y
Sbjct: 758 LTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISY-------- 809
Query: 595 RSKRLKQAFSLFEE 608
+ L QA+ L ++
Sbjct: 810 --RILDQAYCLMQD 821
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 127/308 (41%), Gaps = 52/308 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +T+++ F + AL+V M GV P + + L+ G LF
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M+ G P++ N ++ C F R R V +GE
Sbjct: 236 KDMIFKGPRPSNLTFNAMI------CGFCRQHR-----------VVVGE----------- 267
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ + +P +F P T+NIL+ ACC A+ ++ M
Sbjct: 268 ----------SLLHLMP---------KFMCSPDVVTFNILINACCIGGRTWVAIDWLHLM 308
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ ++T ++ A GNV A ++ +++ G++P+ Y T + +++ +
Sbjct: 309 VRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREV 368
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
QA L+EEM+ + P+ VT+ L+ +YG + + + L +D+ +G + +
Sbjct: 369 AQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLL---KDLIVSGLFLDSSLY 425
Query: 660 KELIEEWC 667
++ C
Sbjct: 426 DVMVSSLC 433
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 183/416 (43%), Gaps = 24/416 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTL 309
P+ ++ G + + A++ + V I +N +++V A K +
Sbjct: 151 GPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 210
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ +M++ GV D +YN L+ C A +++ E+K A G + D T++++
Sbjct: 211 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSL 266
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V+ A+ A++V ++M G P+ +T++SLI++ GL+EQA+ L +EM G
Sbjct: 267 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM 326
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ A + D A + + + L Y+ ++ + K +
Sbjct: 327 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC-TYNALI-KMHGVRGKFPEM 384
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPN 547
+ F + F P T+N L+ + V + EM+ G P
Sbjct: 385 MAVFDEF----------RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 434
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ LI + G + A+QI K M E G+ PDV Y + R R +QA LF
Sbjct: 435 RDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 494
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM+ +P+ +Y +LL A Y + + + A+ D++ + ++ +K L+
Sbjct: 495 EMEERDCKPDEYSYSSLLHA---YANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 547
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 197/450 (43%), Gaps = 47/450 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + Y+++ N+ +N+L+ ++ KF + V
Sbjct: 328 PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV 387
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 388 FDEFRSAGFVPDIVTWNTLL---AVFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLIS 443
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + +A+++ + M+ AG+ P+ T++++++A A G EQA LF EM + C+P
Sbjct: 444 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Query: 432 NSQCCNILLQACVEACQFDRAFRLF----------RSWTLSKTQVALGEDYDGNTDRISN 481
+ + LL A A + D+ L +W L KT V + +++N
Sbjct: 504 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-LVKTLVLV-------NSKVNN 555
Query: 482 MEHKDK------QSITNTPNFVPNSHYS---------------SFDKRFSFKPTTTTYNI 520
+ +K Q + V N+ S S K + + TYN
Sbjct: 556 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 615
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+ G
Sbjct: 616 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 675
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ PDVV Y +K V + ++A L M +PN TY +++ R G L + +
Sbjct: 676 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + K L E+I ++ +
Sbjct: 736 IFVSNLPQLHPGYSKQEQQNLFEVIAKYTQ 765
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 65/319 (20%)
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
V A+E++GE GVL +T ++V A A L +L A P+
Sbjct: 108 AVAARELHGE-------GVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAG 155
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++L++A + AG A+ +F M+ +G +P N++L
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------ 197
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK V E + +++M K P TYN
Sbjct: 198 VYSKMAVPWKE----VVELVASM------------------------KEHGVAPDRYTYN 229
Query: 520 ILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ +CC Y + +EM+ G P+ +++ L+D G + + A+++++ M
Sbjct: 230 TLI-SCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P VV Y + I V+ L+QA +L +EM+ ++P++VTY TL+ R G +
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAG---K 345
Query: 637 VQQCLAVYQDMWKAGYKAN 655
+ + Y +M + G K N
Sbjct: 346 IDAAIVEYDEMVRNGCKPN 364
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L A +A+ ++ S ++ + ++ + G K I ++ + L+
Sbjct: 552 KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAA 611
Query: 293 VFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSLM++ + D + + ++ GV D SYN ++ A G A ++ E+
Sbjct: 612 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 671
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CA 409
K G LK DV TY+ VK + ++ A+++ M++ G PN T++S++ C
Sbjct: 672 K---CSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
Query: 410 NAGLVE 415
N L +
Sbjct: 728 NGKLTD 733
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 164/391 (41%), Gaps = 66/391 (16%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G + A+ +D+ + ++ + L+
Sbjct: 126 DAARRLIASMPVPPDAYTYTPIIR--GLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLL 183
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F + V M+ G ++ +YN+++ C G A+EI + L +
Sbjct: 184 EAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI---LNRLSSY 240
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D+ +Y+T++K A+ W + +M+ PN +T+ L+ G+VE+
Sbjct: 241 G-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + ++M Q GC PN+ CNI++ A + + D A+
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY----------------------- 336
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
D ++NM + P T +Y +++ C + K
Sbjct: 337 DFLNNM------------------------GMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ EM PN +++ I G +E A++++++M E G S +V Y +
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R+ A LF + +PN +TY TLL
Sbjct: 433 VQGRVDSALELFNNLP---CEPNTITYTTLL 460
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 45/378 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G + NI++ A C G + Y + ++ G D +Y+T
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRV---DDAYDFLNNMGMYGC-NPDTISYTT 356
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ A W+ A ++ +M+ PN +T+++ I GL+EQA+ L E M + G
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFR---------SWTLSKTQVALGEDYDGNTDR 478
C N L+ CV+ + D A LF ++T T + E D +
Sbjct: 417 CSVGIVTYNALVHGFCVQG-RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ M KD T+N+L+ C + +A L+
Sbjct: 476 LAGMIQKD------------------------CPLNAVTFNVLVSFFCQKGFVEEAMELV 511
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G +PN I++ L+D N E AL++L + G+S D + Y++ + V R
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 571
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R ++A + ++ ++P + Y +L A + E Q + + M G N+
Sbjct: 572 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR---CETDQAIDFFAYMVSNGCMPNE 628
Query: 657 TYLKELIEEWC-EGVIQD 673
+ LIE EG++++
Sbjct: 629 STYIILIEGLAHEGLLKE 646
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 232
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL + G PD+V+YTT +K ++R LF EM + PN VT+ L+R
Sbjct: 233 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R G V++ + V Q M + G N T +I C +G + D
Sbjct: 293 RGGM---VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 156/399 (39%), Gaps = 60/399 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC------------- 266
++ F VR F + + A++ +H +PN +C +I+ +C
Sbjct: 281 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 340
Query: 267 -------------------GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
G+C G + ++ + ++ +N N FN+ + +
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 400
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ +++ + M + G + +YN L+ C+ G A E++ + + +
Sbjct: 401 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-------CEPNT 453
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ A+ A ++ M+ N +T++ L++ G VE+AM L +
Sbjct: 454 ITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 513
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNM 482
M++ GC PN N LL + C + A L L V+L Y D +S
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG--LVSKGVSLDTITYSSVVDVLSR- 570
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
E + +++I + +P YN ++ A C +A+ M
Sbjct: 571 EDRTEEAI----------QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 620
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ G PN ++ ILI+ G ++ A +L + G+
Sbjct: 621 SNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y R+ A + ++ + P+ ++T +I G V AL +L M +
Sbjct: 112 YNTLVAGYCR-YGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S +A ++ +EM+ PN+VTY ++ R G + +
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 638 QQCL 641
++ L
Sbjct: 231 KEIL 234
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 34/341 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ K M G ++ +YN L+ C A T A E+ ++ L + G + DV TY+
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL---LESLVSSGFVP-DVVTYTI 441
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IV ALK+ E ML G TP+ IT+++L+ G V++A H+F+EM+
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDY--DGNTDRISNME 483
C ++ L+ ++ + A ++ R AL + Y +G D I N+
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNV- 560
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+D PN TYNI+M C +A + M +
Sbjct: 561 FEDMACRGCVPNI-------------------KTYNIVMDGLCKHGKVDEAFPFLESMHS 601
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ +S+ I+ID + + A Q+L M + G+ PD V Y T + + +R
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARS---RYGSLHEVQQ 639
A + + M + P+ VTY TL+ S R G +E+
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 702
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 64/368 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK LE+++N+ D +YN ++ C + A E E+ + + DVF
Sbjct: 211 LKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERK----VAPDVF 262
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ A A ++ +M+ GVTP+T+T++S+++ AG E+A L M
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322
Query: 425 LQAGCEPNSQCC--NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ C P+ CC N L+ L K Q N DR ++
Sbjct: 323 AERNCRPS--CCTYNTLISG------------------LCKQQ---------NVDRAKDL 353
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
FV + F P TY+IL C +A L+ EM
Sbjct: 354 ----------VDEFVSSG----------FVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +PN +++ LID + E A ++L+ + G PDVV YT + + RL
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + E M P+++TY L+ R G + E ++++M A+
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH---IFKEMVSKDCTADALAYV 510
Query: 661 ELIEEWCE 668
L+ +C+
Sbjct: 511 SLVNGYCK 518
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 153/377 (40%), Gaps = 62/377 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V SL +N D FT+ + G +++ Y IL +A C G A EI+
Sbjct: 166 VIKSLCQMNQIDKAFTM--LDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF----- 218
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ + D Y+ I+ AL+ ++M V P+ T++ LI+ A
Sbjct: 219 ---RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS 275
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++A + EM+ G P++ N ++ +A +F+RA L
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL----------------- 318
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYY 530
++ M ++ +P+ TYN L+ C +
Sbjct: 319 ------LAVMAERN------------------------CRPSCCTYNTLISGLCKQQNVD 348
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R K L++E + G P+ ++++IL D G ++ A +++K M G +P++V Y T I
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + ++A+ L E + P++VTY ++ + G L + L + + M K
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL---DKALKMVEGMLKR 465
Query: 651 GYKANDTYLKELIEEWC 667
G + L+E C
Sbjct: 466 GCTPSVITYTALMEGLC 482
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 136/583 (23%), Positives = 236/583 (40%), Gaps = 91/583 (15%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L K + E+ ++ES+V S G V +++ ++ G+ K EGR+D +
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLV-SSGFV---PDVVTYTIIVDGLCK---EGRLDKAL 456
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
+++ + + G P V + LME L +DE
Sbjct: 457 KMVEGMLKRGCTP-----------------------SVITYTALMEGL----CRTGRVDE 489
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
I + V+K A+ Y +V +C R + + +V +R +
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNG----YCKSSRT-KEAQKVVDGIRG---------T 535
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P + + ++D G C G + ++ED+ + NI +N +M+ K
Sbjct: 536 PYIDVYNALMD--GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 593
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++M G + D+ SYNI++ A A+++ ++ + + D TY+T+
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM----IQAGIPPDAVTYNTL 649
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + + A+ + ++M+ AGV P+ +T+++LI+ + + A L EML+ GC
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709
Query: 430 EPNSQCC---NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-------DRI 479
S C I+ + C E C +A L T G + NT DR+
Sbjct: 710 VV-SACTTYNTIIDRLCKEGC-LKQALLLMDHMT--------GHGVEANTVTYNIFIDRL 759
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
D+ S S S D TT L KA D R L EM
Sbjct: 760 CKEGRLDEAS----------SLLSEMDTLRDEVSYTTVIIGLCKAEQLD--RASKLAREM 807
Query: 540 RTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
V GL ++ +LIDA + ++ AL +L +M + G SP V+ Y I + +
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +A+ LF+EM I + V+Y L+ G E Q L
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 151/376 (40%), Gaps = 81/376 (21%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D LE K M + V D+ +YNIL+ C A T A E+ E
Sbjct: 240 NDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE------------- 286
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
M+ GVTP+T+T++S+++ AG E+A L
Sbjct: 287 --------------------------MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320
Query: 423 EMLQAGCEPNSQCC--NILLQACVEACQFDRAFRL--------FRSWTLSKTQVALGEDY 472
M + C P+ CC N L+ + DRA L F ++ + +A G
Sbjct: 321 VMAERNCRPS--CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
G D + K+ TPN V TYN L+ C
Sbjct: 379 RGRIDEAFELV-KEMSGKGCTPNLV-------------------TYNTLIDGLCKASKTE 418
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA L+ + + G P+ +++TI++D G ++ AL++++ M + G +P V+ YT +
Sbjct: 419 KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL-----AVYQ 645
+ R+ R+ +A +F+EM + + Y++L+ + E Q+ + Y
Sbjct: 479 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI 538
Query: 646 DMWKAGYKANDTYLKE 661
D++ A D Y KE
Sbjct: 539 DVYNA---LMDGYCKE 551
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 510 SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
FK +T T N ++ + R+ A+ M G +P+ ++ ++I + ++ A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+L + G P+V YT + ++ RLK A +F + P+ + Y ++
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHG 235
Query: 628 RSR 630
R
Sbjct: 236 HCR 238
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 183/416 (43%), Gaps = 24/416 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTL 309
P+ ++ G + + A++ + V I +N +++V A K +
Sbjct: 169 GPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 228
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ +M++ GV D +YN L+ C A +++ E+K A G + D T++++
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSL 284
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V+ A+ A++V ++M G P+ +T++SLI++ GL+EQA+ L +EM G
Sbjct: 285 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM 344
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ A + D A + + + L Y+ ++ + K +
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC-TYNALI-KMHGVRGKFPEM 402
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPN 547
+ F + F P T+N L+ + V + EM+ G P
Sbjct: 403 MAVFDEF----------RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 452
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ LI + G + A+QI K M E G+ PDV Y + R R +QA LF
Sbjct: 453 RDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM+ +P+ +Y +LL A Y + + + A+ D++ + ++ +K L+
Sbjct: 513 EMEERDCKPDEYSYSSLLHA---YANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 199/452 (44%), Gaps = 22/452 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + +A+ YD ++ PN+ +I + G+ G + + A++++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
RS +I +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +IY K + G+ DV TY+ ++ A W+ A K+ +M P+
Sbjct: 468 LFDLAMQIY---KRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++SSL++A ANA +++ L +++ EP++ L+ + A + F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF-- 581
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L + + +L D N + + + + S K + + TY
Sbjct: 582 LELRQKRCSL----DINVLNAMVSIYGKNRMVRKVEKIL------SLMKESAINLSAATY 631
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y +K V + ++A L M +PN TY +++ R G L +
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++ + K L E+I ++ +
Sbjct: 752 AKIFVSNLPQLHPGYSKQEQQNLFEVIAKYTQ 783
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 204/466 (43%), Gaps = 40/466 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + Y+++ N+ +N+L+ ++ KF + V
Sbjct: 346 PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV 405
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 406 FDEFRSAGFVPDIVTWNTLL---AVFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLIS 461
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + +A+++ + M+ AG+ P+ T++++++A A G EQA LF EM + C+P
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 432 NSQCCNILLQACVEACQFDRAFRLF----------RSWTLSKTQVALGEDYDGNTDRISN 481
+ + LL A A + D+ L +W L KT V + +++N
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-LVKTLVLV-------NSKVNN 573
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
+ +K + KR S + + +V+ +++ M+
Sbjct: 574 LAEAEKAFLELR------------QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKE 621
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
++ + ++ L+ G+ E IL ++ G+ PD +Y T I R ++K+
Sbjct: 622 SAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKE 681
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LF EMK ++P++VTY +++ Y S ++ + + + M G K N+
Sbjct: 682 ASRLFSEMKCSGLKPDVVTYNIFVKS---YVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 662 LIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
++E +C G + D + S++ Q L E +A + Q+
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVIAKYTQR 784
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 58/308 (18%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +GVL +T ++V A A L +L A P+ +++L++A +
Sbjct: 130 RELHGEGVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAGAYTALVSAFSR 184
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG A+ +F M+ +G +P N++L SK V E
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------VYSKMAVPWKE 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
+ +++M K P TYN L+ +CC
Sbjct: 227 ----VVELVASM------------------------KEHGVAPDRYTYNTLI-SCCRRRA 257
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y + +EM+ G P+ +++ L+D G + + A+++++ M G P VV Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V+ L+QA +L +EM+ ++P++VTY TL+ R G ++ + Y +M
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAG---KIDAAIVEYDEM 374
Query: 648 WKAGYKAN 655
+ G K N
Sbjct: 375 VRNGCKPN 382
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 181/449 (40%), Gaps = 68/449 (15%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
AIR+A D + NF D LR PN+ +ID CG
Sbjct: 124 AIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKG 183
Query: 270 G-DYMKSRAIYEDLR------SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
G D+ ++ I++++ + + +I+ +N+L++ + ++ M + +
Sbjct: 184 GVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHI 243
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M ++ +Y+ ++ AG A ++ E+K + LD +Y+T++ ++A ++
Sbjct: 244 MPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF----ASIGLDRVSYNTLLSIYAKLGRFE 299
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V ++M S+G+ + +T+++L+ G E+ +FEEM PN + L+
Sbjct: 300 EALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLI 359
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + A +FR +
Sbjct: 360 DVYSKGGLYQEAMEVFREF----------------------------------------- 378
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
K+ K Y+ L+ A C + A+ ++EM G+ PN +++ +IDA
Sbjct: 379 ------KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAF 432
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQA----FSLFEEMKHY 612
G SG VE A + +ED + A K C K R +Q ++F +M
Sbjct: 433 GRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHEL 492
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+PN+VT+ +L A SR S + L
Sbjct: 493 DIKPNVVTFSAILNACSRCNSFEDASMLL 521
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 160/382 (41%), Gaps = 62/382 (16%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG-NTVLAQEIYGEVK---HLEAKGVL 359
D F L N G+ ++ +YN ++ AC G + A EI+ E+ + +G+
Sbjct: 150 DYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGI- 208
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ D+FTY+T++ +A ++ +M + PN +T+S++I+ A AG +++A++
Sbjct: 209 EQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 268
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM A + N LL + +F+ A + + S
Sbjct: 269 LFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS----------------- 311
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
K TYN L+ Y VK +
Sbjct: 312 ------------------------------GIKKDAVTYNALLGGYGKQGKYEEVKRVFE 341
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ + PN ++++ LID G + A+++ + ++ G+ DVV Y+ I ++
Sbjct: 342 EMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNG 401
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ A S +EM I+PN+VTY +++ A R G + + + + G K ++
Sbjct: 402 LVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATES--------EVGDKEDNQ 453
Query: 658 YLKELIEEWCEGVIQDKNQNQG 679
+K + E K +N+G
Sbjct: 454 IIKIFGQLAAEKTCHAKKENRG 475
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 37/308 (12%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+KH+ PN+ T+ID G ++ ++ +++ ++ L+ +N+L+++ A +F
Sbjct: 240 RKHIM-PNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRF 298
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V K M+ G+ D +YN LL G + ++ E+K A+ + ++ T
Sbjct: 299 EEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMK---AERIFP-NLLT 354
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST++ V++ +Q A++V + AG+ + + +S+LI+A GLVE A+ +EM
Sbjct: 355 YSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT 414
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------ 479
+ G PN N ++ A + + A T+ +G+ D +I
Sbjct: 415 KEGIRPNVVTYNSIIDAFGRSGIVEDA-----------TESEVGDKEDNQIIKIFGQLAA 463
Query: 480 -----SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRV 532
+ E++ +Q I H KP T++ ++ AC C +
Sbjct: 464 EKTCHAKKENRGRQEILCILAVFHKMH------ELDIKPNVVTFSAILNACSRCNSFEDA 517
Query: 533 KALMNEMR 540
L+ E+R
Sbjct: 518 SMLLEELR 525
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 203/490 (41%), Gaps = 80/490 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+D ++ +I G ++ + E ++ + +N++++
Sbjct: 228 ARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVID 287
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + G+ D ++N LL AC AG+ A+ ++ E+ HL +
Sbjct: 288 ACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSG 347
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D++TY+T V +AL+V DM + PN +T+S+L++ + ++
Sbjct: 348 ----RDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDE 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L E+M + + C N LL V+ ++D T+ + LG + D
Sbjct: 404 ALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIA------TVCEEMEKLGIEKD--- 454
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
T TYN L+ V
Sbjct: 455 --------------------------------------TVTYNSLINGYGKQGRLDMVAF 476
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ DVV +++ I
Sbjct: 477 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 536
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA----------RSRYGSLHEV----QQC 640
++ ++ A SL +EM I+PN+VTY T++ A S G + V Q
Sbjct: 537 KNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGVYGGQV 596
Query: 641 LAVYQDMWKAGYKANDTYLK---------ELIEEWC-EGVIQDKNQNQGEVTLCRRTNSQ 690
+ V + + G A D ++ EL ++ +GV + + C R NS
Sbjct: 597 VRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSF 656
Query: 691 RPQSLLLEKV 700
+LLLE++
Sbjct: 657 EDAALLLEQL 666
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 171/405 (42%), Gaps = 50/405 (12%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
+ PN+ T++D Y ++ + E ++S + L+ +N+L+ + K+
Sbjct: 381 AKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIA 440
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V + M+KLG+ D +YN L+ G + + V+ + A+GV V TYST+
Sbjct: 441 TVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFL---VQDMRAQGVAP-SVLTYSTL 496
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +++ A A V D +G+ + + +SS I+ A GLVE A+ L +EM++ G
Sbjct: 497 IDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGI 556
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N ++ A F ++ ++F + + Y G R++N + +S
Sbjct: 557 KPNVVTYNTIIDA------FGKS-KIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRS 609
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
T ++ M+ + + + L +M G+ PN +
Sbjct: 610 AT---------------------------DVRMRR-SQELFFILELFQKMVQQGVRPNVV 641
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +++AC + E A +L+ +R S VAY + + QA SLF ++
Sbjct: 642 TFSAILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLMG---HREAWSQARSLFNQL 698
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
+ Y L +G QQ + V+++ W
Sbjct: 699 GRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVWENTW 743
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 197/478 (41%), Gaps = 72/478 (15%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P +D L F+ + L A A+ + P++ C ++ G +R
Sbjct: 147 TPSSDFLIHTFITSPAQG-SLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAR 205
Query: 277 AIYEDLR-SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+++++R S+NV LN Y + +++ A + E+ + + G+ + +YN+L+ A
Sbjct: 206 EVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDA 265
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +G A + G ++ +G + V T+ ++ A + + V ++M G
Sbjct: 266 LCKSGRVEEAFRLKGRME----QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLG 321
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V+PN + ++ LI G QA+ LF+EM+ +P + N++ +A + + +RA
Sbjct: 322 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAE 381
Query: 454 RLFR------------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--- 492
R+ +W L +T+ R+ ++ SITN
Sbjct: 382 RILEDMLSIGMTVHCGLFNTVVAWLLQRTR------------RLESV-----VSITNEMV 424
Query: 493 TPNFVPNSH----------------------YSSFDKRFSFKPTTTTYNILMKACCTDYY 530
T PN + + +K T+ N L+ C Y
Sbjct: 425 TRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATS--NALIHGLCEGKY 482
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A ++ M G+ + I++ I+I C +E A+++ M G PD+ + T
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ ++++ F L ++MK +QP++V+Y T++ + + + ++ L D
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD 600
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 205/460 (44%), Gaps = 46/460 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASY 327
G+ ++ I ED+ S +T++ +FN+++ A L+ T LE ++ V M
Sbjct: 375 GEMERAERILEDMLSIGMTVHCGLFNTVV---AWLLQRTRRLESVVSITNEMVTRGMRPN 431
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGV--------LKLDVFTYSTIVKVFADAKWW 379
+ L+ AC +E+ KH EA G+ L +++ T + ++ + K+
Sbjct: 432 DPLMTAC--------MRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYM 483
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV + ML+ G+ ++IT++ +I C +E+A+ L +M + G +P+ N L
Sbjct: 484 KEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 543
Query: 440 LQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L A + + F L ++ L V+ G DG H + I +
Sbjct: 544 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG---------HCKAKDIRKAKEY 594
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ D+ KP YN L+ + A+ + M++ G+ P ++++ L
Sbjct: 595 LTEL----MDR--GLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ +G VE A I RE+ + V+ YT I+ + ++ +A + FEEM+ I
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
PN +TY TL+ A S+ G+ E + ++ +M +G ++ LI E DK
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASK---LFDEMVGSGVIPDNITYGTLIARCSEVNSLDK 765
Query: 675 N-QNQGEVTLCRRTNSQRPQSLLLEKV-AVHLQKSAAENL 712
+ + E++ T R ++L + A QK AA ++
Sbjct: 766 DIGHTAELSSGALTKDDRMYNILSNGINAPWCQKEAASSV 805
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDG 474
+A F + G P+ + CN L+A V A Q D A +F S+ VAL E Y
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESR-NVALNEYSYTA 226
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK-----RFSFKPTTTTYNILMKACCT-- 527
+ D + F+ R +PT TYN+LM A C
Sbjct: 227 MIKALCKAGKVD----------------AGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 270
Query: 528 ---DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +R+K M + G++P+ +++ ILI+ +L+ M + G+SP+ V
Sbjct: 271 RVEEAFRLKGRMEQG---GMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEV 327
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y I R QA LF+EM +++P VTY + +A + G + ++ L
Sbjct: 328 IYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL--- 384
Query: 645 QDMWKAG 651
+DM G
Sbjct: 385 EDMLSIG 391
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M E R V L N S+T +I A +G V+ ++L + G+ P VV Y + +
Sbjct: 211 MRESRNVAL--NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCK 268
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
S R+++AF L M+ + P++VT+ L+ +R EV V Q+M + G N
Sbjct: 269 SGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVG---IVLQEMEQLGVSPN 325
Query: 656 DTYLKELIEEWC 667
+ ELI C
Sbjct: 326 EVIYNELIGWHC 337
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 178/422 (42%), Gaps = 80/422 (18%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
+SP Y ++D+ G + + + + ++S+ V + ++ F++L+ V A +
Sbjct: 176 ASPEPY--NEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAV 233
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ G DM +++I++ + C AQ + +KH + DV Y+++
Sbjct: 234 HAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-----FEPDVVVYTSL 288
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + A A +V DM AG+ PN T+S +I++ G + +A +F EM+ AGC
Sbjct: 289 VHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 348
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L++ V+A + ++ +++
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQM------------------------------ 378
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
KR T +YN ++++ C D +A ++N M G++PN
Sbjct: 379 -----------------KRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPN 421
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + +V GA ++ M+E P+ + Y +++ S+ + +
Sbjct: 422 ASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKK 481
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM--WKAGYKANDTYLKELIEE 665
EM Q++PN+ TY L ++++ DM W YK + E++EE
Sbjct: 482 EMDESQVEPNVNTYRIL----------------ISMFCDMKHWNNAYK----LMMEMVEE 521
Query: 666 WC 667
C
Sbjct: 522 KC 523
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 34/264 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + V + + D+ A + K PN+Y +ID CG ++ ++ +
Sbjct: 283 VVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSE 342
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ N FNSLM +V A + L+VY M++LG AD SYN ++++ C
Sbjct: 343 MIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDEN 402
Query: 336 ---------------LAGNTVLAQEIYGEVKHL-EAKGVLKL-----------DVFTYST 368
+A N I+G + L + G ++ + TY+
Sbjct: 403 LEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNI 462
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++++FA+++ M LK+K++M + V PN T+ LI+ + A L EM++
Sbjct: 463 LMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEK 522
Query: 429 C-EPNSQCCNILLQACVEACQFDR 451
C PN +L+ +A Q +
Sbjct: 523 CLRPNLSVYETVLELLRKAGQLKK 546
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 19/242 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + KKR A +D S KH P++ + +++ GD K+ ++ D
Sbjct: 249 VAFSIVISSLCKKRRANEAQSFFD-SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSD 307
Query: 282 LRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ + N+Y ++ +++ AHD V+ M G + ++N L++
Sbjct: 308 MKMAGIKPNVYTYSIVIDSLCRCGQITRAHD------VFSEMIDAGCDPNAVTFNSLMRV 361
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG T ++Y ++K L D +Y+ I++ + + A K+ M+ G
Sbjct: 362 HVKAGRTEKVLKVYNQMKRLGCPA----DTISYNFIIESHCRDENLEEAAKILNLMVKKG 417
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN T++ + A V A ++ M + C+PN+ NIL++ E+ D
Sbjct: 418 VAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVL 477
Query: 454 RL 455
++
Sbjct: 478 KM 479
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 30/316 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ + + + +A V + M S GV T+S+L+ AGL +A+H F M
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
GC P+ +I++ + + + + A F S L ++ + +++ H
Sbjct: 241 DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDS---------LKHRFEPDVVVYTSLVH- 290
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCT--DYYRVKALMN 537
+ S ++ FS KP TY+I++ + C R + +
Sbjct: 291 ---------GWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFS 341
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G PN +++ L+ +G E L++ M+ G D ++Y I+ R +
Sbjct: 342 EMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDE 401
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
L++A + M + PN T+ + ++ LH+V +Y M + + N
Sbjct: 402 NLEEAAKILNLMVKKGVAPNASTFNFIFGCIAK---LHDVNGAHRMYARMKELNCQPNTL 458
Query: 658 YLKELIEEWCEGVIQD 673
L+ + E D
Sbjct: 459 TYNILMRMFAESRSTD 474
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 57/396 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ S + + F ++M + DL L + + M + G S N+++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + D +T++T+V A + A+++ + ML G
Sbjct: 271 KEGRV---EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++S+I+ G V++A+ ++M+ C PN+ N L+ + Q + A L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T SK P
Sbjct: 388 ARVLT-SK----------------------------------------------GILPDV 400
Query: 516 TTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L++ C T +RV L EMR+ G P+ ++ +LID+ G ++ AL +LK
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G + V+ Y T I ++ ++++A +F+EM+ + + N VTY TL+ +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ + Q + M G K + L+ +C G
Sbjct: 521 VEDASQLM---DQMIMEGQKPDKFTYNSLLTHFCRG 553
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 55/358 (15%)
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y FN+L+N A +K +E+ M + G D+ +YN ++ C G A E +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQ 355
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ + + TY+T++ + A ++ + S G+ P+ T++SLI
Sbjct: 356 MITRDCSP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AM LFEEM GCEP+ N+L+ + + D A + + LS ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV- 470
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
TYN L+ C
Sbjct: 471 ----------------------------------------------ITYNTLIDGFCKAN 484
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +EM G+S N +++ LID S VE A Q++ M +G PD Y
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ + R +K+A + + M +P++VTY TL+ + G + + L Q
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 174/386 (45%), Gaps = 35/386 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+++ G+C G + I + + + ++Y +NS+++ ++K +
Sbjct: 293 PDQYTFNTLVN--GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E M + +YN L+ C A E+ + L +KG+L DV T++++
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL---ARVLTSKGILP-DVCTFNSL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + ++A+++ E+M S G P+ T++ LI++ + G +++A+++ ++M +GC
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEH 484
+ N L+ +A + A +F + S+ V DG + R+ +
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQ 526
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
Q I KP TYN L+ C D + ++ M +
Sbjct: 527 LMDQMIMEGQ-----------------KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ LI +G VE A ++L+ ++ G++ AY I+ R ++ +A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEA 629
Query: 603 FSLFEEM-KHYQIQPNLVTYITLLRA 627
+LF EM + + P+ V+Y + R
Sbjct: 630 INLFREMLEQNEAAPDAVSYRIVFRG 655
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/519 (21%), Positives = 212/519 (40%), Gaps = 56/519 (10%)
Query: 236 DLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
D +ALR ++ ASKK SP + I+ G G + R I ED+++ + F
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPF 121
Query: 295 NSLMNVNAHDLKFTLE------VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
L+ A +F L+ V+ + G+ D YN +L N L
Sbjct: 122 LILIESYA---QFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLV----- 173
Query: 349 EVKH--LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
E+ H + G+ K DV T++ ++K A + A+ + EDM S G+ P+ T+++++
Sbjct: 174 EIAHAKMSVWGI-KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G ++ A+ + E+M++ GC ++ N+++ + + + A + +S
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE--MSNQDG 290
Query: 467 ALGEDYDGNTD-----RISNMEHKDK------QSITNTPNFVPNSHYSSFDKRFSFK--- 512
+ Y NT + +++H + Q + + NS S K K
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 513 ------------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
P T TYN L+ C + +A L + + G+ P+ ++ LI
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ N A+++ + MR G PD Y I +L +A ++ ++M+ ++
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG-VIQDKNQN 677
+TY TL+ + + E ++ ++ +M G N LI+ C+ ++D +Q
Sbjct: 471 ITYNTLIDGFCKANKIREAEE---IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527
Query: 678 QGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDL 716
++ + Q+P + H + A D+
Sbjct: 528 MDQMIM----EGQKPDKFTYNSLLTHFCRGGDIKKAADI 562
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 26/338 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN T+I ++ + L S+ + ++ FNSL+ + + +E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G D +YN+L+ + C G E +K +E G + V TY+T++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKL---DEALNMLKQMELSGCAR-SVITYNTLI 477
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A ++ ++M GV+ N++T+++LI+ + VE A L ++M+ G +
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNMEHK 485
P+ N LL +A + ++ T + + V G G R+
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ P+++ F + TT N+ +R NE +
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINL---------FREMLEQNEA-----A 643
Query: 546 PNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPD 582
P+ +S+ I+ C G G + A+ L + E G P+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 184/435 (42%), Gaps = 44/435 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S +Y ++S ++ ++ + L++ F L + +M +L + ++NI+L
Sbjct: 438 HATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIML 495
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG A E+ ++ A TY+T++ F Q AL + +M
Sbjct: 496 RHLCSAGKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ PN T+ ++I+ G V++A+ +F+EML G +P + N L+ + +
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNF 496
D A L+R + + Y DG + + M K T N
Sbjct: 608 DTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666
Query: 497 VPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ N H + + +R + T TY L+ A L +E
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L +EM IQP+LVTY TL+ S G +V+ L + +M G+ L
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKGFNPTLLTYNAL 842
Query: 663 IEEWCEGVIQDKNQN 677
I+ C+ D +N
Sbjct: 843 IQGLCKNGQGDDAEN 857
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 552 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 611
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 612 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 667
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 760
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 761 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 860
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 861 EMVENGITPDDSTYISLIEG 880
>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 689
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 55/342 (16%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F +L+N ++ E++K M++ G+ D+ +Y+ L+ AG + +++
Sbjct: 177 NVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLF 236
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ H KGV KLDV +S+ + V+ + A V + ML G++PN +T++ LI
Sbjct: 237 SQALH---KGV-KLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKG 292
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A ++ ++L+ G EP+ + L+ F + ++ A
Sbjct: 293 LCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDG-------------FCKYGNLRSGFA 339
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
L ED + + P Y +L+ C
Sbjct: 340 LYEDM----------------------------------IKMGYPPDVVIYGVLVDGLCK 365
Query: 528 DYYRVKALMNEMRTVGLS--PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ AL ++T+G S PN + + LID + AL++ ++M G+ PDV
Sbjct: 366 QGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVAT 425
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
TT ++V V RLK+ LF M ++P+ V + TL+ A
Sbjct: 426 ITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDA 467
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 178/452 (39%), Gaps = 60/452 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ +P++ T+ID G ++
Sbjct: 179 VTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 238
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V L +VYK M G+ ++ +Y IL+K C G
Sbjct: 239 ALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGR 298
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A IY ++ K L+ V TYS+++ F + + EDM+ G P+ +
Sbjct: 299 IYEAFGIYCQI----LKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVV 354
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ GL+ A+ + L PN N L+ + D A ++FR
Sbjct: 355 IYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLM 414
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T
Sbjct: 415 GI-----------------------------------------------YGIKPDVATIT 427
Query: 520 ILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
LM+ + R+K L M +GL P+ +++ L+DA + LQ+ +M+
Sbjct: 428 TLMRVTVME-GRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQR 486
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + D+ I + + + +++A F + +++P++VTY T++ Y SL
Sbjct: 487 NKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMI---CGYCSLRR 543
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + +++ + + N L LI C+
Sbjct: 544 LDEAARIFEMLKFTPFGPNAVTLTILIHTLCK 575
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 139/353 (39%), Gaps = 58/353 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G ++ ++ L+ C G A E++ K +E +G+ D+ YST++ + A
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELF---KVMEQRGIAP-DLIAYSTLIDGYFKAGM 228
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
M K+ L GV + + +SS I+ G + A +++ ML G PN I
Sbjct: 229 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTI 288
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L++ CQ R + F
Sbjct: 289 LIKG---LCQDGRIYEAF------------------------------------------ 303
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILI 555
Y KR +P+ TY+ L+ C Y ++ AL +M +G P+ + + +L+
Sbjct: 304 -GIYCQILKR-GLEPSVVTYSSLIDGFCK-YGNLRSGFALYEDMIKMGYPPDVVIYGVLV 360
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G + AL+ + P+VV + + I R R +A +F M Y I+
Sbjct: 361 DGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIK 420
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P++ T TL+R G L E L ++ M+K G + + L++ +C+
Sbjct: 421 PDVATITTLMRVTVMEGRLKE---GLFLFFRMFKMGLEPDAVAFCTLMDAFCK 470
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 124/311 (39%), Gaps = 51/311 (16%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++D+ + + I+K + ++A ++ +L G PN +T+ +LIN G +++A
Sbjct: 140 FRVDIVSCNKILKGLS-VDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 198
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF+ M Q G P+ + L+ +A +LF
Sbjct: 199 ELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLF---------------------- 236
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
S HK + + V S S+ D F TT +++ + C
Sbjct: 237 -SQALHKGVKL-----DVVVFS--STIDVYVKFGYLTTAFDVYKRMLCQ----------- 277
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G+SPN +++TILI G + A I + + G+ P VV Y++ I +
Sbjct: 278 ----GISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGN 333
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHEVQQCLAVYQDMWKAGYKANDT 657
L+ F+L+E+M P++V Y L+ + G LH ++ + + N
Sbjct: 334 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKT----LGQSIRPNVV 389
Query: 658 YLKELIEEWCE 668
LI+ WC
Sbjct: 390 VFNSLIDGWCR 400
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 230/533 (43%), Gaps = 66/533 (12%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 37 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 93
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 94 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 145
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 146 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 201
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 202 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 260
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320
Query: 486 DKQSI---TNTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 380
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 381 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 440
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ ++
Sbjct: 441 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE---IFD 497
Query: 646 DMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLE 698
M G + + LI+ +C K N G+ + + P S +E
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYC------KASNVGQAFKVKGAMEREPISPSIE 544
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 180/408 (44%), Gaps = 26/408 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 225 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 284
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 340
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 341 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQS 489
P N LL+ FD A +++ + K VA E Y D + ME+ + S
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWH--LMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + R F + T+N ++ C V+A + ++M+ +G SP+
Sbjct: 459 ----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
EM + PN+VTY L+ + G L + + Y +M + G AN
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENGLSAN 612
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 170/401 (42%), Gaps = 27/401 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 422 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 481
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+++ Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 542 SIEM----YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ EM + G N C+ ++ + D A L + V G D
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK------MVDHGFFPDHECF 651
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVK 533
S++ + Q I + S D+ + P YNI + C +
Sbjct: 652 LKSDIRYAAIQKIAD-----------SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + G P++ ++ LI +GNV+ A ++ M G+ P++V Y I
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+S+ + +A LF ++ + PN+VTY TL+ + G++
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 801
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 145/363 (39%), Gaps = 30/363 (8%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K++ G ++N ++ C G V A+EI+ ++K L D TY T++
Sbjct: 460 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP----DGITYRTLI 515
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A KVK M ++P+ ++SLI+ + + + L EM G
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKD- 486
PN L+ + D+AF + T LS + G R+ ++ +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG-LYRLGRIDEANL 634
Query: 487 -KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
Q + + F + + D R++ ++ ++E L
Sbjct: 635 LMQKMVDHGFFPDHECFLKSDIRYA-----------------AIQKIADSLDESCKTFLL 677
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+I + I I +G V+ A + ++ G PD Y T I + + +AF L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+EM + PN+VTY L+ + ++ Q+ ++ + + G N LI+
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR---LFHKLHQKGLFPNVVTYNTLIDG 794
Query: 666 WCE 668
+C+
Sbjct: 795 YCK 797
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI + C G A+ + L KG + D FTY T++ ++ A A +++
Sbjct: 683 YNIAIAGLCKTGKVDDARRFF---SMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLR 738
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ML G+ PN +T+++LIN + V++A LF ++ Q G PN N L+ +
Sbjct: 739 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 798
Query: 447 CQFDRAFRL 455
D AF+L
Sbjct: 799 GNMDAAFKL 807
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + D +Y L+ AGN A + E+ +G++ ++ TY+ ++ ++
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR---RGLVP-NIVTYNALINGLCKSEN 765
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A ++ + G+ PN +T+++LI+ G ++ A L ++M++ G P+ QC
Sbjct: 766 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQC 822
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAVKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 132/359 (36%), Gaps = 78/359 (21%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN +ID G C ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLID--GYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA-------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 356 -------------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G LD+ Y+ ++ +F D + ++ DM G P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++IT+++LI+ E + E+M + G +P ++ A + D A +LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK-- 512
+ L H T N + N S +F + S K
Sbjct: 640 KDMGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 513 -------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 678 MKMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID + +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 666 WCE 668
C+
Sbjct: 521 LCQ 523
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ + I + LID G ++ A ++L M+ E+ P+ V Y I R+ +L+ A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLETA 425
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ MK +I+PN+VT T++ R+ H + + + DM K G K N L
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 663 IEEWC 667
I C
Sbjct: 483 IHACC 487
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 172/421 (40%), Gaps = 80/421 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP Y +ID+ G + + + + ++++NV + + F+ L+ V A +
Sbjct: 147 SPQPY--NEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVH 204
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G AD+ +++ ++ C V AQ + +KH + DV Y+++V
Sbjct: 205 AFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH-----KFEPDVIVYTSLV 259
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A V +M AG++PN T+S +I+A +G + +A +F EML AGC
Sbjct: 260 HGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCN 319
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PNS N L++ + A + ++ +++
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQM------------------------------- 348
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
KR TYN L++ C D +A+ +N M +PN
Sbjct: 349 ----------------KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNA 392
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ + S +V GA ++ M+E G P+ V Y +++ K F L +E
Sbjct: 393 SSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKE 452
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM--WKAGYKANDTYLKELIEEW 666
M +++PN TY ++ +A+Y M W Y + +E+I+E
Sbjct: 453 MDEEEVEPNFNTY----------------RELIALYCGMGHWNHAY----MFFREMIDEK 492
Query: 667 C 667
C
Sbjct: 493 C 493
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 213 YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
Y C ADI+ F N + KKR V A +D + KH P++ + +++ GD
Sbjct: 212 YGC---NADIIAFSNVISILCKKRRAVEAQSFFD-NLKHKFEPDVIVYTSLVHGWCRAGD 267
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNI 329
++ +++ +++ ++ N+Y ++ +++ + T +V+ M G + ++N
Sbjct: 268 ISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNN 327
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L++ AG T ++Y ++K L D+ TY+ +++ A+KV M
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAA----DLITYNFLIETHCKDDNLGEAIKVLNSM 383
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
TPN +++ + A + V A +F M + GC+PN+ NIL++
Sbjct: 384 AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSA 443
Query: 450 DRAFRL 455
D F+L
Sbjct: 444 DMIFKL 449
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ + V + + D+ A + K SPN+Y +ID G ++ ++ +
Sbjct: 253 IVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAE 312
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ N FN+L+ V+ A + L+VY M++L AD+ +YN L++ C N
Sbjct: 313 MLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDN 372
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + AK + +++ I + A ++ A ++ M G PNT+
Sbjct: 373 LGEAIKVLNSM----AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV 428
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ L+ A + L +EM + EPN L+ ++ A+ FR
Sbjct: 429 TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFR 486
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 160/393 (40%), Gaps = 57/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F VR + + A+ A++ + + + ++ +I + +++++ +++
Sbjct: 184 VTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDN 243
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ + ++ V+ SL++ A D+ V++ M+ G+ ++ +Y+I++ A C +G
Sbjct: 244 LKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +++ E+ L+A + T++ +++V A + L+V M + I
Sbjct: 303 ITRAHDVFAEM--LDAG--CNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 358
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI + +A+ + M + C PN A F+ FR
Sbjct: 359 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPN-------------ASSFNPIFRC---- 401
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+A +D +G + M K KP T TYN
Sbjct: 402 ------IAKSQDVNGAHRMFARM------------------------KEVGCKPNTVTYN 431
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMRE 576
ILM+ A + L EM + PN ++ LI G G+ A + ++ E
Sbjct: 432 ILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDE 491
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ P + Y ++ ++ +LK+ L ++M
Sbjct: 492 KCIKPSMPLYKMVLEELRKAGQLKKHEELVDKM 524
>gi|168038568|ref|XP_001771772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676903|gb|EDQ63380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 614
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 177/412 (42%), Gaps = 36/412 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL Y+A K P++ T+I C + I ++ + V ++ + +LM
Sbjct: 203 ALSIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMA 262
Query: 300 V------------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ A L+ L++Y+ MQ + D +YN L+ A A EIY
Sbjct: 263 LVVKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIY 322
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + A GV D FT+S I++ A ++AL+V E+M +AGV P T T++ LI A
Sbjct: 323 ---RTMVAAGVPP-DQFTFSFILESAAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEA 378
Query: 408 CANAGL--VEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
CA+A E+A LFEEM G PN+Q N L+ A + RA + + S
Sbjct: 379 CASAPYPDAEKAWALFEEMKTIEGVVPNAQTYNHLITASCKGGDNARALKAYELMWNSGY 438
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILM 522
Q A+ + +K QS + T S + K +KP TY+ L+
Sbjct: 439 QRAV----------TTATFNKLIQSASQTEGL--ESALKMYRKMLDAGYKPDAITYSTLV 486
Query: 523 KAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC D + ++ EM +G+ PN + LI A G +G E A+ ++++E
Sbjct: 487 VACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWEDAVATFRVLQEGEEQ 546
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
V+Y+ C K +A + +I P + I L S +G
Sbjct: 547 LTSVSYSIIFDACF-GKGGAEAVLKRTKPGKLEIHPGVEAAIGLYNEASEFG 597
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 161/366 (43%), Gaps = 55/366 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L +Y+ M+ GV+ + +YN L+ C A A I E +EA GV K DV TY+
Sbjct: 204 LSIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAE---MEASGV-KPDVVTYTA 259
Query: 369 IVKVF----------ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ + + A+ + AL++ ++M + P++IT+++L+ A A A + E+ +
Sbjct: 260 LMALVVKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVL 319
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++ M+ AG P+ + +L++ + A +F R
Sbjct: 320 EIYRTMVAAGVPPDQFTFSFILESAAAGGRLKVALEVFEEM------------------R 361
Query: 479 ISNMEHKDKQSITNTPNFV----PNSHYSSFDKRFSF----------KPTTTTYNILMKA 524
+ + K TNT NF+ ++ Y +K ++ P TYN L+ A
Sbjct: 362 AAGVAPK-----TNTFNFLIEACASAPYPDAEKAWALFEEMKTIEGVVPNAQTYNHLITA 416
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTI--LIDACGGSGNVEGALQILKIMREDGMS 580
C +AL M G + T LI + + +E AL++ + M + G
Sbjct: 417 SCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLESALKMYRKMLDAGYK 476
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD + Y+T + C R+ L+QA S+ +EM+ ++PN V +L+ A + G +
Sbjct: 477 PDAITYSTLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWEDAVAT 536
Query: 641 LAVYQD 646
V Q+
Sbjct: 537 FRVLQE 542
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 526 CTDYYRVKALMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
C+ ++NEM+ G+ + N ++ LI C + AL I + M++ G+ P V+
Sbjct: 161 CSSLSEALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDAGVIPSVL 220
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA-------RSRYGSLHEV 637
Y T I C ++KRL+ A+ + EM+ ++P++VTY L+ R R +
Sbjct: 221 TYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMALVVKTGPYRGRSSPAQRL 280
Query: 638 QQCLAVYQDM 647
++ L +YQ+M
Sbjct: 281 EKALQLYQEM 290
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 34/325 (10%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K+ + K V Y+ +KV +++ ++ A K+ ++ML GV P+ IT+S+L+N +
Sbjct: 143 LKYFQPKINPAKHVVLYNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCAS 202
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSK- 463
+GL +A+ LFE+M GCEP+ C+ ++ A D+A L+ +W+L
Sbjct: 203 VSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAV 262
Query: 464 TQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T L + Y GN D+ + Y K KP TYN L
Sbjct: 263 TFSTLIKMYSMAGNYDKCLEV-------------------YQEM-KVLGVKPNVATYNTL 302
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A + + KA+ EM++ G+SP+ I++ L++ + E AL + K M+ +GM
Sbjct: 303 LGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGM 362
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQ 638
Y + +C +A +F EMK QP+ T+ +L+ SR G + EV+
Sbjct: 363 DMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVE 422
Query: 639 QCLAVYQDMWKAGYKANDTYLKELI 663
L +M ++G++ + LI
Sbjct: 423 GML---NEMIQSGFQPTIFVMTSLI 444
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F ++ + + L Y K PN+ T++ + +++AI+++
Sbjct: 262 VTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKE 321
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++S V+ + + SL+ V A + L VYK M+ G+ YN LL C G
Sbjct: 322 MKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGY 381
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A EI+ E+K + G + D +T+S+++ +++ + + +M+ +G P
Sbjct: 382 TDRAVEIFYEMK---SSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIF 438
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+SLI A + + +F+++L G PN C LL
Sbjct: 439 VMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLL 479
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V + + ++ A+ YD +K S + T+I + + G+Y K +Y++++
Sbjct: 232 MVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLG 291
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +N+L+ K ++K M+ GV D +Y LL+ A + A
Sbjct: 292 VKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDAL 351
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV-TPNTITWSS 403
+Y E+K G + + Y+ ++ + AD + A+++ +M S+G P++ T+SS
Sbjct: 352 GVYKEMK---GNG-MDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSS 407
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
LI + +G V + + EM+Q+G +P L++ +A + D ++F+
Sbjct: 408 LITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFK 461
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 147/349 (42%), Gaps = 56/349 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + M ++G+ +M N L+K C G A+ ++ V ++ LK D ++Y+T
Sbjct: 352 VRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF--VGMVDWN--LKPDCYSYNT 407
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A + E+ML G+TP +T++++I + G + A+HL+ M++ G
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN C +L + DRA L++ LG
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKE--------ILGR------------------ 501
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F +T +N ++ C A+ + M+ +GLSP
Sbjct: 502 ---------------------GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ L D +GNV+ A QI +M MS + Y + I + ++L L
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
EM+ + PN+VTY TL+ S + ++ + +Y +M + G+ N
Sbjct: 601 VEMQTRGLSPNVVTYGTLI---SGWCDEQKLDKAFHLYFEMIERGFTPN 646
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 176/393 (44%), Gaps = 24/393 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN C T++D GD ++ +++++ + T + FN++++ L
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M++LG+ D +Y L C GN QE + ++K + + + + Y++++
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGN---VQEAF-QIKGVMERQAMSASIEMYNSLI 584
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +M + G++PN +T+ +LI+ + +++A HL+ EM++ G
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFT 644
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN C+ ++ + L+R +S+ V L + D + + N + DK +
Sbjct: 645 PNVVVCSKIVSS------------LYRDDRISEATVILDKMLDFDILAVHN-KCSDKL-V 690
Query: 491 TNTPNFVPNSHYSSFDKR--FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
N S DK + YNI + C +++++ + + G P
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ ++ LI AC SGNV+ A ++ M E G+ P++ Y I + + +A LF
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ + PN VTY L+ R G L + +
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 148/381 (38%), Gaps = 24/381 (6%)
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VF+ LM A K L V+ M ++G + + S + LL G +A ++ ++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
G++ DV+ S +V +A++V E M+ G+ PN +T++ L+N
Sbjct: 218 V---GTGIVP-DVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVG 273
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G E + M + G N C +L++ + + D A +L R + V
Sbjct: 274 RGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDER 333
Query: 471 DYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
Y D M +D I + R K N L+K C
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEM------------LRVGLKVNMVICNTLIKGYCKLG 381
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + M L P+ S+ L+D G V A + + M DG++P VV Y
Sbjct: 382 QVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYN 441
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T IK V A L+ M + PN ++ T+L + G + + + +++++
Sbjct: 442 TVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMG---DSDRAMMLWKEI 498
Query: 648 WKAGYKANDTYLKELIEEWCE 668
G+ + +I C+
Sbjct: 499 LGRGFTKSTVAFNTMISGLCK 519
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 174/432 (40%), Gaps = 36/432 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y+C +++ G + + E + + + N+ +N L+N V D + V
Sbjct: 224 PDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERV 283
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV ++ + +L++ C G A+++ EV+ E +L +D Y +V
Sbjct: 284 LRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDE---LLVVDERVYGVLVD 340
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A++++++ML G+ N + ++LI G V +A +F M+ +P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL + +AF L + LG DG T + K +
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFML--------CEEMLG---DGITPTVVTYNTVIK-GLV 448
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---------DYYRVKALMNEMRTV 542
+ ++ H P + CCT D R L E+
Sbjct: 449 DVGSYDDALHLWHLMVERGVTPNEIS-------CCTMLDCFFKMGDSDRAMMLWKEILGR 501
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G + + +++ +I G + A + M+E G+SPD + Y T ++ +++A
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F + M+ + ++ Y +L+ + L++V L +M G N L
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLV---EMQTRGLSPNVVTYGTL 618
Query: 663 IEEWCEGVIQDK 674
I WC+ DK
Sbjct: 619 ISGWCDEQKLDK 630
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 158/398 (39%), Gaps = 76/398 (19%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ G+ D A+R D + NM IC T+I Y K + E R
Sbjct: 344 QMGRMED---AVRIRDEMLRVGLKVNMVICNTLIK------GYCKLGQVCEAER------ 388
Query: 290 NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT----VLAQE 345
V+ M + D SYN LL C G +L +E
Sbjct: 389 ---------------------VFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ G+ G+ V TY+T++K D + AL + M+ GVTPN I+ +++
Sbjct: 428 MLGD-------GITP-TVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
+ G ++AM L++E+L G ++ N ++ + + A +F + LS
Sbjct: 480 DCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLS 539
Query: 463 KTQV---ALGEDY--DGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
++ L + Y +GN ++ ++Q+++ + + S D F +
Sbjct: 540 PDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEM----YNSLIDGLFKIRKLND 595
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++L+ EM+T GLSPN +++ LI ++ A + M E
Sbjct: 596 VTDLLV---------------EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G +P+VV + + R R+ +A + ++M + I
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI + C +G A+ + + L ++G L D FTY T++ + + A K++
Sbjct: 720 YNIAIDGLCKSGKLDEARSV---LSVLMSRGFLP-DNFTYCTLIHACSVSGNVDEAFKLR 775
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ML G+ PN +++LIN G +++A LF ++ Q G PN+ NIL+
Sbjct: 776 DEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835
Query: 447 CQFDRAFRLFRSWT 460
D+A RL T
Sbjct: 836 GDLDKASRLREKMT 849
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 7/185 (3%)
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVG 543
D N + +H S K F F + +++LMKA AL +EM +G
Sbjct: 129 DLHCTNNYRAYAVCNHVFSVYKEFGF--CSGVFDMLMKAFAERGMTKHALYVFDEMSRIG 186
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P S + L+ G A+ + + G+ PDV + + + R+ A
Sbjct: 187 RVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAM 246
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ E+M ++PN+VTY L+ G V++ L + M + G N L+
Sbjct: 247 EVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRL---MSERGVSRNVVTCTMLM 303
Query: 664 EEWCE 668
+C+
Sbjct: 304 RGYCK 308
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 221/503 (43%), Gaps = 60/503 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 127
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 128 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 179
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 180 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 235
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 236 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 486 DKQSIT---NTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 474
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ ++
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE---IFD 531
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
M G + + LI+ +C+
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCK 554
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 180/409 (44%), Gaps = 28/409 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 374
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLS-KTQVALGE-DYDGNTDRISNMEHKDKQ 488
P N LL+ FD A ++ W L K VA E Y D + ME+ +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQI---WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 491
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
S + + R F + T+N ++ C V+A + ++M+ +G SP
Sbjct: 492 S----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
EM + PN+VTY L+ + G L + + Y +M + G AN
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENGLSAN 646
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 185/436 (42%), Gaps = 31/436 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+++ Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 576 SIEM----YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYD 473
+ EM + G N C+ ++ + D A L + + L D
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691
Query: 474 -GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--------RF-------SFKPTTTT 517
+I++ + ++ N V N + K RF F P T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ + + L +EM GL PN +++ LI+ S NV+ A ++ +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV Y T I + + AF L ++M I P++VTY L+ ++G
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG--- 868
Query: 636 EVQQCLAVYQDMWKAG 651
++++ + + M KAG
Sbjct: 869 DIERSMKLLNQMIKAG 884
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 145/363 (39%), Gaps = 30/363 (8%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K++ G ++N ++ C G V A+EI+ ++K L D TY T++
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP----DGITYRTLI 549
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A KVK M ++P+ ++SLI+ + + + L EM G
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKD- 486
PN L+ + D+AF + T LS + G R+ ++ +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG-LYRLGRIDEANL 668
Query: 487 -KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
Q + + F + + D R++ ++ ++E L
Sbjct: 669 LMQKMVDHGFFPDHECFLKSDIRYA-----------------AIQKIADSLDESCKTFLL 711
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+I + I I +G V+ A + ++ G PD Y T I + + +AF L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+EM + PN+VTY L+ + ++ Q+ ++ + + G N LI+
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR---LFHKLHQKGLFPNVVTYNTLIDG 828
Query: 666 WCE 668
+C+
Sbjct: 829 YCK 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 189 KELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
K +D F C K D IRYA I AD L D S
Sbjct: 672 KMVDHGFFPDHECFLKSD----IRYAAIQKIADSL---------------------DESC 706
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K PN + I + G+C G +R + L + + + + +L++ A +
Sbjct: 707 KTFLLPNNIVYN--IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + M + G++ ++ +YN L+ C + N AQ ++ + L KG+ +V
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK---LHQKGLFP-NVV 820
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A K+K+ M+ G++P+ +T+S+LIN G +E++M L +M
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++AG + L+Q + + + + +L+
Sbjct: 881 IKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 50/224 (22%)
Query: 389 MLS-AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
MLS G P+ T+ +LI+ + AG V++A L +EML+ G PN N L+ ++
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 798
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRA RLF HK Q
Sbjct: 799 NVDRAQRLF---------------------------HKLHQK------------------ 813
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYN L+ C + L ++M G+SP+ ++++ LI+ G++E
Sbjct: 814 --GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++++L M + G+ ++ Y T ++ +RS +++ L++ M
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 171/412 (41%), Gaps = 56/412 (13%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ G+ + A R ++ + +Y +I G G + ++ +++ ++ +
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 288 TLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ +N++++ + K + + MQ+ GV D ++N LL C G A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E+ + ++ DVF+Y+T++ +A ++ M + PN +++S++
Sbjct: 360 NLFDEMTNRR----IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A AG ++A++LF EM G + N LL + + + A + R
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE------ 469
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
++G K TYN L+
Sbjct: 470 MASVG-----------------------------------------IKKDVVTYNALLGG 488
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
Y VK + EM+ + PN ++++ LID G + A++I + + G+ D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
VV Y+ I ++ + A SL +EM I PN+VTY +++ A R ++
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 179/449 (39%), Gaps = 91/449 (20%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC----- 313
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
KG ++ + + K F ++M GV P+ I
Sbjct: 314 ---------------GKGGME-----FKQVAKFF-------------DEMQRNGVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + PN V S T +
Sbjct: 401 PVKRIM----------------------------PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR +G++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++++ AG +A+ LI+ C+
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A+ +++ K++ PN+ +ID CG G ++ + ++++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + K ++ +V +YST++ FA A + AL + +M G+ + ++
Sbjct: 391 DLAFEI---LAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF---- 502
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T++ KR P TY+
Sbjct: 503 ---TEM----------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS + ++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 53/310 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S ++ + + + A+ V M G+ PN +T++++I+AC G+ +Q F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM + G +P+ N LL C ++ A LF D ++N
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF--------------------DEMTN 367
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ +Q + FS YN L+ A C A ++ +M
Sbjct: 368 --RRIEQDV------------------FS-------YNTLLDAICKGGQMDLAFEILAQM 400
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ PN +S++ +ID +G + AL + MR G++ D V+Y T + + + R
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A + EM I+ ++VTY LL + G EV++ V+ +M + N
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK---VFTEMKREHVLPNLLTY 517
Query: 660 KELIEEWCEG 669
LI+ + +G
Sbjct: 518 STLIDGYSKG 527
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 29/306 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+ID G + ++ ++ ++R + L+ +N+L+++ + L++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M +G+ D+ +YN LL G ++++ E+K + VL ++ TYST++
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR---EHVLP-NLLTYSTLID 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+++ + SAG+ + + +S+LI+A GLV A+ L +EM + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGN---------TDRIS 480
N N ++ A + DR+ +L + AL + +GN T +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 481 NMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
N KD Q ++ H + KP T++ ++ AC C +
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMH------QLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 535 LMNEMR 540
L+ E+R
Sbjct: 697 LLEELR 702
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G V A +I + G V A++ I RS ++A S+F MK
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
Y ++PNLVTY ++ A + G E +Q + +M + G + + L+ G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 672 QDKNQN 677
+ +N
Sbjct: 355 WEAARN 360
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 294 FNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F+SL+N + KF +E + M G ++ +YN ++K C G T +A G +K
Sbjct: 157 FSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA---VGLLK 213
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ G + D+ Y+TI+ + AL + ++ GV P+ T+S L++ N+
Sbjct: 214 KMDKAGG-RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNS 272
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
E+A LF EM+ P+ NIL+ +L + LS+ Q
Sbjct: 273 DQKEEASALFNEMMSLNIMPDVVTFNILVD------------KLCKEGMLSEAQ------ 314
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSH---YSSFDKRFSFK--------PTTTTYNI 520
I M K + T N + N + F+ R F P +YNI
Sbjct: 315 -----GIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C + L +EM GL PN ++ LI +G A ++ K M+ G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
SPD+V T + + L A LF M+ ++PNLVTY L+RA + G ++
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVF ++ ++ F+ + A V ++ G P+ +T+SSLIN +AM F
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG-----EDYDGNT 476
+EM+ +G +PN N +++ + + KT VA+G + G
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCK---------------IGKTTVAVGLLKKMDKAGGRP 222
Query: 477 D-----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D I + KD+ F S K +P TY+ILM C +
Sbjct: 223 DIVIYNTIIDGLCKDRLVSEALDIF-------SEIKGKGVRPDVFTYSILMHGLCNSDQK 275
Query: 532 --VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
AL NEM ++ + P+ +++ IL+D G + A I+KIM E G+ P+ Y +
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ ++ +A +F+ M PN+V+Y L+ + + E ++ ++ +M
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE---LFDEMSF 392
Query: 650 AGYKANDTYLKELIEEWCEG 669
G N LI C+
Sbjct: 393 RGLIPNTFNYNTLISGLCQA 412
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYED 281
FC + GK V L+ D K P++ I TIID G+C D + S A I+ +
Sbjct: 199 FC----KIGKTTVAVGLLKKMD---KAGGRPDIVIYNTIID--GLCKDRLVSEALDIFSE 249
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + V +++ ++ LM+ N+ + ++ M L +M D+ ++NIL+ C G
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309
Query: 340 TVLAQEI---------------YGEV--------KHLEAKGVLKL--------DVFTYST 368
AQ I Y + K EA+ V +V +Y+
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+ A ++ ++M G+ PNT +++LI+ AG +A LF++M G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
C P+ C ILL + + D A RLFR+
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P T++ L+ C + + R +EM G PN ++ +I G
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK M + G PD+V Y T I + + + +A +F E+K ++P++ TY L+
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
E A++ +M + L+++ C EG++ +
Sbjct: 267 HGLCNSDQKEEAS---ALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSE 312
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 268 ICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMAD 323
+C + M S A I + + + V N +NSLMN K V+ M G M +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYNIL+ C A A+E++ E + +G++ + F Y+T++ A A
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDE---MSFRGLIP-NTFNYNTLISGLCQAGRHCEAR 419
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ +DM + G +P+ +T + L+++ G ++ A+ LF M + +PN +IL++A
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 506 DKRFSFK--------PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILI 555
D FSF P ++ L+ A Y V +L + + + + + ILI
Sbjct: 67 DALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILI 126
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ V+ A +L + + G PD V +++ I + +A F+EM Q
Sbjct: 127 NCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PNL TY T+++ + G + + + + M KAG + + +I+ C+
Sbjct: 187 PNLHTYNTIIKGFCKIG---KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 168/396 (42%), Gaps = 42/396 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M +L + ++NI+L+ C AG A E+ ++ A TY+T++
Sbjct: 28 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA--------VTYNTVI 79
Query: 371 KVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG- 428
F Q AL + +M G+ PN T+ ++I+ G V++A+ +F+EML G
Sbjct: 80 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY---------DGNT--- 476
+P + N L+ + + D A L+R + + Y DG
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 477 -DRISNMEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+ + M K T N + N H + + +R + T TY L+
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIY 257
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A L +E G+ P+ + + LI++ SGN++ A +I+ M + ++P
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T ++ R+ +A L +EM IQP+LVTY TL+ S G +V+ L
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG---DVKDAL 374
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ +M G+ LI+ C+ D +N
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 410
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 105 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 164
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G A E+ V+ + KG L DVFTY+ +
Sbjct: 165 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEMGGKG-LAPDVFTYNIL 220
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T++SLI A + G V++ LF+E ++ G
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 313
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 314 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 353
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 354 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 413
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 414 EMVENGITPDDSTYISLIEG 433
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 199/431 (46%), Gaps = 38/431 (8%)
Query: 270 GDYMKSRAIYEDLR-SQNVTL---NIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
G +++ I+ D++ + + L NI FN ++ + L+ + ++M++ G + +
Sbjct: 270 GKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLME 329
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYNI L G + AQ +K + KG+ + ++++++T++ A
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQL---ALKEMVDKGI-EPNIYSFNTVMDGLCKNGLISDAR 385
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ M+S+G+ P+T+T+S+L++ C + G V +A ++ EM++ GC PN+ CNILL +
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445
Query: 444 VEACQFDRAFRLF-----RSWTLSKTQVALGED-------YDGNTDRISNMEHKDKQSIT 491
+ + A +L RS+ L + D D + + M ++
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALG 505
Query: 492 NTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSP 546
N N F+ SS K+ P TY+I++ C D R K + EM L P
Sbjct: 506 NLGNSFIGLVDSSSNGKKCL--PDLITYSIIINGLCKAGRLDEARKKFI--EMVGKSLHP 561
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + I + G + A ++LK M + G + + Y + I ++ + + L
Sbjct: 562 DSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLL 621
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++MK I PN+ TY ++ G ++ ++ +M + G N + + LI+ +
Sbjct: 622 DDMKEKGITPNICTYNNMISCLCEGG---RIKDATSLLDEMLQKGISPNISSFRLLIKAF 678
Query: 667 CE----GVIQD 673
C+ GV+++
Sbjct: 679 CKASDFGVVKE 689
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 180/398 (45%), Gaps = 25/398 (6%)
Query: 279 YEDLRSQNVTLN---IYVFNSLMNVNAHDLK---FTLEVYKNMQKLGVMADMASYNILLK 332
++ RSQ V N +Y++N ++ + + K F+ +YK+M GV + + N+L+
Sbjct: 102 FQSFRSQ-VPANPPPVYLYNMVLESSLREDKVDSFSW-LYKDMVVAGVSPETYTLNLLIA 159
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +G A+E++ + + KG + + F++ +V+ + A AL++ + M S
Sbjct: 160 GLCDSGRFEDAREVFDK---MGVKGC-RPNEFSFGILVRGYCRAGLSMRALELLDGMGSF 215
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV PN + +++LI++ G E+A L E M + G P+ N + A A + A
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA 275
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R+FR + + LG T +E K+ + + S KR
Sbjct: 276 SRIFRDMQIDEE---LGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM-----KRNGNL 327
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+YNI + + ++A + EM G+ PN S+ ++D +G + A I
Sbjct: 328 MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ +M G+ PD V Y+T + C + ++ +A ++ EM PN T LL + +
Sbjct: 388 MGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + E ++ L Q M + Y ++ +I+ C+
Sbjct: 448 EGRIFEAEKLL---QKMNERSYDLDNVTCNIVIDGLCK 482
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T T N+L+ C + + + ++M G PN S+ IL+ +G AL++
Sbjct: 149 PETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL 208
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G+ P+ V Y T I R R ++A L E M+ + P++VT+ + + A
Sbjct: 209 LDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS 268
Query: 631 YGSLHEVQQCLAVYQDMWKAGY-KANDTYLKELIEEWC-EGVIQD 673
G + E + Q + G + N T ++E +C EG++++
Sbjct: 269 AGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEE 313
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 56/377 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 708 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 768 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 880
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 881 VGDAF--------------------------------------------TYNTLIHGYCQ 896
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 897 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 956
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ-CLAVY 644
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E + C +
Sbjct: 957 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016
Query: 645 QDMWKAGYKANDTYLKE 661
+D + + D L++
Sbjct: 1017 EDGFMPSERIYDETLRD 1033
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 45/423 (10%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 667 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 723 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 782 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
+++ R L E CL ++ + + G K + +I C +Q + L
Sbjct: 960 IIQGLCRTDKLKEA-WCL--FRSLTRKGVKPDAIAYITMISGLCRKGLQREADK-----L 1011
Query: 684 CRR 686
CRR
Sbjct: 1012 CRR 1014
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 142/354 (40%), Gaps = 55/354 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ V+N+L++ +L LE+ M+K G+ AD+ +YN LL C +G A +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + DV T++ ++ VF A ++ ++M+ + V PN +T++S+IN
Sbjct: 235 RDM----MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A F+ M GC PN N L+ + D +LF+ +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE----- 345
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC- 526
F TYN L+ C
Sbjct: 346 ------------------------------------------GFNADIFTYNTLIHGYCQ 363
Query: 527 TDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
RV + M + ++P+ I+ IL+ +G +E AL MRE +VA
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y I ++ ++++A+ LF + ++P+ TY ++ + G E +
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 664 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 716
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 717 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 773
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 774 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 832
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 833 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 885
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 63/340 (18%)
Query: 290 NIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+I F SL++ VN F+L + M K G ++ YN L+ C G +A E
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVIL--MVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E +E KG L DV TY+T++ + W A ++ DM+ + P+ +T+++LI
Sbjct: 198 LLNE---MEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ G +++A L++EM+Q+ +PN+ N ++ C R + +++ L ++
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING---LCMHGRLYDAKKTFDLMASK 310
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
P TYN L+
Sbjct: 311 GCF--------------------------------------------PNVVTYNTLISGF 326
Query: 526 CTDYYRV----KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +R+ L M G + + ++ LI G + AL I M ++P
Sbjct: 327 CK--FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
D++ + + + ++ A F++M+ + +V Y
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++P YN L+ C + AL +NEM GL + +++ L+ SG A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L+ M + ++PDVV +T I V V+ L +A L++EM + PN VTY +++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRT 687
+G L++ ++ + M G N LI +C+ + D+ + C
Sbjct: 291 LCMHGRLYDAKK---TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 688 NSQ 690
N+
Sbjct: 348 NAD 350
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 508 RFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ ++P+ T+ L+ C D + + LM + G PN + + LID +G
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK---SGYEPNVVVYNTLIDGLCKNG 190
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL++L M + G+ DVV Y T + S R A + +M I P++VT+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ + G+L E Q+ +Y++M ++ N+ +I C
Sbjct: 251 ALIDVFVKQGNLDEAQE---LYKEMIQSSVDPNNVTYNSIINGLC 292
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ D LR D K+ ++ P++ +IDV G+ +++ +Y+++ +V N
Sbjct: 225 GRWSDAARMLR--DMMKRSIN-PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 292 YVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+NS++N +D K T ++ M G ++ +YN L+ C + E
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFC---KFRMVDEG 335
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + +G D+FTY+T++ + ++AL + M+S VTP+ IT L++
Sbjct: 336 MKLFQRMSCEG-FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +E A+ F++M ++ NI++ +A + ++A+ LF
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ + L+ A Y V +M G+S + S+TILI + AL +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + + R+ AFSL M +PN+V Y TL+ +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G E+ L + +M K G A+ L+ C
Sbjct: 189 NG---ELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 186/429 (43%), Gaps = 50/429 (11%)
Query: 282 LRSQNVTLNIYVFNSLMN------VNAHDLKFTLEV----------YKNMQKLGVMADMA 325
++SQ++ +IY FN +++ N + T V + N K+ V+ D+
Sbjct: 105 VQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVY 164
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
S+ I++K CC AG + ++ E++ +V Y+T++ + A +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFG----FSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+M G+ N T++ LI+ G+ +Q ++E+M + G PN N ++ +
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCK 280
Query: 446 ACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--S 500
+ AF++F R +S V G + E + + PN +
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLIT 340
Query: 501 HYSSFD------------------KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMR 540
+ + D K P+ TYNIL+ C D ++ EM
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRL 599
G+ P+ +++TILID S N+E A+Q+ M E G++PDV Y+ I C++ R+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG-RM 459
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LF+ M + +PN V Y T++ + GS + + L ++++M + N
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY---RALRLFREMEEKELPPNVASY 516
Query: 660 KELIEEWCE 668
+ +IE C+
Sbjct: 517 RYMIEVLCK 525
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 181/439 (41%), Gaps = 74/439 (16%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A +V + M S G+ PN IT+++
Sbjct: 288 FKVFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLS 462
LI+ + +A+ L ++ G P+ NIL+ C +
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG---------------- 387
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
D G + ME + KP+ TY IL+
Sbjct: 388 --------DTSGAGKVVKEMEER------------------------GIKPSKVTYTILI 415
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA L + M +GL+P+ ++++LI G + A ++ K M E
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V Y T + + +A LF EM+ ++ PN+ +Y ++ + E +
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE-- 533
Query: 641 LAVYQDMWKAGYKANDTYL 659
+ + M +G +D+ L
Sbjct: 534 -GLVEKMIDSGIGPSDSIL 551
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DV ++ IK C + ++++F L E++ + PN+V Y TL+ + G E+++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG---EIEKAK 218
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
++ +M K G AN+ LI G+ ++ + QG
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLI----HGLFKNGIKKQG 252
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 22/311 (7%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ +K+F K ++ A K+ ++ML GV PN IT+S++I+ + L +A+ FE
Sbjct: 181 VILYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFE 240
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M GCEP++ C+ ++ A D A RL+ K V +T S +
Sbjct: 241 MMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHV--------DTAVFSGL 292
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ + N+V + + K KP TTYN L+ A KA+ EM
Sbjct: 293 ----IKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMI 348
Query: 541 TVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GLSPN ++ L+ A C N + AL + K M+E G D++ Y +C +
Sbjct: 349 SNGLSPNWPTYAALLQAYCRARFNRD-ALNVYKEMKEKGKDLDILLYNMLFDMCANVGCV 407
Query: 600 KQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A +FE MK P+ TY +L+ S G + E++ A++ +M ++G++ N
Sbjct: 408 DEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGKILEME---AMFNEMMESGFEPNIIV 464
Query: 659 LKELIEEWCEG 669
L L+ C G
Sbjct: 465 LTSLVH--CYG 473
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F ++ +G + V L Y+ K + PN+ ++ G ++AIY ++
Sbjct: 288 VFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEM 347
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S ++ N + +L+ A + L VYK M++ G D+ YN+L C G
Sbjct: 348 ISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCV 407
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTI 399
A +I+ +H+++ G D FTY++++ +++ K +M E M+ +G PN I
Sbjct: 408 DEAVKIF---EHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNE-MMESGFEPNII 463
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+SL++ A + + +F +++ G P+ + C+ LL A +
Sbjct: 464 VLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQ 509
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR YD +K + + +I + G+ G+Y+ +Y D++ N+ +N+L+
Sbjct: 270 ALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLY 329
Query: 300 V-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
A D K +Y M G+ + +Y LL+A C A A +Y E+K
Sbjct: 330 AMGRAKRARDAK---AIYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKE-- 384
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV-TPNTITWSSLINACANAGL 413
KG LD+ Y+ + + A+ A+K+ E M S+G P++ T++SLIN ++ G
Sbjct: 385 -KGK-DLDILLYNMLFDMCANVGCVDEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGK 442
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + +F EM+++G EPN L+ +A + D ++F
Sbjct: 443 ILEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIF 485
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 167/414 (40%), Gaps = 64/414 (15%)
Query: 179 EVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRY---ACIVPRADILFCNFVREFGKKR 235
E+L+ V E D F I+ VN LA+ Y R IL+ ++ F K +
Sbjct: 137 EILKVLGDSVLEPDAVF-ILNSMVNPYTALLAVEYFKQKVKSVRHVILYNVTLKLFRKVK 195
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS------QNVTL 289
D A + +D +PN+ T+I +C K+ +E + S NV
Sbjct: 196 DFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFEMMPSFGCEPDNNVCS 255
Query: 290 N-IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ IY + N + L +Y + D A ++ L+K ++GN V +Y
Sbjct: 256 SMIYAYTRTGNTD-----MALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYN 310
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++K L AK L TY+ ++ AK + A + +M+S G++PN T+++L+ A
Sbjct: 311 DMKVLGAKPNLT----TYNALLYAMGRAKRARDAKAIYGEMISNGLSPNWPTYAALLQAY 366
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
A A+++++EM + G + + N+L C D A ++F
Sbjct: 367 CRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIF------------ 414
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
EH K S T P+ F++ Y+ + K
Sbjct: 415 --------------EHM-KSSGTCPPD------------SFTYASLINMYSSIGKI---- 443
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++A+ NEM G PN I T L+ G + + ++I + + G+SPD
Sbjct: 444 -LEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPD 496
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI G SGN G L + M+ G P++ Y + R+KR + A +++ EM
Sbjct: 292 LIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMISNG 351
Query: 614 IQPNLVTYITLLRA--RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGV 670
+ PN TY LL+A R+R+ + L VY++M + G K D L ++ + C V
Sbjct: 352 LSPNWPTYAALLQAYCRARFN-----RDALNVYKEMKEKG-KDLDILLYNMLFDMCANV 404
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 185/438 (42%), Gaps = 62/438 (14%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R I +L + N+ +N + L + F V+ + K+G + D ++ L K
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGL-------IPFAFSVFAKILKMGYVPDTITFTTLSK 163
Query: 333 ACCLAG---------NTVLA------QEIYGEVKHL-----EAKGVLKL----------- 361
CL G + V+A Q YG + H E + L L
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V Y+TI+ K A + +M+S G++P+ +T+S+LI+ G ++ A+ LF
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDR 478
+M+ +P+ NIL+ A + + F + + V DG
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG---Y 340
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
E +SI NT + P +Y+I++ C + L
Sbjct: 341 CLVKEVNKAKSIFNTM------------AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM + P+ ++++ LID SG + ALQ++ M + G+ P++ Y + + ++
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKT 448
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++ +A +L + K QP++ TY L++ + G L + ++ V++D+ GY +
Sbjct: 449 HQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK---VFEDLLVKGYNLDV 505
Query: 657 TYLKELIEEWC-EGVIQD 673
+I+ +C EG+ +
Sbjct: 506 YAYTIMIQGFCVEGLFNE 523
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 158/362 (43%), Gaps = 23/362 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M G+ D+ +Y+ L+ C+ G A +++ ++ LE +K DV+T++
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI-LEN---IKPDVYTFNI 300
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V F + V + M+ G+ PN +T++SL++ V +A +F M Q G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ Q +I++ + +FD A LF+ K + Y D +S
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH-RKNIIPDVVTYSSLIDGLSK-----SG 414
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
I+ V H D+ P TYN ++ A C + + AL+ + + G P
Sbjct: 415 RISYALQLVDQMH----DR--GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ILI SG +E A ++ + + G + DV AYT I+ +A +L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN--DTYLKELIE 664
+M+ P+ TY ++ + + ++ L ++M G N D YL L +
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLL---REMIARGLPLNFYDLYLTRLAQ 585
Query: 665 EW 666
W
Sbjct: 586 TW 587
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 55/361 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ +I I G + ++ + +N+ ++Y FN L+N D +K
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G+ + +YN L+ CL A+ I+ + A+G + D+ +YS ++
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM----AQGGVNPDIQSYSIMI 372
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K + A+ + ++M + P+ +T+SSLI+ + +G + A+ L ++M G
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L A + Q D+A L + KDK
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKF-------------------------KDK--- 464
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
F+P +TY+IL+K C + + ++ G + +
Sbjct: 465 -------------------GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++TI+I G AL +L M ++G PD Y I + A L E
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
Query: 609 M 609
M
Sbjct: 566 M 566
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ F K + A+ + + P++ ++ID G + + + + + V
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +NS+++ H + + + + G D+++Y+IL+K C +G A++
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + L KG LDV+ Y+ +++ F + AL + M G P+ T+ +I
Sbjct: 492 VFED---LLVKGY-NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + A L EM+ G N
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y+ V L +M G+ PN ++ ILI+ G + A + + + G PD + +TT
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
K +++QAF +++ + ++Y TL+ + G E + L + Q +
Sbjct: 161 LSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG---ETRAALDLLQRVD 217
Query: 649 KAGYKANDTYLKELIEEWCE 668
+ N +I+ C+
Sbjct: 218 GNLVQPNVVMYNTIIDSMCK 237
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 20/368 (5%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ AI+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A ++ E+K + K+ Y+ +V +F AL + E+M
Sbjct: 237 ISAFCKLGRRDSAIQLLNEMKDNGMQPTTKI----YTMLVALFFKLNDVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H F EM + GC P++ N ++ +A + D
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A +LF+ T + NT + E K + S P++ K
Sbjct: 353 DAMKLFQEMG---TLRCIPSVVTYNTIIKALFESKSRAS--EVPSWFERM------KESG 401
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P++ TY+IL+ C KA+M EM G P ++ LIDA G + + A
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + ++E+ S Y IK ++ RL A ++F+EM P++ Y L+
Sbjct: 462 ELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 629 SRYGSLHE 636
+R G L E
Sbjct: 522 ARTGMLDE 529
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
+PT YN I+M Y +V L NEM T G P+ ++++ LI A G + A+
Sbjct: 191 QPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAI 250
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
Q+L M+++GM P YT + + + + A SLFEEM+H +P++ TY L+R
Sbjct: 251 QLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGL 310
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G + E + +M + G + + + +I
Sbjct: 311 GKAGRIDEAYH---FFYEMQREGCRPDTIVMNNMI 342
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 20/312 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D TY ++ + + K+ ++M+ VTP + S ++ NA +V +A+
Sbjct: 122 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTEL--SEVVRMLGNAKMVSKAI 179
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+++ L+ + Y
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISA 239
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALM 536
+ +D S N + ++ +PTT Y +L+ D + +L
Sbjct: 240 FCKLGRRD--SAIQLLNEMKDN---------GMQPTTKIYTMLVALFFKLNDVHGALSLF 288
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR P+ ++T LI G +G ++ A M+ +G PD + I ++
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
RL A LF+EM + P++VTY T+++A + S + + ++ M ++G +
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKA--LFESKSRASEVPSWFERMKESGISPSS 406
Query: 657 TYLKELIEEWCE 668
LI+ +C+
Sbjct: 407 FTYSILIDGFCK 418
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---- 277
I+ N + GK L A++ + P++ TII KSRA
Sbjct: 336 IVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFES----KSRASEVP 391
Query: 278 -IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+E ++ ++ + + ++ L++ + ++ + + + M + G A+Y L+ A
Sbjct: 392 SWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 451
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A LA E++ E+K E G V Y+ ++K A A+ + ++M G
Sbjct: 452 GKAKRYDLACELFQELK--ENCGSSSSRV--YAVMIKHLGKAGRLDDAINMFDEMNKLGC 507
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +++L++ A G++++A+ M + GC P+ NI+L
Sbjct: 508 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 203/475 (42%), Gaps = 113/475 (23%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ R+I + + NV NI N L+ + DL+ L + K K G+ + +Y LL
Sbjct: 154 RVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRLVK---KWGLKMNSFTYKCLL 210
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV----------KVFADAKW--- 378
+A + ++ A ++Y E++ +G KLD+F Y+ ++ +VF D K
Sbjct: 211 QAYLRSRDSSKAFDVYCEIR----RGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC 266
Query: 379 -------------------WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ A+ + +M++ G+T N + +++L+ A +V++A+
Sbjct: 267 RRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDR---------------------------- 451
+F M++ GC PN +++L V Q R
Sbjct: 327 VFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 452 ----AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFV 497
A RLF W+ + +++ E G I +E +K +T+T +
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY- 445
Query: 498 PNSHYSSFD---------------KRFSFKPTTTTYNILMKACCTDYYRVKA------LM 536
N+ +S+ K+ P TYNIL+ + + RV +
Sbjct: 446 -NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISS----FGRVGEVDEAINIF 500
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
E+ P+ IS+ LI+ G +G+V+ A K M+E G++PDVV Y+T ++ ++
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R++ A+SLFEEM QPN+VTY LL + G E + +Y M + G
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAE---AVDLYTKMKQQG 612
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 180/457 (39%), Gaps = 67/457 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG DL LR KK N + + ++ D K+ +Y ++R L+
Sbjct: 181 FGDTEDLQMCLRLV---KKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLD 237
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+ +N L++ A D K +V+++M+K D SY I+++ G E G
Sbjct: 238 IFAYNMLLDALAKDEK-ACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGK---YDEAVGLF 293
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS-------- 402
+ +G L L+V Y+T+++V A K A++V M+ G PN T+S
Sbjct: 294 NEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVA 352
Query: 403 ------------------------SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
L+ + G V +A LF +M +
Sbjct: 353 EGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNMEHKDKQSITN 492
+L++ A + A + S K V Y+ G +IS++ ++ +
Sbjct: 413 MLESLCGAGKTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 493 TPN---FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCT--DYYRV 532
P+ F N SSF + R KP +YN L+ D
Sbjct: 472 GPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
EM+ GL+P+ ++++ L++ G + VE A + + M G P++V Y +
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+S R +A L+ +MK + P+ +TY L R +S
Sbjct: 592 LEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLERLQS 628
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M V + SY +L++ C AG T+ A E+ ++ KGV+ D Y+T+
Sbjct: 394 LFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE---KGVVT-DTMMYNTVF 449
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + E M G +P+ T++ LI++ G V++A+++FEE+ ++ C+
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCK 509
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYDGNTDRISNMEH 484
P+ N L+ + D A F+ T L E + G T+R+
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF-GKTERVE---- 564
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKA---LMNEM 539
YS F++ +P TYNIL+ C R L +M
Sbjct: 565 ---------------MAYSLFEEMLVKGCQPNIVTYNILLD-CLEKSGRTAEAVDLYTKM 608
Query: 540 RTVGLSPNHISWTILIDACGGS 561
+ GL+P+ I++T+L GS
Sbjct: 609 KQQGLTPDSITYTVLERLQSGS 630
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 162/404 (40%), Gaps = 69/404 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++R V N+Y +N L+ + + ++ M + G D S+ ++ C
Sbjct: 144 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 203
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGV 394
G A+ E ++A +Y+ +V + + W++ V +M+ G+
Sbjct: 204 KLGRVEEARGFLAETVPVQA---------SYNAVVHALCGEFRMWEV-FSVVNEMVQRGL 253
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++++++A A + A + M+ GC PN L++ E + A
Sbjct: 254 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALS 313
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ W + + + P+
Sbjct: 314 MWH-WMVDE----------------------------------------------GWAPS 326
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +YN+L++ C D N M+ L PN +++ L+D +G+++GA+ I
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G P+VV YT I V + QA SL ++M PN VT+ TL+ R
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI---GRLC 443
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
V + L V+ M + G ND EL+ G+ ++ N
Sbjct: 444 DCGRVGRALNVFHGMRRNGCHPNDRTYNELL----HGLFREGNH 483
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 32/384 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ TI+D + + AI + S T N+ F +L+ D K L +
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 314
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G SYN+L++ C G+ A + + +K + L + TYST+V
Sbjct: 315 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK----RNALLPNATTYSTLVD 370
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++A A+ + +M S+G PN + ++++I+ + +QA L ++ML C P
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 430
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSI 490
N+ N L+ + + RA +F + DR N + H
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH---------PNDRTYNELLHGL---- 477
Query: 491 TNTPNFVPNSHYSSFDKRF-----SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F +H +F F+ + TYN ++ C R A L+ M G
Sbjct: 478 -----FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 532
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ +I A G V A +L M +VVAYT I +L A
Sbjct: 533 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 592
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
+M + I PN T+ L+RA
Sbjct: 593 VYLLKMLYEGICPNEATWNVLVRA 616
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 22/297 (7%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V ++M AGV PN T++ LI A V+ A + +EM + GC P+ ++
Sbjct: 142 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 201
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + + A R F + T V + Y+ + E + + + V
Sbjct: 202 MCKLGRVEEA-RGFLAET-----VPVQASYNAVVHALCG-EFRMWEVFSVVNEMV----- 249
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+ +P TY ++ A C + A++ M ++G +PN +++T L+
Sbjct: 250 -----QRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFE 304
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V AL + M ++G +P ++Y I+ LK A F MK + PN T
Sbjct: 305 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 364
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
Y TL+ S G L + ++ +M +G K N +I+ C+ ++ D+ ++
Sbjct: 365 YSTLVDGFSNAGDL---DGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 418
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
++P A + V F DL A+ ++ K PN+ + +IDV +C M
Sbjct: 358 LLPNATT-YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV--LCKKMMFD 414
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++ + + N N FN+L+ + + L V+ M++ G + +YN LL
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN ++ + V + G +L + TY+T++ + A+ + M+
Sbjct: 475 HGLFREGNH---KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 530
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ P+ T++++I+A G V A L +M C N IL+
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 579
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 36/194 (18%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN L+ A + V + + MR G+ PN ++ +LI A + V+ A ++
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---------------------------- 602
L M G PD V++ T + + R+++A
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 239
Query: 603 --FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
FS+ EM +QPN+VTY T++ A + E++ A+ M G N
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDA---FCKARELRMACAILARMVSMGCTPNVLTFT 296
Query: 661 ELIEEWCE-GVIQD 673
L++ + E G + D
Sbjct: 297 ALVKGFFEDGKVHD 310
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A + M PN++ Y ++ + G E + +++ ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 175/446 (39%), Gaps = 59/446 (13%)
Query: 263 IDVCGICG-------DYMK-SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
I + GICG D ++ + Y ++ +V LN ++L KF +
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G + D ++Y+ ++ C A A ++ E+K + V+ DVFTY+ ++
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK---SNHVVP-DVFTYTILIDS 524
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F Q A K ++M+ G PN +T+++LI+A A + A LFE ML GC PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 433 SQCCNILLQACVEACQFDRA-------------------FRLFRSWTLSKTQVALGEDYD 473
L+ ++ Q ++A F++ G D
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------SFKP 513
G E +D + + PN Y + F + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ D AL ++ M +PN I +T +ID G + A +++
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+M E G P+VV YT I ++ ++ + L +M PN VTY L+
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824
Query: 632 GSLHEVQQCL-AVYQDMWK---AGYK 653
G L + Q L + Q W AGY+
Sbjct: 825 GLLDDAHQLLDEMKQTYWPKHMAGYR 850
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 83/391 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTDYYRVKAL---------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
C + ++ +L EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGN-EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM 472
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L
Sbjct: 473 SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLL- 531
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
QQ + +M + G N LI +
Sbjct: 532 --QQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 175/439 (39%), Gaps = 38/439 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R + SA ++ PN+ +ID G K+ IY
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 282 LRSQ----NVTL------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+R +V + NI+ + +L++ AH +K ++ M G +
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQ ++ + + +G +V+TYS+++ K +AL
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML PN I ++ +I+ G ++A L M + GC PN ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+A + D+ L R A G + T R+ + H + ++H
Sbjct: 787 GKAGKVDKCLELMRQMG------AKGCAPNFVTYRVL-INH------CCAAGLLDDAHQL 833
Query: 504 SFDKRFSFKPT-TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + ++ P Y +++ ++ L++E+ P ++ ILID+ +G
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Query: 563 NVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL++ K M + D Y++ I+ + ++ +AF L+ +M P L
Sbjct: 894 RLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSI 953
Query: 621 YITLLRARSRYGSLHEVQQ 639
+ L++ R E Q
Sbjct: 954 FFYLVKGLIRINRWEEALQ 972
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 221/503 (43%), Gaps = 60/503 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 127
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 128 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 179
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 180 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 235
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 236 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 486 DKQSIT---NTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG 474
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ ++
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE---IFD 531
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
M G + + LI+ +C+
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCK 554
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 180/408 (44%), Gaps = 26/408 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 374
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQS 489
P N LL+ FD A +++ + K VA E Y D + ME+ + S
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWH--LMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + R F + T+N ++ C V+A + ++M+ +G SP+
Sbjct: 493 ----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
EM + PN+VTY L+ + G L + + Y +M + G AN
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENGLSAN 646
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 185/436 (42%), Gaps = 31/436 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++ +
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME----RE 571
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 572 XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYD 473
+ EM + G N C+ ++ + D A L + + L D
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691
Query: 474 -GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--------RF-------SFKPTTTT 517
+I++ + ++ N V N + K RF F P T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ + + L +EM GL PN +++ LI+ S NV+ A ++ +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV Y T I + + AF L ++M I P++VTY L+ ++G
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG--- 868
Query: 636 EVQQCLAVYQDMWKAG 651
++++ + + M KAG
Sbjct: 869 DIERSMKLLNQMIKAG 884
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 145/363 (39%), Gaps = 30/363 (8%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K++ G ++N ++ C G V A+EI+ ++K L D TY T++
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP----DGITYRTLI 549
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A KVK M ++P+ ++SLI+ + + + L EM G
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKD- 486
PN L+ + D+AF + T LS + G R+ ++ +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG-LYRLGRIDEANL 668
Query: 487 -KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
Q + + F + + D R++ ++ ++E L
Sbjct: 669 LMQKMVDHGFFPDHECFLKSDIRYA-----------------AIQKIADSLDESCKTFLL 711
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+I + I I +G V+ A + ++ G PD Y T I + + +AF L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+EM + PN+VTY L+ + ++ Q+ ++ + + G N LI+
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR---LFHKLHQKGLFPNVVTYNTLIDG 828
Query: 666 WCE 668
+C+
Sbjct: 829 YCK 831
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 189 KELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
K +D F C K D IRYA I AD L D S
Sbjct: 672 KMVDHGFFPDHECFLKSD----IRYAAIQKIADSL---------------------DESC 706
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K PN + I + G+C G +R + L + + + + +L++ A +
Sbjct: 707 KTFLLPNNIVYN--IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + M + G++ ++ +YN L+ C + N AQ ++ L KG+ +V
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF---HKLHQKGLFP-NVV 820
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A K+K+ M+ G++P+ +T+S+LIN G +E++M L +M
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Query: 425 LQAGCE 430
++AG +
Sbjct: 881 IKAGVD 886
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 38/374 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ K M G ++ +YN L+ C A T A E+ ++ L + G + DV TY+
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL---LETLVSSGFVP-DVVTYTI 190
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IV ALK+ E ML G TP+ IT+++L+ G V++A H+F+EM+
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDY--DGNTDRISNME 483
C ++ L+ ++ + A ++ R AL + Y +G D I N+
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNV- 309
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
+D PN TYNI+M C +A + M +
Sbjct: 310 FEDMACRGCVPNI-------------------KTYNIVMDGLCKHGKVDEAFPFLESMHS 350
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ +S+ I+ID + + A Q+L M + G+ PD V Y T + + +R
Sbjct: 351 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG--YKANDTYL 659
A + + M + P+ VTY TL+ S+ L + + + +M + G A TY
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE---LMHEMLRNGCVVSACTTY- 466
Query: 660 KELIEEWC-EGVIQ 672
+I+ C EG ++
Sbjct: 467 NTIIDRLCKEGCLK 480
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 181/417 (43%), Gaps = 30/417 (7%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P+ +I+D G+C G + ++ ++ + +N + +N+L++ ++
Sbjct: 42 TPDTVTFNSIMD--GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ G + D+ +Y+IL C G E + VK + G ++ TY+T
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRI---DEAFELVKEMSGNGCTP-NLVTYNT 155
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + A ++ E ++S+G P+ +T++ +++ G +++A+ + E ML+ G
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L++ + D A +F+ +SK A Y +S + K
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEM-VSKDCTADALAY------VSLVNGYCKS 268
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
S T V + + P YN LM C + + + +M G P
Sbjct: 269 SRTKEAQKVVDGIRGT--------PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 320
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++ I++D G V+ A L+ M G PDVV+Y I ++ + K+A +
Sbjct: 321 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++M I P+ VTY TL+ +++ + + ++M KAG ++ LI
Sbjct: 381 DQMIQAGIPPDAVTYNTLM---AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 124/311 (39%), Gaps = 56/311 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVFTY+ ++ A A ++ +M+ GVTP+T+T++S+++ AG E+A L
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 422 EEMLQAGCEPNSQCC--NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
M + C P+ CC N L+ + DRA L + S
Sbjct: 69 AVMAERNCRPS--CCTYNTLISGLCKQQNVDRAKTLVDEFVSS----------------- 109
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
F P TY+IL C +A L+
Sbjct: 110 ------------------------------GFVPDVVTYSILADGLCKRGRIDEAFELVK 139
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G +PN +++ LID + E A ++L+ + G PDVV YT + +
Sbjct: 140 EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEG 199
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
RL +A + E M P+++TY L+ R G + E ++++M A+
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH---IFKEMVSKDCTADAL 256
Query: 658 YLKELIEEWCE 668
L+ +C+
Sbjct: 257 AYVSLVNGYCK 267
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 171/398 (42%), Gaps = 42/398 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
++ED+ + NI +N +M+ K ++M G + D+ SYNI++
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A+++ ++ + + D TY+T++ F + + A+ + ++M+ AGV
Sbjct: 369 KASKPKEARQVLDQM----IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC---NILLQACVEACQFDRA 452
P+ +T+++LI+ + + A L EML+ GC S C I+ + C E C +A
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV-SACTTYNTIIDRLCKEGC-LKQA 482
Query: 453 FRLFRSWTLSKTQVALGEDYDGNT-------DRISNMEHKDKQSITNTPNFVPNSHYSSF 505
L T G + NT DR+ D+ S S S
Sbjct: 483 LLLMDHMT--------GHGVEANTVTYNIFIDRLCKEGRLDEAS----------SLLSEM 524
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-GLSPNHISWTILIDACGGSGNV 564
D TT L KA D R L EM V GL ++ +LIDA + +
Sbjct: 525 DTLRDEVSYTTVIIGLCKAEQLD--RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 582
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L++M + G SP V+ Y I + ++ +A+ LF+EM I + V+Y L
Sbjct: 583 DEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ G E Q V ++M + + +D ++L
Sbjct: 643 IYGLCGQGRGKEALQ---VLEEMASSDCEIDDLKCRKL 677
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 61/354 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + V D+ +YNIL+ C A T A E+ E+ +GV D T+++I+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD---RGVTP-DTVTFNSIMDGLC 56
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A ++ A + M P+ T+++LI+ V++A L +E + +G P+
Sbjct: 57 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV 116
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+IL + + D AF L + + GN TP
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMS-------------GN---------------GCTP 148
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
N V TYN L+ C KA L+ + + G P+ +++T
Sbjct: 149 NLV-------------------TYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I++D G ++ AL++++ M + G +P V+ YT ++ R+ R+ +A +F+EM
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL-----AVYQDMWKAGYKANDTYLKE 661
+ + Y++L+ + E Q+ + Y D++ A D Y KE
Sbjct: 250 DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNA---LMDGYCKE 300
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 168/410 (40%), Gaps = 55/410 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ + + ++Y++ ++ DL E+ M+ G ++ YN+L+ C
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E G K L K LK DV TY T+V + +++ L++ ++ML +
Sbjct: 274 KKQKV---WEAVGIKKDLAGKE-LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFS 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ SSL+ G VE+A++L + + + G PN N L+ + + FD A L
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL 389
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKR 508
F DR+ I PN V S D
Sbjct: 390 F--------------------DRMGK--------IGLCPNDVTYSILIDMFCRRGKLDTA 421
Query: 509 FSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF KP+ YN L+ C D ++LM EM L P +++T L+
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + AL++ M G+ P + +TT + R+ ++ A LF EM + ++PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
VTY ++ G++ + + L +M + G + + LI C
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFL---NEMIEKGIVPDTYSYRPLIHGLC 588
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 170/392 (43%), Gaps = 24/392 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+++ +ID ++ ++ +++ + + N ++ L+++ L L
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALS 423
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYST 368
M +G+ + YN L+ C G+ A+ + E+ K LE V TY++
Sbjct: 424 FLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT------VVTYTS 477
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + AL++ +M G+ P+ T+++L++ AGL+ A+ LF EM +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN N++++ E +AF F + + K V Y + +
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFE-FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ FV H + + + Y L+ C + +AL +M G+
Sbjct: 597 KV-----FVDGLH------KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LID + + L +LK M + G+ PD V YT+ I ++ K+AF ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ M + PN VTY ++ + G ++E +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 149/371 (40%), Gaps = 55/371 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ Y R +I + G +++ + L N LN + L++ + K L V
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++M GV D+ Y +L+ + + G +K + +G LK D Y++++
Sbjct: 635 CQDMGLRGVDLDLVCYGVLIDGSLKHKDR---KVFLGLLKEMHDRG-LKPDDVIYTSMID 690
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++ A + + M++ G PN +T++++IN AG V +A L +M P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVP 750
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N QV G D T + +M+ +
Sbjct: 751 N--------------------------------QVTYGCFLDILTKGVGDMKKAVELHNA 778
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+ N T TYN+L++ C +A L+ M G+SP+ I
Sbjct: 779 ILKGLLAN---------------TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCI 823
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T +I +V+ A+++ M E G+ PD VAY T I C + + +A L EM
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 610 KHYQIQPNLVT 620
++PN T
Sbjct: 884 LRQGLKPNTET 894
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 177/443 (39%), Gaps = 33/443 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + K + ALR Y P++Y T++ G + ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ NV N +N ++ ++ E M + G++ D SY L+ CL G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ + H KG +L+ Y+ ++ F + AL V +DM GV + +
Sbjct: 593 ASEAK-VFVDGLH---KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV 648
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ LI+ + + L +EM G +P+ ++ A + F AF + W
Sbjct: 649 CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI---W 705
Query: 460 TLSKTQVALGED--YDGNTDRISNMEHKDKQSI----TNTPNFVPNS-HYSSFDKRFSFK 512
L + + + Y + + ++ I N VPN Y F
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCF------- 758
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+IL K D + L N + GL N ++ +LI G +E A +++
Sbjct: 759 -----LDILTKGV-GDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELIT 811
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M DG+SPD + YTT I R +K+A L+ M I+P+ V Y TL+ G
Sbjct: 812 RMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 633 SLHEVQQCLAVYQDMWKAGYKAN 655
E+ + + +M + G K N
Sbjct: 872 ---EMGKATELRNEMLRQGLKPN 891
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 182/454 (40%), Gaps = 64/454 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+ + + F ++ L +AL P++Y ++I+ G C GD + ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN--GHCKFGDISAAESL 459
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++ ++ + + + SLM + + L +Y M G++ + ++ LL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG A +++ E+ A+ +K + TY+ +++ + + A + +M+ G+ P
Sbjct: 520 AGLIRDAVKLFTEM----AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T ++ LI+ G +A + + + CE N C LL + + A +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 457 RSWTLSKTQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ L + L G DG+ ++HKD++
Sbjct: 636 QDMGLRGVDLDLVCYGVLIDGS------LKHKDRKVFL---------------------- 667
Query: 514 TTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
L+ EM GL P+ + +T +IDA +G+ + A I +
Sbjct: 668 --------------------GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G P+ V YT I ++ + +A L +M+ PN VTY L ++
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK--G 765
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ ++++ + ++ + K G AN LI +C
Sbjct: 766 VGDMKKAVELHNAILK-GLLANTATYNMLIRGFC 798
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+++ + + K D A +D PN +I+ G+C G ++ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN--GLCKAGFVNEAEIL 739
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+R N N + +++ D+K +E++ + K G++A+ A+YN+L++ C
Sbjct: 740 CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ + + GV D TY+T++ + A+++ M G+
Sbjct: 799 RQGRMEEASEL---ITRMIGDGV-SPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIR 854
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
P+ + +++LI+ C AG + +A L EML+ G +PN++
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 121/309 (39%), Gaps = 52/309 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T S ++ + + +A+++ +DM++ G+ P+ ++ +I + + +A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M GC+ N N+L+ C+ + + V + +D G
Sbjct: 251 VQMEATGCDVNIVPYNVLIDG---LCKKQKVWE----------AVGIKKDLAGK------ 291
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
KP TY L+ C ++ +++EM
Sbjct: 292 ----------------------------ELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEM 323
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ SP+ + + L++ G VE AL ++K + E G+SP++ Y I + +
Sbjct: 324 LRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LF+ M + PN VTY L+ R G L L+ +M G K +
Sbjct: 384 DEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL---DTALSFLGEMIDMGLKPSVYPY 440
Query: 660 KELIEEWCE 668
LI C+
Sbjct: 441 NSLINGHCK 449
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 42/420 (10%)
Query: 281 DLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLA 337
++RS + + N ++ ++ + +V+ M + G++ D S+ L+ CC
Sbjct: 139 EMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRD 198
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +E+ + ++ +G LD T + IV+VF ++ ++ ML G PN
Sbjct: 199 GRM---EEVDALLTVMQGQGFC-LDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPN 254
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +++ I+ V+QA ++ EEM+ G +PN L+ + +RAFRLF
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFL 314
Query: 458 SWTLSK---------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSH--Y 502
S T + G +G R + M + TNT + + H
Sbjct: 315 KLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKE 374
Query: 503 SSFD---------KRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNH 548
SF+ +R F+P TYN L+ C + Y+V + N GL +
Sbjct: 375 GSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQ---GLQLDK 431
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T++I G++ AL + M E+G PD+ YTT I + ++++++ LF++
Sbjct: 432 VTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDK 491
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ P TY +++ + G + L V++ M + G +A+ LI C+
Sbjct: 492 CLAIELVPTKQTYTSMIAGYCKVG---KSTSALRVFERMVQNGCQADSITYGALISGLCK 548
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 142/355 (40%), Gaps = 58/355 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ M ++G ++ +Y + C ++ + ++ + AKG LK +V+T++++
Sbjct: 241 ELFRRMLEMGTPPNVVNYTAWIDGLC---KRAYVKQAFYVLEEMVAKG-LKPNVYTHTSL 296
Query: 370 VKVFADAKWWQMALKV-------------------------KED-----------MLSAG 393
+ W + A ++ KE M+ G
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 356
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PNT T+++LI+ G A L +M + G +PN N L+ + + A+
Sbjct: 357 LAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAY 416
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSF 511
++ R ++ Q G D T + EH + IT + F++
Sbjct: 417 KVLR---MANNQ---GLQLDKVTYTVMITEHCKQGHITYALDL--------FNRMAENGC 462
Query: 512 KPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY L+ C + L ++ + L P ++T +I G AL+
Sbjct: 463 HPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALR 522
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ + M ++G D + Y I + RL++A +L+E M ++ P VT +TL
Sbjct: 523 VFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL 577
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN T+I G C G + + + +R + NIY +N+L++ ++
Sbjct: 358 APNTNTYTTLIS--GHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V + G+ D +Y +++ C G+ A +++ + A+ D+ TY+T
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM----AENGCHPDIHTYTT 471
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + + K+ + L+ + P T++S+I G A+ +FE M+Q G
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF 456
C+ +S L+ + + + A L+
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALY 559
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 165/385 (42%), Gaps = 34/385 (8%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG----VLKLDVFTYST 368
+ M ++G ++ +Y LL C+ GNT+LA +++ E+ L G +K ++ Y T
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM--LNGNGGFGVTIKPNLVCYCT 243
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ ++ +M G++P+ + +SS+I+ + G E A LF EM+ G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNT 476
PN N+L+ A +A + + A L + ++ L D
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSS---FDKRFSFK--------PTTTTYNILMKAC 525
D +ME K ++ + N + N + S + + ++ PT TYN L+
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ A L EM+ L+P ++ IL+D + ++ A+++ + P +
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ I ++++++ A LF + H ++PN++TY ++ + G L + +
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD---L 540
Query: 644 YQDMWKAGYKANDTYLKELIEEWCE 668
+ M + G N L+ +C+
Sbjct: 541 FLGMEEKGCAPNLVTFNTLMRGFCQ 565
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 175/423 (41%), Gaps = 62/423 (14%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
PN+ TIID +C D + K + ++ +++ + ++ ++ ++S+++ H ++
Sbjct: 236 PNLVCYCTIID--SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL-------- 361
++ M GV ++ ++N+L+ A C AG K EA +LKL
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAG------------KMEEANHLLKLMIQRGESP 341
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D FTY+T++ F A + M S G+ + ++++ LIN +G + +A L+
Sbjct: 342 DTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLY 401
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM+ P N LL LFR + GE
Sbjct: 402 REMMCKEIMPTVITYNTLLTG------------LFREGKVRDAWNLFGE----------- 438
Query: 482 MEHKDKQSITNTPNFV-----PNSHYSSFDKRF------SFKPTTTTYNILMKACCT--D 528
M+ D + T N + N+H S + F F+P+ +N L+ C
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L N + GL PN I++T++I SG +E A + M E G +P++V + T
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ ++ +++ L +EM P+ T ++ S+ E L +
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Query: 649 KAG 651
+ G
Sbjct: 619 QTG 621
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 174/448 (38%), Gaps = 67/448 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+++ L T I FN+L+ A ++ + +YK M +G+ D + NIL+
Sbjct: 78 SVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCY 137
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C + GE+ + + T++++VK A + M+ G
Sbjct: 138 CNLNKVDFGLAVLGEM----LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAG------CEPNSQC-CNILLQACVEAC 447
PN +T+ +L+N G A+ L EEML +PN C C I+ C +
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D+ LF +E K +
Sbjct: 254 -IDKGKELF-------------------------LEMKGR-------------------- 267
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P Y+ ++ C + K L NEM G+ PN +++ +LIDA +G +E
Sbjct: 268 --GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKME 325
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +LK+M + G SPD Y T I R+ A LF M+ I+ + V+Y L+
Sbjct: 326 EANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLI 385
Query: 626 RARSRYGSLHEVQQCLAVYQDMW-KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLC 684
+ G + E ++ +Y++M K TY L + EG ++D GE+ +
Sbjct: 386 NGYCKSGRMVEAKK---LYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442
Query: 685 RRTNSQRPQSLLLEKVAVHLQKSAAENL 712
T ++LL+ + + S A L
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMEL 470
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 502 YSSFDKRFSFKPTT--TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S F+ +PT +++N L+ A Y+ V +L M +GL+P+ I+ ILI+
Sbjct: 77 FSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINC 136
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
V+ L +L M G SP+ V +T+ +K R+ +A L +M +PN
Sbjct: 137 YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPN 196
Query: 618 LVTYITLLRARSRYGS------LHE 636
+VTY TLL G+ LHE
Sbjct: 197 VVTYGTLLNGLCMTGNTMLAVKLHE 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + T+ID G C G +R ++ + S+ + + +N L+N + +
Sbjct: 340 SPDTFTYNTLID--GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEA 397
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKG 357
++Y+ M +M + +YN LL G A ++GE+K ++ G
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457
Query: 358 VLK-------LDVFTY-------------STIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ K +++F Y + ++ A+ ++A ++ + G+ PN
Sbjct: 458 LCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPN 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
IT++ +I+ +G +E A LF M + GC PN N L++ CQ D
Sbjct: 518 VITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG---FCQND 567
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 186/418 (44%), Gaps = 28/418 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTL 309
P+ ++ G + + A++ + V I +N +++V A K +
Sbjct: 169 GPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 228
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ +M++ GV D +YN L+ C A +++ E+K A G + D T++++
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSL 284
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V+ A+ A++V ++M G P+ +T++SLI++ GL+EQA+ L +EM G
Sbjct: 285 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGI 344
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ A + D A + + + L Y+ ++ + K +
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC-TYNALI-KMHGVRGKFPEM 402
Query: 490 ITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLS 545
+ + FD+ S F P T+N L+ + V + EM+ G
Sbjct: 403 M------------AVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYI 450
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P ++ LI + G + A+QI K M E G+ PDV Y + R R +QA L
Sbjct: 451 PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKL 510
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
F EM+ +P+ +Y +LL A Y + + + A+ D++ + ++ +K L+
Sbjct: 511 FAEMEERDCKPDEYSYSSLLHA---YANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 189/422 (44%), Gaps = 22/422 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + +A+ YD ++ PN+ +I + G+ G + + A++++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
LRS +I +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +IY K + G+ DV TY+ ++ A W+ A K+ +M P+
Sbjct: 468 LFDLAMQIY---KRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++SSL++A ANA +++ L +++ EP++ L+ + A + F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF-- 581
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L + + +L D N + + + + S K + + TY
Sbjct: 582 LELRQKRCSL----DINVLNAMVSIYGKNRMVRKVEKIL------SLMKESAINLSAATY 631
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y +K V + ++A L M +PN TY +++ R G L +
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751
Query: 637 VQ 638
+
Sbjct: 752 AK 753
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 205/466 (43%), Gaps = 40/466 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + Y+++ N+ +N+L+ ++ KF + V
Sbjct: 346 PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV 405
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 406 FDELRSAGFVPDIVTWNTLL---AVFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLIS 461
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + +A+++ + M+ AG+ P+ T++++++A A G EQA LF EM + C+P
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 432 NSQCCNILLQACVEACQFDRAFRLF----------RSWTLSKTQVALGEDYDGNTDRISN 481
+ + LL A A + D+ L +W L KT V + +++N
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-LVKTLVLV-------NSKVNN 573
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
+ +K + KR S + + +V+ +++ M+
Sbjct: 574 LAEAEKAFLELR------------QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKE 621
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
++ + ++ L+ G+ E IL ++ G+ PD +Y T I R ++K+
Sbjct: 622 SAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKE 681
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LF EMK ++P++VTY +++ Y S ++ + + + M G K N+
Sbjct: 682 ASRLFSEMKCSGLKPDVVTYNIFVKS---YVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 662 LIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
++E +C G + D + S++ Q L E +A + Q+
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVLAKYTQR 784
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 58/308 (18%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +GVL +T ++V A A L +L A P+ +++L++A +
Sbjct: 130 RELHGEGVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAGAYTALVSAFSR 184
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG A+ +F M+ +G +P N++L SK V E
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------VYSKMAVPWKE 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
+ +++M K P TYN L+ +CC
Sbjct: 227 ----VVELVASM------------------------KEHGVAPDRYTYNTLI-SCCRRRA 257
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y + +EM+ G P+ +++ L+D G + + A+++++ M G P VV Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V+ L+QA +L +EM+ I+P++VTY TL+ R G ++ + Y +M
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAG---KIDAAIVEYDEM 374
Query: 648 WKAGYKAN 655
+ G K N
Sbjct: 375 VRNGCKPN 382
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 175/425 (41%), Gaps = 41/425 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 209
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 265
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 266 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNM-EHKDKQSITNTP 494
D+A + + K + L + Y NT R + M E K+ I
Sbjct: 326 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
PN +Y L+ C D + L EM G P+ +++
Sbjct: 383 GVRPNH---------------VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++D G++ A + K M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 428 VMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
+PNLV Y L+ ++ G E Q +Y +M G +D L+ +
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDGLTPDDALYSALVGS----LHT 540
Query: 673 DKNQN 677
DK QN
Sbjct: 541 DKKQN 545
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 161/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 326
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 417
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K EM GL P
Sbjct: 418 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---KEMEKKGLVP 456
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 517 DNMLGDGLTPDDALYSALV------GSLH 539
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S ++++D SG V A Q+L M G+ + + Y + + R K + + +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M++ I+P + TY L+ S + ++ + AV+++M + + +I +C
Sbjct: 204 MENEGIEPTVGTYTILVDGLS---AARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 259
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 179/418 (42%), Gaps = 44/418 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-- 307
+P++ T+I+ G C RA + E + + ++ + S+++ D K
Sbjct: 74 APDLVTYSTVIN--GFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ + M+ GV D +++ L+ C A A ++Y K + K DV TY+
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY---KEILTSSSWKPDVVTYT 188
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ F + + A+K+ M PN +T+SSL++ AG ++QA+ LF M
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 248
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDG--NTDRISNM 482
GC PN L+ A + D A L T + V+ DG RI
Sbjct: 249 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEA 308
Query: 483 EHKDKQSITNT--PNFVPNS-------HYSSFDK-RF---------SFKPTTTTYNILMK 523
+ K+ T + P+ + + + S ++ RF P TY+I++
Sbjct: 309 KQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 368
Query: 524 ACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y R K + EM ++PN ++++ LID +G V+ A+++LK M
Sbjct: 369 G----YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ P V + + I R + +A+ L M + ++P +VTY TLL SR G +
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 177/397 (44%), Gaps = 37/397 (9%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A+ LK L ++ M++ V + +YN+++ C A T A E+ E++ + K V
Sbjct: 20 ANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMR--DGKSVAP- 75
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHL 420
D+ TYST++ F A ++ +M++ G+ P+ +T++S+++ G +++A +
Sbjct: 76 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------SW---TLSKTQVALGED 471
EM G EP+ + L+ A + D A +L++ SW ++ T + G
Sbjct: 136 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFC 195
Query: 472 YDGNTDRISNM--EHKDKQSITNTPNFVPNSHY--------SSFD--KRFSFK---PTTT 516
GN ++ M + ++ + N + H + D +R + K P
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+ C ++V A LM+EM P+ +S+ L+D G +E A Q+ K
Sbjct: 256 TYTTLIHGLCA-AHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYG 632
M PD + YT ++ + RL++A L E MK I P++VTY ++ SR
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
E + + Q+M N LI+ C+
Sbjct: 375 RFVEAAEFI---QEMIARNVAPNAVTYSSLIDGLCKA 408
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 29/305 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T++ I+ F A + AL E M V PN T++ ++N A L +A + +
Sbjct: 7 VVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLK 65
Query: 423 EMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSW---------TLSKTQVALGEDY 472
EM P+ + ++ + + DRA + R ++ T V G
Sbjct: 66 EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTT 516
DG DR M + K F ++ Y S+KP
Sbjct: 126 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV 185
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ C KA ++ M PN ++++ L+ +G+++ AL + + M
Sbjct: 186 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 245
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G P+VV YTT I + ++ A L +EM P+ V+Y LL R G +
Sbjct: 246 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305
Query: 635 HEVQQ 639
E +Q
Sbjct: 306 EEAKQ 310
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 110/239 (46%), Gaps = 9/239 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
+ + + + K DL AL + PN+ T+I G+C + +R +
Sbjct: 220 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH--GLCAAHKVDAARLLM 277
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +N+L++ ++ +++K M + D +Y L++ C
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFC-- 335
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N +E +++++ + DV TYS +V ++ AK + A + ++M++ V PN
Sbjct: 336 -NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+SSLI+ AG V+ AM + + M+ EP+ N ++ A D A++L
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P ++WTI+ID + ++ AL + MRE ++P+ Y + +++ +A+ +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCL 641
+EM+ + + P+LVTY T++ + G + + L
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEIL 100
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 57/429 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ ++ + +D+ + ++N+ V SLM +L+ L + + +
Sbjct: 233 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 292
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ + +Y++L+ CC GN A E Y E+K KG+ + V++ ++I++ + +
Sbjct: 293 GLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK---TKGI-RSSVYSLNSILEGYLKCQS 348
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCN 437
WQ A + D L +G+ N T+++L++ G + +A +L++E++ G PN N
Sbjct: 349 WQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 407
Query: 438 ILLQACVE-----ACQFDRAF--RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
I+L C + AC+ + F ++ T + G G+ + ++ H+ K +
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA- 466
Query: 491 TNTPNFVPNSHY------------SSFDKRF--------SFKPTTTTYNILMKA------ 524
N +P SF+ R F PT YN ++
Sbjct: 467 ----NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 525 --CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++ YR EM VG++P+ +++T LID N++ AL++L M+ G+ D
Sbjct: 523 INLASNVYR------EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 576
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AY T I + + +K A L E++ + PN Y +++ + +++ V++ +
Sbjct: 577 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG---FKNMNNVEEAID 633
Query: 643 VYQDMWKAG 651
+Y+ M G
Sbjct: 634 LYKKMVNEG 642
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 204/488 (41%), Gaps = 59/488 (12%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFC----------NFVREFGKKRDLVSALRAYDA 246
++ CV + +V A+R + D++ C + ++ + + +L SAL +
Sbjct: 234 VITACVKEGNVAEALRL-----KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+ PN +ID C G+ K+ Y +++++ + ++Y NS++ +
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++ + + G +A++ ++N LL C G A ++ EV AKG+ +V
Sbjct: 349 WQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGI-SPNVV 403
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ I+ A KV ++ML G TPN +T++ L++ G +E A +F M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWT--------LSKTQVALGEDYD 473
A P I+++ C+ R+F LF + + + G +
Sbjct: 464 KDANILPTDTTLGIIIKG---LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 520
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD------------------KRFSFKPTT 515
GN + SN+ +++ + TP+ V ++ S D KR K
Sbjct: 521 GNINLASNV-YREMCEVGITPSTV--TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 577
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C D L+NE+R GLSPN + +I NVE A+ + K
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G+ D+ YT+ I ++S RL A + EM I P+ + L+ G
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697
Query: 634 LHEVQQCL 641
++ L
Sbjct: 698 FENARKIL 705
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 22/356 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ T N F LM+ D++ ++ M+ ++ + I++K C
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + ++++ + ++G + Y+TI+ F +A V +M G+T
Sbjct: 484 KAGRSFEGRDLFNK---FVSQGFVPT-CMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 539
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++SLI+ ++ A+ L +M + G + + + L+ + A L
Sbjct: 540 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 599
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R LS + G + ++N+E +P K
Sbjct: 600 LNELRGAGLSPNRFIYNSMITGFKN-MNNVEEAIDLYKKMVNEGIP----------CDLK 648
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ + L+K+ Y + EM + G+ P+ + T+LI+ G E A +IL+
Sbjct: 649 TYTSLIDGLLKSGRLLY--ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
M M P V+ Y T I + L++AF L +EM + P+ +TY L+ +
Sbjct: 707 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGK 762
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 160/386 (41%), Gaps = 53/386 (13%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV D +Y+I + CL N+ A + ++ + A G + + T+++++
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSL---LREMRAAGWIPPEG-TFTSVITACVKEGN 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL++K+DM++ G + N +SL+ G + A+ L E+ ++G PN ++
Sbjct: 244 VAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFV 497
L+ C + ++AF + KT+ Y N S +E K QS N
Sbjct: 304 LIDGCCKNGNIEKAFEFYSEM---KTKGIRSSVYSLN----SILEGYLKCQSWQNAFTMF 356
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
++ S F T+N L+ C + +A L +E+ G+SPN +S+ +I
Sbjct: 357 NDALESGLANVF-------TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
N+ A ++ K M ++G +P+ V +T + + ++ AFS+F MK I
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 469
Query: 616 PNLVTYITLLRARSRYGSLHE-------------VQQCLA-------------------V 643
P T +++ + G E V C+ V
Sbjct: 470 PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNV 529
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEG 669
Y++M + G + LI+ +C+G
Sbjct: 530 YREMCEVGITPSTVTYTSLIDGFCKG 555
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 197 IVQLCVNKPDVNLA---IRYAC---IVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
I+ + + ++NLA R C I P + + + + + F K ++ AL+ + K+
Sbjct: 513 IIDGFIKEGNINLASNVYREMCEVGITP-STVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571
Query: 251 LSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
++ T+ID G C D + + +LR ++ N +++NS++ N ++++
Sbjct: 572 GLKMDIKAYGTLID--GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+++YK M G+ D+ +Y L+ +G + A +I+ E + +KG+L D +
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE---MLSKGILP-DDRAH 685
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ + ++ A K+ EDM + P+ + +++LI G +++A L +EML
Sbjct: 686 TVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 745
Query: 427 AGCEPNSQCCNILLQA 442
G P++ +IL+
Sbjct: 746 RGLVPDNITYDILVNG 761
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 175/406 (43%), Gaps = 33/406 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R I +L + N+ +N + L + F V+ + K+G + D ++ L+K
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGL-------IPFAFSVFAKILKMGYVPDTITFTTLIK 163
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL G A + +V L D +Y T++ + AL + + +
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALG----FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGN 219
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V PN + ++++I++ LV +A LF EM+ G P+ + L+ + + A
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFS 510
LF L + + Y N + N KD + + FD +
Sbjct: 280 IDLFNKMILENIKPDV---YTFNI--LVNAFCKDGKM---------KEGKTVFDMMMKQG 325
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP TYN LM C + + K++ N M G++P+ S++I+I+ + A+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M + PDVV Y++ I +S R+ A L ++M + P + TY ++L A
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ +H+V + +A+ + G + N LI+ C+ G ++D
Sbjct: 446 CK---IHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLED 488
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 18/315 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M G+ D+ +Y+ L+ C+ G A +++ ++ LE +K DV+T++
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI-LEN---IKPDVYTFNI 300
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V F + V + M+ G+ PN +T++SL++ V +A +F M Q G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ Q +I++ + +FD A LF+ K + Y D +S
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH-RKNIIPDVVTYSSLIDGLSK-----SG 414
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
I+ V H D+ PT TYN ++ A C + + AL+ +++ G+ P
Sbjct: 415 RISYALQLVDQMH----DR--GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ILI SG +E A ++ + + G + +V YT I+ +A +L
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528
Query: 607 EEMKHYQIQPNLVTY 621
+M+ P+ TY
Sbjct: 529 SKMEDNGCIPDAKTY 543
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 58/382 (15%)
Query: 242 RAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+D + +S SP++ +I I G + ++ + +N+ ++Y FN L+
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N D +K V+ M K G+ + +YN L+ CL A+ I+ + A+
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM----AQ 358
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D+ +YS ++ F K + A+ + ++M + P+ +T+SSLI+ + +G +
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L ++M G P + N +L A + Q D+A L L+K
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL-----LTKL------------ 461
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
KDK +P TY+IL+K C +
Sbjct: 462 --------KDK----------------------GIQPNMYTYSILIKGLCQSGKLEDARK 491
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ + G + N ++TI+I G AL +L M ++G PD Y I
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551
Query: 595 RSKRLKQAFSLFEEMKHYQIQP 616
+ A L EM ++P
Sbjct: 552 KKDENDMAEKLLREMIARGVRP 573
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 152/358 (42%), Gaps = 59/358 (16%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ YN ++ + C L E + + +KG+ DV TYS ++ F
Sbjct: 221 VQPNVVMYNTIIDSMC---KVKLVNEAFDLFSEMISKGI-SPDVVTYSALISGFCILGKL 276
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A+ + M+ + P+ T++ L+NA G +++ +F+ M++ G +PN N L
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + ++A +F T+++ V
Sbjct: 337 MDGYCLVKEVNKAKSIFN--TMAQGGV--------------------------------- 361
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P +Y+I++ C + L EM + P+ ++++ LID
Sbjct: 362 ------------NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG + ALQ++ M + G+ P + Y + + + ++ +A +L ++K IQPN
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWC-EGVIQD 673
+ TY L++ + G L + ++ V++ + G+ N DTY +I+ +C EG+ +
Sbjct: 470 MYTYSILIKGLCQSGKLEDARK---VFEGLLVKGHNLNVDTY-TIMIQGFCVEGLFNE 523
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 115/311 (36%), Gaps = 52/311 (16%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K++ +YS+ F A+ + +L TP ++ ++ + + ++
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M G +PN CNIL+ + AF +F
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL------------------- 147
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--N 537
+ + P T T+ L+K C +A + +
Sbjct: 148 ----------------------------KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHD 179
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
++ +G + IS+ LI G AL +L+ + + + P+VV Y T I + K
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ +AF LF EM I P++VTY L+ G L++ + ++ M K +
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLND---AIDLFNKMILENIKPDVY 296
Query: 658 YLKELIEEWCE 668
L+ +C+
Sbjct: 297 TFNILVNAFCK 307
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 158/390 (40%), Gaps = 58/390 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDE--------------------------------------AGLKPDV 530
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ E L + +M + G++ + LI
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTASSYNALI 677
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 47/373 (12%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+SK L +A SL +EM I+P +VTY L+ G + ++ L + M +
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL---EWMLEKNIHP 598
Query: 655 NDTYLKELIEEWC 667
N T L++++C
Sbjct: 599 NTTTYNSLMKQYC 611
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Query: 515 TTTYNILMKACCTDYYRVK-----------------------------------ALMNEM 539
T +YNIL+KA CT R+K L++EM
Sbjct: 253 TCSYNILLKALCT-AGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL N +++T +I G V A+++++ M G+ D +TT + R L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A + F+EM+ + + VTY L+ R G L E ++ V Q+M G +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER---VLQEMEDKGLDVDAVTY 428
Query: 660 KELIEEWCE 668
LI+ +C+
Sbjct: 429 TVLIDGYCK 437
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|449458656|ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 191/467 (40%), Gaps = 79/467 (16%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADI-----LFCNFVREFGKKRDLVSALRAYDASKKHL 251
++ +C + D A + +V A + L+ + GK + + +
Sbjct: 491 LMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAG 550
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKF 307
PN++ +ID C K+ +Y +RS+NV + VFN+L+ A D F
Sbjct: 551 VEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAF 610
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ + + D + L+KAC AG A+E+Y + + KG ++ Y+
Sbjct: 611 DVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMIHDYKIKGTPEV----YT 666
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
V + + W A + +DM GV P+ I S+LI+ +AG ++ A + E
Sbjct: 667 IAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKTL 726
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G + L+ AC A + +A L+ ED
Sbjct: 727 GIRVGIVSYSSLMGACSNAKNWQKALALY-------------EDL--------------- 758
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGL 544
K + T +T N L+ A +D +++ M+ EM+ +GL
Sbjct: 759 -------------------KSMKLRLTVSTVNALITAL-SDGEQLQMAMDILTEMKELGL 798
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN+I+++IL A + ++E AL +L +EDG+ P + Y I +C+R R+ S
Sbjct: 799 SPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCIIGMCLR--RIADPSS 856
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +P + TL + S++ Q L VY+++ +AG
Sbjct: 857 L--------DRPLMSLDSTLPQVDSKW-----TAQALKVYREIIEAG 890
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 164/382 (42%), Gaps = 65/382 (17%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
QN TL+ FN LM+V ++ D + +V + +Q+ G+ AD Y L+ C +G
Sbjct: 481 QNPTLS--TFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDA 538
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E++ H ++ +V TY ++ A A A V M S V P+ + ++
Sbjct: 539 MFEVF----HRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFN 594
Query: 403 SLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+LI AC +G V++A + EM EP+ L++AC A Q DRA +++
Sbjct: 595 ALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYK--- 651
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
M H + K T Y I
Sbjct: 652 ---------------------MIHD-----------------------YKIKGTPEVYTI 667
Query: 521 LMKACCT---DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ CC+ D+ + +M G+ P+ I + LID G +G ++ A ++L +
Sbjct: 668 AVN-CCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKTL 726
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ +V+Y++ + C +K ++A +L+E++K +++ + T L+ A S ++
Sbjct: 727 GIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALITALS---DGEQL 783
Query: 638 QQCLAVYQDMWKAGYKAND-TY 658
Q + + +M + G N+ TY
Sbjct: 784 QMAMDILTEMKELGLSPNNITY 805
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + E A Q++++++E GM D YTT I C +S ++ F
Sbjct: 482 NPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFE 541
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+F M + ++PN+ TY L+ +R +V + VY M K + LI
Sbjct: 542 VFHRMVNAGVEPNVHTYGALIDGCARAA---QVAKAFGVYGIMRSKNVKPDRVVFNALI 597
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 28/300 (9%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN ++SL+ A A G +A +++EML+ G P + + A +A
Sbjct: 132 EMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAE 191
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNMEHKDKQ-SITNTP-NFVPN 499
+F+ A R+F+ S Y+ G + S + +Q P V
Sbjct: 192 RFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTF 251
Query: 500 SHYSSFDKRFS-------------FKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVG 543
+ +F K + KP TY L+ A + RV+ + EM G
Sbjct: 252 NSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAY-SKARRVEEAHVVFREMVASG 310
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ I++ L+DA VEGA + K M +D PD+ +YTT + + +K+A
Sbjct: 311 LRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAE 370
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L + MK ++PN+VTY TL++ Y S+H++ L ++D+ KAG K N T L+
Sbjct: 371 RLLKRMKQAGLEPNVVTYGTLMQG---YTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLV 427
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 159/365 (43%), Gaps = 38/365 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDL-----RSQNVTLNIYVFNSLMNVNAHDLKFT 308
PN+ ++++ G+++++ +IY+++ VT +Y+ N+L A
Sbjct: 140 PNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYI-NAL--CKAERFNDA 196
Query: 309 LEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++K + + D YN++L AG Q ++ + ++ GV + V T++
Sbjct: 197 ERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALF---RQMKGAGV-PMTVVTFN 252
Query: 368 TIV---KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ K ADA+ M +A + P+ IT++ LINA + A VE+A +F EM
Sbjct: 253 SLMAFQKTVADAE------ACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREM 306
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G P+ N LL A + + + A LF+S + + D T ++
Sbjct: 307 VASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCR----PDIRSYTTLLA---- 358
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRT 541
+ NT N K+ +P TY LM+ T + + A++ +++
Sbjct: 359 ----AYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGY-TSVHDINAMLQTFEDLQK 413
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ PN +T+L+ G + E AL K M + G D + + C S++ ++
Sbjct: 414 AGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDACQTSEQKQE 473
Query: 602 AFSLF 606
F
Sbjct: 474 VLEYF 478
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 152/398 (38%), Gaps = 60/398 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLG 319
+I G G + + ++R + N+ F SL+ +A F +Y+ M K G
Sbjct: 113 MIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTG 172
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y + + A C A A+ I+ K L+ K D Y+ ++ + A +
Sbjct: 173 PAPTEVTYQVYINALCKAERFNDAERIF---KCLDESAEAKPDARLYNLMLHTYGKAGKF 229
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ M AGV +T++SL+ A V A M A +P+ L
Sbjct: 230 SEQQALFRQMKGAGVPMTVVTFNSLM---AFQKTVADAEACLRHMQAAKIKPDVITYTGL 286
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A +A + + A +FR S
Sbjct: 287 INAYSKARRVEEAHVVFREMVAS------------------------------------- 309
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+P+ YN L+ A C + ++L M P+ S+T L+ A
Sbjct: 310 ----------GLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAA 359
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A ++LK M++ G+ P+VV Y T ++ + FE+++ I+PN
Sbjct: 360 YANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPN 419
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ L+R +G + + L+ ++ M +G A+
Sbjct: 420 STIFTLLVRT---FGQQEDFESALSWFKKMLDSGCPAD 454
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYK 313
+I G+ Y K+R ++ ++ + + + +N+L++ A +++ ++K
Sbjct: 280 VITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFK 339
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M + D+ SY LL A GN A+ + +K ++ G L+ +V TY T+++ +
Sbjct: 340 SMGQDRCRPDIRSYTTLLAAYANTGNMKKAERL---LKRMKQAG-LEPNVVTYGTLMQGY 395
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
L+ ED+ AG+ PN+ ++ L+ E A+ F++ML +GC +
Sbjct: 396 TSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQ 455
Query: 434 QCCNILLQACVEACQFDRAFRLFRS 458
+ L+ AC + Q F S
Sbjct: 456 RSRAALMDACQTSEQKQEVLEYFGS 480
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 184/430 (42%), Gaps = 43/430 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ G G K+ + + ++ N+ +N+++ + L+ +++
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N +L C G ++ E+K + + T++ ++
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG----FEPNRDTFNALIG 498
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ +K+ E+M+ AG TP T+++L+NA A G E A + +M G +P
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Query: 432 NSQCCNILLQACVEACQFDRAF----------RLFRSWTLSKTQVALGEDYDGNTDRISN 481
N +++L C R +F SW L +T V ++N
Sbjct: 559 NETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV------------LAN 605
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + + F K +KP +N ++ + Y R ++ +
Sbjct: 606 FKRRALMGMERA--------FQEFCKH-GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R GL P+ +++ L+D G +ILK +++ G PD+V+Y T IK R +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A EM I+P +VTY T + S G EV++ ++ M + + N+
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISY---MIQHDCRPNELTY 773
Query: 660 KELIEEWCEG 669
K +++ +C+G
Sbjct: 774 KIVVDGYCKG 783
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 220/508 (43%), Gaps = 71/508 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ +K SP + ++DV G G + K + +++RS + + + ++++
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVI 287
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + L + + ++ G +A +YN LL+ AG + E +K +E K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG---IYSEALSILKEME-K 343
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D+ TY+ +V + A + + + M+ G+ PN IT++++INA AG ++
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LG 469
A+ F +M ++GC PN N +L + + + + RS + V L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSFKP 513
+ + N ++ +S PN N+ ++ + + F P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ A D+ ++++ +M++ G PN S++++++ GN G +I
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIE 583
Query: 572 K------------IMR-----------------------EDGMSPDVVAYTTAIKVCVRS 596
+ ++R + G PD+V + + + + ++
Sbjct: 584 EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN 643
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
K +A + ++ +QP+LVTY +L+ +R G + ++ L Q K+G K +
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ---KSGGKPDL 700
Query: 657 TYLKELIEEWC-EGVIQDKNQNQGEVTL 683
+I+ +C +G++Q+ + E+T+
Sbjct: 701 VSYNTVIKGFCRQGLMQEAIRTLSEMTI 728
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 181/448 (40%), Gaps = 61/448 (13%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
VR G++ ALR D S ++ TI+ G Y ++ ++E +R +
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +++V L + M+ G+ D + + ++ AC G A+
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + +K ++G + FTY+++++VF A + AL + ++M P+ +T++ L
Sbjct: 301 KFFARLK---SEGYVA-GTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+ A AG E+ + M++ G PN+ ++ A +A + D+A FR S
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGC 416
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
VPN TYN ++
Sbjct: 417 --------------------------------VPN---------------VCTYNAIL-G 428
Query: 525 CCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R++ +++ +MR+ G +PN ++W ++ CG G + ++ + M+ G P
Sbjct: 429 MLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + I R ++EEM P + TY LL A +R G +
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAE--- 545
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEG 669
+V DM G+K N+T ++ + +G
Sbjct: 546 SVILDMKSKGFKPNETSYSLMLNCYAKG 573
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 156/384 (40%), Gaps = 30/384 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GKK L + + + +PN T++ +CG G + ++ +++S N
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 291 IYVFNSLMNVNAH-----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
FN+L+ D+ +++Y+ M K G + +YN LL A G+ A+
Sbjct: 490 RDTFNALIGAYGRCGSQIDV---VKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + +++KG K + +YS ++ +A + K++E++ + + P+ I +L+
Sbjct: 547 V---ILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV 602
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A + F+E + G +P+ N +L + +DRA + R S Q
Sbjct: 603 LANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQ 662
Query: 466 VALGEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
L Y+ D + K ++ + ++ KP +YN ++K
Sbjct: 663 PDL-VTYNSLMDMYARGGECWKGEEILKGI-------------QKSGGKPDLVSYNTVIK 708
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +A+ ++EM G+ P +++ + G G +++ M + P
Sbjct: 709 GFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRP 768
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSL 605
+ + Y + + K+ K+A
Sbjct: 769 NELTYKIVVDGYCKGKKYKEAMDF 792
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 184/430 (42%), Gaps = 43/430 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ G G K+ + + ++ N+ +N+++ + L+ +++
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N +L C G ++ E+K + + T++ ++
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG----FEPNRDTFNALIG 498
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ +K+ E+M+ AG TP T+++L+NA A G E A + +M G +P
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Query: 432 NSQCCNILLQACVEACQFDRAF----------RLFRSWTLSKTQVALGEDYDGNTDRISN 481
N +++L C R +F SW L +T V ++N
Sbjct: 559 NETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV------------LAN 605
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + + F K +KP +N ++ + Y R ++ +
Sbjct: 606 FKRRALMGMERA--------FQEFCKH-GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R GL P+ +++ L+D G +ILK +++ G PD+V+Y T IK R +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A EM I+P +VTY T + S G EV++ ++ M + + N+
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISY---MIQHDCRPNELTY 773
Query: 660 KELIEEWCEG 669
K +++ +C+G
Sbjct: 774 KIVVDGYCKG 783
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 220/508 (43%), Gaps = 71/508 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ +K SP + ++DV G G + K + +++RS + + + ++++
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVI 287
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + L + + ++ G +A +YN LL+ AG + E +K +E K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG---IYSEALSILKEME-K 343
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D+ TY+ +V + A + + + M+ G+ PN IT++++INA AG ++
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LG 469
A+ F +M ++GC PN N +L + + + + RS + V L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSFKP 513
+ + N ++ +S PN N+ ++ + + F P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ A D+ ++++ +M++ G PN S++++++ GN G +I
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIE 583
Query: 572 K------------IMR-----------------------EDGMSPDVVAYTTAIKVCVRS 596
+ ++R + G PD+V + + + + ++
Sbjct: 584 EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN 643
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
K +A + ++ +QP+LVTY +L+ +R G + ++ L Q K+G K +
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ---KSGGKPDL 700
Query: 657 TYLKELIEEWC-EGVIQDKNQNQGEVTL 683
+I+ +C +G++Q+ + E+T+
Sbjct: 701 VSYNTVIKGFCRQGLMQEAIRTLSEMTI 728
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 182/448 (40%), Gaps = 61/448 (13%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
VR G++ ALR D S ++ TI+ G Y ++ ++E +R +
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +++V L + M+ G+ D + + ++ AC G A+
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + +K ++G + FTY+++++VF A + AL + ++M P+ +T++ L
Sbjct: 301 KFFARLK---SEGYVA-GTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+ A AG E+ + M++ G PN+ ++ A +A + D+A FR
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFR------- 409
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ K+ + P TYN ++
Sbjct: 410 ------------------QMKESGCV----------------------PNVCTYNAIL-G 428
Query: 525 CCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R++ +++ +MR+ G +PN ++W ++ CG G + ++ + M+ G P
Sbjct: 429 MLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + I R ++EEM P + TY LL A +R G +
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAE--- 545
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEG 669
+V DM G+K N+T ++ + +G
Sbjct: 546 SVILDMKSKGFKPNETSYSLMLNCYAKG 573
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 156/384 (40%), Gaps = 30/384 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GKK L + + + +PN T++ +CG G + ++ +++S N
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 291 IYVFNSLMNVNAH-----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
FN+L+ D+ +++Y+ M K G + +YN LL A G+ A+
Sbjct: 490 RDTFNALIGAYGRCGSQIDV---VKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + +++KG K + +YS ++ +A + K++E++ + + P+ I +L+
Sbjct: 547 V---ILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV 602
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A + F+E + G +P+ N +L + +DRA + R S Q
Sbjct: 603 LANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQ 662
Query: 466 VALGEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
L Y+ D + K ++ + ++ KP +YN ++K
Sbjct: 663 PDL-VTYNSLMDMYARGGECWKGEEILKGI-------------QKSGGKPDLVSYNTVIK 708
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +A+ ++EM G+ P +++ + G G +++ M + P
Sbjct: 709 GFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRP 768
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSL 605
+ + Y + + K+ K+A
Sbjct: 769 NELTYKIVVDGYCKGKKYKEAMDF 792
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 25/340 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ ++ G + SY ++++ + N A+ ++ ++ G +KL +++
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEK-KSGGAVKLGDRFFNS 170
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA- 427
+++ + A +Q ++KV + M GV+P+ +T++SL++ G A LF+EML
Sbjct: 171 LIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 230
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNM 482
G P++ NIL++ D F F+ + K V DG ++
Sbjct: 231 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ K + +PN PN TY L++ C D +L+ EM
Sbjct: 291 HNVVKGMVKKSPNLSPN---------------VVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I++ LI + ++ +IL+ M DG PD T IK +L
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++AFS+FE+M ++QP+ TY L+R+ + G ++
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 174/464 (37%), Gaps = 90/464 (19%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
V D F + +R +G +++ + K+ SP++ +++ + G ++
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAK 220
Query: 277 AIYED-LRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKNMQKLGVMADMASYNILL 331
++++ L + VT + Y FN L+ +N+ D F +K M + D+ +YN L+
Sbjct: 221 QLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF--FKEMSRFKCDPDVVTYNTLV 278
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C AG +A + VK + K L +V TY+T+++ + + AL + +M+
Sbjct: 279 DGLCRAGKVKIAHNV---VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 391 SAGVTPNTITWSSLINACANA------------------------------------GLV 414
S G+ PN IT+++LI A G +
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+A +FE+M + +P+S ++L+++ + F RA F L++ ++ L +
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE--LAEKEILLHD---- 449
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
KP YN + + C++ KA
Sbjct: 450 ----------------------------------VGCKPLVAAYNPMFEYLCSNGKTKKA 475
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ G T+++ C G E +L +M PD Y I
Sbjct: 476 ERVFRQLMKRGTQDPPSYKTLILGHC-REGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ A E+M P + ++L A G HE
Sbjct: 535 LLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHE 578
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SLI + AGL ++++ +F+ M + G P+ N LL ++ + A +LF
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD--- 224
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
E D +T P T T+NI
Sbjct: 225 ----------------------EMLDTYGVT---------------------PDTYTFNI 241
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM--RE 576
L++ C + + EM P+ +++ L+D +G V+ A ++K M +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+SP+VV YTT I+ + + +A SL EM ++PN +TY TL++ L +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ L + G+ + L LI+ C
Sbjct: 362 IKEILEGM--VGDGGFIPDTCTLNTLIKAHC 390
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 144/350 (41%), Gaps = 56/350 (16%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K + YK + + G A + +NI++ C G AQ ++ + K L+ V
Sbjct: 117 FKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAI----TKWGLRPSVV 172
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++T++ + ++K M ++GV P+ T+S LIN V++A LF EM
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEM 232
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + D A ++
Sbjct: 233 LDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIY---------------------------- 264
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ F P TYN L+ C D +V+AL++EM
Sbjct: 265 --KQMLSQ-----------------GFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G++E A + K M ++ + D VAYT + + R A
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDA 365
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+F EM ++P+ TY ++ + G + + L ++M + G+
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLL---KEMQRDGH 412
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 33/378 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DI +F + + + + A++ + +KKH CR +++ +
Sbjct: 63 RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
Y+++ ++Y FN +M+ +++ V+ + K G+ + S+N L+
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ +ML G+
Sbjct: 183 RLGD---LDEGFRLKSAMHASGV-QPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G+V+ AM ++++ML G P+ N L+ + + L
Sbjct: 239 PNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRAL 298
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKD---KQSITNTPNFVPNSHYSSFDKRF--- 509
+++ + D+I+ D K+ T F KR
Sbjct: 299 IDEMSMNGLK----------PDKITYTTLIDGCCKEGDLETA--------FEFRKRMIKE 340
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
S + Y L+ C + A + EM +VGL P++ ++T++I+ G+V A
Sbjct: 341 SIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTA 400
Query: 568 LQILKIMREDGMSPDVVA 585
++LK M+ DG P VV
Sbjct: 401 SRLLKEMQRDGHVPCVVT 418
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 39/420 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-------NVNAHDLKFTLEVYKNMQKLGVMA 322
G K+ A+ ++ ++ + + +N+++ NV A +KF M+ +G++
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV-----EMRAMGLLP 370
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN L+ C AGN A ++G++K + L V TY+ ++ + + A
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLK----RAGLAPSVLTYNILLDGYCRLGDLEEA 426
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ K++M+ G P+ T++ L+N + F+EML G +P+ N + A
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ AF+L ++ ++ G D T I + + N Y
Sbjct: 487 ELILGSTSEAFQL------TEVMISRGISSDTVTYNIF------LDGLCKSGNL--KDAY 532
Query: 503 SSFDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ K S +P TY L+ A C + + + M GL P+ +++T+ I A
Sbjct: 533 VLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAY 592
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
GN+ A + M E+G+ P+ V Y I R R A+ F EM + PN
Sbjct: 593 CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNK 652
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
TY L+ + G+ E + +Y +M + G + L + + EG Q K+ Q
Sbjct: 653 YTYTLLIDGNCKEGNWEEA---IRLYSEMHQHGIHPDHCTHNALFKGFDEG--QSKHAIQ 707
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--LQ 426
+++ D W V +ML G+ P+ +T+++L+++ G V+QA L EM
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC P+ N+++ + ++A +L +SK A
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA------------------- 302
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
F+F P T Y + + AL EM G+ P
Sbjct: 303 ----------------------FTFNPLITGY--FARGSVE---KAGALQLEMENEGIVP 335
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ +I SGNVE A MR G+ PD++ Y + I ++ LK+A LF
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++K + P+++TY LL R G L E ++
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARR 428
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 153/378 (40%), Gaps = 63/378 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL + K+ +P++ ++D G C GD ++R
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD--GYCRLGDLEEARRFK 430
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ Q ++ + LMN + +L E + M G+ D +YN + A +
Sbjct: 431 QEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+T E + + + ++G+ D TY+ + + + A + M+S G+ P+
Sbjct: 491 GST---SEAFQLTEVMISRGI-SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A G + +A +F+ ML +G P++ + + A + R L+
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA------YCRRGNLY- 599
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTT 515
S Y F K +P
Sbjct: 600 ------------------------------------------SAYGWFQKMLEEGVRPNE 617
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN+L+ A C A +EM GLSPN ++T+LID GN E A+++
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677
Query: 574 MREDGMSPDVVAYTTAIK 591
M + G+ PD + K
Sbjct: 678 MHQHGIHPDHCTHNALFK 695
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 43/360 (11%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK- 360
A+ L LE++K + G + A+Y T + Q +Y + EAK
Sbjct: 312 ANRLDDALELFKLLSSYGCKPNAATY------------TTIIQGLYDAQRMEEAKAFFDE 359
Query: 361 -LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
LDV +Y+T++K AD+K A ++ E + +AG +PN + ++++I+ AG +E +
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
FE+M + C P +++ +A A ++F + K V Y D
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM-VQKGCVPDTITYTTLIDGF 478
Query: 480 SNMEHKDKQS------ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYY-R 531
S D+ +T P +PT TY ++ C D
Sbjct: 479 SKASKMDEARKLLDVMLTKGP-----------------EPTAVTYGSIVHGFCKLDMINE 521
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K ++ +MR G P +T L+ G E A Q+L M G +PDV+ YT+ I
Sbjct: 522 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 581
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + R+ +A +F+ M P+ +TY T+++ S+ G++ + L + M K+G
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL---MAKSG 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 174/427 (40%), Gaps = 61/427 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
I + + F K + A + D P +I+ G C M +++ +
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH--GFCKLDMINEAKEVI 526
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R + +++F SL++ ++ + +V M G D+ Y L+
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + KG D TY TI++ F+ + A ++ E M +GV P+
Sbjct: 587 GRVPEARHVF---DSMIEKGCAP-DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++SL++ V+QA +++ M+ +G +PN+ N+L+ + + DRAF LF+
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
M KD+ VP PT +
Sbjct: 703 -----------------------EMLEKDE---------VP--------------PTLVS 716
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ +A EM G+ P ++T LI + +G + A ++++ M
Sbjct: 717 YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL---LRARSRYG 632
+ G++PDV AY+ I + S + A+ +F+EM PN VTY L RA R
Sbjct: 777 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 836
Query: 633 SLHEVQQ 639
L V+Q
Sbjct: 837 DLEAVKQ 843
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 199/479 (41%), Gaps = 60/479 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E L++ + N+ + ++++ + A ++ L+ +++M + +Y +++ C
Sbjct: 385 LFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLC 444
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A +++ + + KG + D TY+T++ F+ A A K+ + ML+ G
Sbjct: 445 KAQMLPDACKVF---EQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+ S+++ ++ +A + +M + GCEP LL + + + A+++
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 456 FRSWTLS--KTQVALGE---DYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF 509
T V L D +T R+ H I P++ Y + + F
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNF 618
Query: 510 S-------------------FKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGL 544
S P YN LM Y +++ + + M G+
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG----YVKLERVDQAFGVYDRMVASGI 674
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ +L+ G + A + K M E D + P +V+YT I ++ R+ +AF
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
S F+EM I P TY +L+ + ++ G + E ++ + +DM K G + LI
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK---LVEDMVKLGVNPDVQAYSALI 791
Query: 664 EEWCEGVIQD-----------KNQNQGEVT--LCRRTNSQRPQSLLLEKVAVHLQKSAA 709
+ + D + EVT + RR ++L LE V H + A
Sbjct: 792 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVA 850
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 197/513 (38%), Gaps = 113/513 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
P++ C +++ G+C +AI + ++ S I +N++++ A K E
Sbjct: 18 PDVVNCNIVLN--GLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMD-EA 74
Query: 312 YK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL---EAKGVLKLDVFT 365
YK +M G D+ ++ L+ C AG +V H+ +A + DVF
Sbjct: 75 YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQP--------QVGHMLLNQALKRFRPDVFL 126
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT--------------------------- 398
Y++++ + A K+ E+ML+AG P+
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 399 --------ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+T+ +LI A +N G +++A L+ EM++ G EP + + L+ A +A + D
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 451 RAFRLFRSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSF 505
A ++++ K ++VA DG ++ ++ K + NF Y+
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYC-KLGRVDDGLKLLLQMVECDNFPDIQTYNIL 305
Query: 506 DKRFS-------------------FKPTTTTYNILMKAC--------------------- 525
FS KP TY +++
Sbjct: 306 VAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS 365
Query: 526 -------CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
D R+ L +++T G SPN +++T +ID +G +E L+ + M
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
P YT I +++ L A +FE+M P+ +TY TL+ S+ +
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
E ++ L V M G + ++ +C+
Sbjct: 486 EARKLLDV---MLTKGPEPTAVTYGSIVHGFCK 515
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 60/359 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+ K M G+M D+ + NI+L C A A E++ E+ + + + +Y+T
Sbjct: 5 LDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPT----IVSYNT 60
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-------LVEQAMHLF 421
++ A A K M+ G P+ I +++LI+ AG L+ QA+ F
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 422 ---------------------------EEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
EEML AGC P++ +L+ + + D A+
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 455 LFRSWTLSKTQVALGEDYDGNT--DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
LF S LG+ T + +SN D+ Y +R ++
Sbjct: 181 LFERMRKSG---CLGDYVTFMTLIEALSNHGKLDEAC----------ELYREMIER-GYE 226
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEM-RTV---GLSPNHISWTILIDACGGSGNVEGAL 568
P + L+ A C +A NE+ +TV ++ + +++ L+D G V+ L
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEA--NEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L M E PD+ Y + R+ RL A LF+ + Y +PN TY T+++
Sbjct: 285 KLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 52/297 (17%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL ++M + G+ P+ + + ++N A +++A+ LF EM GCEP N ++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A++ F S I N
Sbjct: 64 GLASIDKMDEAYKFFNSM-------------------IDN-------------------- 84
Query: 502 YSSFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P + L+ C +V ++ P+ +T +I
Sbjct: 85 --------GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCK 136
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G+++ +IL+ M G PD AY I + R+ +A+ LFE M+ + VT
Sbjct: 137 AGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT 196
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
++TL+ A S +G L E + +Y++M + GY+ LI C+ G + + N+
Sbjct: 197 FMTLIEALSNHGKLDEACE---LYREMIERGYEPYLEVQDSLIFALCKAGKVDEANE 250
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E AL LK M G+ PDVV + +++++ +A LF EM +P +V+Y T
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ-GEVT 682
++ S S+ ++ + + M G + + LI +C+ Q Q G +
Sbjct: 61 VI---SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA-----GQPQVGHML 112
Query: 683 LCRRTNSQRPQSLLLEKV 700
L + RP L V
Sbjct: 113 LNQALKRFRPDVFLYTSV 130
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 34/334 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++K M+ G+ ++ +Y+ L+ C G A + ++ +E K + DVFT+S
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM--IERK--INPDVFTFSA 331
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F A K+ ++M+ + P+ +T+SSLIN +++A +FE M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C P+ + L++ +A + D LFR T++ T + G G+ D
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NE 538
+ K+ +++ VP P TYN L+ C + KA++
Sbjct: 452 EIF---KEMVSDG---VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
++ + P ++ I+I+ +G VE + + G+ PDVVAY T I R
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A +LF+EMK PN Y TL+RAR R G
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 170/394 (43%), Gaps = 38/394 (9%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ VT N + ++ A + + + M G D+ +Y +++ C G+T L
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASE---AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + +++ +G L+ V Y+TI+ K AL + ++M + G+ PN +T+S
Sbjct: 240 AFILLNKME----QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ N G A L +M++ P+ + L+ A V+ + A +L
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL------- 348
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------PTTT 516
YD R + S+ N F + + F F P
Sbjct: 349 ---------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+Y+ L+K C RV L EM GL N +++T LI +G+ + A +I K
Sbjct: 398 SYSTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE 456
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + TY ++ + G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG- 515
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+V+ ++ ++ G K + +I +C
Sbjct: 516 --KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 187/433 (43%), Gaps = 46/433 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +A+ L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+ D AF L K T + G + + D N+ K+ ++
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL-FKEMETKGIR 288
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T++ L+ A + V+A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + P+ ++++ LI+ ++ A Q+ + M PDVV+Y+T IK +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+KR+ + LF EM + N VTY TL++ + G Q+ ++++M G N
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE---IFKEMVSDGVPPN 465
Query: 656 DTYLKELIEEWCE 668
L++ C+
Sbjct: 466 IMTYNTLLDGLCK 478
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 160/393 (40%), Gaps = 55/393 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + + AL + + PN+ ++I G + + + D
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +++ F++L++ + K ++Y M K + + +Y+ L+ C+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++++ + + +K DV +YST++K F AK +++ +M G+ NT+
Sbjct: 377 LDEAKQMF---EFMVSKHCFP-DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI AG + A +F+EM+ G PN N LL + + ++A +F
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK + PT TYN
Sbjct: 493 QRSKME-----------------------------------------------PTIYTYN 505
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+++ C L + G+ P+ +++ +I G+ E A + K M+ED
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G P+ Y T I+ +R + + L +EM+
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 144/334 (43%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ SY+ L+K C A E++ E+ G + TY+T++
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYTTLI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 23/243 (9%)
Query: 191 LDEEFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
LDE ++ + V+K PDV + + ++ F K + + + +
Sbjct: 377 LDEAKQMFEFMVSKHCFPDV--------------VSYSTLIKGFCKAKRVDEGMELFREM 422
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ N T+I GD ++ I++++ S V NI +N+L++ L
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ + V++ +Q+ + + +YNI+++ C AG +++ +L KGV K DV
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC---NLSLKGV-KPDVVA 538
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ F + A + ++M G PN+ +++LI A G E + L +EM
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 426 QAG 428
G
Sbjct: 599 SCG 601
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 152/355 (42%), Gaps = 34/355 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ M K G++ D +Y IL+ C A T LA ++ H + KG K DVFTY
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL-----HEKMKGNCKGDVFTYGM 1090
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ AL + +M+ AG+ P+ + +SSL++ G +++A+ F+EM G
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150
Query: 429 CEPNSQCCNILLQACVEACQF-----------DRAFRLFRSWTLSKTQVAL-GEDYDGNT 476
+ N L+ A + DR F ++T + L E G
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP-DAFTFTILIDGLCKEGKVGEA 1209
Query: 477 DRISN-MEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+I M HK K+ T N + N + S R K +YNIL+
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILIN 1268
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D +A EMR GL P+ +++ LI A SG V A ++ M+ G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ Y + ++ L++A LF+ +K + +PN+ + LL R G L E
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 174/386 (45%), Gaps = 25/386 (6%)
Query: 263 IDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKL 318
I + G+C AI +E ++ N +++ + +++ D T L+++ M
Sbjct: 1056 ILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGA 1114
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ D+ Y+ L+ C G A E + K +E +G+ DV+TY++++ + A
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFF---KEMEGRGI-SADVYTYNSLIHGLSRAGL 1170
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ M+ G +P+ T++ LI+ G V +A + E M G EP+ N
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ Q + A +LF S L+ + L + N + N KD Q I F
Sbjct: 1231 LMNGLCLVGQLEDATKLFES--LADRGIKLNV-FSYNI--LINGYCKD-QKIDEAFRFFE 1284
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILI 555
KP+T TYN L+ A C RV+ L EM+T G ++ +L+
Sbjct: 1285 EMRPKGL------KPSTVTYNTLIGALCQSG-RVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D +G++E A+ + + +++ P++ ++ + R+ +L++A+ F+E+ ++
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P+ + Y L+ G L E + L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLL 1423
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 174/418 (41%), Gaps = 49/418 (11%)
Query: 262 IIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
IID +C D M + A+ + ++ + ++ V++SLM+ LK LE +K M+
Sbjct: 1091 IID--ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ AD+ +YN L+ AG L +E+ + + +G D FT++ ++
Sbjct: 1149 RGISADVYTYNSLIHGLSRAG---LWKEVTWFLNLMVDRG-FSPDAFTFTILIDGLCKEG 1204
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A ++ E M G P+ +T+++L+N G +E A LFE + G + N N
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264
Query: 438 ILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LGEDYDGNTDRISNMEHKDKQSI 490
IL+ + + D AFR F R L + V +G R + + Q+
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 491 TN----------TPNFVPNSHYS-SFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA 534
N H + D K+ KP ++IL+ C +A
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+E+ GL P+ I++ ILI+ G + A+++L M E G PD + + I+
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + +A L EEM++ P+ LL CLA + W A
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL--------------CLASFDPQWHA 1488
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 148/350 (42%), Gaps = 61/350 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + +ID G+C G +++ I E +R + +I +N+LMN L+
Sbjct: 1187 SPDAFTFTILID--GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++++ G+ ++ SYNIL+ C A + E++ KG LK TY+T
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR---PKG-LKPSTVTYNT 1300
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K+ +M + G T+ L++ G +E+AM LF+ + +
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN + +ILL A + + A++ F D IS
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQF--------------------DEIS-------- 1392
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +P T YNIL+ C +A L+ +M G P
Sbjct: 1393 -------------------KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ I++ ++I + A+Q+L+ MR SPD T++ +C+ S
Sbjct: 1434 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD--EAVTSMLLCLAS 1481
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 21/299 (7%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+K+ + L + P T T++ L+ + A G ++ ++ G +P+ NIL+
Sbjct: 930 AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C C RA + D T + + + N +P++
Sbjct: 990 CC---CSL-RAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWME---------NGIPDA- 1035
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISWTILIDAC 558
FD+ + TY IL+ C A+ ++E + ++ ++IDA
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDAL 1095
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G AL + M G+ PDVV Y++ + R RLK+A F+EM+ I ++
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
TY +L+ SR G EV L + D G+ + LI+ C EG + + Q
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVD---RGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 50/256 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G P+ +T ++L+ + A+ LF+EM + G +++ IL+ +A +
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L E GN
Sbjct: 1068 GLAIKLH-------------EKMKGNC--------------------------------- 1081
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
K TY +++ A C D +AL +EM G+ P+ + ++ L+D G ++ A
Sbjct: 1082 --KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L+ K M G+S DV Y + I R+ K+ M P+ T+ L+
Sbjct: 1140 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199
Query: 628 RSRYGSLHEVQQCLAV 643
+ G + E QQ L +
Sbjct: 1200 LCKEGKVGEAQQILEL 1215
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 37/368 (10%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ Y+ ++ + C + A ++ E
Sbjct: 211 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--- 265
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ KG+ + DVFTYS+++ + W A ++ DML + PN +T++SLI+A A G
Sbjct: 266 MDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A LF+EM+Q +PN N L+ C DR + +TL ++ L +
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 473 DGNT---------------DRISNMEHKDKQSITNTPNFVPNSHYSSFD---KRFSFK-- 512
NT + +M + T T + + + + D + FK
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 513 ------PTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C + KA++ ++ + P+ ++ I+ + +G V
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E + + G+ PDV+AY T I + ++A++LF +MK P+ TY TL
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 625 LRARSRYG 632
+RA R G
Sbjct: 562 IRAHLRDG 569
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 186/439 (42%), Gaps = 36/439 (8%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD ++ LS N + + + + G+ +KSR +I F+ L++ A
Sbjct: 28 SYDGYREKLSR-NALLHLKLDEAVDLFGEMVKSRPFP----------SIVEFSKLLSAIA 76
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + M+ LGV ++ +YNI++ C A I G++ L
Sbjct: 77 KMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--- 133
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ T ++++ F A+ + + M+ G P+T+T+++L++ +A+ L
Sbjct: 134 -SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M+ GC+P+ ++ + + D A L K + + Y D +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VIYSTVIDSLC 251
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMN 537
H D + N ++ D + +P TY+ L+ +C +Y R L++
Sbjct: 252 KYRHVD-----DALNL-----FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLS 299
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M ++PN +++ LIDA G + A ++ M + + P++V Y + I
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
RL +A +F M P++VTY TL+ + +V + +++DM + G N
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLING---FCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 658 YLKELIEEWCEGVIQDKNQ 676
LI + + D Q
Sbjct: 417 TYTTLIHGFFQASDCDNAQ 435
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 152/325 (46%), Gaps = 24/325 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+ C A V E++ + + +G++ + TY+T++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF---RDMSRRGLVG-NTVTYTTLI 422
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A A V + M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NI+ + +A + + + LF S +L + D IS K
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMISGFCKKG---- 534
Query: 491 TNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ Y+ F K P + TYN L++A D + + L+ EMR+ +
Sbjct: 535 ------LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Query: 547 NHISWTILIDACGGSGNVEGALQIL 571
+ ++ ++ D +G L++L
Sbjct: 589 DASTYGLVTDMLHDGRLDKGFLEVL 613
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 173/373 (46%), Gaps = 28/373 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD ++R ++ + + N Y F L+N K +
Sbjct: 194 SPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD 253
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G+ ++ +YN L+ C G A +++ E++ +GV + +V TY+T++
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRE---RGV-EANVVTYNTLI 309
Query: 371 KVFA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A K+ + M A V+PN IT+++LI + G +++A L +++ G
Sbjct: 310 GGMCREERVWE-AEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGL 368
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKD 486
P+ NIL++ +A + L R +S ++V D R+ ME
Sbjct: 369 SPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV-RLQEMEKAF 427
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ YSS +K F P Y +L+ C + L M + +
Sbjct: 428 QI-------------YSSMEK-FGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHV 473
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ + + +I N AL++L+ M G+ P+V +Y++ I V + + ++A
Sbjct: 474 EPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEV 533
Query: 605 LFEEMKHYQIQPN 617
L ++M Q++P+
Sbjct: 534 LLDKMIELQLKPS 546
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 173/403 (42%), Gaps = 32/403 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-VYKNMQKLGVMADMASYNILLK 332
K+ + ++ + + +FNSL+ F ++ N K V D+ S+ I++K
Sbjct: 111 KALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIK 170
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC GN + ++ G ++ + L +V Y+T++ + A + M
Sbjct: 171 GCCENGNLDKSFQLLGLLQDMG----LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEM 226
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ N T++ LIN GL + LFE+M G PN N L+ + RA
Sbjct: 227 GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286
Query: 453 FRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F LF R + V G +R+ E Q K
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM-----------------K 329
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + P TYN L+ C + + +L++++++ GLSP+ +++ ILI+ +GN +
Sbjct: 330 KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWK 389
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G + + M G+SP V T I VR + +++AF ++ M+ + + P++ Y L+
Sbjct: 390 GVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLI 449
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G++ E + +++ M + + +D +I +C+
Sbjct: 450 HGLCMKGNMKESSK---LFRSMGEMHVEPSDVIYNTMIHGYCK 489
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A + D KK SPN+ T+I G C G+ K+ ++ + L+S ++ ++ +N L
Sbjct: 321 AEKLVDQMKKAAVSPNLITYNTLIG--GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNIL 378
Query: 298 MN-------------------------------------VNAHDLKFTLEVYKNMQKLGV 320
+ V +++ ++Y +M+K G+
Sbjct: 379 IEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438
Query: 321 MADMASYNILLKACCLAGNTVLAQEIY---GEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ D+ Y +L+ C+ GN + +++ GE+ H+E V+ Y+T++ +
Sbjct: 439 VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM-HVEPSDVI------YNTMIHGYCKED 491
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL++ +M + G+ PN ++SS+I G E+A L ++M++ +P++ N
Sbjct: 492 NSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551
Query: 438 ILLQA 442
++ +A
Sbjct: 552 MISKA 556
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 51/361 (14%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G PN ++ ++L+ A G A +F M +G EP++ I+L+ VE +
Sbjct: 142 MNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNK 201
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHY 502
F A +F + L+K L D + N E K VP S
Sbjct: 202 FKEAEEVFET-LLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTV 260
Query: 503 S-----SFD-------------KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNE 538
+ SF+ +R +P +Y +L+KA Y R + A+ E
Sbjct: 261 TYNSLMSFETNYKEVSKIYDQMQRSGLRPDVVSYALLIKA----YGRARREEEALAVFEE 316
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+H ++ IL+DA SG VE A + K MR D +PD+ +YTT + V +
Sbjct: 317 MLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASD 376
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ A + F+ ++ ++PN+VTY L++ ++ +L ++ + +Y++M KAN T
Sbjct: 377 MEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNL---EKMMEIYEEMQLNSIKANQTI 433
Query: 659 LKELIEEWCEGVIQDKNQNQGEVTLCRR-------TNSQRPQSLLLEKVAVHLQKSAAEN 711
L +++ + KN++ G + + Q+ Q++LL ++ A
Sbjct: 434 LTTIMDAYG------KNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKEASQ 487
Query: 712 L 712
L
Sbjct: 488 L 488
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 133/354 (37%), Gaps = 89/354 (25%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +I + G+Y K+R ++ + + V + +NSLM+ + K ++Y
Sbjct: 222 PDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFET-NYKEVSKIYD 280
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ G L+ DV +Y+ ++K +
Sbjct: 281 QMQRSG---------------------------------------LRPDVVSYALLIKAY 301
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A+ + AL V E+ML AGV P+ ++ L++A A +G+VEQA +F+ M + C P+
Sbjct: 302 GRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDL 361
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+L A V A + A F+ L +D
Sbjct: 362 CSYTTMLSAYVNASDMEGAENFFKR---------LRQD---------------------- 390
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP TY L+K A + ++ + EM+ + N
Sbjct: 391 ----------------GLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTIL 434
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
T ++DA G + + A+ K M G+ PD A + + K+A L
Sbjct: 435 TTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKEASQL 488
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 167/438 (38%), Gaps = 87/438 (19%)
Query: 217 VPRADILFCNFVR-EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR D++ VR + KK DLVS + + S+ H N +I G GD+ +
Sbjct: 78 LPR-DLVLGTLVRFKQLKKWDLVSEILEWLQSQ-HWWDFNEMDFLMLITAYGKLGDFNGA 135
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
+ + N+ +LM ++ +++ MQ G +Y I+LK
Sbjct: 136 EMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKT 195
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGV------------LKLDVFTYSTIVKVFA------- 374
A+E++ + + E + ++ Y KVFA
Sbjct: 196 FVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGV 255
Query: 375 -------------DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ + +++ K+ + M +G+ P+ ++++ LI A A E+A+ +F
Sbjct: 256 PQSTVTYNSLMSFETNYKEVS-KIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVF 314
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EEML AG P+ + NILL A + ++A +F+S DR +
Sbjct: 315 EEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSM---------------RRDRCT- 358
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
P +Y ++ A +D + +
Sbjct: 359 -------------------------------PDLCSYTTMLSAYVNASDMEGAENFFKRL 387
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R GL PN +++ LI N+E ++I + M+ + + + TT + ++K
Sbjct: 388 RQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDF 447
Query: 600 KQAFSLFEEMKHYQIQPN 617
A ++EM+H+ + P+
Sbjct: 448 GSAVIWYKEMEHHGVPPD 465
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN 301
+ YD ++ P++ +I G ++ A++E++ V + +N L++
Sbjct: 277 KIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAF 336
Query: 302 AHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A + +E V+K+M++ D+ SY +L A A + A+ + K L G
Sbjct: 337 A--ISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFF---KRLRQDG 391
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
LK +V TY ++K A + +++ E+M + N +++++A A
Sbjct: 392 -LKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSA 450
Query: 418 MHLFEEMLQAGCEPNSQCCNILL 440
+ ++EM G P+ + NILL
Sbjct: 451 VIWYKEMEHHGVPPDQKAQNILL 473
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
++ + H+ F++ F T Y L D+ + ++ M G PN +S T L+
Sbjct: 105 WLQSQHWWDFNE-MDFLMLITAYGKL-----GDFNGAEMVLRSMNGNGYVPNVVSHTALM 158
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM---KHY 612
+A G G A I + M+ G P + Y +K V + K+A +FE + ++
Sbjct: 159 EAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENS 218
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
++P+ + ++ + + G+ + ++ A+
Sbjct: 219 PLEPDQKMFHMMIYMQKKAGNYEKARKVFAL 249
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 163/392 (41%), Gaps = 74/392 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSS----PNMYICRTIIDVCGIC--GDYMKS 275
+ F + + RDL A D K +S P++Y +I G C G +
Sbjct: 221 VTFNTLISGMCRARDL----DAVDGLYKEMSDVGVKPDVYTYGALIK--GFCRTGRMENA 274
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++R V N VF +L ++AH ++ +++Y++M+ GVM D+ +YN L+
Sbjct: 275 VKMFNEMRDTGVNPNAVVFTTL--IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A N A+ I E+K+ LK D TY+T++ MA+ +K+ M
Sbjct: 333 NGLCRARNLKAAESIVEEMKN----AGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAE 388
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V+ + +T+++LI+ + AG A + EM++A EP++ +++ A
Sbjct: 389 KEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKT 448
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F+L + M++K K
Sbjct: 449 GFKLLKE-----------------------MQNKGK------------------------ 461
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYN++M C L++ M +G+SP+ I++ IL+D G V + +
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ GM PD YT+ I + K K
Sbjct: 522 ---LESSKGMVPDFAVYTSLISELAKKKPAKN 550
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 161/374 (43%), Gaps = 56/374 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + +R +++++R ++V + FN+L++ A DL +YK M +GV D+ +Y
Sbjct: 200 GELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTY 258
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+K C G A +++ E++ GV + ++T++ + + +
Sbjct: 259 GALIKGFCRTGRMENAVKMFNEMRD---TGV-NPNAVVFTTLIDAHCKEGNVNAGMDLYQ 314
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM GV P+ + +++L+N A ++ A + EEM AG +P+ L+ C +
Sbjct: 315 DMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDG 374
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A + +++ +V+L E
Sbjct: 375 KLDMAMDI--KQKMAEKEVSLDE------------------------------------- 395
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
TY L+ V A ++ EM L P++ ++T++IDA G+V+
Sbjct: 396 --------VTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVK 447
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++LK M+ G P VV Y + + ++K A L M + + P+ +TY LL
Sbjct: 448 TGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507
Query: 626 RARSRYGSLHEVQQ 639
+ ++G + ++
Sbjct: 508 DGQCKHGKVANSEE 521
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 150/380 (39%), Gaps = 59/380 (15%)
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FN LM V +L +V+ M++ V + ++N L+ C A + +Y E+
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYKEM 246
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ GV K DV+TY ++K F + A+K+ +M GV PN + +++LI+A
Sbjct: 247 SDV---GV-KPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V M L+++M G P+ N L+ L R+ L + + E
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNG------------LCRARNLKAAESIVEE 350
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
K KP TY L+ CC D
Sbjct: 351 -----------------------------------MKNAGLKPDKVTYTTLIDGCCKDGK 375
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A+ +M +S + +++T LI +G A ++L+ M E + PD YT
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I R +K F L +EM++ +P +VTY ++ + G + L M
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLL---HAML 492
Query: 649 KAGYKANDTYLKELIEEWCE 668
G +D L++ C+
Sbjct: 493 NIGVSPDDITYNILLDGQCK 512
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 24/235 (10%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--TLSKTQVALGEDYD 473
+A + ++L AG P ++ N+L++ V + A ++F ++ T V
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTF----- 223
Query: 474 GNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
NT IS M +D ++ + Y KP TY L+K C
Sbjct: 224 -NT-LISGMCRARDLDAV--------DGLYKEMSD-VGVKPDVYTYGALIKGFCRTGRME 272
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A + NEMR G++PN + +T LIDA GNV + + + MR G+ PD+VAY +
Sbjct: 273 NAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH---EVQQCLA 642
R++ LK A S+ EEMK+ ++P+ VTY TL+ + G L +++Q +A
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 21/304 (6%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R +D V G+ K+++++GV P G+ L+K C+ +G +E V + + +
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGA---LIKGFCR----TGRMENAVKMFNEMRDT 284
Query: 185 RLPVKELDEEFRIVQLC----VNKP-DVNLAIRYACIVPRADILFCN-FVREFGKKRDLV 238
+ + I C VN D+ +R ++P D++ N V + R+L
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP--DLVAYNALVNGLCRARNLK 342
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+A + K P+ T+ID C G + I + + + V+L+ + +L+
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A V + M + + D +Y +++ A C G+ ++ +K ++ K
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKL---LKEMQNK 459
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K V TY+ I+ + A + ML+ GV+P+ IT++ L++ G V
Sbjct: 460 GK-KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVAN 518
Query: 417 AMHL 420
+ L
Sbjct: 519 SEEL 522
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 87/413 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRAS-EVLR 317
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+ +G++ D SYNIL++ C G N
Sbjct: 318 EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 377
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 378 KIEAAEIL--IREIREKGIV-LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQF 434
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 435 TYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
R + P TYN
Sbjct: 495 -----------------------------------------------DRMNIDPDDVTYN 507
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 508 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSL 567
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S+
Sbjct: 568 GFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 187/451 (41%), Gaps = 52/451 (11%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + + R + A+ + K+ P C I+ + +
Sbjct: 154 KSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVF 213
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV LK M+ G+ + +YN L++ L
Sbjct: 214 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSL 273
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 274 RGRIEGARMIISEMK---SKG-FQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVP 326
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 327 DSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 386
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSF--- 511
R E ++K + + T N V N + D + +F
Sbjct: 387 R-------------------------EIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421
Query: 512 --------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
KPT TY L+ C +A L ++ G+ P+ + L+D +
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT 481
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN++ A +LK M + PD V Y ++ + ++A L EMK I+P+ ++Y
Sbjct: 482 GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 541
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
TL+ S+ G + + V +M G+
Sbjct: 542 NTLISGYSKKG---DTKHAFIVRDEMLSLGF 569
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 132/347 (38%), Gaps = 58/347 (16%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ +V+ + + A++ M G P T T + +++ + +E A + +M
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDR---- 478
+ + N NI++ + + +A + S+ + T V G + R
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278
Query: 479 -----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
IS M+ K F+P TYN ++ C + R
Sbjct: 279 GARMIISEMKSK------------------------GFQPDLQTYNPILSWMCNEG-RAS 313
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ EM+ +GL P+ +S+ ILI C +G++E A M + GM P Y T I
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+++ A L E++ I + VTY ++ ++G + ++ A++ +M G K
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHG---DAKKAFALHDEMMTDGIK 430
Query: 654 ANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKV 700
LI LCRR N R L EKV
Sbjct: 431 PTQFTYTSLI-----------------YVLCRR-NKTREADELFEKV 459
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ N+ + +N LM + KF E+
Sbjct: 466 PDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAREL 525
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 526 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL----LTYNALLK 581
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + ++A ++ +M S G+ PN ++ S+I A + +
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 23/344 (6%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ YN ++ C + A +++ +
Sbjct: 221 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK--- 275
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ K DVFTY+ ++ + W A ++ DML + P+ + +++LI+A G
Sbjct: 276 METKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 413 LVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ +A L++EM+++ C P+ N L++ + + + +FR +S+ +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE--MSQRGLV---- 388
Query: 472 YDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
GNT + + H Q+ + V S P TYNIL+ C +
Sbjct: 389 --GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-----GVHPDIMTYNILLDGLCNNGN 441
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL+ M+ + + +++T +I+A +G VE + + G+ P+VV YTT
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 58 DAIGLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+I + C LA I G++ L + T ++++ F
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP----SIVTLNSLLNGFCHGNRISE 163
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++L++ +A+ L E M+ GC+P+ ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L K + + Y+ D + +H D
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADV-VIYNTIIDGLCKYKHMDDA------------- 269
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID 556
+ F+K + KP TYN L+ +C +Y R L+++M ++P+ + + LID
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 557 ACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A ++ ++++ PDVVAY T IK + KR+++ +F EM +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 616 PNLVTYITLLRA 627
N VTY TL+
Sbjct: 389 GNTVTYTTLIHG 400
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 57/352 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ C G LA + +++ KG ++ DV Y+TI+ K
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME----KGKIEADVVIYNTIIDGLCKYKH 265
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M + G+ P+ T++ LI+ N G A L +ML+ P+ N
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L+ SK
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCF-------------------------------- 353
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
P YN L+K C Y RV+ M EM GL N +++T LI
Sbjct: 354 --------------PDVVAYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ + + A + K M DG+ PD++ Y + + ++ A +FE M+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++VTY T++ A + G +V+ ++ + G K N ++ +C
Sbjct: 459 LDIVTYTTMIEALCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK--- 274
D++F N + F K+ LV A + YD KH P++ T+I G C Y +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-CFPDVVAYNTLIK--GFC-KYKRVEE 374
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ ++ + + N + +L++ A D V+K M GV D+ +YNILL
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++ ++ + +KLD+ TY+T+++ A + + +
Sbjct: 435 GLCNNGNVETALVVFEYMQKRD----MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
GV PN +T++++++ GL E+A LF EM + G PNS N L++A
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL + +K ++ I TIID G+C A ++ + ++ + +++ +N L
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIID--GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ N + +M + + D+ +N L+ A G V A+++Y E+ +++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM--VKS 349
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K DV Y+T++K F K + ++V +M G+ NT+T+++LI+ A +
Sbjct: 350 KHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A +F++M+ G P+ NILL + A +F + K + L D
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE--YMQKRDMKL--DIVTY 464
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VK 533
T I + K + + + + S + KP TY +M C +
Sbjct: 465 TTMIEALCKAGK--VEDGWDL-----FCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL EM+ G PN ++ LI A G+ + +++K MR G + D + +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM- 575
Query: 594 VRSKRLKQAF 603
+ RL ++F
Sbjct: 576 LHDGRLDKSF 585
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 114/310 (36%), Gaps = 53/310 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS + F +AL + M+ G P+ +T +SL+N + + +A+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M++ G +P++ L+ + + A L + Q
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------------- 212
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
P TY ++ C AL +N+M
Sbjct: 213 -------------------------------PDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + + +ID +++ A + M G+ PDV Y I R
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY- 658
A L +M I P+LV + L+ A + G L E ++ +Y +M K+ + D
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK---LYDEMVKSKHCFPDVVA 358
Query: 659 LKELIEEWCE 668
LI+ +C+
Sbjct: 359 YNTLIKGFCK 368
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ L+ A + V +L +M+ +G+S N +++I I+ + AL I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + R+ +A +L ++M QP+ VT+ TL+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 631 YGSLHE 636
+ E
Sbjct: 193 HNKASE 198
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 163/405 (40%), Gaps = 60/405 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 99 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAY 157
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV +
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L +
Sbjct: 274 MVDRAFEMIRNLELKGCE------------------------------------------ 291
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 292 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 346
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEG 669
+ G + Q L ++ + + G N + + W G
Sbjct: 407 ATLCKNG---KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 193/486 (39%), Gaps = 99/486 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 119 DVILCTKLIKGFFTLRNVPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 175
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V + L++ N T
Sbjct: 176 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATM 235
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ +++LE KG +
Sbjct: 236 LEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---IRNLELKGC-E 291
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 292 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 394
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 395 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 424
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 425 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGM 484
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +AF L +M+ + P++VTY +L + H ++ + V M G + N+T
Sbjct: 485 VDKAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAIDVLDSMVGNGCRPNETT 541
Query: 659 LKELIE 664
LIE
Sbjct: 542 YTVLIE 547
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 28/339 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL+ D P+M+ TII G+C + M RA + +L + ++ +N L
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIR--GMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + K+ E K M K+ ++ +Y+IL+ C G +E +K ++
Sbjct: 301 LRALLNQGKWE-EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI---EEAMNLLKLMK 356
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG L D ++Y ++ F +A++ E M+S G P+ + +++++ G
Sbjct: 357 EKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA+ +F ++ + GC PNS N + A + RA + V+ G D D
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM------VSNGIDPD- 468
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYRVK 533
+ + S V + D R F P+ TYNI++ C +
Sbjct: 469 ------EITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 522
Query: 534 AL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
A+ ++ M G PN ++T+LI+ G +G A+++
Sbjct: 523 AIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 28/285 (9%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-TLSKTQ 465
+C + +E ++HL E M++ G P+ C L++ +A R+ +
Sbjct: 95 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPD 153
Query: 466 V----ALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
V AL + D T + M KD T T N + S S + K
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 513 --------PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TY IL++A + +AL ++EM + GL P+ ++ +I G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ A ++++ + G PDV++Y ++ + + ++ L +M + PN+VTY
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ R G + E L + M + G + LI +C
Sbjct: 334 ILITTLCRDGKIEEAMNLLKL---MKEKGLTPDAYSYDPLIAAFC 375
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L LE+ N G+ D +YN ++ C G A E+ +++ E V
Sbjct: 454 LHMILEMVSN----GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE----FHPSVV 505
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F A + A+ V + M+ G PN T++ LI AG +AM L ++
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Query: 425 LQ 426
++
Sbjct: 566 VR 567
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 200/458 (43%), Gaps = 46/458 (10%)
Query: 222 ILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++F N + + + KK DL A R K P + +I+ G C G++ +
Sbjct: 236 VVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALIN--GFCKAGEFEAVDQL 293
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKA 333
++ ++ + +N+ VFN++++ + K+ L E + M ++G D+ +YN ++
Sbjct: 294 LTEMAARGLNMNVKVFNNVIDA---EFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINF 350
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E + K +G+L + F+Y+ ++ + + A + + G
Sbjct: 351 SCKGGRIKEADEFLEKAKE---RGLLP-NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIG 406
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ +++ + I+ G ++ A+ + E+M++ G P++Q N+L+ + +F A
Sbjct: 407 EKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP-AM 465
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---- 509
+L S L + N++ T F+ N K F
Sbjct: 466 KLLLSEMLDR-----------------NVQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508
Query: 510 --SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN ++K C AL +N+M+ V +P+ +++ +ID ++
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M + P+V+ YT+ I + + +A +F MK + + PN+VTY TL+
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G + ++ ++++ M G ND LI
Sbjct: 629 GGFFKAG---KPEKATSIFELMLMNGCPPNDATFHYLI 663
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 170/415 (40%), Gaps = 27/415 (6%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
T I V G+C G + R + +D + ++ +N +++ DL+ K ++
Sbjct: 204 TSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELK 263
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
GV+ + +Y L+ C AG ++ E + A+G L ++V ++ ++
Sbjct: 264 MKGVLPTVETYGALINGFCKAGEFEAVDQLLTE---MAARG-LNMNVKVFNNVIDAEFKY 319
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A + M G P+ T++++IN G +++A E+ + G PN
Sbjct: 320 GLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSY 379
Query: 437 NILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ A C + A LFR +GE D +S + +
Sbjct: 380 TPLMHAYCKQGDYVKAAGMLFRI-------AEIGE----KPDLVSYGAFIHGVVVHGEID 428
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTI 553
+K P YN+LM C + + +K L++EM + P+ +
Sbjct: 429 VALMVREKMMEK--GVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFAT 486
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+D +G ++ A++I K++ G+ P +V Y IK + ++ A S +MK+
Sbjct: 487 LMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVH 546
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P+ TY T++ Y H++ L ++ M K +K N LI +C+
Sbjct: 547 HAPDEYTYSTVIDG---YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCK 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 117/299 (39%), Gaps = 64/299 (21%)
Query: 124 IREGRIDCVVGVLKKLNELGVAP---------LELFDGSGFKLLKNECQRLLDSG---EV 171
+ G ID + V +K+ E GV P L F +K +LD +V
Sbjct: 422 VVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDV 481
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
+F LM+ + ELDE +I ++ + K + Y ++ FC +F
Sbjct: 482 YVFATLMDGF----IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG----FC----KF 529
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D +S L + K +P+ Y T+ID Y+K
Sbjct: 530 GKMTDALSCL---NKMKNVHHAPDEYTYSTVID------GYVKQ---------------- 564
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
HD+ L+++ M K ++ +Y L+ C + + A++++ +K
Sbjct: 565 -----------HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMK 613
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +V TY+T+V F A + A + E ML G PN T+ LIN N
Sbjct: 614 SFD----LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYT 587
+ ++ ++ M+ L P +++ LI A G SG+++ ALQ+ +RE P VVA
Sbjct: 107 FPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASN 166
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT--YITLLRARSRYGSLHEVQQCLAVYQ 645
+ + V+S ++ A L+++M V Y T + + +L ++++ + +
Sbjct: 167 SLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKG-LCNLGKIEEGRRLVK 225
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
D W G + + +I+ +C+
Sbjct: 226 DRWGKGCVPHVVFYNMIIDGYCK 248
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 99/301 (32%), Gaps = 65/301 (21%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + SSL+ A+ + + + E M +P + + L+ A E+ DRA +LF
Sbjct: 90 DGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLF 149
Query: 457 RS---------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ ++ + G G D + K Q+ T V N S K
Sbjct: 150 HTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVK 209
Query: 508 RF-------------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
P YN+++ C D + E++ G+ P
Sbjct: 210 GLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLP 269
Query: 547 NHISWTILIDACGGSGNVEGALQIL----------------------------------- 571
++ LI+ +G E Q+L
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETM 329
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E G PD+ Y T I + R+K+A E+ K + PN +Y L+ A +
Sbjct: 330 RRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQ 389
Query: 632 G 632
G
Sbjct: 390 G 390
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 22/290 (7%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GVL DV TY+T++ + +A V M AG+ P+ +++++LI+ L +
Sbjct: 43 GVLP-DVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSK 101
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
++ LF+EML+ G P++ NIL+ + + D A R+F+ ++ L ++ T
Sbjct: 102 SLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFK-------EIVLRDEVHPAT 154
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYR 531
I + N + N +R F P TYN L+ C D R
Sbjct: 155 YNIMINGLCKNGYVGNALSLFRNL------QRHGFVPQVLTYNALINGLCKARRLKDARR 208
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V + E G PN +++T ++ C E L+IL MR G + D AY T I
Sbjct: 209 V---LKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIA 265
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++ R+++A + E M ++P+LV+Y TL+ R G L + + L
Sbjct: 266 AMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLL 315
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 168/418 (40%), Gaps = 47/418 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+ID + ++ + + ++ FN+L++ F+ L++
Sbjct: 46 PDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDL 105
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF--TYSTI 369
+ M K G+ D S+NIL+ G A ++ E+ VL+ +V TY+ +
Sbjct: 106 FDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEI-------VLRDEVHPATYNIM 158
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL + ++ G P +T+++LIN A ++ A + +E + G
Sbjct: 159 INGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGN 218
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-----------NTDR 478
EPN+ ++ C F+ + LS+ + +LG +DG T R
Sbjct: 219 EPNAVTYTTVMTCCFRCRLFEEGLEI-----LSEMR-SLGFTFDGFAYCTVIAAMIKTGR 272
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
+ E + +++ +P +YN L+ C AL +
Sbjct: 273 MQEAEEIVEMMVSS-----------------GVRPDLVSYNTLINLYCRQGRLDDALRLL 315
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+E+ GL + + TI++D +GN +GA + L M G ++VA+ + ++
Sbjct: 316 DEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKA 375
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ A LFE M+ + L RAR + + CL + +A +A
Sbjct: 376 GHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCGYQVLRATQRA 433
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A R + + PN T++ C C + + I ++RS T + +
Sbjct: 199 KARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGF 258
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +++ + ++ E+ + M GV D+ SYN L+ C G A + E+
Sbjct: 259 AYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEI 318
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
E +G L+ D +T++ IV A + A + M S G N + ++ ++
Sbjct: 319 ---EGEG-LECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGK 374
Query: 411 AGLVEQAMHLFEEM 424
AG ++ A+ LFE M
Sbjct: 375 AGHIDHALRLFEVM 388
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+++ +R +G+ P+ +++ LIDA ++ A +L M + G+ PDVV++ T I
Sbjct: 35 AIVDGIR-LGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGA 93
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
VR ++ LF+EM I P+ ++ L+ + G E +
Sbjct: 94 VRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANR 139
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 166/389 (42%), Gaps = 76/389 (19%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ + +YN L+ C AG A+E+ V ++ G+ K DV T +TIV
Sbjct: 403 VPNTVTYNCLIDGYCRAGKLETAKEV---VSRMKEDGI-KPDVVTVNTIVGGMCRHHGLN 458
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA+ DM GV N +T+ +LI+AC + +E+AMH F++ML+AGC P+++ L+
Sbjct: 459 MAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALI 518
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
CQ R + D I +E
Sbjct: 519 SGL---CQVRR-----------------------DHDAIRVVEKL--------------- 537
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ F YN+L+ C + +V ++ +M G+ P+ I++ LI
Sbjct: 538 ------REGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFF 591
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPN 617
G + E ++++ MRED + P V Y I+ L +A LF++M ++ PN
Sbjct: 592 GKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPN 651
Query: 618 LVTYITLLRARSRYG------SLHE------VQQCLAVYQDMWKAGYKAN--DTYLK--- 660
V Y L+ A S+ G SL E V+ + Y ++K + N +T LK
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMD 711
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCRRTNS 689
E++E+ CE NQ E+ + R + S
Sbjct: 712 EMVEQSCE-----PNQITMEILMERLSGS 735
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 177/415 (42%), Gaps = 42/415 (10%)
Query: 250 HLSSPN-MYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDL- 305
H SPN +++ R I +C + + A I DL L FN+L++ ++
Sbjct: 253 HGVSPNSVWLTRFI---SSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMN 309
Query: 306 --KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKL 361
+ V K M ++ + D+ + IL+ C + A +++ ++ K + V+K
Sbjct: 310 IGRMNALVLK-MDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKA 368
Query: 362 DVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
D ++T++ KV + ++ +++K + PNT+T++ LI+ AG +E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMK---MEERCVPNTVTYNCLIDGYCRAGKLETA 425
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ M + G +P+ N ++ + A F E GN
Sbjct: 426 KEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDME--------KEGVKGNVV 477
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--KPTTTTYNILMKACCT---DYYRV 532
+ H + + N H+ FDK P Y L+ C D+ +
Sbjct: 478 TYMTLIH----ACCSLSNIEKAMHW--FDKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ ++R G S + +++ +LI N E ++L M ++GM PD + Y T I
Sbjct: 532 R-VVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISF 590
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ K + + E+M+ ++ P + TY ++ A Y S+ E+ + L +++DM
Sbjct: 591 FGKHKDFESVERMMEQMREDELDPTVATYGAVIEA---YCSVGELGEALKLFKDM 642
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 35/387 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ + Y ++ Q ++ N+ +NS++ A + +EV M K GVM D +Y
Sbjct: 102 GDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 161
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E +K + + GV + DV TY++++ A K+ +
Sbjct: 162 NSIVHGFCSSGQ---PKEAIVFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ + A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337
Query: 500 SHYSS-----------------FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
S D+ T +N ++ + C + +++ L + M
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+G+ P+ I+++ LID +G ++ A ++L M GM PD V Y+T I + R+K
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRA 627
A LF EM+ + P+++TY +L+
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQG 482
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 61/400 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG--VMADMASYNIL 330
+R ++++L + + +++ +N L+N + + + LE+ M G D+ SY+ +
Sbjct: 36 ARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ G+ Y E+ L+ + + +V TY++I+ A+ A++V M+
Sbjct: 95 INGFFKEGDLDKTYSTYNEM--LDQR--ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+GV P+ +T++S+++ ++G ++A+ ++M G EP+ N L+ + +
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A ++F S T KR
Sbjct: 211 EARKIFDSMT----------------------------------------------KR-G 223
Query: 511 FKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP TTY L++ T V+ L++ M G+ PNH ++IL+ A VE A+
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + +M G N + +I+ C+
Sbjct: 344 CTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSHCK 380
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 178/418 (42%), Gaps = 20/418 (4%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F V + K+ + A+ + ++ +PN +I + G + +E +
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ +++++ L + +K D+ TYST++ + A A K+ M+S G+ P+ +T
Sbjct: 385 IESEKLF----DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S+LIN ++ A+ LF EM +G P+ NI+LQ + + A L+ T
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S Q+ L + I + K+K + F + D + + +
Sbjct: 501 KSGRQLEL-----STYNIILHGLCKNKLTDDALRMF---QNLCLMDLKLEARTFNIMIDA 552
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G +
Sbjct: 553 LLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 610
Query: 581 PDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
D ++ ++ + +A S+ +E KH+ ++ + + L + +Y H
Sbjct: 611 VDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKYQEYH 667
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 33/239 (13%)
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKT 464
E A H+F+E+L+ G P+ NILL + + A L +S +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G +G+ D+ +++ D+R S P TYN ++ A
Sbjct: 93 TVINGFFKEGDLDK------------------TYSTYNEMLDQRIS--PNVVTYNSIIAA 132
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C KA+ + M G+ P+ +++ ++ SG + A+ LK MR DG+ PD
Sbjct: 133 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 192
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
VV Y + + ++ R +A +F+ M ++P + TY TLL+ + G+L E+ L
Sbjct: 193 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 251
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + P++ T+ID + G ++ +
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S + + +++L+N +K L +++ M+ GV D+ +YNI+L+
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A+E+Y + K +L++ TY+ I+ K AL++ +++ +
Sbjct: 489 TAAAKELYVGI----TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 544
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
T++ +I+A G ++A LF G PN
Sbjct: 545 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 25/340 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ ++ G + SY ++++ + N A+ ++ ++ G +KL +++
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEK-KSGGAVKLGDRFFNS 170
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA- 427
+++ + A +Q ++KV + M GV+P+ +T++SL++ G A LF+EML
Sbjct: 171 LIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 230
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNM 482
G P++ NIL++ D F F+ + K V DG ++
Sbjct: 231 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ K + +PN PN TY L++ C D +L+ EM
Sbjct: 291 HNVVKGMVKKSPNLSPN---------------VVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I++ LI + ++ +IL+ M DG PD T IK +L
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++AFS+FE+M ++QP+ TY L+R+ + G ++
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 161/394 (40%), Gaps = 85/394 (21%)
Query: 287 VTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L FNSL+ A + +++V+K M+++GV + ++N LL G T +A+
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAK 220
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVF-----ADAKWW-------------------- 379
+++ E+ L+ GV D +T++ +++ F D +W
Sbjct: 221 QLFDEM--LDTYGVTP-DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 277
Query: 380 ----------QMALKVKEDML--SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++A V + M+ S ++PN +T+++LI + +A+ L EM+
Sbjct: 278 VDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR 337
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +PN N L+Q EA + D+ + E G+ I +
Sbjct: 338 GLKPNKITYNTLIQGLCEAQKLDKIKEIL-------------EGMVGDGGFIPD------ 378
Query: 488 QSITNTPNFVPNSH---------YSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKA 534
T T N + +H +S F+K +P + TY++L+++ C D+ R +
Sbjct: 379 ---TCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Query: 535 LMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+E + VG P ++ + + +G + A ++ + + + G + D +Y
Sbjct: 436 FFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYK 494
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
T I R + F L M P+ TY
Sbjct: 495 TLILGHCREGTPEAGFDLLVLMLRRDFVPDAETY 528
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 173/461 (37%), Gaps = 90/461 (19%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D F + +R +G +++ + K+ SP++ +++ + G ++ ++
Sbjct: 164 GDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF 223
Query: 280 ED-LRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ L + VT + Y FN L+ +N+ D F +K M + D+ +YN L+
Sbjct: 224 DEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF--FKEMSRFKCDPDVVTYNTLVDGL 281
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG +A + VK + K L +V TY+T+++ + + AL + +M+S G
Sbjct: 282 CRAGKVKIAHNV---VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRG 338
Query: 394 VTPNTITWSSLINACANA------------------------------------GLVEQA 417
+ PN IT+++LI A G +E+A
Sbjct: 339 LKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEA 398
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+FE+M + +P+S ++L+++ + F RA F L++ ++ L +
Sbjct: 399 FSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE--LAEKEILLHD------- 449
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--L 535
KP YN + + C++ KA +
Sbjct: 450 -------------------------------VGCKPLVAAYNPMFEYLCSNGKTKKAERV 478
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++ G T+++ C G E +L +M PD Y I ++
Sbjct: 479 FRQLMKRGTQDPPSYKTLILGHC-REGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLK 537
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A E+M P + ++L A G HE
Sbjct: 538 KGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHE 578
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SLI + AGL ++++ +F+ M + G P+ N LL ++ + A +LF
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD--- 224
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
E D +T P T T+NI
Sbjct: 225 ----------------------EMLDTYGVT---------------------PDTYTFNI 241
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM--RE 576
L++ C + + EM P+ +++ L+D +G V+ A ++K M +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+SP+VV YTT I+ + + +A SL EM ++PN +TY TL++ L +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ L + G+ + L LI+ C
Sbjct: 362 IKEILEGM--VGDGGFIPDTCTLNTLIKAHC 390
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 81/435 (18%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ +N + + L+ + + D +VY +++ G D+ +YN+LL A LA +
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA--LAKD 251
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Q ++ ++K K + D +TY+ +++ A+ + +M++ G+T N +
Sbjct: 252 EKACQ-VFEDMK----KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR-------- 451
+++L+ A +V++A+ +F M++ GC PN ++LL V Q R
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 452 ------------------------AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISN 481
A RLF W+ + +++ E G I
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 482 MEH----KDKQSITNTPNFVPNSHYSSFD---------------KRFSFKPTTTTYNILM 522
+E +K +T+T + N+ +S+ K+ P TYNIL+
Sbjct: 427 IEMLSKIHEKGVVTDTMMY--NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 523 KACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + RV + E+ P+ IS+ LI+ G +G+V+ A K M+E
Sbjct: 485 AS----FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++PDVV Y+T ++ +++R++ A+SLFEEM QPN+VTY LL + G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y M + G
Sbjct: 601 A---VDLYSKMKQQG 612
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 189/438 (43%), Gaps = 50/438 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG DL LR KK N + + ++ DY K+ +Y ++R L+
Sbjct: 181 FGNTEDLQMCLRLV---KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD 237
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+ +N L++ A D K +V+++M+K D +Y I+++ G E G
Sbjct: 238 IFAYNMLLDALAKDEK-ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK---CDEAVGLF 293
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +G L L+V Y+T+++V A K A++V M+ G PN T+S L+N
Sbjct: 294 NEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 411 AG---LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-RSWTLS---- 462
G ++ + + + + G + L++ + A RLF W+
Sbjct: 353 EGQLVRLDGVVEISKRYMTQGIY------SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 463 -KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ +++ E G I +E +K +T+T + N+ +S+ K
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY--NTVFSALGK---------- 454
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ L +M+ G SP+ ++ ILI + G G V+ A+ I + +
Sbjct: 455 --------LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PD+++Y + I ++ + +A F+EM+ + P++VTY TL+ +G V
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC---FGKTERV 563
Query: 638 QQCLAVYQDMWKAGYKAN 655
+ +++++M G + N
Sbjct: 564 EMAYSLFEEMLVKGCQPN 581
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 160/424 (37%), Gaps = 83/424 (19%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ KK + Y +I G G ++ ++ ++ ++ +TLN+ +N+LM
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V A + ++V+ M + G + +Y++LL G V + K +G
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG 373
Query: 358 VLKLDVFTYSTIVKV------FADAKWWQMALKVKED--------------------MLS 391
+ V T S + V F D W +K + D MLS
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCD--MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 392 ----AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
GV +T+ ++++ +A + LFE+M + G P+ NIL+ +
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A +F +
Sbjct: 492 EVDEAINIFEEL-----------------------------------------------E 504
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP +YN L+ D EM+ GL+P+ ++++ L++ G + VE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + + M G P++V Y + ++ R +A L+ +MK + P+ +TY L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 626 RARS 629
R +S
Sbjct: 625 RLQS 628
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 216 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 336 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 441
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 442 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 464
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 568
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 188/426 (44%), Gaps = 60/426 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 282
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 374
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 375 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 414
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 474
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +++P++ TY ++ + G +V+ ++ + G K N +I +C
Sbjct: 475 LQKSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 531
Query: 669 GVIQDK 674
++++
Sbjct: 532 KGLKEE 537
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 172/408 (42%), Gaps = 38/408 (9%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I FN L++ A KF L + + MQ L + D+ SYNIL+ C LA +
Sbjct: 63 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 122
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + D+ T S+++ + K A+ + + M PNT+T+++LI+
Sbjct: 123 GKMMKLGYEP----DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 178
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
+A+ L + M+ GC+P+ ++ + D A L + K
Sbjct: 179 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 238
Query: 464 -----TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NS---------HYSSFDKR 508
T + +Y D ++ D + I PN V NS +S +
Sbjct: 239 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVVTYNSLIRCLCNYGRWSDASRL 296
Query: 509 FS------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S P T++ L+ A + V+A L +EM + P+ +++ LI+
Sbjct: 297 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 356
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
++ A + ++M P+VV Y T IK ++KR+++ LF EM + N VT
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y TL++ + G Q+ +++ M G + L++ C+
Sbjct: 417 YNTLIQGLFQAGDCDMAQK---IFKKMVSDGVPPDIITYSILLDGLCK 461
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 362
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 418
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 513
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 514 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 551
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 552 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 608
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 146/364 (40%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 481
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 482 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 577
Query: 607 EEMK 610
+EM+
Sbjct: 578 KEMR 581
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 158/390 (40%), Gaps = 58/390 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDEA--------------------------------------GLKPDV 530
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ E L + +M + G++ + LI
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTASSYNALI 677
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 47/373 (12%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+SK L +A SL +EM I+P +VTY L+ G + ++ L + M +
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL---EWMLEKNIHP 598
Query: 655 NDTYLKELIEEWC 667
N T L++++C
Sbjct: 599 NTTTYNSLMKQYC 611
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Query: 515 TTTYNILMKACCTDYYRVK-----------------------------------ALMNEM 539
T +YNIL+KA CT R+K L++EM
Sbjct: 253 TCSYNILLKALCT-AGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL N +++T +I G V A+++++ M G+ D +TT + R L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A + F+EM+ + + VTY L+ R G L E ++ V Q+M G +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER---VLQEMEDKGLDVDAVTY 428
Query: 660 KELIEEWCE 668
LI+ +C+
Sbjct: 429 TVLIDGYCK 437
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 160/392 (40%), Gaps = 101/392 (25%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI------------------------ 346
V + M +LG + ++ SYNILLK C + A E+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 347 ----------YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
YG + +G+L +V TYS+I+ A+ A++V M+ GV P
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILP-NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T++S+++ ++G ++A+ ++M G EP+ N L+ + + A ++F
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S T KR KP T
Sbjct: 328 DSMT----------------------------------------------KR-GLKPEIT 340
Query: 517 TYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+ + M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS------- 453
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
L ++ D W KA D +LK IE +
Sbjct: 454 ------LCIF-DKWD---KAKDYFLKCWIEAF 475
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALG 469
+ D+A +F R L+ V G
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYG 413
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 6/241 (2%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + F K+ DL A Y PN+ +II K+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + V N +NS+++ ++ K + K M GV D+ +YN L+ C
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A++++ + K LK ++ TY T+++ +A + + M+ G+
Sbjct: 316 KNGRCTEARKMFDSM----TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +S LI A A G V+QAM +F +M Q G P++ ++ ++ + + A R
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 456 F 456
F
Sbjct: 432 F 432
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 R 451
+
Sbjct: 459 K 459
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 168/391 (42%), Gaps = 58/391 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + +R + L+ Y +N+L++ K +V+ M+ G D + N LL
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLD-- 290
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ G E G +K +E +G V TY++++ + + A ++KE+M G+
Sbjct: 291 -VYGKARRYDEAIGVLKEME-QGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI 348
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ IT+++L++ AG ++ A+ + EML+ GC+PN N L++ +F
Sbjct: 349 EPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMI 408
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F D I + F P
Sbjct: 409 VF--------------------DEI---------------------------RSAGFVPD 421
Query: 515 TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+N L+ + V + EM+ G P ++ LI + G + A++I K
Sbjct: 422 VVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYK 481
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G+ PD+ Y + R R +QA LF EM++ +P+ ++Y +LL A Y
Sbjct: 482 RMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHA---YA 538
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ + ++ +D++ ++++ +K L+
Sbjct: 539 NAKKLDKMKSLSEDIYAERIESHNGLVKTLV 569
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 199/448 (44%), Gaps = 24/448 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + V + + +A+ Y+ ++ PN+ +I + G+ G + + ++++
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDE 412
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+RS ++ +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVS-GVFKEMKKSGYVPERDTYVSLISSYSRCG 471
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A EIY K + G+ D+ TY+ ++ A W+ A K+ +M + P+
Sbjct: 472 LFDQAMEIY---KRMIEAGI-HPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDE 527
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++SSL++A ANA +++ L E++ E ++ L+ + + F
Sbjct: 528 LSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF-- 585
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHYSSFDKRFSFKPTTTT 517
L + + +L + + ++ M SI V S K S +T T
Sbjct: 586 LELRRRRCSL------DINVLNAM-----ISIYGKNGMVKKVEEILSLMKESSINLSTAT 634
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN LM + D + + ++ E+++ P+ S+ +I A G G ++ A ++ M+
Sbjct: 635 YNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK 694
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PD+V Y +K V + ++A L M + +PN TY T+L+ +G +
Sbjct: 695 CSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIA 754
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ + ++ ++ K L EL+
Sbjct: 755 DGKSFISNLPELHPGISKREQQRLLELL 782
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 203/468 (43%), Gaps = 38/468 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T++ G + Y ++ N+ +N+L+ ++ KF + V
Sbjct: 350 PDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIV 409
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 410 FDEIRSAGFVPDVVTWNTLL---AVFGQNGLDTEVSGVFKEMKKSGYVP-ERDTYVSLIS 465
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + A+++ + M+ AG+ P+ T++++++A A G EQA LF EM P
Sbjct: 466 SYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRP 525
Query: 432 NSQCCNILLQACVEACQFDR---------AFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ + LL A A + D+ A R+ L KT V + + +D
Sbjct: 526 DELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF 585
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
++ + N + N+ S + K N ++K +V+ +++ M+
Sbjct: 586 LELRRRRCSLDINVL-NAMISIYGK-----------NGMVK-------KVEEILSLMKES 626
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
++ + ++ L+ G+ E IL ++ PD +Y T I R ++K+A
Sbjct: 627 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF EMK + P++VTY +++ Y + ++ + + + M G K N+ +
Sbjct: 687 SRLFSEMKCSGLVPDIVTYNIFVKS---YVANSMFEEAIDLVRYMVTHGCKPNERTYNTI 743
Query: 663 IEEWC-EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAA 709
++E+C G I D + S+R Q LLE +A H + +
Sbjct: 744 LQEYCSHGRIADGKSFISNLPELHPGISKREQQRLLELLAKHTSRDSG 791
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 51/399 (12%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D+ +K + Y T+I C Y ++ +++++R+ + NSL++V
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKA 295
Query: 305 LKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
++ + V K M++ G + +YN L+ + G L +E + +E KG+ + D
Sbjct: 296 RRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDG---LLEEATQLKEEMEVKGI-EPD 351
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+T+V A A+ +ML G PN T+++LI G + M +F+
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
E+ AG P+ N LL G+ +G +S +
Sbjct: 412 EIRSAGFVPDVVTWNTLL-------------------------AVFGQ--NGLDTEVSGV 444
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
+ K+S +VP +R ++ ++Y + C + + + M
Sbjct: 445 FKEMKKS-----GYVP--------ERDTYVSLISSY-----SRCGLFDQAMEIYKRMIEA 486
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++ ++ A G E A ++ M PD ++Y++ + +K+L +
Sbjct: 487 GIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKM 546
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
SL E++ +I+ + TL+ S+ +L + ++
Sbjct: 547 KSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF 585
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 186/433 (42%), Gaps = 20/433 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C + F K+ + A +D K P++ +I V G+ +S ++ +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V N++ FN + + + +++ G+ D+ SYN L+ C V
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E Y H ++ + FTY+TI+ F A Q A K+ D + G P+ T+
Sbjct: 304 EA-ECY---LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SSLIN N G + +AM +F E ++ G + + N L++ + + ++ L
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG------LSKQGLVLQALQL 413
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + G D T + + K + N + N + P T+N L
Sbjct: 414 MKDMMEHGCSPDIWTYNLV-VNGLCKMGCLSDANGILNDAIAK-----GCIPDIFTFNTL 467
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C KA +++ M + G++P+ I++ L++ + ++ + K M E G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P+++ Y I+ + +++ +A LF+EMK + P++VT TL+ G L + +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 640 CLAVYQDMWKAGY 652
+ +K Y
Sbjct: 588 LFVTIEKEYKFSY 600
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 184/387 (47%), Gaps = 47/387 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHDLKF-TL 309
P+ + ++I+ G+C GD ++ A++ + + +I ++N+L+ ++ L L
Sbjct: 354 PDEFTYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ K+M + G D+ +YN+++ C G A I + AKG + D+FT++T+
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI---AKGCIP-DIFTFNTL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+++ + MLS G+TP+ IT+++L+N A ++ + F+ ML+ GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVAL-----GEDYDGNTDRISN 481
PN NIL+++ + + A LF ++ L+ V L G +G D+
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + +K + F +T +NI++ A C + + L ++M
Sbjct: 588 L-------------------FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV----CVR 595
+P++ ++ ++ID+ +GN++ A L G+ P ++TT KV CV
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP---SFTTCGKVLNCLCV- 684
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ RL +A + M I P V I
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEEVNSI 711
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 183/461 (39%), Gaps = 69/461 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASY 327
G ++ ++E + + ++ +N++MN+ F+ +VY M+ +G+ D+ ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C+ G A + + ++ +G + + +Y ++ F A + +
Sbjct: 150 TIRMKSFCITGRPTAALRL---LNNMPGQGC-EFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G+ P+ +T++ LI+ G V+++ LF ++++ G PN NI +Q
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 448 QFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNME-----HKDKQSITNTPNFVPN 499
D A RL S L+ ++ G +E HK S F N
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325
Query: 500 SHYSSF--------------DKRF-SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+ + F D F F P TY+ L+ C D R A+ E
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI------------ 590
G + I + L+ G V ALQ++K M E G SPD+ Y +
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 591 ---------KVCV--------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K C+ + + + +A + + M + I P+++TY TLL
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L V + ++ M + G N LIE +C+
Sbjct: 506 LCKARKLDNV---VDTFKAMLEKGCTPNIITYNILIESFCK 543
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 187/477 (39%), Gaps = 95/477 (19%)
Query: 282 LRSQNVTLN-IYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGN 339
+R QN LN + +FN + + K TLE YK M +KLG+ + +L +
Sbjct: 14 IRYQNDPLNALKMFNQVKTEDG--FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71
Query: 340 TVLAQEIY-GEVKHLEAKGVLK--LDVF-------------TYSTIVKVFADAKWWQMAL 383
+ + + +Y G ++ KG ++ ++VF +Y+ I+ + + ++ A
Sbjct: 72 SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCNILLQA 442
KV M G+ P+ T + + + G A+ L M GCE N+ C ++
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
E CQ + A+ LF KQ I
Sbjct: 192 YKENCQIE-AYHLFDEML--------------------------KQGIC----------- 213
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T+N L+ C + + L +++ G+ PN ++ I I
Sbjct: 214 ----------PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A ++L+ + +G++PDV++Y T I + +L +A +M + ++PN T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
Y T++ + G + + L +D G+ ++ LI G+ D + N+
Sbjct: 324 YNTIINGFCKAGMMQNADKIL---RDAMFKGFIPDEFTYSSLI----NGLCNDGDMNRAM 376
Query: 681 VTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKE 737
S++L V +GL+K + +VL L++MK+
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLV--------------KGLSK---QGLVLQALQLMKD 416
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 159/394 (40%), Gaps = 82/394 (20%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++NV + + F LM V A + + M+ D +++IL+ C
Sbjct: 120 MKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERR 179
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQE + +K + DV Y+ +V+ + A A +V +M AG+ PN
Sbjct: 180 ASQAQEFFDSLK-----DKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVY 234
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S +I++ G + +A +F EML AGC+PNS N L++ V+A + ++ +++
Sbjct: 235 TYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQM 294
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KR +P T TYN
Sbjct: 295 -----------------------------------------------KRLGCEPDTVTYN 307
Query: 520 ILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEGALQILKI 573
L++ C D + L + ++ +GL +PN ++ L G+V A ++ K
Sbjct: 308 FLIETHCKD----ENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKK 363
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+E + V Y T +K+ V SK L EM +I+PN+ TY L+ G
Sbjct: 364 MKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGH 423
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
W YK + +E+I+E C
Sbjct: 424 --------------WNNAYK----FFREMIDEKC 439
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 42/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ N VR + + ++ A R + K PN+Y +ID CG ++ I+ +
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILL-------- 331
+ N +NSLM +V A + L+VY M++LG D +YN L+
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 332 -------------KAC------------CLA--GNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K C C+A G+ A +Y ++K L + +
Sbjct: 319 LEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEA----NTV 374
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++K+F +K M LK+K +M + PN T+ LI G A F EM
Sbjct: 375 TYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREM 434
Query: 425 LQAGC-EPNSQCCNILLQACVEACQFDR 451
+ C P+ +++LQ +A Q +
Sbjct: 435 IDEKCLRPSLPVYDMVLQQLRKAGQLKK 462
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 32/357 (8%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T ++V G G ++ + D++ Q + + F ++N+ A+ +++++M+K
Sbjct: 167 TYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKA 226
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
++ +Y L+ A GN V A+EI+ E L++ G + DV+TY+ +++ ++ +
Sbjct: 227 LCPPNLYTYTALMNAHAREGNCVRAEEIFAE---LQSVGFIP-DVYTYNALLEAYSRGEH 282
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A +V + M+ AGV P+ ++++ LI+A AGL A +++ M +AG +P + +
Sbjct: 283 PTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHML 342
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDYDGNTDRISNMEHKDKQSITN 492
LL + +A + A RL R S + +L Y GN+ RI ME + +++
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAY-GNSGRIDEMESLLESMVSS 401
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
KP +T N L+ A Y KA + N + + GL+P+ +S
Sbjct: 402 VA-----------------KPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMS 444
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
WT L+ A + I + M + G PD + C +++K+ + E
Sbjct: 445 WTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSCRSPEQVKEVTDMIE 501
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 115/228 (50%), Gaps = 12/228 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K DL ++R K L PN+Y +++ G+ +++ I+ +L+S ++Y
Sbjct: 215 KADDLFRSMR------KALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVY 268
Query: 293 VFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+ + T EV++ M + GV D SYNIL+ A AG T AQ +Y +
Sbjct: 269 TYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSM 328
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K +K ++ ++ +A A A ++ ++ ++GV P+T ++SL++A N
Sbjct: 329 KEAGFKPTMK----SHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGN 384
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+G +++ L E M+ + +P+ N L+ A + ++A +F S
Sbjct: 385 SGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNS 432
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 144/362 (39%), Gaps = 57/362 (15%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVF----TYSTI 369
M+ + S+N+LL A A++++ E+K + G ++ +F TY+T
Sbjct: 109 MKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTY 168
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++V + A DM G+ P T++ +IN A ++A LF M +A C
Sbjct: 169 LEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALC 228
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ A RA +F + QS
Sbjct: 229 PPNLYTYTALMNAHAREGNCVRAEEIF----------------------------AELQS 260
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV--KALMNEMRTVGLSPN 547
+ F P TYN L++A + K + M G+ P+
Sbjct: 261 V-------------------GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPD 301
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+ ILIDA G +G A + M+E G P + ++ + ++ ++ +A L
Sbjct: 302 QVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVR 361
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
E+++ ++P+ + +LL A G + E++ L + M + K + + L LI +
Sbjct: 362 EIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLL---ESMVSSVAKPDISTLNTLINAYA 418
Query: 668 EG 669
+G
Sbjct: 419 QG 420
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 114/296 (38%), Gaps = 45/296 (15%)
Query: 379 WQMALKVKEDMLSAGV-TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
W+ + + E +L + P+ ++ LI+A + +A F M C P N
Sbjct: 63 WRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFN 122
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--------DYD------GNTDRISNME 483
+LL A Q ++A +LF S E Y+ G + R+S E
Sbjct: 123 VLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAE 182
Query: 484 HK----DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
KQ I P T+ I++ YY KA L
Sbjct: 183 DTFRDMQKQGIL---------------------PAVNTFTIMINIYGKAYYSDKADDLFR 221
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
MR PN ++T L++A GN A +I ++ G PDV Y ++ R +
Sbjct: 222 SMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGE 281
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
A +F+ M ++P+ V+Y L+ A R G + Q AVY M +AG+K
Sbjct: 282 HPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQ---AVYDSMKEAGFK 334
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 176/417 (42%), Gaps = 45/417 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+IY + L++ +H DL F+ V+ M KLG+ D ++N L+ C G A E
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFS--VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + EA G + V+TY+TI+ A + + M AG PN +T++ LI
Sbjct: 187 FFDD---FEASGC-QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
++ LV +A+ +F M P+ N L+Q ++ A L T
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302
Query: 466 VALGE-----DYDGNTDRISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
+ D ++S + K + P+ V YSS +S
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT---YSSLMYGYSLRMEIVEA 359
Query: 512 ------------KPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+K C K L NEM GL+P+++++ LI
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A + K M +G PD+ Y+ + + L +AF LF M+ ++P+
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ Y L+ A ++G+L + ++ ++ +++ G N +I C EG++ +
Sbjct: 480 IAMYNILIDAMCKFGNLKDARK---LFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 156/366 (42%), Gaps = 59/366 (16%)
Query: 345 EIYGEV----KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ YG V K +E G L D++T S ++ F+ + +A V M+ G+ P+ +T
Sbjct: 109 QYYGAVISLSKQMELAG-LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVT 167
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LIN G QA+ F++ +GC+P ++ + + A LF+
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKME 227
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ Q + Y+ D + KDK F S+ K P TYN
Sbjct: 228 EAGCQPNV-VTYNILIDSLC----KDKLVNEALDIF-------SYMKAKRISPDIFTYNS 275
Query: 521 LMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L++ C ++ R K AL+NEM ++ + PN ++ +L+DA G V A + K M E
Sbjct: 276 LIQGLC-NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334
Query: 578 GMSPDVVAYTT-----------------------------------AIKVCVRSKRLKQA 602
G+ PDVV Y++ IK ++KR+ +A
Sbjct: 335 GVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF EM H + P+ V Y TL+ + G L E Q ++++M G + L
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD---LFKNMHSNGNLPDLFTYSML 451
Query: 663 IEEWCE 668
++ +C+
Sbjct: 452 LDGFCK 457
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 179/434 (41%), Gaps = 59/434 (13%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I+ G+C G + ++ ++D + +Y + +++N +
Sbjct: 163 PDAVTFNTLIN--GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAA 220
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M++ G ++ +YNIL+ + C L E +++AK + D+FTY+++
Sbjct: 221 GLFKKMEEAGCQPNVVTYNILIDSLC---KDKLVNEALDIFSYMKAKRI-SPDIFTYNSL 276
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM----------- 418
++ + + W+ A + +M S + PN T++ L++A G V +A
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 419 ------------------------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
LF+ M+ GC+P++ NIL++ +A + D A +
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L D I + + + + N H + P
Sbjct: 397 LFNEMI----HQGLTPDNVNYNTLIHGLCQLGR--LREAQDLFKNMHSNGN------LPD 444
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY++L+ C + Y KA L M++ L P+ + ILIDA GN++ A ++
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ P+V YTT I + L +A F M+ P+ +Y ++R +Y
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYK 564
Query: 633 SLHEVQQCLAVYQD 646
Q + +D
Sbjct: 565 DESRAAQLIGEMRD 578
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 55/291 (18%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S IVK+ +++ + + + M AG++P+ T S LI+ ++ V+ A +F +M++
Sbjct: 102 SAIVKM---GQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIK 158
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G +P++ N L+ + +F +A F + S Q
Sbjct: 159 LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ--------------------- 197
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
PT TY ++ C + L +M G
Sbjct: 198 --------------------------PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGC 231
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +++ ILID+ V AL I M+ +SPD+ Y + I+ +R K+A +
Sbjct: 232 QPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASA 291
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L EM I PN+ T+ L+ A + G + E Q V++ M + G + +
Sbjct: 292 LLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ---GVFKTMTEMGVEPD 339
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 105/226 (46%), Gaps = 10/226 (4%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNI 291
+ ++V A + +DA P+ + +I G C +++ ++ ++ Q +T +
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIK--GYCKAKRIDEAKQLFNEMIHQGLTPDN 410
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L++ L+ +++KNM G + D+ +Y++LL C G A ++
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF-- 468
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ LK D+ Y+ ++ + A K+ ++ G+ PN ++++IN
Sbjct: 469 --RVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLC 526
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
GL+++A+ F M GC P+ N++++ ++ RA +L
Sbjct: 527 KEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQL 572
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 49/293 (16%)
Query: 106 KFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAP-----LEL 149
K AS L EM + I+ +I +EG++ GV K + E+GV P L
Sbjct: 287 KEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL 346
Query: 150 FDGSGFKLLKNECQRLLDS-----GEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK 204
G ++ E ++L D+ + + F +L + K +DE ++ +++
Sbjct: 347 MYGYSLRMEIVEARKLFDAMITKGCKPDAFS--YNILIKGYCKAKRIDEAKQLFNEMIHQ 404
Query: 205 ---PD---VNLAIRYACIVPR---ADILFCN---------------FVREFGKKRDLVSA 240
PD N I C + R A LF N + F K+ L A
Sbjct: 405 GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKA 464
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
R + + P++ + +ID G+ +R ++ +L Q + N+ ++ +++N
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L LE ++NM+ G D SYN++++ + A ++ GE++
Sbjct: 525 LCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 25/345 (7%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+ L A C G A+ + + L + DV TY+T++ A V
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLG----MPPDVVTYNTLLAAHCRASGLDAGFAVLH 69
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M AGV+P+ IT++SLI A GL +A+ LF+EMLQAG P++ N L+ +
Sbjct: 70 RMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSG 129
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A+R+F K Y+ D + H TN + +
Sbjct: 130 HPEDAYRVFADMA-EKGVAPCATTYNTLLDGLFRFGHA-----TNAYRMF------RYLQ 177
Query: 508 RFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R TYN ++ C Y R+ ++ E+ +PN +++T ++ C G
Sbjct: 178 RTGLPVGIVTYNTMINGLCKSGKVGYARM--VLRELGRTEHAPNVVTYTTVMKCCFKYGR 235
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L+ + E G PD+ Y T I V+ R+++A + E M + + Y T
Sbjct: 236 FDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYNT 295
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ R + G L + + L++ M + G ++++ L+ C+
Sbjct: 296 LIYLRCKEGKLDDAFELLSM---MEEGGLESDEYTFSILVNGLCK 337
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 149/371 (40%), Gaps = 24/371 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ +R V+ + +NSL+ A L+++ M + GV D SYN L+
Sbjct: 66 AVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCL 125
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G+ A ++ ++ KGV TY+T++ A ++ + G+
Sbjct: 126 FRSGHPEDAYRVFADMAE---KGVAPCAT-TYNTLLDGLFRFGHATNAYRMFRYLQRTGL 181
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+T++++IN +G V A + E+ + PN +++ C + +FD+
Sbjct: 182 PVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLE 241
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F LS + D IS + K + NT YS R F+
Sbjct: 242 TF----LSLLEGGYIPDLFPYCTVISALVKKGRMEEANT--------YSELMIRSGFRLD 289
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ YN L+ C + A L++ M GL + +++IL++ G+ E A + L
Sbjct: 290 SACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQLC 349
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M M +V+AY + +S + A L MK + TY +L+ + G
Sbjct: 350 YMEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNMK----LKDDFTYTSLVHGLCKVG 405
Query: 633 SLHEVQQCLAV 643
H + L +
Sbjct: 406 RYHMASKFLRI 416
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 352 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 457
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 458 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 480
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 188/426 (44%), Gaps = 60/426 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 298
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 390
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 391 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 430
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +++P++ TY ++ + G +V+ ++ + G K N +I +C
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 669 GVIQDK 674
++++
Sbjct: 548 KGLKEE 553
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 60/419 (14%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I FN L++ A KF L + + MQ L + D+ SYNIL+ C LA +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + D+ T S+++ + K A+ + + M PNT+T+++LI+
Sbjct: 139 GKMMKLGYEP----DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+ GC+P+ ++ + D A L + K +
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ Y D + N +++ + N ++ D + +P TYN L++ C
Sbjct: 255 V-VIYTTIIDALCNY-----KNVNDALNL-----FTEMDNK-GIRPNVVTYNSLIRCLC- 301
Query: 528 DYYR---VKALMNEMRTVGLSPNHISWTILIDACGGSGNV-------------------- 564
+Y R L+++M ++PN ++++ LIDA G +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 565 ---------------EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ A + ++M P+VV Y T IK ++KR+++ LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ N VTY TL++ + G Q+ +++ M G + L++ C+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQK---IFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 146/364 (40%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 498 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 607 EEMK 610
+EM+
Sbjct: 594 KEMR 597
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 158/390 (40%), Gaps = 58/390 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDEA--------------------------------------GLKPDV 530
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ E L + +M + G++ + LI
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTASSYNALI 677
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 47/373 (12%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+SK L +A SL +EM I+P +VTY L+ G + ++ L + M +
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL---EWMLEKNIHP 598
Query: 655 NDTYLKELIEEWC 667
N T L++++C
Sbjct: 599 NTTTYNSLMKQYC 611
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Query: 515 TTTYNILMKACCTDYYRVK-----------------------------------ALMNEM 539
T +YNIL+KA CT R+K L++EM
Sbjct: 253 TCSYNILLKALCT-AGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL N +++T +I G V A+++++ M G+ D +TT + R L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A + F+EM+ + + VTY L+ R G L E ++ V Q+M G +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER---VLQEMEDKGLDVDAVTY 428
Query: 660 KELIEEWCE 668
LI+ +C+
Sbjct: 429 TVLIDGYCK 437
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 202/454 (44%), Gaps = 38/454 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++RA+ +++ S ++ +
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS--GLCRTGRMDETRALMDEMASHSMLPD 298
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A++++
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 359 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
+V +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFD---------- 506
+S V +G + +M +KD N + +++ S D
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534
Query: 507 -KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K + TYN+L+K C + + L+ +R GL P+ +S+ +I AC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL++L+ M + G+ P + T + + R+ L+++M H ++P+ Y
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ A R + +V ++ ++M + G +DT
Sbjct: 655 MVDAYVRCENDSKVA---SLKKEMSEKGIAFDDT 685
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 193/470 (41%), Gaps = 43/470 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C +++ G + RA + L + + + +N ++ V A DL L +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 312 YKNMQKL--GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M + D SYN+++ +G A +++ E+ + GV + TY+T+
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM---GVAP-NRITYNTM 235
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + ++++ ML G PN +T++ L++ G +++ L +EM
Sbjct: 236 IDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM 295
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY----------DGNTDRI 479
P+ +IL + LF K V LG DG +
Sbjct: 296 LPDGFTYSILFDGLTRTGESQTMLSLFAESL--KKGVMLGAYTCSILLNGLCKDGKVAKA 353
Query: 480 SN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKA 524
+ H T N + N + D R +F +P TYN L+
Sbjct: 354 KQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C KA L+ EM G+ P+ ++ LIDA G +G +E +L M++ G+ D
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V+++ + +K ++ ++ +A ++ ++M + + PN Y +++ A G + +Q L
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG---DTEQALL 530
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRP 692
+ + M +G A+ L++ C D+ + E+ R RP
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE---ELIYTLRNQGLRP 577
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ N+L+++ + V+A + G P+ +W ++ AC +G+++ AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 571 LKIM-REDGMSP-DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
L+ M R +G P D +Y I RS + A +F+EM + PN +TY T++
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTN 688
+ G L + + M G K N L+ C RT
Sbjct: 240 VKGGDL---EAGFRLRDQMLHDGPKPNVVTYNVLLSGLC------------------RTG 278
Query: 689 SQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKV-EARIIVLAVLRMMKENYSLGTDEFH 747
L++++A H +I GLT+ E++ ++ +K+ LG
Sbjct: 279 RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCS 338
Query: 748 IML 750
I+L
Sbjct: 339 ILL 341
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + V+ F K + A+ D +PN + +IID GD ++ + E
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T AL++ ++M G+ P
Sbjct: 595 T---------------------------------------DKALELLQEMNKYGIRPTLR 615
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
T +L++A A+AG V L+++ML EP+S I++ A V C+ D
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR-CEND 665
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 184/427 (43%), Gaps = 50/427 (11%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+IY + V+ ++Y L+N + H + V + KLG + ++N L+
Sbjct: 125 SIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL 184
Query: 335 CLAGNTVLAQE-------------IYGEVKHLEA--------------KGVLKLD----V 363
C+ G V A E +Y + K +++LD V
Sbjct: 185 CIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEV 244
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+YS I+ + A+ + M S G++P +T++SLI N+G +QA LF+E
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML+ +P+ +IL+ A + A +F Q+A+ D + I +
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK----MIQIAMEPDIVTYSSLIHGV- 359
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
K S+ + + N S + +P T++I + C ++++N M
Sbjct: 360 --CKSSLWKESSTLLNEMLSR-----NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIE 412
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL PN +++ L+D ++ A ++ IM G +PDV++Y IK +S+R+ +
Sbjct: 413 RGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LF+EM H + PN +T+ TL+ + G + ++ +++ M G +
Sbjct: 473 AKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE---LFKKMGSHGCPPDLITYST 529
Query: 662 LIEEWCE 668
L+ +C+
Sbjct: 530 LLSGFCK 536
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 39/357 (10%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M +L ++ SY+I++ + C L E H+ + G+ V TY++++
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLC---KNRLVNEAVDLFYHMRSIGI-SPTVVTYNSLIYG 288
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ W+ A + ++ML + P+ +T+S L++A G+V +A+ +F +M+Q EP+
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Query: 433 SQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ L+ ++ + + L R+ ++ D +S +
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS-----EA 403
Query: 488 QSITNT-------PNFVP----------NSHYSSFDKRFSF------KPTTTTYNILMKA 524
QSI N PN V +S K F P +YNIL+K
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463
Query: 525 CCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L +EM GL+PN I+ T LI +G A ++ K M G PD
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ Y+T + + L +A +LFE +K Q++PN V LL + G L + ++
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 150/351 (42%), Gaps = 35/351 (9%)
Query: 262 IIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
IID +C + + + A+ + +RS ++ + +NSL+ N+ K ++K M +
Sbjct: 250 IID--SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ D+ +++IL+ A C G + A ++G++ + ++ D+ TYS+++ +
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI----AMEPDIVTYSSLIHGVCKSS 363
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
W+ + + +MLS + P+ +T+S ++ G+V +A + M++ G PN N
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423
Query: 438 ILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHK 485
L+ Q D A ++F S+ + E D M HK
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 486 D--KQSITNTPNFV-------PNSHYSSFDKRFSF--KPTTTTYNILMKACCTDYY--RV 532
SIT+T P + F K S P TY+ L+ C +
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
AL ++ L PNH+ IL+ +G +E A ++ + + + PDV
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 12/249 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIY 279
+ F V K+ ++ AL + + P++ ++I G+C + +S +
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIH--GVCKSSLWKESSTLL 372
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S+N+ ++ F+ ++V + + M + G+ ++ +YN L+ CL
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A++++ + + KG DV +Y+ ++K + ++ A ++ ++M G+TPN
Sbjct: 433 SQMDEARKVFDIMVN---KGCAP-DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT ++LI+ AG A LF++M GC P+ + LL + D A LF
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 458 SWTLSKTQV 466
+ L K+Q+
Sbjct: 549 A--LKKSQL 555
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ F +V F KK + A + + PN+ +++D + ++R
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ + ++ ++ +N L+ + + +++ M G+ + ++ L+ C
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+E++ K + + G D+ TYST++ F AL + E + + +
Sbjct: 501 QAGRPYAAKELF---KKMGSHGCPP-DLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
PN + L+ AG +E A LF + +P+
Sbjct: 557 PNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 87/412 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS-EVLR 316
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+++G++ D SYNIL++ C G N
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 377 KIEAAEIL--IREIREKGIV-LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S P TYN
Sbjct: 494 DM-----------------------------------------------MSINPDDVTYN 506
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 197/478 (41%), Gaps = 47/478 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + R + A+ + K+ P C I+ + +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV + LK M+ G+ + +YN L++ L
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 273 RGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVP 325
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 457 RSWTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSF---- 505
R S T L Y + D D+ T P Y+S
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM---TDGIQPTQFTYTSLIYVL 442
Query: 506 ---------DKRF------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
D+ F KP N LM C + R +L+ EM + ++P+
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ L+ G G E A +++ M+ G+ PD ++Y T I + K AF + +E
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 609 MKHYQIQPNLVTYITLLR--ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
M P L+TY LL+ ++++ G L E + ++M G ND+ +IE
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAE-----ELLREMKSEGIVPNDSSFCSVIE 615
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 159/374 (42%), Gaps = 62/374 (16%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M ++ + +++ ++NI++ C G A+ G +E G+ K + TY+T+V+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG---IMEVFGI-KPTIVTYNTLVQ 268
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ + A + +M S G P+ T++ +++ N G +A + EM + G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVP 325
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S NIL++ C + AF +R + + V
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFA-YRDEMVKQGMV------------------------- 359
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
PT TYN L+ + +++A L+ E+R G+ +
Sbjct: 360 ---------------------PTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDS 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ILI+ G+ + A + M DG+ P YT+ I V R + ++A LFE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+ ++P+LV TL+ G++ + ++ ++M +D L+ C
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNM---DRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 668 EGVIQDKNQNQGEV 681
EG ++ + GE+
Sbjct: 515 EGKFEEARELMGEM 528
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 43/304 (14%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T +TI + L+ C +V++A+ F M + G P ++ CN +L R R
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL------LSRLNR 205
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQS-----ITNTPNFVPN-SHY 502
+ +W + + N + M E K K++ I P Y
Sbjct: 206 IENAWVFYADMYRM--EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 503 SSFDKRFS-------------------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
++ + FS F+P TYN ++ C + R ++ EM+ +G
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG-RASEVLREMKEIG 322
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ +S+ ILI C +G++E A M + GM P Y T I +++ A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L E++ I + VTY L+ ++G + ++ A++ +M G + LI
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 664 EEWC 667
C
Sbjct: 440 YVLC 443
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ ++ + +N LM + KF E+
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL----LTYNALLK 580
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++A ++ +M S G+ PN ++ S+I A +N
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 161/404 (39%), Gaps = 69/404 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++R V N+Y +N L+ + + ++ M + G D S+ ++ C
Sbjct: 91 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 150
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGV 394
G A+ E ++A +Y+ +V + + W++ V +M+ G+
Sbjct: 151 KLGRVEEARGFLAETVPVQA---------SYNAVVHALCGEFRMWEV-FSVVNEMVQRGL 200
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++++++A A + A + M+ GC PN
Sbjct: 201 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN---------------------- 238
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ T + G DG +M H + P+
Sbjct: 239 -----VLTFTALVKGFFEDGKVHDALSMWHWMVDE--------------------GWAPS 273
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +YN+L++ C D N M+ L PN +++ L+D +G+++GA+ I
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G P+VV YT I V + QA SL ++M PN VT+ TL+ R
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI---GRLC 390
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
V + L V+ M + G ND EL+ G+ ++ N
Sbjct: 391 DCGRVGRALNVFHGMRRNGCHPNDRTYNELL----HGLFREGNH 430
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 32/384 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ TI+D + + AI + S T N+ F +L+ D K L +
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G SYN+L++ C G+ A + + +K + L + TYST+V
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK----RNALLPNATTYSTLVD 317
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++A A+ + +M S+G PN + ++++I+ + +QA L ++ML C P
Sbjct: 318 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 377
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSI 490
N+ N L+ + + RA +F + DR N + H
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH---------PNDRTYNELLHGL---- 424
Query: 491 TNTPNFVPNSHYSSFDKRF-----SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F +H +F F+ + TYN ++ C R A L+ M G
Sbjct: 425 -----FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 479
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ +I A G V A +L M +VVAYT I +L A
Sbjct: 480 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 539
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
+M + I PN T+ L+RA
Sbjct: 540 VYLLKMLYEGICPNEATWNVLVRA 563
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 22/297 (7%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V ++M AGV PN T++ LI A V+ A + +EM + GC P+ ++
Sbjct: 89 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 148
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + + A R F + T V + Y+ + E + + + V
Sbjct: 149 MCKLGRVEEA-RGFLAET-----VPVQASYNAVVHALCG-EFRMWEVFSVVNEMV----- 196
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+ +P TY ++ A C + A++ M ++G +PN +++T L+
Sbjct: 197 -----QRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFE 251
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V AL + M ++G +P ++Y I+ LK A F MK + PN T
Sbjct: 252 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 311
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
Y TL+ S G L + ++ +M +G K N +I+ C+ ++ D+ ++
Sbjct: 312 YSTLVDGFSNAGDL---DGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 365
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
++P A + V F DL A+ ++ K PN+ + +IDV +C M
Sbjct: 305 LLPNATT-YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV--LCKKMMFD 361
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++ + + N N FN+L+ + + L V+ M++ G + +YN LL
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN ++ + V + G +L + TY+T++ + A+ + M+
Sbjct: 422 HGLFREGNH---KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 477
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ P+ T++++I+A G V A L +M C N IL+
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 526
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 36/194 (18%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN L+ A + V + + MR G+ PN ++ +LI A + V+ A ++
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---------------------------- 602
L M G PD V++ T + + R+++A
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186
Query: 603 --FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
FS+ EM +QPN+VTY T++ A + E++ A+ M G N
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDA---FCKARELRMACAILARMVSMGCTPNVLTFT 243
Query: 661 ELIEEWCE-GVIQD 673
L++ + E G + D
Sbjct: 244 ALVKGFFEDGKVHD 257
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 184/430 (42%), Gaps = 45/430 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN T+ID G G + ++ ++ N+Y +NS++ + + ++V
Sbjct: 389 PNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV 448
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G + A++N +L C G ++ E+K+ + D T++T++
Sbjct: 449 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG----FEPDKDTFNTLIS 504
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + K+ +M+ +G TP T+++L+NA A G + A + ++M G +P
Sbjct: 505 AYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKP 564
Query: 432 NSQCCNILLQACVEACQFDRAFRL---------FRSWTLSKTQVALGEDYDGNTDRISNM 482
N ++LL +A ++ F SW L +T V + M
Sbjct: 565 NENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNH----KCRHLRGM 620
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
E +FD+ ++ +KP N ++ + + + + +++
Sbjct: 621 ER-------------------AFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHF 661
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ GL PN ++ L+D G A ++LK ++ G PDVV+Y T IK R
Sbjct: 662 IHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGL 721
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+++A + EM IQP +VTY T L S Y + + V + M + + ++
Sbjct: 722 MQEAIGVLSEMTTKGIQPTIVTYNTFL---SGYAGMELFDEANEVIRFMIEHNCRPSELT 778
Query: 659 LKELIEEWCE 668
K L++ +C+
Sbjct: 779 YKILVDGYCK 788
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 170/403 (42%), Gaps = 66/403 (16%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D+ +Y +L + G A +++G++K + L + TY+ ++ V+ + W
Sbjct: 214 DVRAYTTILHSYARTGKYKRAIDLFGKMKEIG----LDPTLVTYNVMLDVYGKMGRSWDR 269
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
L++ ++M S G+ + T S++I+AC G++++A E+ G +P + N +LQ
Sbjct: 270 ILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQ 329
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + A + + E +D N P
Sbjct: 330 VFGKAGIYTEALSILK-------------------------EMED----NNCP------- 353
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILI 555
P + TYN L Y R A+++ M + G+ PN I++T +I
Sbjct: 354 -----------PDSVTYNEL----AATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA G +G + AL++ +M++ G +P+V Y + + + + R + + EMK
Sbjct: 399 DAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 458
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDK 674
PN T+ T+L S G + V + L ++M G++ + LI + G D
Sbjct: 459 PNRATWNTMLAVCSEEGKHNYVNKVL---REMKNCGFEPDKDTFNTLISAYARCGSEVDS 515
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
+ GE+ T + LL +A AAE++ D+R
Sbjct: 516 AKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMR 558
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 190/435 (43%), Gaps = 65/435 (14%)
Query: 254 PNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD------LK 306
P + ++DV G G + + + +++RS+ + L+ + +++++ + K
Sbjct: 248 PTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARK 307
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F E+ N K G + +YN +L+ AG A I +K +E D TY
Sbjct: 308 FLAELKFNGYKPGTV----TYNSMLQVFGKAGIYTEALSI---LKEMEDNNCPP-DSVTY 359
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + + A + + V + M S GV PN IT++++I+A AG + A+ LF M
Sbjct: 360 NELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKD 419
Query: 427 AGCEPNSQCCN-----------------ILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
GC PN N +L + + C +RA +W T +A+
Sbjct: 420 LGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRA-----TWN---TMLAVC 471
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPT 514
+ +G + ++ + + K N+ S++ + + F P
Sbjct: 472 SE-EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TTYN L+ A D+ ++++ +MRT G PN S+++L+ +GNV+G ++ K
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR--ARSR 630
+ + + P + T + + + L+ F++++ Y +P+LV ++L AR++
Sbjct: 591 EIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNK 650
Query: 631 YGS-----LHEVQQC 640
S LH + +C
Sbjct: 651 MFSKAREMLHFIHEC 665
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL V K R L RA+D +K+ P++ + +++ + + K+R +
Sbjct: 602 ILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHF 661
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N++ +N LM+ V + EV K +Q G D+ SYN ++K C G
Sbjct: 662 IHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKG- 720
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE G + + KG+ + + TY+T + +A + + A +V M+ P+ +
Sbjct: 721 --LMQEAIGVLSEMTTKGI-QPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL 777
Query: 400 TWSSLINACANAGLVEQAM 418
T+ L++ AG E+AM
Sbjct: 778 TYKILVDGYCKAGKYEEAM 796
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ + RT++ C ++ L+ ++ V NS++++ A + F+ E+
Sbjct: 599 PSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREM 658
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + G+ ++ +YN L+ G A+E+ +K ++ G + DV +Y+T++K
Sbjct: 659 LHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEV---LKGIQNSGP-EPDVVSYNTVIK 714
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A+ V +M + G+ P +T+++ ++ A L ++A + M++ C P
Sbjct: 715 GFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRP 774
Query: 432 NSQCCNILLQACVEACQFDRA 452
+ IL+ +A +++ A
Sbjct: 775 SELTYKILVDGYCKAGKYEEA 795
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ ++ + S DV AYTT + R+ + K+A LF +MK + P LVTY +L
Sbjct: 199 ASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLD 258
Query: 627 ARSRYG 632
+ G
Sbjct: 259 VYGKMG 264
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 169/403 (41%), Gaps = 67/403 (16%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNM 315
+Y +++ + C + + M + +R+ N+ L + + +MN EVY+ M
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNK-------AQEVYETM 265
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+M + ++N +L +C AG+ +I+ E+K + ++ TY+ ++ F+
Sbjct: 266 VMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK----RRNIEFSEVTYNILINGFSK 321
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ + A + DM +G +++ LI GL ++A + +EML AG P +
Sbjct: 322 SGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTST 381
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
NI ++A E + D A L S
Sbjct: 382 YNIYIRALCEFGRIDDARELLSSMA----------------------------------- 406
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
P +YN LM V+A L ++++ ++P+ +++
Sbjct: 407 ----------------APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID SGN+EGA ++ + M + PDV+ YTT +K V++ L A +++EM
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
I+P+ Y T R G + ++ ++++M + A D
Sbjct: 511 IKPDGYAYTTRTVGELRLG---DSEKAFRLHEEMVAEDHHAPD 550
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 193/480 (40%), Gaps = 54/480 (11%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V R R + A Y+ H P + T++D C GD + I+ +++
Sbjct: 242 CNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 301
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+N+ + +N L+N + ++ + +MQ+ G S+N L++ C G
Sbjct: 302 RRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQG--- 358
Query: 342 LAQEIYGEVKHLEAKGVLKL------------------------------DVFTYSTIVK 371
L E +G + G+ DV +Y+T++
Sbjct: 359 LFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMH 418
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + A + +D+ + + P+ +T+++LI+ +G +E A L EEM P
Sbjct: 419 GYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYP 478
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD-KQSI 490
+ LL+ V+ A ++ L K G Y T + + D +++
Sbjct: 479 DVITYTTLLKGFVKNGNLSMATEIYDE-MLRKGIKPDGYAYTTRT--VGELRLGDSEKAF 535
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
V H++ P T YN+ + C KA+ ++ VGL P+H
Sbjct: 536 RLHEEMVAEDHHA---------PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDH 586
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T +I G + A + M +SP V+ Y I ++ RL+QAF E
Sbjct: 587 VTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTE 646
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
MK ++PN++T+ LL + G++ E + L M + G N LI + C+
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC---KMEEEGISPNKYSYTILISKHCD 703
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 197/447 (44%), Gaps = 45/447 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C ++ V K++ +YE + + + FN++++ A DL+ ++
Sbjct: 237 PSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKI 296
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + +YNIL+ +G A+ +G+++ + + ++++ +++
Sbjct: 297 WLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQ----RSGFPVTPYSFNPLIE 352
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A V ++ML+AG+ P T T++ I A G ++ A E+L + P
Sbjct: 353 GYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA----RELLSSMAAP 408
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNME--HKD 486
+ N L+ ++ +F A LF ++ ++ + V DG + N+E +
Sbjct: 409 DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCES-GNLEGAQRL 467
Query: 487 KQSITNT---PN----------FVPNSHYSS----FDK--RFSFKP-----TTTTYNILM 522
K+ +T+ P+ FV N + S +D+ R KP TT T L
Sbjct: 468 KEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELR 527
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+R+ M + +P+ + + ID GN+E A++ + + G+ PD
Sbjct: 528 LGDSEKAFRLHEEM--VAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPD 585
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V YTT I+ + R K A L++EM ++ P+++TY L+ ++ G L +Q
Sbjct: 586 HVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRL---EQAFQ 642
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCEG 669
+M K G + N L+ C+
Sbjct: 643 YSTEMKKRGVRPNVMTHNALLHGMCKA 669
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ + I++ S + A ++ + M G+ P V+ + T + C ++ L++
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ EMK I+ + VTY L+ S+ G + E ++ + DM ++G+ L
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARR---FHGDMQRSGFPVTPYSFNPL 350
Query: 663 IEEWCEGVIQDK 674
IE +C+ + D+
Sbjct: 351 IEGYCKQGLFDE 362
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 171/406 (42%), Gaps = 51/406 (12%)
Query: 290 NIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N Y FN L++ + L L MQ G+ D +YN LL A C G +
Sbjct: 208 NHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKG-------ML 260
Query: 348 GEVKHLEAK----GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
GE + L A+ G++ TY+T+V +A W + A V E M + G P+ T++
Sbjct: 261 GEARTLLARMKKEGIVPTRA-TYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319
Query: 404 LINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLF------ 456
L AG V++A L +EM Q G P+ N L+ AC + + A L
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379
Query: 457 --RSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+S ++ + G +G + + +E ++ +T P
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT---------------------P 418
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ A C KA LM+EM GL + + L+ E A ++L
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + G PD V+Y T + + + + A L++EM ++ P++ TY TL++ S
Sbjct: 479 RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTM 538
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
G L E L ++ + G +DT +I +C EG ++ Q
Sbjct: 539 GKLTEAIDKL---NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 190/442 (42%), Gaps = 57/442 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++R + ++ + + +N+L++ A +K +
Sbjct: 241 SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATD 300
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST-- 368
V + M G D+ +YN+L C AG A ++ E++ L G++ DV TY+T
Sbjct: 301 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL---GIVSPDVVTYNTLV 357
Query: 369 ---------------------------------IVKVFADAKWWQMALKVKEDMLSAGVT 395
IVK + AL E M G+T
Sbjct: 358 DACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT 417
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ IT+++LI+A AG V +A L +EM+++G + ++ N LL + +++ A L
Sbjct: 418 PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 477
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R+ + E G E+K + ++ + KR P+
Sbjct: 478 LRAP--PQRGFVPDEVSYGTVMAAYFKEYKPEPAL---------CLWDEMIKR-KLTPSI 525
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+TYN L+K T +A+ +NE+ +GL P+ ++ I+I A G++E A Q
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNK 585
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E+ PDVV T + RL++A LFE + +++TY TL++A +
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKD-- 643
Query: 634 LHEVQQCLAVYQDMWKAGYKAN 655
++V L + DM G + +
Sbjct: 644 -NDVDTALRFFADMEVRGLQPD 664
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 132/330 (40%), Gaps = 55/330 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID G+ K+ + +++ + ++ + N+L+ + ++ E
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + + G + D SY ++ A A ++ E+ K L + TY+T++
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM----IKRKLTPSISTYNTLI 532
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+ +++ G+ P+ T++ +I+A G +E+A +M++ +
Sbjct: 533 KGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFK 592
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ CN L+ + ++A +LF SW V G+ D
Sbjct: 593 PDVVTCNTLMNGLCLYGRLEKAMKLFESW------VEKGKKVD----------------- 629
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
TYN L++A C D AL +M GL P+
Sbjct: 630 ------------------------VITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDG 578
++ +L+ A +G A ++L + E G
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
++ +P+ P + +F + + P T+N+L+ C+ AL +++M+ GL
Sbjct: 181 ALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGL 240
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+++G+ P Y T + R +KQA
Sbjct: 241 SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATD 300
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M + +P+L TY L + G + E
Sbjct: 301 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF +R +P+ N ++ A T + + + L PNH ++ +L+
Sbjct: 161 SFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHC 220
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 221 SKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRA 280
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY TL+ A +R G ++Q V + M G++ +
Sbjct: 281 TYNTLVSAYARLGW---IKQATDVVEAMTAFGFEPD 313
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D + + + K+ DL A + ++ ++ P++ C T+++ + G K+
Sbjct: 556 LVPD-DTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKA 614
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++E + +++ +N+L+ +D+ L + +M+ G+ D+ +YN+LL A
Sbjct: 615 MKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSA 674
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG +V AQ++ + L G L F Y +I K +A +VK D+ S G
Sbjct: 675 LSEAGRSVEAQKM---LHKLNESGKL-YGRFFYPSI-KSSVEAVETGKDPEVKSDIESVG 729
Query: 394 VT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
T + +++ I G +++A + +EM+Q G ++ L++ ++
Sbjct: 730 NTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 219/505 (43%), Gaps = 55/505 (10%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E ++++Q V P C++ AD+ V+ GK + + AL + K
Sbjct: 113 EMWKMIQEMVRSP--------TCVIGPADL--SEVVKILGKAKMVNKALSVFYQIKSRKC 162
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN------VTLNIYVFNSLMNVNAHDLK 306
P ++I + G + K +Y ++ ++ +T ++ V ++ + + D
Sbjct: 163 KPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLV-SAFVKLGRDD-- 219
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + ++ M+ G+ Y LL +G+ ++ G V+ ++ KG VFTY
Sbjct: 220 YAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD----EKALGLVQEMKDKGCAPT-VFTY 274
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K + + A V +ML G P+ + ++LIN AG +E A+ LF++M
Sbjct: 275 TELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRS 334
Query: 427 AGCEPNSQCCNILLQACVE----ACQFDRAFRLFRSWTLSKTQVALGEDYDG--NTDRIS 480
C PN N +++A E A + F ++ ++ + DG T+R+
Sbjct: 335 LKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVE 394
Query: 481 N----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
+E D++ P S ++ K ++ + L + C R+ A+M
Sbjct: 395 KALLLLEEMDEKGFPPCPAAY-CSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453
Query: 537 -----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
NEM+ +G +P+ ++ L+ +G +E A L+ M E+G
Sbjct: 454 IKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGC 513
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PD+ ++ + R+ R +QA +F +MK I+P+ V+Y T+L + SR G E +
Sbjct: 514 TPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAK 573
Query: 640 CLAVYQDMWKAGYKANDTYLKELIE 664
+ ++M G++ + ++E
Sbjct: 574 LM---REMGSRGFEYDHITYSSILE 595
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 179/408 (43%), Gaps = 52/408 (12%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R +D K + P I T++ + GD K+ + ++++ + ++ + L+
Sbjct: 221 AIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDE-KALGLVQEMKDKGCAPTVFTYTELIK 279
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ ++ V+ NM K G D+ N L+ AG A +++ +++ L+
Sbjct: 280 GLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAP 339
Query: 358 VLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+V TY+T++K ++K W+ E M + GVTP++ T+S LI+
Sbjct: 340 ----NVVTYNTVIKALFESKAPASEAASWF-------EKMKANGVTPSSFTYSILIDGFC 388
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
VE+A+ L EEM + G P L+ A +A +++ A LF + L
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF---------LELK 439
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCT 527
E+ ++ RI + K+ P+ F+ K+ P YN LM
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGR-----PSEAVDLFNEMKKIGCNPDVYAYNALMSGL-- 492
Query: 528 DYYRVKALMNE-----MRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
V+A M E +RT+ G +P+ S I+++ +G E A ++ M++ +
Sbjct: 493 ----VRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLI 548
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
PD V+Y T + RS ++A L EM + + +TY ++L A
Sbjct: 549 KPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 122/308 (39%), Gaps = 59/308 (19%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +VK+ AK AL V + S P T++S+I G E+ L+ EM
Sbjct: 135 SEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCN 194
Query: 427 AG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G C P++ ++L+ A V+ + D A RLF
Sbjct: 195 EGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEM-------------------------- 228
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR-----VKALMNEMR 540
K PT Y L+ Y++ L+ EM+
Sbjct: 229 ---------------------KANGLHPTAKIYTTLLAI----YFKSGDEKALGLVQEMK 263
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P ++T LI G SG VE A + M +DG PDVV I + ++ RL+
Sbjct: 264 DKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLE 323
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
A LF++M+ + PN+VTY T+++A + S + + ++ M G +
Sbjct: 324 DALKLFDQMRSLKCAPNVVTYNTVIKA--LFESKAPASEAASWFEKMKANGVTPSSFTYS 381
Query: 661 ELIEEWCE 668
LI+ +C+
Sbjct: 382 ILIDGFCK 389
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + +A + K++ + I +I G CG ++
Sbjct: 409 PPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVD 468
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +++ ++Y +N+LM+ V A ++ + M++ G D+ S+NI+L
Sbjct: 469 LFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLA 528
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E++ ++K ++K D +Y+TI+ + + ++ A K+ +M S G
Sbjct: 529 RTGRPEQATEMFMKMKD----SLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFE 584
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 585 YDHITYSSILEA 596
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 17/336 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYS 367
L +K Q+ G SY I+L+ N +A+ ++ KH +KG +KL+ ++
Sbjct: 95 LRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKH--SKGTVKLEDRFFN 152
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++++ +A+A ++ ++K+ + M S V+P+ +T++SL++ G A +++EML
Sbjct: 153 SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212
Query: 428 -GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ N+L++ + D FR FR E ++ + D ++ D
Sbjct: 213 YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREM----------ESFNCDADVVTYNTLVD 262
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
N K P TY L++ C +AL + EM + GL
Sbjct: 263 GLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL 322
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN I++ L+ + ++ +L+ M+ D G SPD + T I + + L +A
Sbjct: 323 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+FE MK ++I + +Y TL+R+ + G +Q
Sbjct: 383 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQ 418
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 178/429 (41%), Gaps = 63/429 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNM-QKLGVMADMAS 326
G + +S +++ ++S V+ ++ FNSLM++ + + EVY M GV D +
Sbjct: 162 GLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCT 221
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN+L++ C + E + + +E+ DV TY+T+V A ++A +
Sbjct: 222 YNVLIRGFC---KNSMVDEGFRFFREMESFNC-DADVVTYNTLVDGLCRAGKVRIARNLV 277
Query: 387 EDMLSA--GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
M G+ PN +T+++LI VE+A+ + EEM G +PN N L++
Sbjct: 278 NGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLC 337
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
EA + D+ + K+ D T T N + + H +
Sbjct: 338 EAHKLDKMKDVLERM---KSDGGFSPD-------------------TFTFNTIIHLHCCA 375
Query: 505 FD-----------KRFSFKPTTTTYNILMKACCT--DYYRVKALMNE-------MRTVGL 544
+ K+F + +Y+ L+++ C DY + L +E + G
Sbjct: 376 GNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGS 435
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P S+ + ++ G + A ++++ + + G + D +YTT I + + +
Sbjct: 436 KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYE 494
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKAN----DTY 658
L M P++ Y L+ G L + + LA + M K+ Y+ +
Sbjct: 495 LLMWMLRRDFLPDIEIYDYLID-----GFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSV 549
Query: 659 LKELIEEWC 667
L +L+E+ C
Sbjct: 550 LAKLLEKGC 558
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 53/262 (20%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SLI + A AGL +++M LF+ M P+ N L+ +
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILL---------------- 194
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
K+ TN V Y + P T TYN+
Sbjct: 195 --------------------------KRGRTNMAKEV----YDEMLGTYGVSPDTCTYNV 224
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
L++ C + + EM + + +++ L+D +G V A ++ M +
Sbjct: 225 LIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKC 284
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G++P+VV YTT I+ + +++A + EEM ++PN++TY TL++ H+
Sbjct: 285 EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKG---LCEAHK 341
Query: 637 VQQCLAVYQDMWKAGYKANDTY 658
+ + V + M G + DT+
Sbjct: 342 LDKMKDVLERMKSDGGFSPDTF 363
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 507 KRFSFKPTTTTYN----ILMKACCTDYYRVKALMNEM-RTVGLSPNHISWTILIDACGGS 561
K + P+ T+N IL+K T+ K + +EM T G+SP+ ++ +LI +
Sbjct: 175 KSIAVSPSVVTFNSLMSILLKRGRTNM--AKEVYDEMLGTYGVSPDTCTYNVLIRGFCKN 232
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLV 619
V+ + + M DVV Y T + R+ +++ A +L M K + PN+V
Sbjct: 233 SMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVV 292
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
TY TL+R Y EV++ L V ++M G K N L++ CE DK
Sbjct: 293 TYTTLIRG---YCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDK 344
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 188/432 (43%), Gaps = 31/432 (7%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
++ F ++ + A+ +DA KK P+ + ++D G+C GD + + ++
Sbjct: 288 IQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVD--GLCKQGDVLTGYDLLVEMARN 345
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ + ++SL++ A ++ E+++ +++ G D Y+I+L CC N +
Sbjct: 346 GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVV 405
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ ++ H D + Y++++ F + AL V E ML +GV+PN +T +
Sbjct: 406 CDLWNDMVHHN----FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ ++++A ++ Q G PN +++ + + D + +F
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFAD----- 516
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNIL 521
+ Y +T S + +++ +P + + F K KP TY L
Sbjct: 517 ---MIKRGYVPDTVVYSIIIDSFVKALK-----LPEA-FRLFHKMLDEGTKPNVFTYTSL 567
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D V L M GL+P+ I +T LI N++ AL+I + M + G+
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
S D YT I + + A L EEM + + P++VTY L+ + G +
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANM 687
Query: 640 CLAVYQDMWKAG 651
Y M +AG
Sbjct: 688 ---TYNSMLQAG 696
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 172/423 (40%), Gaps = 36/423 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL----EVYKNMQKLGVMADMASYNIL 330
+R++++D++S + N+Y ++ LM+ H + L E+ M+ GV + A+Y
Sbjct: 193 ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L T + ++ L +G + + ++ +++ F Q A++V + M
Sbjct: 253 LYG---LSRTRQVASAWNFLQMLCQRGN-PCNTYCFNAVIQGFCREGQVQEAIEVFDAMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T ++S L++ G V L EM + G P + LL A + +
Sbjct: 309 KGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVE 368
Query: 451 RAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD 506
AF LFR + +G ++ D + NFVP+++ Y+S
Sbjct: 369 LAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLI 428
Query: 507 KRF-------------------SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
F P T IL+ + +A + +++R G+
Sbjct: 429 YAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIV 488
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + ++I+ + I M + G PD V Y+ I V++ +L +AF L
Sbjct: 489 PNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRL 548
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M +PN+ TY +L+ L EV + +++ M G + LI
Sbjct: 549 FHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV---VTLFKHMIWEGLTPDRILYTSLIVC 605
Query: 666 WCE 668
+C+
Sbjct: 606 YCK 608
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + N++ + SL+N HD L + ++K+M G+ D Y L+ C
Sbjct: 548 LFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYC 607
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N A EI+ + L L D F Y+ ++ F+ A + E+M + G+T
Sbjct: 608 KRSNMKAALEIFRGMGKLG----LSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLT 663
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
P+ +T+++LI G +A + MLQAG P+++ IL
Sbjct: 664 PSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 45/324 (13%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G + +L ++ G+AP + S LL C+ +G+VE+ L LEE
Sbjct: 328 KQGDVLTGYDLLVEMARNGIAPTLV---SYSSLLHGLCR----AGKVELAFELFRRLEE- 379
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE----------FGKK 234
+ + + + +N +L I C + D++ NFV + F +
Sbjct: 380 ----QGFKHDHIVYSIILNGCCQHLNIEVVCDLWN-DMVHHNFVPDAYNYTSLIYAFCRH 434
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE------DLRSQNVT 288
R+L AL ++ SPN+ C ++D G K R I E +R +
Sbjct: 435 RNLTDALGVFELMLDSGVSPNVVTCTILVDGFG------KERMIDEAFLFLHKVRQFGIV 488
Query: 289 LNI----YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ + N L VN D ++ +M K G + D Y+I++ + A A
Sbjct: 489 PNLCMYRVIINGLCKVNKSD--HVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAF 546
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ H K +VFTY++++ + + + M+ G+TP+ I ++SL
Sbjct: 547 RLF----HKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602
Query: 405 INACANAGLVEQAMHLFEEMLQAG 428
I ++ A+ +F M + G
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLG 626
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 159/354 (44%), Gaps = 23/354 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + + NV + FN+L+N A +K + M++ G +SYN L+K
Sbjct: 47 LLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYG 106
Query: 336 LAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L G A ++ E+ AK V K + T++ ++K +A K + A V M +AGV
Sbjct: 107 LDGQPEEAMKLLQEM----AKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGV 162
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +++++L A G A ++ EM PN + I++ + A Q D + R
Sbjct: 163 GPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLR 222
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ-SITNTPNFVPNSHYSSFDKRFSFKP 513
L + DG + I+ H K S + P+ V + F KP
Sbjct: 223 LIERMKM-----------DGISPTIAVFNHLVKGYSESMKPHKV--DKVFKLMENFGVKP 269
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+ ++M A C+ KA++ M+ L P+ ++++IL+ G E L
Sbjct: 270 DVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFL 329
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
IM ++ + P+V+ YTT I ++ A +F+EM+ + PN+ T+ TL+
Sbjct: 330 NIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLI 383
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M V P+ I +++L+N AG +++A L EM + GC + N L++
Sbjct: 49 QQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLD 108
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q + A +L + + +D + DR NM K + + N + S
Sbjct: 109 GQPEEAMKLLQE---------MAKDVNSKPNDRTFNMLIK---AWAHDKNPEKARNVISM 156
Query: 506 DKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ P +YN L + A + + ++ EM+ V L PN ++ I+I+ +G
Sbjct: 157 MRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQ 216
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +L++++ M+ DG+SP + + +K S + + +F+ M+++ ++P++ T+
Sbjct: 217 IDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGL 276
Query: 624 LLRARSRYGSLHEVQQCL 641
++ A G + E + L
Sbjct: 277 IMNAWCSTGLIDEAKAVL 294
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN +I+ G +S + E ++ ++ I VFN L+ + +K +V
Sbjct: 199 PNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKV 258
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M+ GV D+ ++ +++ A C G A+ + +K + L+ DV YS +VK
Sbjct: 259 FKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYD----LQPDVMAYSILVK 314
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + M+ + PN IT++++I+ + ++ AM +F+EM P
Sbjct: 315 GYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFP 374
Query: 432 NSQCCNILLQACVEACQFDRA 452
N Q L+ EA RA
Sbjct: 375 NMQTFRTLIWGFKEARWPRRA 395
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV-EGALQILKIMREDGMSPDVVAY 586
D+ +V++ + +R G P ++T+L+ + G + EG L +L+ M ED + PD + +
Sbjct: 5 DHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPL-LLQQMEEDNVIPDAIFF 63
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + + ++K+A +L EMK +Y TL++ YG + ++ + + Q+
Sbjct: 64 NTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKG---YGLDGQPEEAMKLLQE 120
Query: 647 MWK-AGYKANDTYLKELIEEWCEGVIQDKNQN 677
M K K ND LI+ W +K +N
Sbjct: 121 MAKDVNSKPNDRTFNMLIKAWAHDKNPEKARN 152
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 57/429 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ ++ + +D+ + ++N+ V SLM +L+ L + + +
Sbjct: 115 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 174
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ + +Y++L+ CC GN A E Y E+K KG+ + V++ ++I++ + +
Sbjct: 175 GLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK---TKGI-RSSVYSLNSILEGYLKCQS 230
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCN 437
WQ A + D L +G+ N T+++L++ G + +A +L++E++ G PN N
Sbjct: 231 WQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289
Query: 438 ILLQACVE-----ACQFDRAF--RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
I+L C + AC+ + F ++ T + G G+ + ++ H+ K +
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA- 348
Query: 491 TNTPNFVPNSHY------------SSFDKRF--------SFKPTTTTYNILMKA------ 524
N +P SF+ R F PT YN ++
Sbjct: 349 ----NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 525 --CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++ YR EM VG++P+ +++T LID N++ AL++L M+ G+ D
Sbjct: 405 INLASNVYR------EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 458
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AY T I + + +K A L E++ + PN Y +++ + +++ V++ +
Sbjct: 459 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG---FKNMNNVEEAID 515
Query: 643 VYQDMWKAG 651
+Y+ M G
Sbjct: 516 LYKKMVNEG 524
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 204/488 (41%), Gaps = 59/488 (12%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFC----------NFVREFGKKRDLVSALRAYDA 246
++ CV + +V A+R + D++ C + ++ + + +L SAL +
Sbjct: 116 VITACVKEGNVAEALRL-----KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 170
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+ PN +ID C G+ K+ Y +++++ + ++Y NS++ +
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++ + + G +A++ ++N LL C G A ++ EV AKG+ +V
Sbjct: 231 WQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGI-SPNVV 285
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ I+ A KV ++ML G TPN +T++ L++ G +E A +F M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWT--------LSKTQVALGEDYD 473
A P I+++ C+ R+F LF + + + G +
Sbjct: 346 KDANILPTDTTLGIIIKG---LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD------------------KRFSFKPTT 515
GN + SN+ +++ + TP+ V ++ S D KR K
Sbjct: 403 GNINLASNV-YREMCEVGITPSTV--TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 459
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C D L+NE+R GLSPN + +I NVE A+ + K
Sbjct: 460 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 519
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G+ D+ YT+ I ++S RL A + EM I P+ + L+ G
Sbjct: 520 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 579
Query: 634 LHEVQQCL 641
++ L
Sbjct: 580 FENARKIL 587
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 172/430 (40%), Gaps = 88/430 (20%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M +GV D + +++L+AC GN + A++ + + K A+GV +LD YS
Sbjct: 26 ELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAK---ARGV-ELDQEAYSIF 81
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
V + AL + +M +AG P T++S+I AC G V +A+ L ++M+
Sbjct: 82 VHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGK 141
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
++G PN ++L+ C + ++AF
Sbjct: 142 SMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFE 201
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKP 513
+ KT+ Y N S +E K QS N ++ S F
Sbjct: 202 FYSEM---KTKGIRSSVYSLN----SILEGYLKCQSWQNAFTMFNDALESGLANVF---- 250
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N L+ C + +A L +E+ G+SPN +S+ +I N+ A ++
Sbjct: 251 ---TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M ++G +P+ V +T + + ++ AFS+F MK I P T +++ +
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 367
Query: 632 GSLHE-------------VQQCLA-------------------VYQDMWKAGYKANDTYL 659
G E V C+ VY++M + G +
Sbjct: 368 GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 427
Query: 660 KELIEEWCEG 669
LI+ +C+G
Sbjct: 428 TSLIDGFCKG 437
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 150/358 (41%), Gaps = 22/358 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ T N F LM+ D++ ++ M+ ++ + I++K C
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + ++++ + ++G + Y+TI+ F +A V +M G+T
Sbjct: 366 KAGRSFEGRDLFNK---FVSQGFVP-TCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++SLI+ ++ A+ L +M + G + + + L+ + A L
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R LS + G ++N+E +P K
Sbjct: 482 LNELRGAGLSPNRFIYNSMITG-FKNMNNVEEAIDLYKKMVNEGIP----------CDLK 530
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ + L+K+ Y + EM + G+ P+ + T+LI+ G E A +IL+
Sbjct: 531 TYTSLIDGLLKSGRLLY--ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 588
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M M P V+ Y T I + L++AF L +EM + P+ +TY L+ + +
Sbjct: 589 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 197 IVQLCVNKPDVNLA---IRYAC---IVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
I+ + + ++NLA R C I P + + + + + F K ++ AL+ + K+
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITP-STVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453
Query: 251 LSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
++ T+ID G C D + + +LR ++ N +++NS++ N ++++
Sbjct: 454 GLKMDIKAYGTLID--GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+++YK M G+ D+ +Y L+ +G + A +I+ E + +KG+L D +
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE---MLSKGILP-DDRAH 567
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ + ++ A K+ EDM + P+ + +++LI G +++A L +EML
Sbjct: 568 TVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 627
Query: 427 AGCEPNSQCCNILLQA 442
G P++ +IL+
Sbjct: 628 RGLVPDNITYDILVNG 643
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ NIL+ A +A L N+M VG++ + + +++ AC GN+ A Q
Sbjct: 3 PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ G+ D AY+ + + A SL EM+ P T+ +++ A +
Sbjct: 63 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G+ V + L + DM G N L++ +C
Sbjct: 123 EGN---VAEALRLKDDMVNCGKSMNLAVATSLMKGYC 156
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 189/459 (41%), Gaps = 38/459 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN R + + L S+ PN+ T+I+ G K+ ++ ++
Sbjct: 175 FCNEKR----AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMM 230
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + N+ + ++++ A + V++ M GV D +YN L+ G
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-- 288
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + A G LK D +TY +++ + + A + M+ G+ PN +
Sbjct: 289 -WKEVVRMLEEMSAHG-LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
LI+ A G + + L M++ G P+ NI+ A + D A +F +
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 459 WTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPN-FVPNSHYSSF-------- 505
LS V G D R+ + K Q + PN FV NS
Sbjct: 407 QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 506 DKRFSF-------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
K F F +P +N ++ CT +KA L++ M VG P+ IS+T LI
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIG 526
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G ++ A + L +M G+ PD Y T + R+ R+ A+ +F EM I P
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+VTY T+L E ++ +Y +M +G + N
Sbjct: 587 GVVTYSTILHGLFTTRRFSEAKE---LYLNMITSGKQWN 622
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 174/397 (43%), Gaps = 47/397 (11%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N V N L+ +A L+ +++ K M +LG D+ SYN LLK C N A+E
Sbjct: 127 VNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFC---NEKRAEE 183
Query: 346 IYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E+ H+ A + +V +Y+T++ F A + +M+ G+ PN +T++
Sbjct: 184 AL-ELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYT 242
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++I+ A +V++A +F++M+ G +P++ N L+ + ++ R+ +
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--------KPT 514
+ D + + N++ N+ + RF F KP
Sbjct: 303 GLK-------------------PDCYTYGSLLNYLCNNGRCR-EARFFFDSMIRKGIKPN 342
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y IL+ T + L+N M GLSP+H + I+ A ++ A+ I
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ G+SPDVV + I + R+ A F +M + + PN+ + +L+ YG
Sbjct: 403 KMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV-----YG 457
Query: 633 --SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ + ++ Y +M G + + + ++ C
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN+++ ++ V G+C + K++ Y ++ +Q + ++ FN+++ +L +
Sbjct: 445 APNIFVFNSL--VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILC----NLCTKGQ 498
Query: 311 VYKN------MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
V K M+++G D+ SY L+ CL G E + + + G LK D +
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRI---DEAAKSLDVMLSVG-LKPDEW 554
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A A V +ML G+TP +T+S++++ +A L+ M
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ +G + N NI+L + D AF+LF+S
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 46/295 (15%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-L 420
D+ TYS ++ F + +L +G N I + L+ +A + +AM L
Sbjct: 93 DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL 152
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + GC P+ N LL+ + + A L
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA-------------------- 192
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
D Q + PN V S+ + + F+ YN+ + EM
Sbjct: 193 -----DSQGRSCPPNVV--SYATVINGFFTEGQVDKAYNLFL---------------EMM 230
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ PN +++T +ID + V+ A + + M + G+ PD Y I + + K
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWK 290
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + EEM + ++P+ TY +LL G E + + M + G K N
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR---FFFDSMIRKGIKPN 342
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-E 310
P++ TI+ C +C G MK++ + + + ++ + +L + H L + E
Sbjct: 481 PDVVFFNTIL--CNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL--IGGHCLVGRIDE 536
Query: 311 VYKN---MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+ M +G+ D +YN LL C AG + YG + + G+ V TYS
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI---DDAYGVFREMLRNGITP-GVVTYS 592
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ + + A ++ +M+++G N ++ ++N + V++A LF+ +
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ NI++ A ++ + + A LF
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLF 681
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 168/412 (40%), Gaps = 78/412 (18%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+ID+ G ++ + + ++++NV ++I F+ L+ V A + + M+
Sbjct: 148 MIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYN 207
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D +++IL+ C AQ + +K + DV Y+ +V+ + A
Sbjct: 208 CKPDKIAFSILISILCRKRRATEAQSFFDSLK-----DKFEPDVIVYTNLVRGWCRAGNI 262
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A +V +M AG PN T++ +I+A G + +A +F EML GCEPNS N L
Sbjct: 263 PEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNL 322
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
L+ V+A + ++ +++
Sbjct: 323 LRVHVKAGRTEKVLQVYNQM---------------------------------------- 342
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
KR P T TYN L+++ C D +AL +N M G SPN ++ L +
Sbjct: 343 -------KRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGS 395
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+V GA ++ M+E + V Y +++ V +K L +EM ++PN
Sbjct: 396 IAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPN 455
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM--WKAGYKANDTYLKELIEEWC 667
+ TY L +A+Y M W YK + +E++EE C
Sbjct: 456 VNTYCVL----------------IAMYCGMGHWNNAYK----FFREMVEEKC 487
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 42/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ N VR + + ++ A R + K PN+Y +ID CG ++ ++ +
Sbjct: 247 IVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAE 306
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ N FN+L+ +V A + L+VY M+++G D +YN L+++ C GN
Sbjct: 307 MLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGN 366
Query: 340 -----TVL------------------------------AQEIYGEVKHLEAKGVLKLDVF 364
VL A +Y ++K L+ K +
Sbjct: 367 LDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKA----NTV 422
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++++F D K M LK+K++M V PN T+ LI G A F EM
Sbjct: 423 TYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREM 482
Query: 425 LQAGC-EPNSQCCNILLQACVEACQFDR 451
++ C +P+ +LQ +A Q +
Sbjct: 483 VEEKCLKPSLPVYEKVLQQLRKAGQLKK 510
>gi|168014765|ref|XP_001759922.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689052|gb|EDQ75426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 193/444 (43%), Gaps = 45/444 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F NF+ + ++ ++ K+ + N +I+ G G + + +++ ++R
Sbjct: 241 FGNFLETGSSEAQPLTGFHHWEVRKELQDAFN-----ALINAAGQAGQHKLAESLFSEMR 295
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + L+IY FN+L+ V + L V ++M+ +GV D ++ LL +G
Sbjct: 296 NLGLRLSIYTFNALLRAVVEGRGVSHALRVVRSMEAVGVRPDTHTFTTLLDGYSRSGKLD 355
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + +++ ++K + ++TY+ ++K A + AL+V M +G P++ T+
Sbjct: 356 KAEALLAKME--DSKPNQRPSIYTYNILIKACASKNDPERALRVFAKMKESGTAPDSHTY 413
Query: 402 SSLINACANAG-------------LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+L++AC + ++ + + ++M Q+G + + L+
Sbjct: 414 CALLSACGAVSGRPDLSDAWSRKEVAQRVIAIEKDMAQSGVHHTAASVSALMSVLGSEGI 473
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYS-SFD 506
D + R+ TD + + D + N FV + + ++D
Sbjct: 474 VDAMLQNLRACQ--------------ETDLTTRKKLLDTTAYNTAMNAFVQSKKFDEAWD 519
Query: 507 -----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
+ +P TYNIL+ AC A LM+ MR ++P+ I++ LI
Sbjct: 520 IFTEMRSLDVRPDIYTYNILINACSHKQSVSTALELMDIMRKAKIAPDLITYNSLIKVMC 579
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ L++L M++ G+ PDV + T + KR A L EEM+ + P+
Sbjct: 580 HCGELDSGLRVLGEMQDAGVQPDVTTFNTLLASASYHKRKGLAEYLVEEMRLCNVAPDTH 639
Query: 620 TYITLLRARSRYGSLHEVQQCLAV 643
T ++ R G+L E + L+V
Sbjct: 640 TCSQVISLYMRSGNLAEASEALSV 663
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 185/433 (42%), Gaps = 89/433 (20%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV K +Q ++N L+ A AG LA+ ++ E+++L L+L ++T++ +
Sbjct: 262 EVRKELQD--------AFNALINAAGQAGQHKLAESLFSEMRNLG----LRLSIYTFNAL 309
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + + AL+V M + GV P+T T+++L++ + +G +++A L +M +
Sbjct: 310 LRAVVEGRGVSHALRVVRSMEAVGVRPDTHTFTTLLDGYSRSGKLDKAEALLAKMEDS-- 367
Query: 430 EPNSQCC----NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+PN + NIL++AC +RA R+F K
Sbjct: 368 KPNQRPSIYTYNILIKACASKNDPERALRVFA---------------------------K 400
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--------CTDYY------- 530
K+S T P+SH TY L+ AC +D +
Sbjct: 401 MKESGT-----APDSH---------------TYCALLSACGAVSGRPDLSDAWSRKEVAQ 440
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP-----DVVA 585
RV A+ +M G+ S + L+ G G V+ LQ L+ +E ++ D A
Sbjct: 441 RVIAIEKDMAQSGVHHTAASVSALMSVLGSEGIVDAMLQNLRACQETDLTTRKKLLDTTA 500
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y TA+ V+SK+ +A+ +F EM+ ++P++ TY L+ A S S V L +
Sbjct: 501 YNTAMNAFVQSKKFDEAWDIFTEMRSLDVRPDIYTYNILINACSHKQS---VSTALELMD 557
Query: 646 DMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHL 704
M KA + LI+ C G + + GE+ + LL + H
Sbjct: 558 IMRKAKIAPDLITYNSLIKVMCHCGELDSGLRVLGEMQDAGVQPDVTTFNTLLASASYHK 617
Query: 705 QKSAAENLAIDLR 717
+K AE L ++R
Sbjct: 618 RKGLAEYLVEEMR 630
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 47/386 (12%)
Query: 274 KSRAIYEDLRSQNVTL-----NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++R ++ L + V L N+Y+ + ++ L L+V+ +LGV + SYN
Sbjct: 57 EARKFFDKLLNYGVALSAGSCNLYL--TCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ + G +E + + +E KG + DV +Y+TI+ + Q +++ ++
Sbjct: 115 ILMNSLFRLGKI---REAHHLLMRMEFKGCIP-DVVSYTTIIDGYCHVGELQKVVQLVKE 170
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ PN T+SS+I +G V + + EM++ G P+ L+ +
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNTP---NFVPNSHYS 503
A++LF S ME ++ SI + +
Sbjct: 231 TQAAYKLF-----------------------SEMEAREIVPDSIAFSALICGLSGSGKVV 267
Query: 504 SFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
DK F+ F+P TY L+ C KA L N+M +GL+PN +++T L
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D SG ++ A ++L M G+ ++ Y T + ++ + QA L EEMK +
Sbjct: 328 DGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLH 387
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P+ +TY TL+ A + G + + ++ L
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELL 413
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 169/375 (45%), Gaps = 37/375 (9%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+L+ +++ K MQ G+ ++ +Y+ ++ C +G V +++ ++ + +GV D
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV---LREMMKRGVFP-DH 215
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+T++ F Q A K+ +M + + P++I +S+LI + +G V +A LF E
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGN 475
M++ G EP+ L+ + + +AF L ++ T +A G G
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
D + + H+ R + +TYN ++ C ++A
Sbjct: 336 LDTANELLHE--------------------MCRKGLQLNISTYNTIVNGLCKAGNILQAV 375
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LM EM+ GL P+ I++T L+DA +G + A ++L+ M + G+ P VV + +
Sbjct: 376 KLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S +L+ L + M I PN TY ++++ +Y + ++ +Y+ M G
Sbjct: 436 CMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK---QYCIRNNMRISTEIYRGMCAQGVV 492
Query: 654 ANDTYLKELIEEWCE 668
+ LI+ C+
Sbjct: 493 PDSNTYNILIKGHCK 507
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 176/394 (44%), Gaps = 34/394 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
P++ TIID G C G+ K + ++++ + + N+Y ++S++ + K
Sbjct: 143 PDVVSYTTIID--GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGE 200
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V + M K GV D Y L+ C GNT A +++ E +EA+ ++ D +S +
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE---MEAREIVP-DSIAFSAL 256
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A K+ +M+ G P+ +T+++LI+ G +++A L +M+Q G
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L ++ + D A L Q+ + + I N
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI-----STYNTIVN-------G 364
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR----VKA--LMNEMRTVG 543
+ N + K P T TY LM A YY+ VKA L+ EM G
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA----YYKTGEMVKARELLREMLDRG 420
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQA 602
L P +++ +L++ SG +E ++LK M E G+ P+ Y + +K C+R+ ++ +
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN-NMRIS 479
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ M + P+ TY L++ + ++ E
Sbjct: 480 TEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 69/358 (19%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+CG+ G +++ ++ ++ + + + +L++ ++K ++ M ++G+
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +Y L C +G A E+ E+ + L+L++ TY+TIV A
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEM----CRKGLQLNISTYNTIVNGLCKAGNIL 372
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+K+ E+M AG+ P+TIT+++L++A G + +A L EML G +P N+L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + RL + W L K
Sbjct: 433 NGLCMSGKLEDGERLLK-WMLEK------------------------------------- 454
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWT 552
P TYN +MK C T+ YR M G+ P+ ++
Sbjct: 455 ---------GIMPNAATYNSIMKQYCIRNNMRISTEIYR------GMCAQGVVPDSNTYN 499
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
ILI + N++ A + K M E + +Y IK + K+L +A LFEEM+
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 55/309 (17%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
M LKV + GV NT +++ L+N+ G + +A HL M GC P+ ++
Sbjct: 93 MVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTII 152
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + +L + L
Sbjct: 153 DGYCHVGELQKVVQLVKEMQLK-------------------------------------- 174
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
KP TY+ ++ C V+ ++ EM G+ P+H+ +T LID
Sbjct: 175 ---------GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF 225
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
GN + A ++ M + PD +A++ I S ++ +A LF EM +P+
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDE 285
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQN 677
VTY L+ Y L E+++ ++ M + G N L + C+ G + N+
Sbjct: 286 VTYTALIDG---YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342
Query: 678 QGEVTLCRR 686
E +CR+
Sbjct: 343 LHE--MCRK 349
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 65/327 (19%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN+ + D G+C G+ + + ++ + + LNI +N+++N
Sbjct: 317 TPNVVTYTALAD--GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVN----------- 363
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
C AGN + A ++ E+K + L D TY+T++
Sbjct: 364 ----------------------GLCKAGNILQAVKLMEEMK----EAGLHPDTITYTTLM 397
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ +ML G+ P +T++ L+N +G +E L + ML+ G
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 431 PNSQCCN-ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN+ N I+ Q C+ R+ S + + A G D NT I H ++
Sbjct: 458 PNAATYNSIMKQYCIR-----NNMRI--STEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM------NEMRTVG 543
+ H +KRF+ T ++YN L+K +++ K L+ EMR G
Sbjct: 511 MKEAWFL----HKEMVEKRFNL--TASSYNALIKG----FFKRKKLLEARQLFEEMRREG 560
Query: 544 LSPNHISWTILIDACGGSGNVEGALQI 570
L + + + +D GN+E L++
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLEL 587
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +++ A++ + K+ P+ T++D G+ +K+R + ++ + + +
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN LMN + L+ + K M + G+M + A+YN ++K C+ N ++ EIY
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY--- 483
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + A+GV+ D TY+ ++K A+ + A + ++M+ ++++LI
Sbjct: 484 RGMCAQGVVP-DSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFK 542
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNIL-------------LQAC---VEACQFDRA 452
+ +A LFEEM + G +++ N+ L+ C +E C D+A
Sbjct: 543 RKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDKA 600
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 185/441 (41%), Gaps = 72/441 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
ALR +D ++ +P ++DV G G + + A+ D+R+ V + + ++++
Sbjct: 202 ALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVI 261
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + +YN LL+ AGN A + ++ +E
Sbjct: 262 AAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRV---LREMEDA 318
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K D TY+ + +A A ++Q A K + M+ G+ PNT T+++++ A NAG V++
Sbjct: 319 GC-KPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDE 377
Query: 417 AMHLFE-----------------------------------EMLQAGCEPNSQCCNILLQ 441
A+ LF+ EM ++GC PN N LL
Sbjct: 378 ALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLA 437
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGED--------YDGNTDRISNMEHKDKQSITNT 493
C + R+ + +V L D Y R + + D+ +
Sbjct: 438 VCGKRGMESYVTRVLEG--MKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAG- 494
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
F P TTYN L+ D+ ++++++M++ G PN +S+
Sbjct: 495 -----------------FAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSY 537
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
++L+ GN G I K + + + P V T + + +RL+ F+E+K
Sbjct: 538 SLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKA 597
Query: 612 YQIQPNLVTYITLLRARSRYG 632
+P+LV ++L ++ G
Sbjct: 598 RGHKPDLVILNSMLSIYAKNG 618
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 163/401 (40%), Gaps = 59/401 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++++LR + V +N +++V + + +M+
Sbjct: 188 TVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRA 247
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ A AG L E + L+A+G V TY+ +++VF A
Sbjct: 248 AGVEPDGFTASTVIAA---AGRDGLVDEAVAFFEDLKARGHAPC-VVTYNALLQVFGKAG 303
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V +M AG P+ +T++ L + A AG ++A + M+ G PN+ N
Sbjct: 304 NYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYN 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A A + D A LF DR+
Sbjct: 364 TIMTAYGNAGKVDEALALF--------------------DRM------------------ 385
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P T TYN++ M + + + ++ EM G +PN ++W L+
Sbjct: 386 ---------KKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLL 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G ++L+ M+ + Y T I R AF +++EM
Sbjct: 437 AVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFA 496
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
P L TY LL SR G + ++ M G+K ND
Sbjct: 497 PCLTTYNALLNVLSRQGDWTAAR---SIVSKMKSEGFKPND 534
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 174/426 (40%), Gaps = 40/426 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + TI+ G G ++ A+++ ++ +N ++ + +F LE+
Sbjct: 357 PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N LL C G + +K + ++L TY+T++
Sbjct: 417 LGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCK----VELCRDTYNTLIC 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M +AG P T+++L+N + G A + +M G +P
Sbjct: 473 AYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKP 532
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALG------EDYDGNT 476
N ++LLQ A +EA + + +F SW + +T V E +
Sbjct: 533 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAF 592
Query: 477 DRISNMEHKDKQSITNT--PNFVPNSHYSSFDKRF------SFKPTTTTYNILMK--ACC 526
+ HK I N+ + N YS + F P TYN LM A
Sbjct: 593 QEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKS 652
Query: 527 TDYYRVKALMNEMR---------TVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ + + ++N +R L P+ +S+ +I+ G ++ A ++L M D
Sbjct: 653 NEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIAD 712
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++P V+ Y T + + +A + M +++P +TY ++ + R +
Sbjct: 713 GVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDA 772
Query: 638 QQCLAV 643
+ LAV
Sbjct: 773 RDFLAV 778
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGALQILKIMREDGMSPDVVAYT 587
Y R L +E+R G++P +++ +++D G G + + +L MR G+ PD +
Sbjct: 199 YERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTAS 258
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I R + +A + FE++K P +VTY LL+ +G + L V ++M
Sbjct: 259 TVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQV---FGKAGNYTEALRVLREM 315
Query: 648 WKAGYKANDTYLKEL 662
AG K + EL
Sbjct: 316 EDAGCKPDAVTYNEL 330
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I P IL + F K R L RA+ K P++ I +++ + G Y K+
Sbjct: 565 IFPSWVILRTLVIANF-KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKA 623
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL------------GVMAD 323
++E + ++ ++ +NSLM++ A + E K + +L + D
Sbjct: 624 MEMFESIEQLGLSPDLITYNSLMDMYAKSNE-PWEAEKILNRLRSSQSQQQQQQQQLKPD 682
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYN ++ C G AQ + E + A GV V TY T+V +A + + A
Sbjct: 683 VVSYNTVINGFCKEGLIKEAQRVLSE---MIADGVAPC-VITYHTLVGGYASREMFAEAR 738
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+ + P +T+ ++++ A E A + +A + + L A
Sbjct: 739 EVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEADTNSDEKLLGA-LTAR 797
Query: 444 VEACQFDR 451
+E+ QF R
Sbjct: 798 IESAQFGR 805
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKV 592
AL+ R G + + +++ A G G + +L M G DV AYTT +
Sbjct: 133 ALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHA 192
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
R R ++A LF+E++ + P VTY +L R G + +A+ DM AG
Sbjct: 193 LSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMG--RSWPRVVALLADMRAAGV 250
Query: 653 KAN 655
+ +
Sbjct: 251 EPD 253
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 192/435 (44%), Gaps = 36/435 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASK----KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
FC V+ G++ S RA++ + +H SPN + TI+ V G + ++
Sbjct: 190 FCFVVKSVGQE----SWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVF 245
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+V + V+N++M V A KF E++ M++ G D+ S+N L+ A A
Sbjct: 246 TRAEP-SVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKA 304
Query: 338 GNTV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G LA E+ EV+ + L+ D+ TY+T++ + A + A+ V +DM++
Sbjct: 305 GEMTPNLAIELLTEVR----RSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCE 360
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++++I+ GL +A LF ++ G P++ N L A F R +
Sbjct: 361 PDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYA------FAREGNV 414
Query: 456 FRSWTLSKTQVALGEDYDGNT-DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + + V +G D T + + +M K Q N + Y K P
Sbjct: 415 EKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQ------NDLALQLYRDM-KSSGRNPD 467
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY +L+ + +M+EM G+ P +++ LI +G A +
Sbjct: 468 VITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFD 527
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M G PD +AY+ + + +R K+A + ++EM H I P Y +LR G
Sbjct: 528 CMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRT---LG 584
Query: 633 SLHEVQQCLAVYQDM 647
+ ++V+ V +DM
Sbjct: 585 NANKVEDIGRVVRDM 599
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 168/392 (42%), Gaps = 38/392 (9%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
Y + R T + +F +L+ + FT +V+ +M+ G+ A Y ++ C
Sbjct: 697 YSNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCK 756
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A + + E G + ++ Y +++ + K WQ A V +M + +T
Sbjct: 757 MGFPETAHHL---IDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITV 813
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N W++LI A A +G E+A +F M++ G P N LLQA + + + + +
Sbjct: 814 NRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVV 873
Query: 457 R-----SWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ + +SK+ + L D GN + + H K + + P+ H
Sbjct: 874 QELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA-----GYFPSMHL------ 922
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
Y ++ + C V+A+++EM G P+ W ++ +
Sbjct: 923 ---------YRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRK 973
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
QI + ++EDG+ PD Y I + R R K+ L +EM+ ++P L TY +L+
Sbjct: 974 TTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLV- 1032
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +G V+Q +++++ G K + ++
Sbjct: 1033 --ASFGKQQLVEQAEELFEELQSTGCKLDRSF 1062
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R DI+ N + + +L A+ +D H P+++ +I V G CG K+
Sbjct: 325 RPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQ 384
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ DL S+ + +NS + A + ++ ++ + M K+G D +YN ++
Sbjct: 385 LFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYG 444
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G LA ++Y ++K DV TY+ ++ + A + +ML+ GV
Sbjct: 445 KQGQNDLALQLYRDMK----SSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVK 500
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P T+S+LI A AG +A F+ ML++G P+ +++L + + RA
Sbjct: 501 PTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTF 560
Query: 456 FR 457
++
Sbjct: 561 YK 562
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 156/392 (39%), Gaps = 55/392 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N+ + +I+ G + K+ ++ ++R +T+N V+N+L+ A + V+
Sbjct: 779 NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVF 838
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M K G + S N LL+A + G +E+Y V+ L+ G K+ + ++
Sbjct: 839 NTMMKDGPSPTVDSINGLLQALIVDGRL---EELYVVVQELQDIG-FKISKSSILLMLDA 894
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FA A K+ M +AG P+ + + V + EM +AG +P+
Sbjct: 895 FARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPD 954
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N +L+ V F + ++++ RI
Sbjct: 955 LSIWNSVLKMYVAIDDFRKTTQIYQ--------------------RI------------- 981
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
K +P TYNIL+ C D+ + L M+EMRTVGL P +
Sbjct: 982 --------------KEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDT 1027
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L+ + G VE A ++ + ++ G D Y +K+ S +A LF MK
Sbjct: 1028 YKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMK 1087
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++P + T L+ + G E ++ L+
Sbjct: 1088 DEGVEPTIATMHLLMVSYGSSGQPQEAEKVLS 1119
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 137/320 (42%), Gaps = 16/320 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
++D G+ + + IY +++ +++++ + + ++ + M++ G
Sbjct: 891 MLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAG 950
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N +LK + +IY +K + L+ D TY+ ++ ++
Sbjct: 951 FKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIK----EDGLEPDEDTYNILIVMYCRDHRP 1006
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L + ++M + G+ P T+ SL+ + LVEQA LFEE+ GC+ + +I+
Sbjct: 1007 KEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIM 1066
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ + +A RLF + + + S+ + ++ + +
Sbjct: 1067 MKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVL-------- 1118
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
S+ D S P ++ + ++ DY + +++ GL P+H WT I A
Sbjct: 1119 SNLKETDANLSTLPYSSVIDAYVRN--GDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAAS 1176
Query: 560 GSGNVEGALQILKIMREDGM 579
S + A+ +L +R+ G
Sbjct: 1177 LSQHTSEAILLLNALRDTGF 1196
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 128/337 (37%), Gaps = 57/337 (16%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--AMHL 420
V Y+ ++ V+A + + ++ + M G P+ +++++LINA AG + A+ L
Sbjct: 256 VKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIEL 315
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E+ ++G P+ N L+ AC A + A +F
Sbjct: 316 LTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMV-------------------- 355
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNE 538
+H+ +P TYN ++ C + + L N+
Sbjct: 356 -------------------AHHC--------EPDLWTYNAMISVYGRCGLSGKAEQLFND 388
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G P+ +S+ + A GNVE I + M + G D + Y T I + + +
Sbjct: 389 LESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQ 448
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
A L+ +MK P+++TY L+ + G +++++ + +M G K
Sbjct: 449 NDLALQLYRDMKSSGRNPDVITYTVLIDS---LGKTNKIEEAAGMMSEMLNTGVKPTLRT 505
Query: 659 LKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL 695
LI C K E C + RP L
Sbjct: 506 YSALI---CGYAKAGKPVEAEETFDCMLRSGTRPDQL 539
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 182/436 (41%), Gaps = 63/436 (14%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + ++ +L+ + ++ + + F E+ +M+ L + D+ ++NI L +
Sbjct: 67 YSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFV 126
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G LA E++ ++ K K DV TY+ I+ K + A++ DM+ G +P
Sbjct: 127 EGRIDLALEVFEKI----VKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182
Query: 397 N------------------------------------TITWSSLINACANAGLVEQAMHL 420
+ T+ +++LI+ AG +++A +
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M + GCEP+ N+ L + D A +L + S + + Y+ I
Sbjct: 243 KSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV-YSYNQLLKGIC 301
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
DK + T P +YN ++KA C D L E
Sbjct: 302 KGNCPDKAYLLMTNKMWPKG-----------LCDVVSYNTIIKAFCKIGDTTSAYKLFEE 350
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ +++TI I A G G+ A ++L M E G+SPD + YTT I +S +
Sbjct: 351 MGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGK 410
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ A S+F +M I P+++++ L+ + V + + +Y++M G ++
Sbjct: 411 VEMAHSIFCDMVEQGISPDVISFNALING---FCKCSRVSEAMHLYEEMQNRGSYPDEVT 467
Query: 659 LKELIEEWCEGVIQDK 674
K +I G+I++K
Sbjct: 468 YKLII----GGLIEEK 479
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 49/221 (22%)
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + S I AGL+++A+ +F+EM Q+ C S N + + +FD A
Sbjct: 10 LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLA------ 63
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
N +YS R F ++ TY
Sbjct: 64 ----------------------------------------NHYYSQMGTR-GFSLSSFTY 82
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + C ++ + L+++M T+ P+ ++ I + G ++ AL++ + + +
Sbjct: 83 SRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVK 142
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G PDVV YT I + K+ A + +M H P+
Sbjct: 143 NGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 160/333 (48%), Gaps = 23/333 (6%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K K D T + ++ + W+ A+ +
Sbjct: 138 YNMMIRLHARHNWTDQARGLFFEMQ----KWRCKPDAETCNALINAHGRSGQWRWAMNIM 193
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
EDML + P+ T+++LINAC ++G +A+ L ++M + G P+ NI+L A
Sbjct: 194 EDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTG 253
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS 504
Q+ +A F ++ G + +T ++ + + +T + S
Sbjct: 254 AQYAKALSYF--------ELMKGTNIRPDTTTLNIIIY----CLTKLGQYEKAIGIFKSM 301
Query: 505 FDKRFSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+KR P T+ I + + +A+ + M GL PN +S+ L+ A G
Sbjct: 302 REKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHG 361
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL + ++ G+ PDVV+YT+ + RS++ K+A +FE MK +++PN+V+Y
Sbjct: 362 MNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYN 421
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ A YGS + + + V ++M + G N
Sbjct: 422 AMIDA---YGSNGLLAEAVEVLREMEQDGIYPN 451
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 192/445 (43%), Gaps = 54/445 (12%)
Query: 219 RADILFCNFVREFGKKRDLVS---ALRAYDASKKH---------LSSPNMYICRTIIDVC 266
R + C + E G DLV+ L AY ++ + N+ T +++
Sbjct: 222 REALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNII 281
Query: 267 GIC----GDYMKSRAIYEDLRSQNVTL--NIYVFNSLMN---VNAHDLKFTLEVYKNMQK 317
C G Y K+ I++ +R + ++ F S+++ VN ++ V+ M
Sbjct: 282 IYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQ-IENCRAVFSTMVA 340
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ ++ SYN L+ A G A ++ +K+ L+ DV +Y++++ + ++
Sbjct: 341 EGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKN----SGLRPDVVSYTSLLNSYGRSQ 396
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A +V E M + PN ++++++I+A + GL+ +A+ + EM Q G PN+
Sbjct: 397 QPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSIC 456
Query: 438 ILLQACVEACQ---FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
LL AC + D + + +A Y+ N+ +K +
Sbjct: 457 TLLAACGRCSRKVNIDVVLQAAERRHIKLNTIA----YNSAIGSYMNVGEFEKAT----- 507
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
S Y S K P T+ +L+ CC T Y ++EM + + +++
Sbjct: 508 -----SMYRSMRKS-KVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYS 561
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
SG + A + M+ G SPDVV YT + ++ K+A +L +EM+ Y
Sbjct: 562 --------SGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEY 613
Query: 613 QIQPNLVTYITLLRARSRYGSLHEV 637
IQP+ + L+RA ++ G +V
Sbjct: 614 NIQPDTIACSALMRAFNKGGDPSKV 638
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 162/380 (42%), Gaps = 26/380 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ C +I+ G G + + I ED+ + + + +N+L+N ++ + + L++
Sbjct: 168 PDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKL 227
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M + GV D+ ++NI+L A A + +K ++ D T + I+
Sbjct: 228 CKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTN----IRPDTTTLNIIIY 283
Query: 372 VFADAKWWQMALKVKEDMLS--AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A+ + + M A P+ +T++S+I+ + G +E +F M+ G
Sbjct: 284 CLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGL 343
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N L+ A A +F + S L D T +++ +
Sbjct: 344 KPNIVSYNTLMGAYASHGMNKEALSVFNAIKNS----GLRPDVVSYTSLLNSYGRSQQ-- 397
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
P F+ KR KP +YN ++ A ++ +A+ + EM G+
Sbjct: 398 --------PKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIY 449
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +S L+ ACG +L+ + + +AY +AI + ++A S+
Sbjct: 450 PNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSM 509
Query: 606 FEEMKHYQIQPNLVTYITLL 625
+ M+ ++ P+ VT+ L+
Sbjct: 510 YRSMRKSKVIPDAVTFTVLI 529
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T++ CG C + + + +++ LN +NS + +N + + +
Sbjct: 450 PNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSM 509
Query: 312 YKNMQKLGVMADMASYNILLKACC---------------LAGNTVLAQEIYGEVKHLEAK 356
Y++M+K V+ D ++ +L+ CC + + +E Y K EA+
Sbjct: 510 YRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAE 569
Query: 357 GVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ DV TY+ ++ + A+ W+ A + ++M + P+TI S+L+ A
Sbjct: 570 SMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAF 629
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
G + + L E M E + + V AC R +R
Sbjct: 630 NKGGDPSKVLILAEFMR----EKEIPLSDAIFFEMVSACSLLRDWR 671
>gi|110740372|dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--------DVFTYST 368
KL + M+++N+L+ C + Q+I G A+GVL+L D Y+T
Sbjct: 460 KLILNPTMSTFNMLMSVCASS------QDIEG------ARGVLRLVQESGMTADCKLYTT 507
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + +V M ++GV N T+ +LI+ CA AG V +A + +
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N L+ AC ++ DRAF D ++ M+ +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAF-----------------------DVLAEMKAE--- 601
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+H P + LMKACC R K + + G+
Sbjct: 602 -----------TH--------PIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+TI +++C SG+ + A I K M+E ++PD V ++ I V +K L +AF +
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ K I+ ++Y +L+ A + + ++ L +Y+ + + + + LI
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACC---NAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
Query: 667 CEG 669
CEG
Sbjct: 760 CEG 762
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ + Q ++ ++ +NS+++ A + V M K G M + ++N LL C
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G + G K + GV + DVFTY+T++ A K+ + M+ G
Sbjct: 285 SSGK---PNDAIGVFKRMCRDGV-EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN+ T+ +L++ A G + + HL + M++ G +P+ NIL+ + + D A L
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 456 F---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPNFVPNSHY------ 502
F R L+ V G D ++ + + + I+ TP+ V +
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 503 -SSFDKRFSFK---------PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+DK P +N L+ C + R K + + M V + + I+
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LID G V+ A ++L+ M DG+ P+ V Y T I ++ R++ AFSLF +M
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA 580
Query: 611 HYQIQPNLVTYITLLRA 627
+ P +VTY T+L+
Sbjct: 581 SKGVNPGIVTYSTILQG 597
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 177/430 (41%), Gaps = 31/430 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV-- 311
PN+ +ID C G + A + T F+ L+ D K T E
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC-DKKRTSEAMD 147
Query: 312 --YKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYST 368
+ M LG ++ SY ILLK C + A ++ + + +G DV +Y+T
Sbjct: 148 IALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207
Query: 369 IVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + + A + + ML G++P+ +T++S+I+A + A +++A + M++
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G PN N LL + + + A +F+ DG +
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMC-----------RDGVEPDVFTYNTLMG 316
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
N + + S KR KP + TY L+ T+ VK L++ M G+
Sbjct: 317 YLCKNGRSMEARKIFDSMVKR-GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI G V+ A+ + MR G++PD V Y + ++ A +
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435
Query: 606 FEEMKHYQIQPNLVTYITLLR---ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F + + P+ V + L+ AR ++ E LAV +M G N+ + L
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEE----LAV--EMIGRGICPNNIFFNTL 489
Query: 663 IEEWC-EGVI 671
+ C EG++
Sbjct: 490 LNHLCKEGMV 499
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 161/394 (40%), Gaps = 58/394 (14%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ SYN ++ G + Y + +G L DV TY++I+ + A+
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQL--DTAYHLFDQMLDQG-LSPDVVTYNSIISALSKARA 253
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V M+ G PN IT +SL++ ++G A+ +F+ M + G EP+ N
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ + + A ++F S + + N+ + H + V
Sbjct: 314 LMGYLCKNGRSMEARKIFDSM--------VKRGHKPNSATYGTLLH----GYATEGSLVK 361
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILI 555
H R +P +NIL+ T + +V L ++MR GL+P+ +++ I++
Sbjct: 362 MHHLLDMMVRNGIQPDHYIFNILI-GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSK----------------- 597
DA G V+ A+ + +G++PD V + I +C R K
Sbjct: 421 DALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC 480
Query: 598 -----------------RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ +A ++F+ M +Q +++TY TL+ +G + E +
Sbjct: 481 PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKL 540
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
L + M G K N+ +I +C+ G I+D
Sbjct: 541 L---EGMVLDGVKPNEVTYNTMINGYCKNGRIED 571
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K + A+ + ++ +P+ ++D + G + A + L
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +T + VF +L++ K+ E+ M G+ + +N LL C G
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ I+ + ++ ++ DV TY+T++ + A K+ E M+ GV PN +T
Sbjct: 500 ARAKNIFDLMVRVD----VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++++IN G +E A LF +M G P + +LQ +A
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601
>gi|145353124|ref|NP_195209.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g34830, chloroplastic; Flags: Precursor
gi|332661026|gb|AEE86426.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--------DVFTYST 368
KL + M+++N+L+ C + Q+I G A+GVL+L D Y+T
Sbjct: 460 KLILNPTMSTFNMLMSVCASS------QDIEG------ARGVLRLVQESGMTADCKLYTT 507
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + +V M ++GV N T+ +LI+ CA AG V +A + +
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N L+ AC ++ DRAF D ++ M+ +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAF-----------------------DVLAEMKAE--- 601
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+H P + LMKACC R K + + G+
Sbjct: 602 -----------TH--------PIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+TI +++C SG+ + A I K M+E ++PD V ++ I V +K L +AF +
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ K I+ ++Y +L+ A + + ++ L +Y+ + + + + LI
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACC---NAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
Query: 667 CEG 669
CEG
Sbjct: 760 CEG 762
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 56/397 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN Y +I G + ++ +D+ + ++ +N L+ + +E+
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G + +YN+L+ C G+ A E+ +++L + G K Y+T++K
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL---LRNLPSHGC-KPSTVNYNTVLK 120
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A+ W A ++ +ML PN T++ +I + GL++QA+ L E+M + GC
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ E D A L LSK
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGL-----LSKM--------------------------- 208
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
K + KP TYN L+K C+ V A LM+ M G P+++
Sbjct: 209 ---------------KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNV 253
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI G + A+++ K M + G +P+ + Y+T I ++ +L QA LF EM
Sbjct: 254 TFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 313
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
H P+ + Y L + ++ E Q + QD
Sbjct: 314 GHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 349
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 37/306 (12%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ +TY+ ++ + + AL V +DML G P+ +T++ L+ A QAM L
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M GC PN+ N+L+ D A L R+
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLP--------------------- 104
Query: 482 MEHKDKQSITNTPNFVPN----SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYR 531
H K S N + + D+ R + P T+N+++ + C
Sbjct: 105 -SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 163
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A L+ +M G + N +++ +I+ NV+GA+ +L M+ G PD+V Y T
Sbjct: 164 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 223
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+K + R A L + M P+ VT+ TL+ + G + + + V++ M
Sbjct: 224 LKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA---IEVFKQMPD 280
Query: 650 AGYKAN 655
G N
Sbjct: 281 KGCTPN 286
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++A C Y + L++ MR G +PN++++ +L+D G G+V+ AL++
Sbjct: 40 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 99
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ + G P V Y T +K ++R A L EM PN T+ ++ + R
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G L QQ + + + M K G AN +I CE
Sbjct: 160 KGLL---QQAIQLLEKMSKHGCTANIVTYNAIINGLCE 194
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 160/384 (41%), Gaps = 41/384 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + + +R++ T N +N LM+ D+ LE+ +N+ G +YN
Sbjct: 58 YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+LK C A A E+ E+ + T++ ++ Q A+++ E M
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPP----NEATFNVVIYSLCRKGLLQQAIQLLEKM 173
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G T N +T++++IN V+ AM L +M GC+P+ N LL+ A ++
Sbjct: 174 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARW 233
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNT------------DRISNMEHKDKQSITNTPNFV 497
A L + T + L ++ NT D I + + T
Sbjct: 234 VDAEELMDNMTQNG---CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT------ 284
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
PNS S T + L KA T + L NEM G +P+ I + +L +
Sbjct: 285 PNSITYS-----------TIISGLAKA--TKLDQALELFNEMGHKGFNPDKI-YQLLAEC 330
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+E A+Q ++ +++ G+SP V Y + R+ + + A + M P+
Sbjct: 331 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 390
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+TY+ L+ + G L+E ++ L
Sbjct: 391 DLTYVILIEGLAYEGYLNEARELL 414
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 59/339 (17%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D + + + E+ T N+ ++ SL L+ +++ + M K G A++ +YN +
Sbjct: 132 DELVTEMLRENCPPNEATFNVVIY-SLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAI 188
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C N A + ++K K D+ TY+T++K A W A ++ ++M
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKP----DIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G P+ +T+++LI GL+ A+ +F++M GC PNS + ++ +A + D
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+A LF + M HK F P+ Y
Sbjct: 305 QALELF-----------------------NEMGHK---------GFNPDKIYQ------- 325
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGA 567
L+ C D ++ + +R + G+SP+ + + ++ +G E A
Sbjct: 326 ----------LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 375
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I+ M G PD + Y I+ L +A L
Sbjct: 376 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA-CGGSGNVE 565
+P TYN L+ C AL +++M G +P+ +++ IL++A C G G +
Sbjct: 1 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A++++ +MR +G +P+ V Y + + A L + + +P+ V Y T+L
Sbjct: 61 -AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119
Query: 626 R---ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+ + R+G E + +M + N+ +I C +G++Q Q
Sbjct: 120 KGLCSAERWGDADE------LVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 168
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKS 275
P + F + +K L A++ + KH + N+ II+ G+C + +
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN--GLCEQRNVDGA 201
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++S +I +N+L+ +A E+ NM + G + D ++N L+
Sbjct: 202 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGF 261
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM---- 389
C G V A E++ K + KG + TYSTI+ A A AL++ +M
Sbjct: 262 LCQKGLMVDAIEVF---KQMPDKGCTP-NSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 390 ------------------------------LSAGVTPNTITWSSLINACANAGLVEQAMH 419
+G++P+T+ +++++ G E A+
Sbjct: 318 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 420 LFEEMLQAGCEPNSQCCNILLQA 442
+ M+ +GC P+ IL++
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEG 400
>gi|110741791|dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--------DVFTYST 368
KL + M+++N+L+ C + Q+I G A+GVL+L D Y+T
Sbjct: 460 KLILNPTMSTFNMLMSVCASS------QDIEG------ARGVLRLVQESGMTADCKLYTT 507
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + +V M ++GV N T+ +LI+ CA AG V +A + +
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N L+ AC ++ DRAF D ++ M+ +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAF-----------------------DVLAEMKAE--- 601
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+H P + LMKACC R K + + G+
Sbjct: 602 -----------TH--------PIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+TI +++C SG+ + A I K M+E ++PD V ++ I V +K L +AF +
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ K I+ ++Y +L+ A + + ++ L +Y+ + + + + LI
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACC---NAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
Query: 667 CEG 669
CEG
Sbjct: 760 CEG 762
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 186/442 (42%), Gaps = 46/442 (10%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + E++ + + N +++L++ L + + + M + G + +YN ++
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A E +G ++ + A+G D+ TY+ ++ F ++ L++ ++
Sbjct: 153 GFCRARRV---DEAHGFMEQMVAEGC-HPDIITYTALIGGFCKSRDVGRGLELLGEVTRR 208
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ +T+S++I+ AG + A+ +FEEM C P + N L+ A D A
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEA 265
Query: 453 FRLFRSWTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSS 504
RL K T L + R+ + +Q + N +P+ V + S
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAF-CKMGRLDDAYELFQQMVANKLSPDVV--TFTSL 322
Query: 505 FD------------------KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
D R PT TYN ++ C + + L+ + R+ G
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 545 SPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVA-YTTAIKVCVRSKRLKQA 602
PN +++ IL+ C +G + ALQ L ++ E G P VA Y + R R A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+EEM P T+ T++ A + H+ QQ + ++M K G+ +
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCK---AHQPQQAHELLEEMIKYGHTPGPGTCDAV 499
Query: 663 IEEWCE-GVIQDKNQNQGEVTL 683
+ +C G+IQ ++ E+ L
Sbjct: 500 VSAYCRAGMIQKADELASELRL 521
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 162/390 (41%), Gaps = 66/390 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLR------SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYK 313
II + G + KSR + L + T +I ++++++ A L+ +++++
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M +YN L+ C AG+ A + G K ++ K DV TY+T++ F
Sbjct: 239 EMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLG--KMVDDK--CAPDVVTYTTLMSAF 291
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A ++ + M++ ++P+ +T++SL++ G +E A+ L EE+ + GC P
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N ++ +A Q +A L + +
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADF--------------------------------RS 379
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT-VGLSPNHIS 550
FVPN T TYNIL+ CC +AL ++++ + G P ++
Sbjct: 380 RGFVPN---------------TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 424
Query: 551 -WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ I++DA G + A+Q + M + G P + T + ++ + +QA L EEM
Sbjct: 425 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y P T ++ A R G + + +
Sbjct: 485 IKYGHTPGPGTCDAVVSAYCRAGMIQKADE 514
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 139/340 (40%), Gaps = 52/340 (15%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A L+ ++V + M + D + +++++ CL A+E+ E+ H +G +
Sbjct: 52 ARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLH---RG-MAA 107
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ TYS +V + A+ + E M G P +T++S+I A V++A
Sbjct: 108 NAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFM 167
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
E+M+ GC P+ L+ ++ R L T
Sbjct: 168 EQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT--------------------- 206
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
R F P TY+ ++ C R++ ++
Sbjct: 207 --------------------------RRGFTPDIVTYSTVIDGLCK-AGRLRDAVDIFEE 239
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ +P I++ LI +G+++ A+++L M +D +PDVV YTT + + RL
Sbjct: 240 MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDD 299
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A+ LF++M ++ P++VT+ +L+ G + + + L
Sbjct: 300 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 339
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 149/361 (41%), Gaps = 30/361 (8%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N TL + V + + D + E+ + M G+ A+ +Y+ L+ C E
Sbjct: 74 NTTLTVVVQSLCLGDRVDDAR---ELVEEMLHRGMAANAITYSALVDGLCKCERL---DE 127
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
V+ + +G V TY++I+ F A+ A E M++ G P+ IT+++LI
Sbjct: 128 AVALVETMAERGCAPT-VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ V + + L E+ + G P+ + ++ +A + A +F + + T
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTA 246
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+ G R +M+ ++I V + P TY LM A
Sbjct: 247 ITYNSLIGGYC-RAGDMD----EAIRLLGKMVDD----------KCAPDVVTYTTLMSAF 291
Query: 526 CT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D Y L +M LSP+ +++T L+D G G +E AL++L+ + G
Sbjct: 292 CKMGRLDDAYE---LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P + Y + ++ ++++A L + + PN VTY L+ R G + Q
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408
Query: 641 L 641
L
Sbjct: 409 L 409
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 57/312 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N+++ C AG A +Y ++ D TY+ +V + A+ + A++V
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMNDAHPP-----DFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++M+SA P+ T + ++ + V+ A L EEML G N+ + L+ +
Sbjct: 63 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 122
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ D A L T+++ A
Sbjct: 123 ERLDEAVALVE--TMAERGCA--------------------------------------- 141
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
PT TYN ++ C M +M G P+ I++T LI S +V
Sbjct: 142 ------PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDV 195
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
L++L + G +PD+V Y+T I ++ RL+ A +FEEM P +TY +L
Sbjct: 196 GRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSL 252
Query: 625 LRARSRYGSLHE 636
+ R G + E
Sbjct: 253 IGGYCRAGDMDE 264
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 513 PTTTTYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TT +++++ C RV + L+ EM G++ N I+++ L+D ++ A+
Sbjct: 72 PDNTTLTVVVQSLCLGD-RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+++ M E G +P VV Y + I R++R+ +A E+M P+++TY L+
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGG-- 188
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ +V + L + ++ + G+ + +I+ C+ G ++D
Sbjct: 189 -FCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 232
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 52/268 (19%)
Query: 191 LDEEFRIVQ-LCVNK--PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
LD+ + + Q + NK PDV + F + V + + AL +
Sbjct: 297 LDDAYELFQQMVANKLSPDV--------------VTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ P +Y ++D G C A+ ++
Sbjct: 343 TRRGCPPTIYTYNCVVD--GYC-------------------------------KANQVRK 369
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ + + G + + +YNIL+ CC AG T A + ++ G V Y+
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN--SEGGPCPTSVAMYA 427
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ A++ E+M+ G P T+++++ A A +QA L EEM++
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRL 455
G P C+ ++ A A +A L
Sbjct: 488 GHTPGPGTCDAVVSAYCRAGMIQKADEL 515
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 173/403 (42%), Gaps = 38/403 (9%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK +D L+ DA K C II VC GD + A++E+ + + +I
Sbjct: 307 GKIQDASRILK--DAKFKGFVPDEFTYCSLIIGVCQD-GDIDHALALFEEALGKGLKPSI 363
Query: 292 YVFNSLM-NVNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAG-----NTVLAQ 344
++N+L+ ++ L L++ +M K G+ D+ +YN+++ C G N +L
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I AKG L D+FT++T++ + A+ + + M S GVTP+ IT++S+
Sbjct: 424 AI--------AKGYLP-DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTL 461
+N A E M F+ +++ GC PN NIL+++ +A + A L R+ L
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V+ G G + N + + + + ++++ T TYNI+
Sbjct: 535 IPDPVSFGTVISGFCN---NGDLDEAYQL-----------FRRMEQQYRICHTVATYNIM 580
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A D + L +EM G P+ ++ ++ID GNV L E G
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGF 640
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
P + + I R+ +A + M + P V I
Sbjct: 641 VPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTI 683
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 201/454 (44%), Gaps = 48/454 (10%)
Query: 207 VNLAIRYACIVPRADILFCNF---VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
V L +++ I P C F ++ F + + ++ALR + N + T+I
Sbjct: 133 VYLRMKHEGIAPDV----CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVI 188
Query: 264 DVCGICGDY-----MKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ 316
G Y +++ ++ + + +I FN LM++ L+ ++ +
Sbjct: 189 S-----GFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243
Query: 317 KLGVMADMASYNILLKACCLAG------NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K GV ++ ++NI ++ C G + V+ E Y + + KG L+ D FTY+TI+
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY--LHKMVNKG-LEPDDFTYNTII 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ Q A ++ +D G P+ T+ SLI G ++ A+ LFEE L G +
Sbjct: 301 YGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLK 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N L++ + +A +L ++ + D I+ + K
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDM----SKEGMSPDIWTYNLVINGL---CKMGC 413
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-----ALMNEMRTVGLS 545
+ N + N+ + + P T+N L+ C R+K +++ M + G++
Sbjct: 414 VSDANNLLNAAIAK-----GYLPDIFTFNTLIDGYCK---RLKMDNAIGILDSMWSHGVT 465
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++ +++ + E ++ K++ E G P+++ Y I+ +++++ +A L
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
EE+++ + P+ V++ T++ G L E Q
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/433 (19%), Positives = 178/433 (41%), Gaps = 41/433 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASY 327
G ++ ++E + N +I+ +N++MN+ F +VY M+ G+ D+ ++
Sbjct: 90 GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C + A + + ++ ++G +L+ Y T++ F + + A ++
Sbjct: 150 TIRIKSFCRTKRPLAALRL---LNNMPSQGC-ELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
ML G+ P+ T++ L++ G +++ L ++L+ G PN NI +Q C +
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF- 505
++ + V G + D T + I + + ++ + F
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325
Query: 506 DKRFSF----------------------------KPTTTTYNILMKACCTDYYRVKAL-- 535
F++ KP+ YN L+K +KAL
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQL 385
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
MN+M G+SP+ ++ ++I+ G V A +L G PD+ + T I +
Sbjct: 386 MNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCK 445
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ A + + M + + P+++TY ++L + +V + ++ + + G N
Sbjct: 446 RLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVME---TFKMIMEKGCLPN 502
Query: 656 DTYLKELIEEWCE 668
LIE C+
Sbjct: 503 IITYNILIESLCK 515
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 177/457 (38%), Gaps = 68/457 (14%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYIC-RTIIDVCGICGDYMKSRAIYEDLR---SQNVTL 289
++D + AL +++ KK + ++ + +I+ G G++ + ++R ++
Sbjct: 17 QKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLE 76
Query: 290 NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+YV ++ ++V++ M + SYN ++ G A ++Y
Sbjct: 77 GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+KH +G+ DV T++ +K F K AL++ +M S G N + + ++I+
Sbjct: 137 MKH---EGIAP-DVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFY 192
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+A LF +ML+ G P+ N L+ + +L + K V
Sbjct: 193 EENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNK--VLKNGVC-- 248
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--- 526
PN T+NI ++ C
Sbjct: 249 ------------------------PNLF-------------------TFNIFIQGLCRKG 265
Query: 527 ------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ + +++M GL P+ ++ +I G ++ A +ILK + G
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD Y + I + + A +LFEE ++P++V Y TL++ S+ G V +
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL---VLKA 382
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
L + DM K G + +I C+ G + D N
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 21/329 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+ + G + D +Y L+ C G+ A ++ E KG LK + Y+T++
Sbjct: 315 ILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL---GKG-LKPSIVLYNTLI 370
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + AL++ DM G++P+ T++ +IN G V A +L + G
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL 430
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRS-WTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + D A + S W+ T D I+ +
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT-----------PDVITYNSILNGLC 479
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P V + +K P TYNIL+++ C +AL + E+R GL P+
Sbjct: 480 KAAKPEDVMETFKMIMEK--GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 548 HISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+S+ +I +G+++ A Q+ + M + + V Y I + A LF
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
EM P+ TY ++ + G+++
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVN 626
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 57/396 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ S + + F ++M + DL L + + M + G S N+++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + D +T++T+V A + A+++ + ML G
Sbjct: 271 KEGR---VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++S+I+ G V++A+ + ++M+ C PN+ N L+ + Q + A L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T SK P
Sbjct: 388 ARVLT-SK----------------------------------------------GILPDV 400
Query: 516 TTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L++ C T +RV L EMR+ G P+ ++ +LID+ G ++ AL +LK
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G + V+ Y T I ++ + ++A +F+EM+ + + N VTY TL+ +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ + Q + M G K + L+ +C G
Sbjct: 521 VEDAAQLM---DQMIMEGQKPDKYTYNSLLTHFCRG 553
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 133/652 (20%), Positives = 253/652 (38%), Gaps = 102/652 (15%)
Query: 8 SSSSSSAIVATQTRLYNH-RNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRD 66
+S S+A+ +T +L + R++P+ +LF LAS + +
Sbjct: 39 ASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASK--------------------KPN 78
Query: 67 LSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIRE 126
S Y ++ +L + G ++ I+E + S + ++ +E A ++
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ---- 134
Query: 127 GRIDCVVGVLK-KLNELGVAPLELFDGSGFKLL-KNECQRLLDSGEVEMFV-GLMEVLEE 183
D ++ V+ ++E G+ P F LL +L++ +M V G+ +
Sbjct: 135 ---DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVST 191
Query: 184 FRLPVKELDEEFRI---VQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
F + +K L ++ + + + P L VP F ++ + ++ DL A
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGL-------VPDEKT-FTTVMQGYIEEGDLDGA 243
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL-NIYVFNSL 297
LR + + S + I+ G C G + +++ +Q+ + Y FN+L
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVH--GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N A +K +E+ M + G D+ +YN ++ C G A E+ ++ +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ TY+T++ + A ++ + S G+ P+ T++SLI
Sbjct: 362 SP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
AM LFEEM GCEP+ N+L+ + + D A + + LS ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV------- 470
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVK 533
TYN L+ C +
Sbjct: 471 ----------------------------------------ITYNTLIDGFCKANKTREAE 490
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ +EM G+S N +++ LID S VE A Q++ M +G PD Y + +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
R +K+A + + M +P++VTY TL+ + G + + L Q
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 175/386 (45%), Gaps = 35/386 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+++ G+C G + I + + + ++Y +NS+++ ++K +
Sbjct: 293 PDQYTFNTLVN--GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M + +YN L+ C A E+ + L +KG+L DV T++++
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL---ARVLTSKGILP-DVCTFNSL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + ++A+++ E+M S G P+ T++ LI++ + G +++A+++ ++M +GC
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEH 484
+ N L+ +A + A +F + S+ V DG + R+ +
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
Q I KP TYN L+ C D + ++ M +
Sbjct: 527 LMDQMIMEGQ-----------------KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ LI +G VE A ++L+ ++ G++ AY I+ R ++ +A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 603 FSLFEEM-KHYQIQPNLVTYITLLRA 627
+LF EM + + P+ V+Y + R
Sbjct: 630 INLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 224/546 (41%), Gaps = 55/546 (10%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDV 265
++ A ++ + D+ + +R + D +ALR ++ ASKK SP + I+
Sbjct: 36 ISFASPHSAALSSTDVKLLDSLR---SQPDDSAALRLFNLASKKPNFSPEPALYEEILLR 92
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE------VYKNMQKLG 319
G G + + I ED++S + F L+ A +F L+ V + + G
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA---QFELQDEILSVVDWMIDEFG 149
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D YN +L + GN++ EI + G+ K DV T++ ++K A
Sbjct: 150 LKPDTHFYNRMLN-LLVDGNSLKLVEISH--AKMSVWGI-KPDVSTFNVLIKALCRAHQL 205
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A+ + EDM S G+ P+ T+++++ G ++ A+ + E+M++ GC ++ N++
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDK------Q 488
+ + + + A + +S + Y NT + +++H + Q
Sbjct: 266 VHGFCKEGRVEDALNFIQE--MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKACCTDYYRVK 533
+ + NS S K K P T TYN L+ C + +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L + + G+ P+ ++ LI + N A+++ + MR G PD Y I
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L +A ++ ++M+ +++TY TL+ + E ++ ++ +M G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE---IFDEMEVHG 500
Query: 652 YKANDTYLKELIEEWCEG-VIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAE 710
N LI+ C+ ++D Q ++ + Q+P + H +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM----EGQKPDKYTYNSLLTHFCRGGDI 556
Query: 711 NLAIDL 716
A D+
Sbjct: 557 KKAADI 562
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 140/338 (41%), Gaps = 26/338 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN T+I ++ + L S+ + ++ FNSL+ + + +E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G D +YN+L+ + C G E +K +E G + V TY+T++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKL---DEALNMLKQMELSGCAR-SVITYNTLI 477
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A ++ ++M GV+ N++T+++LI+ + VE A L ++M+ G +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNMEHK 485
P+ N LL +A + ++ T + + V G G R+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ N P+++ F + TT N+ +R NE
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL---------FREMLEQNEA-----P 643
Query: 546 PNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPD 582
P+ +S+ I+ C G G + A+ L + E G P+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 43/337 (12%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K + + +V Y+ +KVF + A K+ ++ML GV P+ T+S++I+
Sbjct: 163 LKFFQERLKFNREVVVYNVTLKVFRKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCAR 222
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSKT 464
L ++A+ FE+M G EP+ + ++ + A ++A L+ W L T
Sbjct: 223 LCNLADKAVEWFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDAT 282
Query: 465 QVA-------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ + ++DG + M K KP
Sbjct: 283 AFSTLIRIYKVAGNFDGCLNVYEEM------------------------KALGVKPNLVI 318
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNIL+ A ++VK ++ GLSP+ +++ L+ A G + E A +I + M+
Sbjct: 319 YNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMK 378
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ +VV Y + + +C + +A +FE+MK I+P+ T+ +++ S G +
Sbjct: 379 EKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVS 438
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
E + L +M++AG++ N L LI+ C G Q
Sbjct: 439 EAENTL---NEMFEAGFQPNIFILTSLIQ--CYGKAQ 470
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEV 311
P+ T+ID G G+ K+ ++Y+ R+ L+ F++L+ + A + L V
Sbjct: 244 PDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNV 303
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M+ LGV ++ YNILL A A ++ Y ++ L TY+ ++
Sbjct: 304 YEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDI----IDNGLSPSFVTYAALLH 359
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A++ + A K+ +M G+ N + ++S++ CA+ G V++A+ +FE+M +G +P
Sbjct: 360 AYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKP 419
Query: 432 NS 433
+S
Sbjct: 420 DS 421
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 8/239 (3%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D+ + +G+ ++ AL YD ++ + T+I + + G++ +YE
Sbjct: 246 DVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYE 305
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLA 337
++++ V N+ ++N L++ K +V K Q + G+ +Y LL A A
Sbjct: 306 EMKALGVKPNLVIYNILLDAMGR-AKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRA 364
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A +IY E+K KG L L+V Y++I+ + AD A+++ EDM S+G+ P+
Sbjct: 365 RYGEDAFKIYREMKE---KG-LGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPD 420
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ T+SS+I + G V +A + EM +AG +PN L+Q +A + D F
Sbjct: 421 SWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTF 479
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 140/323 (43%), Gaps = 34/323 (10%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLEVYKNMQKLGVMADMAS 326
D K+ +++++ + V + + F+++++ N D +E ++ M G+ D +
Sbjct: 191 DLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADK--AVEWFEKMPSFGLEPDDVT 248
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+ ++ + AGN A +Y + G +LD +ST+++++ A + L V
Sbjct: 249 LSTMIDSYGRAGNVEKALSLYDRAR----TGEWRLDATAFSTLIRIYKVAGNFDGCLNVY 304
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M + GV PN + ++ L++A A Q +++++ G P+ LL A A
Sbjct: 305 EEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRA 364
Query: 447 CQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ AF+++R + LG + Y+ +++ H DK
Sbjct: 365 RYGEDAFKIYR----EMKEKGLGLNVVLYNSILAMCADLGHVDKA-------------VE 407
Query: 504 SFD--KRFSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
F+ K KP + T++ I + +CC + +NEM G PN T LI G
Sbjct: 408 IFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYG 467
Query: 560 GSGNVEGALQILKIMREDGMSPD 582
+ ++ + + E ++PD
Sbjct: 468 KAQRIDDVVNTFNRIFELVITPD 490
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 6/220 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F +R + + L Y+ K PN+ I ++D G + + Y+D+
Sbjct: 284 FSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDII 343
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + + +L++ A + ++Y+ M++ G+ ++ YN +L C G+
Sbjct: 344 DNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVD 403
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A EI+ ++K + G+ K D +T+S+++ +F+ A +M AG PN
Sbjct: 404 KAVEIFEDMK---SSGI-KPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFIL 459
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+SLI A ++ ++ F + + P+ + C LL
Sbjct: 460 TSLIQCYGKAQRIDDVVNTFNRIFELVITPDDRFCGCLLN 499
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 54/369 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M + + ++ ++++++ C G A ++ V+ ++A G V TY+TI+
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV---VEDMKAWG-FSPSVITYNTII 271
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A + ++M++ + PN IT++ LI+ V A +FEEM + G +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ + D A L D++S M
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGL--------------------QDKMSGM-------- 363
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
KP TYN L+ C + +++++ GL+PN
Sbjct: 364 -------------------GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ LIDA G +G ++ A + +M + G+ P+V Y I R +K+A L +E
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
M+ ++ +LVTY L+ A + G + + L M K G +AN LI+ +C
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524
Query: 668 EGVIQDKNQ 676
+G +++ N+
Sbjct: 525 KGKLEEANR 533
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 159/369 (43%), Gaps = 60/369 (16%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G + K+ + ED+++ + ++ +N++++ A + + K M +
Sbjct: 236 INGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ ++NIL+ C N A++++ E ++ +G L+ +V TY++++
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEE---MQRQG-LQPNVVTYNSLINGLCSNGKLD 351
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL +++ M G+ PN +T+++LIN ++++A + +++ + G PN N L+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
A +A + D AF L RS L T V
Sbjct: 412 DAYGKAGRMDDAF-LLRSMMLD-TGVC--------------------------------- 436
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
P +TYN L+ C + + L EM GL + +++ IL+DA
Sbjct: 437 ------------PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 559 GGSGNVEGALQILK---IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G A+++L +M + G ++V Y IK +L++A L EM +
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544
Query: 616 PNLVTYITL 624
PN TY L
Sbjct: 545 PNRTTYDIL 553
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 194/468 (41%), Gaps = 89/468 (19%)
Query: 129 IDCVVGVLKKLNELGVAPLELFDGSG---FKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+D +V K E+ +A LE FD +G F+L C +L S E +G++E +
Sbjct: 162 VDMLVWAYVKNGEMDLA-LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV---- 216
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
KE+ ++ VN ++ I C V + F K D+V ++A+
Sbjct: 217 --YKEMIRR----RIGVNVVTFDVVINGLCKVGK-----------FQKAGDVVEDMKAWG 259
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
S P++ TIID G K+ A+ +++ ++ + N FN L++ D
Sbjct: 260 FS------PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 306 KFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
T +V++ MQ+ G+ ++ +YN L+ C G E G + G LK +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL---DEALGLQDKMSGMG-LKPNV 369
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ ++ F K + A ++ +D+ G+ PN IT+++LI+A AG ++ A L
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML G PN N L+ V C+ K L ++ +GN
Sbjct: 430 MLDTGVCPNVSTYNCLI---VGFCREGNV----------KEARKLAKEMEGN-------- 468
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K TYNIL+ A C KA L++EM
Sbjct: 469 --------------------------GLKADLVTYNILVDALCKKGETRKAVRLLDEMTL 502
Query: 542 V---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ G N +++ +LI G +E A ++L M E G+ P+ Y
Sbjct: 503 MEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
PN+ +I+ G C M ++R + +D+ + + N+ FN+L++ A +
Sbjct: 367 PNVVTYNALIN--GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M GV ++++YN L+ C GN A+++ K +E G LK D+ TY+ +
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL---AKEMEGNG-LKADLVTYNIL 480
Query: 370 VKVFADAKWWQMALKVKEDML---SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
V + A+++ ++M G N +T++ LI N G +E+A L EML+
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 540
Query: 427 AGCEPNSQCCNILLQACVE 445
G PN +IL +E
Sbjct: 541 KGLIPNRTTYDILRDEMME 559
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F KK+ L A D K +PN+ T+ID G G + + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 287 VTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +N L+ ++K ++ K M+ G+ AD+ +YNIL+ A C G T A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ E+ +E KG + ++ TY+ ++K F + + A ++ +ML G+ PN T+ L
Sbjct: 495 RLLDEMTLMEKKG-RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Query: 405 INACANAGLV 414
+ G +
Sbjct: 554 RDEMMEKGFI 563
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V+++ EM + N +++ ++I+ G + A +++ M+ G SP V+ Y T I
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ +A +L +EM +I PN +T+ L+ R ++ ++ V+++M + G
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKK---VFEEMQRQG 329
Query: 652 YKANDTYLKELIEEWC 667
+ N LI C
Sbjct: 330 LQPNVVTYNSLINGLC 345
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 188/433 (43%), Gaps = 39/433 (9%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E + V L ++ ++ LM+ A L ++ + + G+ + + LLK
Sbjct: 141 NRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLK 200
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A T +E + H ++ +VF+YS I+K D Q AL + + M
Sbjct: 201 CLCYANRT---EEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKE 257
Query: 393 G--VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G +PN + ++++I+ G +A LF EM + G +P+ N+++ A +A D
Sbjct: 258 GGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSH 501
+A + R T + Q + G G + M K K S PN V NS
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK-SRGLIPNIVICNSF 376
Query: 502 YSS-------------FDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGL 544
+S FD + KP +Y L+ ++ + + L N M++ G+
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ + + ILI A G V+ A+ I M++ G+SPDVV Y+T I R RL A
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TYLKELI 663
F +M IQPN Y ++++ +G L + ++ ++ +M G D + +I
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVS---EMINKGIPRPDIVFFNSVI 553
Query: 664 EEWC-EGVIQDKN 675
C +G + D +
Sbjct: 554 NSLCKDGRVMDAH 566
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 57/354 (16%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK ++++ M+ G++ ++ N L + C G + A EI+ + AKG K D+
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF---DSMTAKG-HKPDIV 406
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y T++ +A W+ + + M S G+ + ++ LI+A A G+V+ AM +F EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G P+ + ++ A F R RL + VA G
Sbjct: 467 QQQGVSPDVVTYSTVISA------FSRMGRLTDAMEKFNQMVARG--------------- 505
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+P T Y+ +++ C VKA L++EM
Sbjct: 506 --------------------------IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 543 GLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + + +I++ G V A I ++ + G PDV+ +T+ I ++ +
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDK 599
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
AF + + M+ ++ ++VTY TLL + G +++ L ++++M + G K N
Sbjct: 600 AFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND---GLTLFREMQRKGVKPN 650
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 38/354 (10%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKG-VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C+ LA ++ V +A V+ L V TYS ++ A+ + L + +L G
Sbjct: 128 CITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTG 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ + IT S+L+ A E+A++ L M + GC PN +I+L+ + RA
Sbjct: 188 LKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRA 247
Query: 453 FRLFRSWT----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
LF+ ++ V G +G T + ++ H+
Sbjct: 248 LDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE----------------- 290
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN+++ A C KA ++ +M T G P+ +++ +I
Sbjct: 291 ---MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A ++ + M+ G+ P++V + + + R K+A +F+ M +P++V+
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
Y TLL + G ++ + ++ M G A+ LI + + G++ D
Sbjct: 408 YCTLLHGYASEGWFADM---IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 158/405 (39%), Gaps = 44/405 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ +++ Q V+ ++ ++++++ + + T +E + M G+ + A Y+ +++ C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFC 521
Query: 336 LAGNTVLAQEIYGEV------------------------KHLEAKGVLKL--------DV 363
+ G V A+E+ E+ + ++A + L DV
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDV 581
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
T+++++ + A K+ + M GV + +T+S+L++ G + + LF E
Sbjct: 582 ITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFRE 641
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G +PN+ I+L A + A + F S T V + Y +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV-SIYGIILGGLCRNN 700
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
D+ I + + +FS T N + K K L + G
Sbjct: 701 CADEAIIL-------FQKLGTMNVKFSITILNTMINAMYKV--QRKEEAKELFATISASG 751
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ ++I G VE A + M + G+ P I++ + + +A
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ ++ +I T +L SR G HE + L + +
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYNFF 856
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR DI+F N + K ++ A +D P++ ++ID + G K+
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
I + + V +I +++L++ + + L +++ MQ+ GV + +Y I+L
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG TV A++ + E+ +E+ + + + Y I+ A+ + + + +
Sbjct: 661 LFRAGRTVAARKKFHEM--IESGTTVTVSI--YGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
V + +++INA E+A LF + +G PN +++
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 187/423 (44%), Gaps = 44/423 (10%)
Query: 262 IIDVCGIC-GDYMKSRAIYEDLRSQ-NVTLNIYVFNSL-MNVNAHDLKFTLEV-YKNMQK 317
+I C C + +K +++LR LN ++SL M++ DL F V Y+ M+
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G + M Y ++ A C G T A+ ++ + LD ++++ F
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIG----FVLDSHIGTSLLLGFCRGL 244
Query: 378 WWQMALKVKEDMLSAGVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ ALKV D++S VT PN++++S LI+ G +E+A L ++M + GC+P+++
Sbjct: 245 NLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 436 CNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+L++A + D+AF LF + + T + G DG + + + K
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ D+ F P+ TYN L+ C D V A L+ M
Sbjct: 364 K-----------------DRIF---PSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ G A+ +LK M ++G+SPD+V+Y I R + A+ L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
M + I+P+ +T+ ++ A + G L + M + G ++ LI+
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL---MLRKGISLDEVTGTTLIDG 520
Query: 666 WCE 668
C+
Sbjct: 521 VCK 523
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 179/434 (41%), Gaps = 64/434 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D PN++ +ID G+C G ++ + + + ++ +N+L
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 298 MNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N D + E+ M+K ++ ++N L++ C G A + +K +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL---LKRMLD 434
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L D+ +Y+ ++ A K+ M + P+ +T++++INA G +
Sbjct: 435 NG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A ML+ G + L+ C+ + KT+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDG---VCK------------VGKTR---------- 528
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-- 533
D + +E K I TP+ + ++L K C +VK
Sbjct: 529 -DALFILETLVKMRILTTPHSL-----------------NVILDMLSKGC-----KVKEE 565
Query: 534 -ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A++ ++ +GL P+ +++T L+D SG++ G+ +IL++M+ G P+V YT I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ R+++A L M+ + PN VTY +++ G L + L + M + GY
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL---DRALETVRAMVERGY 682
Query: 653 KANDTYLKELIEEW 666
+ ND L++ +
Sbjct: 683 ELNDRIYSSLLQGF 696
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 128/317 (40%), Gaps = 28/317 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ FN LM + + K M G+ D+ SYN+L+ C G+ A ++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + ++ D T++ I+ F +A ML G++ + +T ++LI+
Sbjct: 465 SSMNCFD----IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
G A+ + E +++ N++L + C+ + L +
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V DG + + + + K P Y I++
Sbjct: 581 VVTYTTLVDG---------------LIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + RV+ L++ M+ G+SPNH+++T+++ +G ++ AL+ ++ M E G
Sbjct: 626 LC-QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 582 DVVAYTTAIKVCVRSKR 598
+ Y++ ++ V S++
Sbjct: 685 NDRIYSSLLQGFVLSQK 701
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQ 316
T+ID G+C G + I E L + + N ++++ + K L + +
Sbjct: 516 TLID--GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---KGVLKLDVFTYSTIVKVF 373
KLG++ + +Y L+ +G +I G + LE G L +V+ Y+ I+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSG------DITGSFRILELMKLSGCLP-NVYPYTIIINGL 626
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A K+ M +GV+PN +T++ ++ N G +++A+ M++ G E N
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 434 QCCNILLQACV 444
+ + LLQ V
Sbjct: 687 RIYSSLLQGFV 697
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 182/413 (44%), Gaps = 37/413 (8%)
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
V N + +N L+NV + + LK + NM G+ D++++NIL+KA C A A
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E +E G+L D T++TI++ F + A++VKE M+ AG +T +
Sbjct: 215 ILLMEE---MEDFGLLP-DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNV 270
Query: 404 LINACANAGLVEQAMHLFEEM-LQAGCEPNSQCCNILLQACVEACQFDRAFR-------- 454
L+N G +E+A+ EEM L+ G P+ N+L+ + A
Sbjct: 271 LVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLRE 330
Query: 455 -----LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
++ +L LGE D ++ M +D T T N + ++
Sbjct: 331 GFDPDIYTYNSLISGLCKLGE-VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEE 389
Query: 510 SFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
+ K P TYN L++ C A L EM+T G P+ ++ +LID
Sbjct: 390 ATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLID 449
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ G ++ AL +LK M G + +V+ Y T I ++KR+ +A +F++M+ +
Sbjct: 450 SLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSR 509
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
N VTY TL+ + + E Q + M G + + L+ +C+
Sbjct: 510 NSVTYNTLIDGLCKSERVEEASQLM---DQMIMEGLRPDKFTYNSLLTYFCKA 559
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 179/435 (41%), Gaps = 61/435 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F V K + AL D + P++Y ++I G+C G+ ++ +
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLIS--GLCKLGEVDEAVKVLNQ 361
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N +N++++ + ++ ++ + G++ D+ +YN L++ CL+ N
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+Y K ++ KG D FTY+ ++ Q AL + ++M +G N I
Sbjct: 422 HTVAMELY---KEMKTKGC-HPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVI 477
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI+ + +A +F++M G NS N L+ ++ + + A +L
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ +P TYN
Sbjct: 538 IME-----------------------------------------------GLRPDKFTYN 550
Query: 520 ILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C D + ++ M + G P+ +++ LI +G VE A ++L+ ++
Sbjct: 551 SLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMK 610
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++ AY I+ R KR K+A LF EM P+ VTY + R + G +
Sbjct: 611 GINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG--PI 668
Query: 638 QQCLAVYQDMWKAGY 652
+ + +M + GY
Sbjct: 669 GEAVDFVMEMLERGY 683
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 142/358 (39%), Gaps = 55/358 (15%)
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y FN L+N +K LEV M + G D+ +YN L+ C G A ++ +
Sbjct: 302 YTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQ 361
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ + + TY+TI+ + A K+ + G+ P+ T++SLI
Sbjct: 362 MIERDCSP----NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLC 417
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+ AM L++EM GC P+ N+L+ + FR K Q AL
Sbjct: 418 LSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL--------CFR-------GKLQEAL- 461
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
N + S + TYN L+ C +
Sbjct: 462 -------------------------NLLKEMEVSGCAR------NVITYNTLIDGFCKNK 490
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A + ++M G+S N +++ LID S VE A Q++ M +G+ PD Y
Sbjct: 491 RIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYN 550
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ + ++ +K+A + + M +P++VTY TL+ + G + + L Q
Sbjct: 551 SLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQ 608
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 191/428 (44%), Gaps = 57/428 (13%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
+I+F N + + KK D+ A + K P + II+ G C GD+
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN--GFCKKGDFKAIDR 295
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ S+ +T+N+ V+N++++ + H +K +E + M + G D+ +YN L+
Sbjct: 296 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK-AVETIEGMIECGCKPDIVTYNTLISGS 354
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A ++ ++ KG++ + F+Y+ ++ + + A +M G
Sbjct: 355 CRDGKVSEADQL---LEQALGKGLMP-NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH 410
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+ +L++ AG V+ A+ + E+ML+ G P++ NIL+
Sbjct: 411 KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG------------ 458
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVPNSHYSSFD 506
L + + L ++ L E D QS+ T F+ N +
Sbjct: 459 LCKKFKLPAAKLLLAEMLD--------------QSVLPDAFVYATLVDGFIRNGNLDEAR 504
Query: 507 KRF------SFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDA 557
K F P YN ++K C + +K A +N M+ L+P+ +++ +ID
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCK-FGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+++GA ++ + M + P+VV YT+ I R L ++ +F EM+ + PN
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623
Query: 618 LVTYITLL 625
+VTY L+
Sbjct: 624 VVTYSILI 631
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 181/449 (40%), Gaps = 60/449 (13%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
T I V G+C G + R + ED Q NI +N+L++ D++ ++ ++
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 266
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + + +Y ++ C G+ + E + ++G L ++V Y+TI+
Sbjct: 267 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLME---MNSRG-LTVNVQVYNTIIDARYKH 322
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A++ E M+ G P+ +T+++LI+ G V +A L E+ L G PN
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ A + +DRA +W + T+ D + + + + T
Sbjct: 383 TPLIHAYCKQGGYDRA----SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR- 437
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+R F P YNILM C + K L+ EM + P+ + L
Sbjct: 438 ------EKMLERGVF-PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK------------VC--------- 593
+D +GN++ A ++ ++ E GM+P +V Y IK C
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Query: 594 --------------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V+ L A +F EM + +PN+VTY +L+ R G LH +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH---R 607
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L ++++M G N LI +C+
Sbjct: 608 SLKIFREMQACGLVPNVVTYSILIGSFCK 636
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 53/335 (15%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
++ F YS+++K+ A ++ + V E+M ++P S +I A +++GLVE+A+ L
Sbjct: 92 INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALEL 151
Query: 421 FEEMLQAGCE-PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ +L+ P+ CN LL V+ + + A +L+ + DG DR
Sbjct: 152 YYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML----------EIDGAGDRC 201
Query: 480 ----------------SNMEH-----KDKQSITNTPNFV-PNSHYSSFDKRF-------- 509
+E +D+ PN + N+ + K+
Sbjct: 202 VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGL 261
Query: 510 -------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F PT TY ++ C D+ + L+ EM + GL+ N + +IDA
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++ A++ ++ M E G PD+V Y T I R ++ +A L E+ + PN +
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
Y L+ A + G L +M + G+K +
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLI---EMTERGHKPD 413
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 22/304 (7%)
Query: 267 GICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + ++ + ++ Q+V + +V+ +L++ + +L ++++ + G+
Sbjct: 458 GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP 517
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ YN ++K C G A +K K L D FTYST++ + A
Sbjct: 518 GIVGYNAMIKGYCKFGMMKDAMACINRMK----KRHLAPDEFTYSTVIDGYVKQHDLDGA 573
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ +M+ PN +T++SLIN G + +++ +F EM G PN +IL+ +
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633
Query: 443 -CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C EA D A F ++K + D N ++ ++I+ N +
Sbjct: 634 FCKEAKLIDAA-SFFEEMLMNK---CVPNDVTFNY-LVNGFSKNGTRAISEKGNEFQENK 688
Query: 502 YSSFDKRF------SFKPTTTTYN-ILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTI 553
S F F + P + YN IL+ C +R L N+M + G P+ +S+
Sbjct: 689 QSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA 748
Query: 554 LIDA 557
L+
Sbjct: 749 LLHG 752
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMREDGMSPDVVAYT 587
+ ++ ++ MR +SP + +I+I A SG VE AL++ +++ PDV+A
Sbjct: 110 FSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACN 169
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHY-----QIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ + + V+ R++ A L++EM + N T I +++ + G L E ++ +
Sbjct: 170 SLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI-MVKGLCKEGKLEEGRKLI- 227
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE 668
+D W G N + LI+ +C+
Sbjct: 228 --EDRWGQGCIPNIIFYNTLIDGYCK 251
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 58/366 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + ++Q +GV D+ + N+L+ C + LA G++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+ T+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 135 KLG----FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V A+ LF++M G P+ L+ + ++ A L R T K
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI------- 243
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A + +
Sbjct: 244 ----------------------------------------KPDVITFNALIDAFVKEGKF 263
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L NEM + ++PN ++T LI+ G V+ A Q+ +M G PDVVAYT+
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + K++ A +F EM + N +TY TL++ + G + Q+ V+ M
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE---VFSHMVS 380
Query: 650 AGYKAN 655
G N
Sbjct: 381 RGVPPN 386
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 22/343 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H + + L ++ M+ G+ D+ Y L+ C +G A + + K +K
Sbjct: 190 NGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIK 244
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV T++ ++ F + A ++ +M+ + PN T++SLIN G V++A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F M GC P+ L+ + + D A ++F + +S+ + GNT +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF--YEMSQKGLT------GNTITYT 356
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---- 536
+ Q PN V +S R P TYN+L+ C + KALM
Sbjct: 357 TLIQGFGQ--VGKPN-VAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ G++PN ++ +L+ +G +E AL + + MR+ M ++ YT I+ +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++K A +LF + ++PN+VTY T++ R G HE
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + AL +D + + P++ + ++++ G+C G + + ++
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADSLL 235
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + KF E+Y M ++ + ++ +Y L+ C+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K A+K+ +M G+T N
Sbjct: 296 GCVDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + +A +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+M+ ++ + P T
Sbjct: 412 -----------------------DMQKREMDGVA---------------------PNIWT 427
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +MR + I++TI+I +G V+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R +A LF +MK
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 42/385 (10%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L M KLG D+ ++ L+ CL
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL- 154
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + + M + G+ P+
Sbjct: 155 GNRM--EEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M + +P+ N L+ A V+ +F A L+
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ T + G +G D M + + +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM-------------------FYLMETKG 312
Query: 510 SFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P Y L+ C C + EM GL+ N I++T LI G G A
Sbjct: 313 CF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITL 624
++ M G+ P++ Y + + ++K+A +FE+M+ + + PN+ TY L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWK 649
L G L ++ L V++DM K
Sbjct: 432 LHGLCYNGKL---EKALMVFEDMRK 453
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T N+LM C + Y + + +M +G P+ +++T LI+ +E A+ ++ M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G+ PDVV YTT I ++ + A SLF++M++Y I+P++V Y +L+ G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
+ L + M K K + LI+ + EG D + E+
Sbjct: 229 RDADSLL---RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y I++ + + AL + M+ + P+ I ++ L+N A + ++L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--ME 483
G + CN+L+ CQ + + L S+ ++ D T I+ +
Sbjct: 100 IMGVSHDLYTCNLLMNC---FCQSSQPY-LASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++++ V KP Y ++ + C + + AL ++M
Sbjct: 156 NRMEEAMSMVNQMV----------EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + +T L++ SG A +L+ M + + PDV+ + I V+ +
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
A L+ EM I PN+ TY +L+ G + E +Q
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G G ++ ++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ +K L ++++MQK GV ++ +YN+LL C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ +++ E + + K A + A+ + + S GV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK----AGKVKNAVNLFCSLPSKGVK 492
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL +A LF +M + G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 167/422 (39%), Gaps = 58/422 (13%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC----LAGNTVL--AQ 344
+FNSL++ NA D + +++ M G YNI + + C L +L A+
Sbjct: 343 LFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAE 402
Query: 345 EIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKV 372
++Y E VK + KG + D TY+ ++
Sbjct: 403 KVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVP-DASTYTKVITF 461
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
AK A + ++M GV P+ T++ LI++ AGL+EQA F+EM AGC PN
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
LL A +++ Q +A +F ++ + + G G + +
Sbjct: 522 VVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYA 581
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
K + T + + + Y + P TY L+ C A L++ M
Sbjct: 582 K----LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA 637
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PN I + L+D G ++ A ++ M + G P V YT+ I + RL A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ +M PN+VTY ++ + G E ++ L + M K G N L
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTG---ETEKALNLLSLMEKKGCSPNVVTYTAL 754
Query: 663 IE 664
I+
Sbjct: 755 ID 756
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 171/455 (37%), Gaps = 97/455 (21%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG+ G + K+ I +++ + + + ++ A + +++ M+K+GV
Sbjct: 427 LCGV-GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVK-----------------HLEAKGVLKL-DVF 364
D+ +Y IL+ + C AG AQ + E++ +L++K + + D+F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545
Query: 365 -------------TYSTIVKVFADAKWWQMALKVKEDMLSAG----------------VT 395
TYS ++ A Q A +V ++ ++
Sbjct: 546 HRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTIS 605
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+ +L+N A V A L + ML AGCEPN + L+ + + D A +
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F L T+ T I M + + S + S P
Sbjct: 666 F----LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA--------MKVLSQMLKDSCNPNV 713
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ C KAL ++ M G SPN +++T LID G +G V+ L++
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQ 773
Query: 574 MREDGMSPDVVAYTTAIKVCVR---------------------------------SKRLK 600
M+ G +P+ V Y I C SKR
Sbjct: 774 MKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFL 833
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ L EEM+ + P Y L+ + S+ G L
Sbjct: 834 ASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 147/389 (37%), Gaps = 101/389 (25%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CCL G A E G +K + TY+ +V+V A A +MA +V++
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFG----YRPSAVTYNALVQVLASAGQVEMAFRVQK 228
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M ++G + T S A G A+ L E + + ++ C ++ +EA
Sbjct: 229 EMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLMEAS 285
Query: 448 QFDRA------------------FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
F+ A +R + L K Q+ G RI NM
Sbjct: 286 LFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQL-------GWCKRIINM------M 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+T N P+ + +N L+ C DY L N M T G P
Sbjct: 333 MTEGCN-----------------PSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375
Query: 548 HISWTILIDA-CG----------------------------------------GSGNVEG 566
++ + I I + CG G G E
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A QI+K M G PD YT I ++KR+ +AF LF+EMK + P++ TY L+
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + G + + Q + + +M AG N
Sbjct: 496 SFCKAGLIEQAQ---SWFDEMRSAGCSPN 521
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 166/404 (41%), Gaps = 65/404 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SPN+ +++ G+C S A + + + + N V+++L++ ++
Sbjct: 605 SPNVVTYGALVN--GLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSA 662
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV+ M K G + + +Y L+ G LA ++ ++ K +V TY+
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSCNPNVVTYTA 718
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V + AL + M G +PN +T+++LI+ AG V+ + LF +M G
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN IL+ C A G D + + KQ
Sbjct: 779 CAPNYVTYRILINHCCAA---------------------------GLLDDAHLLLDEMKQ 811
Query: 489 SITNTPNFVPN--SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
T+ P ++ + F KRF L+ EM + +P
Sbjct: 812 --THWPKYLQGYRTTVQGFSKRF--------------------LASLGLLEEMESHDTAP 849
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAF 603
+ +LID+ +G +E AL++ K M E S ++ + +T+ I+ S ++++A
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE-VQQCLAVYQD 646
+L+ EM+ I P+L ++ L++ +E +Q C + Q+
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQE 953
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ ++D G+C G+ K+ + + + + N+ + +L
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVD--GLCKTGETEKALNLLSLMEKKGCSPNVVTYTAL 754
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + LE++ M+ G + +Y IL+ CC AG A + E+K
Sbjct: 755 IDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW 814
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y T V+ F+ K + +L + E+M S P + LI++ + AG +E
Sbjct: 815 PKYLQ----GYRTTVQGFS--KRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Query: 416 QAMHLFEEMLQAGCEPNSQCCNI---LLQACVEACQFDRAFRLF 456
A+ L +EM++ N ++ L+QA + Q + A L+
Sbjct: 869 TALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALY 912
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 200/475 (42%), Gaps = 74/475 (15%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKN 314
+ RT++DV G ++ + +++R +++ V +LM ++ L ++K
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
K G++ Y +L++ C G T Q+ Y + + +G+L F S ++K
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMT---QKAYELCRQMTGQGLLP-STFELSLVLKGLL 378
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + W+ A+ + E+M +G+ P+ T+++LI+ A + +A++LF+ M +AG +P+
Sbjct: 379 NDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Query: 435 CCNILLQA-CVEACQFDRAFRLFRSW-------------TLSKTQVALGEDYDGNTDRIS 480
N LL C + C D A +L+ TL + +A +D+D +
Sbjct: 438 TYNSLLMGYCKKGC-MDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA-KKDFDNAYALLD 495
Query: 481 NMEHKDKQSITNTPNFVPNS--------HYSSFDKRF---SFKPTTTTYNI--------- 520
M+ T N + N K F F PT TYN
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555
Query: 521 LMKACCTDYYRVK----------------------------ALMNEMRTVGLSPNHISWT 552
+M + T Y +++ ++N++R GL P+ +++
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI+ GN+ ALQ+L I+ +DG++P+ V Y + I +K+ +E M
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
I + TY TL+ S+ G+ V L +Y +M GY + L C
Sbjct: 676 GIVADTSTYTTLIDGFSKDGN---VAFALELYSEMMAKGYIPDAFTFTALTHGLC 727
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 30/411 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ N + + L AL +D KK P++ +++ G C G ++ +Y +
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL--MGYCKKGCMDEAVKLYSE 461
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N+ + +LM + D + M++ GV + +YN+L+ C+
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
E+ G +K ++G + + TY++I+ F A A V + M G+ PN I
Sbjct: 522 VC---EVDGMLKSFMSEGFIPT-MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++S I+ G + A+ + ++ + G +P+ N L+ + A +L
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL--- 634
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTT 516
+ L + NT +++ IT N S F + + T+
Sbjct: 635 -----VILLKDGLAPNTVVYNSL-------ITGYKNLNMMKEVSKFYESMIKGGIVADTS 682
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ D AL +EM G P+ ++T L SG+++GA ++L+ M
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R + P+V Y I +R +L++AF L +EM + IQP+ TY L+
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 50/339 (14%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+ A+GV+ D+ + + ++ A + AL + +M G + + +L++AC
Sbjct: 147 HMVARGVVP-DIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---------LS 462
G+ E A+ LF+EM A +P+ + + + A + RA R+ R
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265
Query: 463 KTQVALGEDYDGNTDRIS-----NMEHKD-------------------KQSITNTPNFVP 498
+T V D T R+ N E +D +Q + N N
Sbjct: 266 RTMV----DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
+ + PT Y +L++ C KA L +M GL P+ ++++
Sbjct: 322 ETL------KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLK 375
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ A+ + + M + G+ PDV Y I ++ +L++A +LF+ MK ++P
Sbjct: 376 GLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ TY +LL + G + E + +Y +M G+K N
Sbjct: 435 SINTYNSLLMGYCKKGCMDEA---VKLYSEMPMEGFKPN 470
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
++ LM AC + A L +EM + P+ + + I A G+ AL++L+ M+
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G Y T + V V++ R+++A + +EM+ + +++ TL+R Y
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRG---YCLRQ 311
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQ 690
EV L ++++ K G LI C+ V Q LCR+ Q
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLI-RGCDQV----GMTQKAYELCRQMTGQ 361
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE + + + + +L++ + D + F LE+Y M G + D ++ L C
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G+ A+++ E++ L+ ++ +VF Y+ ++ + Q A ++ ++ML+ G+
Sbjct: 728 RSGDIDGAKKLLEEMRRLD----VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQ 783
Query: 396 PNTITWSSLIN 406
P+ T+ L++
Sbjct: 784 PDDTTYDILVS 794
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 185/406 (45%), Gaps = 39/406 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ TIID GD K+ Y ++ + V+ + +NS++ A + +EV
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M VM + +YN ++ C +G +++ G + + + G+ + DV TY++++
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQ---SEKAIGIFRKMCSDGI-EPDVVTYNSLMD 120
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A K+ + M+ G+ P+ T+ +L++ A+ G + + L M+Q G +
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGN------TDRISNM 482
+ NIL+ A + + D +F R L+ V DG D + N
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 483 EHKDKQSITNTPNFVPNSH-------YSSFDK---------RFSFKPTTTTYNILMKACC 526
E + +T PN V + Y ++K P +N ++ + C
Sbjct: 241 EQMIDKGLT--PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298
Query: 527 TDYYRV--KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + K L + + +G++P+ I+++ LID +G ++GA+++L M G+ PD V
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
Y+T I + R++ A +LF+EM+ + P+++TY +L R
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 24/397 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN + +I+ G C G K+ I+ + S + ++ +NSLM+ + K T
Sbjct: 75 PNCFTYNSIMH--GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ +M K G+ D+ +Y LL G V ++ L + ++LD ++ +
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA----LMVQNGMQLDHHVFNIL 188
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + V M G+TPN + + ++I+ G ++ AM FE+M+ G
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ A C +D+ W K + + E D + + S
Sbjct: 249 TPNVVVYTSLIHA---LCTYDK-------W--EKAEELIFEILDQGINPNIVFFNTILDS 296
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + + P TY+ L+ C A L+ M +VGL P+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LI+ +E AL + K M +G++PD++ Y + R++R A L+
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+ Q L TY +L ++ SL C Y
Sbjct: 417 RITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRTY 453
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 24/257 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+IL C + ++ +K D V + + ++ +PN RT+ID G+C G +
Sbjct: 186 NILICAYTKQ--EKVDEV--VLVFSKMRQQGLTPNAVNYRTVID--GLCKLGRLDDAMLN 239
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL-------GVMADMASYNILL 331
+E + + +T N+ V+ SL+ H L T + ++ ++L G+ ++ +N +L
Sbjct: 240 FEQMIDKGLTPNVVVYTSLI----HAL-CTYDKWEKAEELIFEILDQGINPNIVFFNTIL 294
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G + +++++ + H+ GV DV TYST++ + A A+K+ M+S
Sbjct: 295 DSLCKEGRVIESKKLFDLLGHI---GV-NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS 350
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+++T+S+LIN +E A+ LF+EM G P+ NI+L +
Sbjct: 351 VGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAA 410
Query: 452 AFRLFRSWTLSKTQVAL 468
A L+ T S TQ+ L
Sbjct: 411 AKELYARITESGTQLEL 427
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+++ D+R S P TYN ++ A +A+ E+ TV + PN ++ ++
Sbjct: 33 TYHEMLDRRVS--PDAVTYNSIIAALSKAQAMDRAM--EVLTVMVMPNCFTYNSIMHGYC 88
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG E A+ I + M DG+ PDVV Y + + ++ + +A +F+ M ++P++
Sbjct: 89 SSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDIT 148
Query: 620 TYITLLRARSRYGSLHEVQQCLAV 643
TY TLL + G+L E+ LA+
Sbjct: 149 TYGTLLHGYASKGALVEMHDLLAL 172
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 62/445 (13%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P A +++ + +R F G+K D + Y+ + SP++ + T +D G+
Sbjct: 511 IPNA-VVYTSLIRNFFKCGRKED---GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K RA+++++++ + + L++ V A E++ M++ G + D +YN ++
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G A ++ E+K KG + V TY +++ A A + E+ S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMK---TKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ N + +SSLI+ G +++A + EE++Q G PN N LL A V+A +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F+S + + TPN++
Sbjct: 743 ALVCFQSM----------------------------KDLKCTPNYI-------------- 760
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TY+IL+ C + + EM+ G PN ++T +I +GN+ A
Sbjct: 761 -----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +E G D Y I+ + R A+ LFEE + T + LL +
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKA 654
+ + + AV ++ KA + A
Sbjct: 876 KAECIEQAAIVGAVLRETAKAQHAA 900
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 192/446 (43%), Gaps = 42/446 (9%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ + +AL D K + P++ + ID G G + + ++
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEM 296
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + L+ + S++ V A L +E++++M + + +YN ++ +AG
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ KG + V +Y+ I+ ALK E+M + PN T
Sbjct: 357 ---EDAYSLLERQRRKGCIP-SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
++ +I+ AG +E A+ + + M AG PN NI++ +A + D A +F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471
Query: 457 ----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R ++ + G G D + ++ PN V Y+S + F FK
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKL-YEQMLDANQIPNAVV---YTSLIRNF-FK 526
Query: 513 -----PTTTTYNILMKACCT-----------------DYYRVKALMNEMRTVGLSPNHIS 550
YN +++ C+ + + +AL E++ +G P+ S
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+TILI +G A ++ M+E G D AY T I +S ++ +A+ L EEMK
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+P +VTY +++ ++ L E
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDE 672
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 190/452 (42%), Gaps = 40/452 (8%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D S L + ++ P++ I+ G G ++ +E+++ + N+
Sbjct: 354 GKFEDAYSLL---ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NL 409
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N ++++ A L+ L V M+ G+ ++ + NI++ C A A I+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ H + D TY ++++ A K+ E ML A PN + ++SLI
Sbjct: 470 LDH----KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------R 457
G E ++ EML+ GC P+ N + +A + ++ LF R
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 458 SWT-LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV---------PNSHYSSFD- 506
S+T L V G ++ + M+ + T N V N Y +
Sbjct: 586 SYTILIHGLVKAGFAHEA-YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K +PT TY ++ +A M E ++ G+ N + ++ LID G G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A I++ + + G++P+V + + V+++ + +A F+ MK + PN +TY
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ + + + + +Q+M K G+K N
Sbjct: 765 LIHGLCK---IRKFNKAFVFWQEMQKQGFKPN 793
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 147/367 (40%), Gaps = 57/367 (15%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ D L +++ MQ+LG ++ + L++ G A + E+K L+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK----SNSLEP 268
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV Y+ + F A MA K +M + G+ + +T++S+I A + +A+ LF
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
E M Q P + N ++ A +F+ A+ L
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER----------------------- 365
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+R P+ +YN ++ +AL EM
Sbjct: 366 ------------------------QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + PN ++ I+ID +G +E AL + M++ G+ P+V+ + +++RL
Sbjct: 402 KKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A S+FE + H +P+ VTY +L+ R+G + E + +Y+ M A N
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK---LYEQMLDANQIPNAVVY 517
Query: 660 KELIEEW 666
LI +
Sbjct: 518 TSLIRNF 524
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 197/461 (42%), Gaps = 35/461 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+K + AL+ ++ KK + PN+ +ID+ G + + + ++ + N
Sbjct: 385 LGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N +++ A L +++ + D +Y L++ G A ++Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L+A + + Y+++++ F + K+ +ML G +P+ + ++ ++
Sbjct: 504 QM--LDANQIP--NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------T 460
AG +E+ LF+E+ G P+++ IL+ V+A A+ LF + T
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF--- 511
+ V G G ++ + M+ K + T V + + D+ +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 512 -KPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K N+++ + D + +M E+ GL+PN +W L+DA +
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL + M++ +P+ + Y+ I + ++ +AF ++EM+ +PN+ TY T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++ ++ G++ E +++ + G A+ +IE
Sbjct: 800 MISGLAKAGNIVEAD---TLFEKFKEKGGVADSAIYNAIIE 837
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A ++ +K N+ I ++ID G G ++ I E+L + +T N+Y +N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ V A ++ L +++M+ L + +Y+IL+ C A + E++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ--- 786
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K K +VFTY+T++ A A A + E G ++ ++++I +NA
Sbjct: 787 -KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEAC--------QFDRAFRLFRSWT 460
A LFEE GC ++ C +LL + C+E + +A RSWT
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
++ F+P + Y L+ A T D + L +M+ +G + N +T LI G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + + PDVV Y I ++ ++ A+ F EMK + + VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 625 LRARSRYGSLHE 636
+ + L+E
Sbjct: 312 IGVLCKADRLNE 323
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ MR + P ++T LI A S + + L + + M+E G + +V +TT I+V
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R R+ A SL +EMK ++P++V Y + +G +V + +M G
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC---FGKAGKVDMAWKXFHEMKANGLVL 303
Query: 655 NDTYLKELIEEWCEG 669
+D +I C+
Sbjct: 304 DDVTYTSMIGVLCKA 318
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 197/463 (42%), Gaps = 54/463 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I + ++R E++ ++N+T N+ + L++ + + +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K V +YN L+ C A A E Y ++ + G + D+FTY+T++
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAER---ASEAYDLLEEMVYSGCIP-DIFTYTTLIT 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CE 430
F +K AL+V E +++ G P+ +T+S LI+ G +++A+ LF M+++G C
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNTDR 478
PN+ N L+ + D A L + T L + D D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 479 ISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTTTYNILM 522
++ M K TP+ V + H +R S PT TYN ++
Sbjct: 279 LNQMTRKGL-----TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + + PN +S+ I+I A+++++ R +PD
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEV---- 637
VV YTT I R K++ +A ++ +M + PN +TY TL+ G L
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI 453
Query: 638 -QQC---LAVYQDMWKAGYKAN-DTYLKELIEEWCE---GVIQ 672
+ C + Y + A KAN D +EL+++ + GV+Q
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQ 496
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 117/310 (37%), Gaps = 54/310 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+++++ K + AL M+S G P+ T++++I+A + +A
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EEM PN +L+ + + D A L +S
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL-----------------------LSK 106
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M K PT TYN L+ C +A L+ EM
Sbjct: 107 MRKK-------------------------CVPTAVTYNSLISGLCKAERASEAYDLLEEM 141
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ ++T LI S + AL++ + + G PDVV Y+ I + RL
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201
Query: 600 KQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
K+A LF M K PN VTY +L+ R G + E L + M + G +
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL---ERMAETGSSPDVVT 258
Query: 659 LKELIEEWCE 668
L+ +C+
Sbjct: 259 YTTLMNGFCK 268
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 164/424 (38%), Gaps = 73/424 (17%)
Query: 240 ALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
A AYD ++ + S P+++ T+I G C A ++E L ++ ++ +
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLIT--GFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L++ LK ++++ M K G M + +YN L+ C G A + +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ DV TY+T++ F A + M G+TP+ +T++SL++
Sbjct: 249 ETGSSP----DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+H+ EM + C P N +L A Q + A R + L +
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCP---- 356
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
P ++NI+++ C
Sbjct: 357 -----------------------------------------PNVVSFNIMIRGLCKVNRS 375
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTT 588
+A L+ E R +P+ + +T +ID V+ A ++ K++ E G P+ + Y+T
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ + L +A E+ PN+ TY L+ A + + ++ L DM
Sbjct: 436 LVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL---DDMV 488
Query: 649 KAGY 652
+ G+
Sbjct: 489 QRGF 492
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S + +++T LI +E AL L M G PDV YT I RL +A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
EEM + + PN+VTY L+ + G + E +A+ M K TY LI
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA---VALLSKMRKKCVPTAVTY-NSLIS 123
Query: 665 EWCEG 669
C+
Sbjct: 124 GLCKA 128
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 62/445 (13%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P A +++ + +R F G+K D + Y+ + SP++ + T +D G+
Sbjct: 511 IPNA-VVYTSLIRNFFKCGRKED---GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K RA+++++++ + + L++ V A E++ M++ G + D +YN ++
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G A ++ E+K KG + V TY +++ A A + E+ S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMK---TKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ N + +SSLI+ G +++A + EE++Q G PN N LL A V+A +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F+S + + TPN++
Sbjct: 743 ALVCFQSM----------------------------KDLKCTPNYI-------------- 760
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TY+IL+ C + + EM+ G PN ++T +I +GN+ A
Sbjct: 761 -----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +E G D Y I+ + R A+ LFEE + T + LL +
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKA 654
+ + + AV ++ KA + A
Sbjct: 876 KAECIEQAAIVGAVLRETAKAQHAA 900
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 192/446 (43%), Gaps = 42/446 (9%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ + +AL D K + P++ + ID G G + + ++
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM 296
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + L+ + S++ V A L +E++++M + + +YN ++ +AG
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ KG + V +Y+ I+ ALK E+M + PN T
Sbjct: 357 ---EDAYSLLERQRRKGCIP-SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
++ +I+ AG +E A+ + + M AG PN NI++ +A + D A +F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471
Query: 457 ----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R ++ + G G D + ++ PN V Y+S + F FK
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKL-YEQMLDANQIPNAVV---YTSLIRNF-FK 526
Query: 513 -----PTTTTYNILMKACCT-----------------DYYRVKALMNEMRTVGLSPNHIS 550
YN +++ C+ + + +AL E++ +G P+ S
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+TILI +G A ++ M+E G D AY T I +S ++ +A+ L EEMK
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+P +VTY +++ ++ L E
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDE 672
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 190/452 (42%), Gaps = 40/452 (8%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D S L + ++ P++ I+ G G ++ +E+++ + N+
Sbjct: 354 GKFEDAYSLL---ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NL 409
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N ++++ A L+ L V M+ G+ ++ + NI++ C A A I+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ H + D TY ++++ A K+ E ML A PN + ++SLI
Sbjct: 470 LDH----KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------R 457
G E ++ EML+ GC P+ N + +A + ++ LF R
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 458 SWT-LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV---------PNSHYSSFD- 506
S+T L V G ++ + M+ + T N V N Y +
Sbjct: 586 SYTILIHGLVKAGFAHEA-YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K +PT TY ++ +A M E ++ G+ N + ++ LID G G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A I++ + + G++P+V + + V+++ + +A F+ MK + PN +TY
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ + + + + +Q+M K G+K N
Sbjct: 765 LIHGLCK---IRKFNKAFVFWQEMQKQGFKPN 793
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 147/367 (40%), Gaps = 57/367 (15%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ D L +++ MQ+LG ++ + L++ G A + E+K L+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK----SNSLEP 268
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV Y+ + F A MA K +M + G+ + +T++S+I A + +A+ LF
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
E M Q P + N ++ A +F+ A+ L
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER----------------------- 365
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+R P+ +YN ++ +AL EM
Sbjct: 366 ------------------------QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + PN ++ I+ID +G +E AL + M++ G+ P+V+ + +++RL
Sbjct: 402 KKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A S+FE + H +P+ VTY +L+ R+G + E + +Y+ M A N
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK---LYEQMLDANQIPNAVVY 517
Query: 660 KELIEEW 666
LI +
Sbjct: 518 TSLIRNF 524
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 197/461 (42%), Gaps = 35/461 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+K + AL+ ++ KK + PN+ +ID+ G + + + ++ + N
Sbjct: 385 LGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N +++ A L +++ + D +Y L++ G A ++Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L+A + + Y+++++ F + K+ +ML G +P+ + ++ ++
Sbjct: 504 QM--LDANQIP--NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------T 460
AG +E+ LF+E+ G P+++ IL+ V+A A+ LF + T
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF--- 511
+ V G G ++ + M+ K + T V + + D+ +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 512 -KPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K N+++ + D + +M E+ GL+PN +W L+DA +
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL + M++ +P+ + Y+ I + ++ +AF ++EM+ +PN+ TY T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++ ++ G++ E +++ + G A+ +IE
Sbjct: 800 MISGLAKAGNIVEAD---TLFEKFKEKGGVADSAIYNAIIE 837
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A ++ +K N+ I ++ID G G ++ I E+L + +T N+Y +N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ V A ++ L +++M+ L + +Y+IL+ C A + E++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ--- 786
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K K +VFTY+T++ A A A + E G ++ ++++I +NA
Sbjct: 787 -KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEAC--------QFDRAFRLFRSWT 460
A LFEE GC ++ C +LL + C+E + +A RSWT
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
++ F+P + Y L+ A T D + L +M+ +G + N +T LI G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + + PDVV Y I ++ ++ A+ F EMK + + VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 625 LRARSRYGSLHE 636
+ + L+E
Sbjct: 312 IGVLCKADRLNE 323
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ MR + P ++T LI A S + + L + + M+E G + +V +TT I+V
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R R+ A SL +EMK ++P++V Y + +G +V + +M G
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC---FGKAGKVDMAWKFFHEMKANGLVL 303
Query: 655 NDTYLKELIEEWCEG 669
+D +I C+
Sbjct: 304 DDVTYTSMIGVLCKA 318
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 173/413 (41%), Gaps = 65/413 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++++ + DL +++ MQK G+ AD ++ L+ C
Sbjct: 344 VLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLC 403
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A + E + KG L +DV TY+ ++ + A +V +M+ V
Sbjct: 404 RAGELKEADRVLQE---MVDKG-LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA 459
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ + ++A R+
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ ME ++
Sbjct: 520 -----------------------MTEMEAAGHRT------------------------DV 532
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+ C ++ R ++ EM G+ P+ ++ +L++ SG VEG ++L+
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+VV Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELI------EEWCEG-VIQDKNQNQG 679
+ E L +Q+M + G + + LI +++ E V DK +N+G
Sbjct: 653 MKEA---LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 170/393 (43%), Gaps = 26/393 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
A++ +L +NV + + +L++ A LK + ++ ++ D+ +Y ++ C+
Sbjct: 245 ALFRELPDKNVCSHNILLKALLS--AGRLK---DACQHFDEMSSPPDVVTYGTMVHGYCV 299
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E + AKG L+ + Y++++ + + AL+V EDM GV
Sbjct: 300 RGELENAVKLLDE---MAAKG-LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVAL 355
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + ++++I+ + G + A LFEEM + G + L+ A + A R+
Sbjct: 356 DAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVL 415
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ V G D D T + + + ++ H +R + P
Sbjct: 416 QEM------VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV----HNEMVGRRVA--PNVV 463
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L C D L++EM GL N ++ LI+ GN+E A++I+ M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G DV YTT I +S +A ++ +EM I+P++ TY L+ G +
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ L + M + + N L++++C
Sbjct: 584 EGGKKLL---EWMLEKNVRPNVVTYNSLMKQYC 613
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 158/425 (37%), Gaps = 103/425 (24%)
Query: 190 ELDEEFRIVQLCVNKP-DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
EL E R++Q V+K DV++ + + + + K+ ++V A R ++
Sbjct: 407 ELKEADRVLQEMVDKGLDVDV------------VTYTVLIDGYCKRGNMVEAFRVHNEMV 454
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK 306
+PN+ + D G+C GD + + ++ ++ + LN+Y +NSL+N
Sbjct: 455 GRRVAPNVVTYTALSD--GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLIN------- 505
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
C GN A I E +EA G + DV+TY
Sbjct: 506 --------------------------GLCKFGNLEQAMRIMTE---MEAAG-HRTDVYTY 535
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + A + ++ML G+ P+ T++ L+N +G VE L E ML+
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE 595
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
PN N L+ + + + K + E Y G M ++
Sbjct: 596 KNVRPNVVTYNSLM----------------KQYCIDKNMKSTTEIYKG-------MHSQE 632
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGL 544
P TYNIL+K C +AL EM GL
Sbjct: 633 ------------------------VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S++ LI A MR +G++ + Y+ + + L+ +
Sbjct: 669 RLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTIT 728
Query: 605 LFEEM 609
L +E+
Sbjct: 729 LCDEL 733
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
FD+ S P TY ++ C + L++EM GL N +T +I G
Sbjct: 278 FDE-MSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKG 336
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V AL++L+ M G++ D V +TT I L A LFEEM+ + + VT+
Sbjct: 337 QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHT 396
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ R G L E + V Q+M G + LI+ +C+
Sbjct: 397 ALINGLCRAGELKEADR---VLQEMVDKGLDVDVVTYTVLIDGYCK 439
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 200/462 (43%), Gaps = 66/462 (14%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+N RY+ V +++ N +R KK DL L +D ++ SP+ Y T+I
Sbjct: 124 INEVARYSPSVFAYNVVLRNVLR--AKKWDLAHGL--FDEMRQRALSPDRYTYSTLITSF 179
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADM 324
G G + +S + + V+ ++ ++++L+ ++ D + ++ +++ G+ D+
Sbjct: 180 GKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDL 239
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YN ++ G L +E V + GVL D +YST++ V+ + + + AL
Sbjct: 240 VAYNSMINVF---GKARLFREARMLVHEMREVGVLP-DTVSYSTLLSVYVENEKFVEALS 295
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V +M A + + +T + +I+ +V++A LF M + G EPN N LL+
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYG 355
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
EA F A LFR M+ K+
Sbjct: 356 EAELFGEAIHLFRL-----------------------MQRKE------------------ 374
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
+ TYN ++K KA L+ EM+ G+ PN I+++ +I G +G
Sbjct: 375 ------IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAG 428
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A + + +R G+ D V Y T I R+ + A L ++K P+++
Sbjct: 429 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKC----PDIIPRD 484
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
T ++ +R G +++ V++ + AG + + + +IE
Sbjct: 485 TAIKILARAG---RIEEATWVFRQAFDAGEVKDISVFRCMIE 523
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 49/325 (15%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VF Y+ +++ AK W +A + ++M ++P+ T+S+LI + AG+ ++++ +
Sbjct: 134 VFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQ 193
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M Q + + L++ + C + +A +F L ++ +
Sbjct: 194 QMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMR--LKRSGI---------------- 235
Query: 483 EHKDKQSITNTPNFVP-NSHYSSFDKRFSFK---------------PTTTTYNILMKACC 526
TP+ V NS + F K F+ P T +Y+ L+
Sbjct: 236 ----------TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYV 285
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ V+AL EM S + ++ I+ID G V+ A ++ MR+ G+ P+VV
Sbjct: 286 ENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVV 345
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T +KV ++ +A LF M+ +I+ N+VTY T+++ YG E ++ +
Sbjct: 346 SYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI---YGKSLEHEKATNLV 402
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
Q+M K G + N +I W +
Sbjct: 403 QEMQKRGIEPNAITYSTIISIWGKA 427
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 221 DILFCNFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D++ CN + + + D+V A R + + +K PN+ T++ V G + ++ ++
Sbjct: 308 DLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLF 367
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + + N+ +N+++ + L+ + + MQK G+ + +Y+ ++ A
Sbjct: 368 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKA 427
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + L + GV ++D Y T++ + A A ++ D+ P+
Sbjct: 428 GKLDRAAMLF---QKLRSSGV-EIDQVLYQTMIVAYERAGLVAHAKRLLHDL----KCPD 479
Query: 398 TITWSSLINACANAGLVEQA-----------------------------------MHLFE 422
I + I A AG +E+A + +FE
Sbjct: 480 IIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFE 539
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+M AG P+S ++L A + +F++A ++R
Sbjct: 540 KMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYR 574
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 60/399 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ S+ + L+ + +L+ + A +
Sbjct: 101 TPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASS 160
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ C AG A I+ K +EA+G+ +V YS ++
Sbjct: 161 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF---KSMEARGLAPNEV-VYSALI 216
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G V A F+EML+AGC+
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ +A GNTD + D S
Sbjct: 277 PDVYTYNILISGFCKA---------------------------GNTDAACGV-FDDMSSS 308
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
+PN V TY L+ C KA + M+ G P+
Sbjct: 309 RCSPNVV-------------------TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDS 349
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+D SG +EG + M G++ +C ++ R+ +A SLF
Sbjct: 350 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC-KANRVDEAVSLFNA 408
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + P+ Y +++ A + G ++E Q AVYQ+M
Sbjct: 409 IRK-EGMPHPYAYNSIISALIKSGKVNEGQ---AVYQEM 443
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 32/407 (7%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMAS 326
G +++ ++ ++ + T++I+ + ++++ A + K E M+K+ G +A+
Sbjct: 13 GMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQ-EAVALMEKITANGCTPTIAT 71
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN LL C G +E ++ + G DV TY++++ K A K+
Sbjct: 72 YNALLNGLCKMGRL---EEAIDLLRKIVDNGCTP-DVVTYTSLIDGLGKKKRSFEAYKLF 127
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++M S G+ +T+ +++LI AG + QA +++ M GC P+ + ++ +A
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187
Query: 447 CQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ A R+F+S L+ +V Y + D +
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVV----YSALIHGLCKARKMD----------CALEMLA 233
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K F P T TYNIL+ C D +A +EM G P+ ++ ILI +
Sbjct: 234 QMKKAFC-TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKA 292
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN + A + M SP+VV Y T I + ++L +A ++ MK P+ Y
Sbjct: 293 GNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVY 352
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+L+ + G L C+ ++ +M ++G AN LI C+
Sbjct: 353 SSLVDGLCKSGKLE--GGCM-LFDEMERSGV-ANSQTRTRLIFHLCK 395
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 164/421 (38%), Gaps = 85/421 (20%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + LAK+ +++E ++E + + G A+ +L +G+ K GR++ +
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKIT-ANGCTPTIATYNAL---LNGLCKM---GRLEEAI 89
Query: 134 GVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEVEMFVGLMEV 180
+L+K+ + G P L DG G +KL K R L V + +
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDV----------------NLAIR-YACIVPRA--- 220
L+ ++P + Q CV PDV A+R + + R
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 221 -DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
++++ + K R + AL KK +P+ +ID G+C GD +RA
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID--GLCKSGDVAAARA 265
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ M + G D+ +YNIL+ C A
Sbjct: 266 FFDE---------------------------------MLEAGCKPDVYTYNILISGFCKA 292
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GNT A ++ ++ +V TY T++ + A + M G P+
Sbjct: 293 GNTDAACGVFDDMSSSRCSP----NVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +SSL++ +G +E LF+EM ++G NSQ L+ +A + D A LF
Sbjct: 349 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFN 407
Query: 458 S 458
+
Sbjct: 408 A 408
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ILI+ +G + A + + +G + D+ YTT + ++K++++A +L E++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
P + TY LL + G L E
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEE 87
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 203/492 (41%), Gaps = 70/492 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIY 279
DIL ++RE G +D +L + + +P++Y C I+ + C D + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSIVKSCED-VSVWSFL 181
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLA 337
+++ + + ++ FN L+NV + F Y + M+K G + +YN +L C
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A E+ + H+ KGV DV TY+ ++ + + DM + PN
Sbjct: 242 GRFKAAIEL---LDHMNLKGV-NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L+N +N G V A L EML G PN N L+ + F A ++F
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ L T+V+ G DG + F + KR
Sbjct: 358 MMEAKGLIGTEVSYGVLLDG---------------LCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY ++ C + + +A ++NEM G+ P+ ++++ LI+ G ++ A +I+
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVC 462
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-------KHYQ------------ 613
+ G+SP+ + Y+T I C R LK+ ++E M H+
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAG 522
Query: 614 ----------------IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
I PN V++ L+ YGS E + +V+ +M K G+
Sbjct: 523 KVAEAEEFMRCMTSDGILPNAVSFDCLING---YGSSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 658 YLKELIEEWCEG 669
L++ C+G
Sbjct: 580 TYGSLLKGLCKG 591
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 186/430 (43%), Gaps = 43/430 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M GV AD+ +YN+L+ C + + + +++ K ++ + TY+T++
Sbjct: 251 LDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR----KRMIHPNEVTYNTLLN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +ML+ G++PN +T+++LI+ + G ++A+ +F M G
Sbjct: 307 GFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIG 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 TEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F + R P Y+ L+ CC
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G +P+H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L ++
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600
Query: 641 LAVYQDMWKA 650
L Q++ A
Sbjct: 601 LKSLQNVPAA 610
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 169/437 (38%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P A C + +G + + A +D K P + +++ G+C G +
Sbjct: 539 ILPNAVSFDC-LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLI 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + L++ ++ + N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 AAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G L + Y+ V A W+ ++ M
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDK 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+T + +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS LS +P+
Sbjct: 773 SFMLYRSMILS--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T Y+I++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDM 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ +M G+S D + V R+ R +++ + EM I P YI LL R
Sbjct: 847 VNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 165/440 (37%), Gaps = 42/440 (9%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N LK E+ + ++G+
Sbjct: 412 GLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSP 471
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G IY E LE D FT++ +V A A
Sbjct: 472 NGIIYSTLIYNCCRMGCLKETIRIY-EAMILEGN---TPDHFTFNVLVTSLCKAGKVAEA 527
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PN +++ LIN ++G +A +F+EM + G P LL+
Sbjct: 528 EEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ A + +S T+ + GN D+ ++
Sbjct: 588 LCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSL------------ 635
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISW 551
+ +R S P + TY L+ C V A++ E G L PN + +
Sbjct: 636 -------FGEMVQR-SILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T +D +G + + M + G++ DVV I R ++++ L EM +
Sbjct: 688 TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
PNL TY LL Y V +Y+ M +G + +I CE +
Sbjct: 748 QNQGPNLTTYNILLHG---YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNM 804
Query: 672 QDKNQNQGEVTLCRRTNSQR 691
+ + +CR R
Sbjct: 805 LEIGLKILKAFICRGVEVDR 824
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 154/354 (43%), Gaps = 23/354 (6%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M KLG+ D+ + N ++ G ++ E+ + + +G ++ TY+ ++
Sbjct: 708 QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN-QNQGP---NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + M+ +G+ P+ +T S+I + ++E + + + + G E +
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-DRISNMEHKDKQSIT 491
N+L+ C + + AF + T +LG D NT D I ++ +++ +
Sbjct: 824 RHTFNMLISKCCANGEINWAFDMVNVMT------SLGISLDKNTCDAIVSVLNRNHR--- 874
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
F + + P + Y L+ C D + EM + P ++
Sbjct: 875 ----FQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ + ++ A G + A +L+ M + + P + ++TT + + ++ + +A L M
Sbjct: 931 AESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVM 990
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ +LV+Y L+ G ++ ++++M + G+ AN T K L+
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKG---DMAIAFELFEEMKRDGFLANVTTYKALV 1041
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 57/290 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ V + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDM---VNVMTSLGI-SLDKN 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T IV V +Q + V +M G++P + + L+N G ++ A + EEM
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L RS
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEASLLLRSML------------------------ 956
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
+ PT ++ LM C + +AL E+R V
Sbjct: 957 -----------------------KMKLVPTIASFTTLMHLFCKNGNVTEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
GL + +S+ +LI G++ A ++ + M+ DG +V Y +
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMAS 326
CG ++ + + + I F +LM++ + T LE+ M G+ D+ S
Sbjct: 942 CGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVS 1001
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMALKV 385
YN+L+ C G+ +A E++ E+K G L +V TY +V + + + +
Sbjct: 1002 YNVLITGLCAKGDMAIAFELFEEMKR---DGFLA-NVTTYKALVGGILSQGTEFSGTDII 1057
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+D+L+ G ++++ +IN + HLF
Sbjct: 1058 LKDLLARGFI-TAMSFNHMINFPQQISVNAYLKHLFH 1093
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKN 314
C ++ VC GD ++R +++ + V N + +L+N V H ++ F L +
Sbjct: 41 CTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFAL--FAE 98
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ GV ++ +YN L+ C G A+ ++ E + KGV+ +V +Y+ ++
Sbjct: 99 MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDE---MPVKGVVH-NVVSYNILIAGLC 154
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A+++ E M G+ P+ +T++ LI+ AG + A+H F +M AG P+
Sbjct: 155 RHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVV 214
Query: 435 CCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ RA R F + L+ T+V Y + D+ +
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVT----YTILIAAFAKENEMDRAFMM 270
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
S +K + +Y +L+ A C + + L M G+ PN +
Sbjct: 271 ----------LSEMEKA-GLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSV 319
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ++I G G+ AL+++ MR++G+ P+V +Y I++ + ++A +L ++M
Sbjct: 320 LYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDM 379
Query: 610 KHYQIQPNLVTYITLLRARSR-YGS 633
+H +Q + LL A++R +GS
Sbjct: 380 EHAGLQTSETICRILLDAKARLHGS 404
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 32/362 (8%)
Query: 302 AHDLKFTLEVYKNMQKLGVMA-DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A +++ L V K G A D+A+ L+ CC +G+ A+ ++ + L GV
Sbjct: 15 AAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRL---GVAP 71
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ + +M + +M GV PN T++ LI G + A L
Sbjct: 72 NEV-TYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLL 130
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGN 475
F+EM G N NIL+ + A +LF + + ++ D G
Sbjct: 131 FDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGK 190
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVK 533
+++N H Q K P+ TYN L+ C D R
Sbjct: 191 AGKMANALHFFNQM-----------------KAAGLPPSVVTYNELICGFCRVRDIARAV 233
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+M+ GL+P +++TILI A ++ A +L M + G+ DV +Y +
Sbjct: 234 RAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHAL 293
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
++ A LF+ M ++PN V Y ++ R GS + + L + +M K G
Sbjct: 294 CMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSY---KALRLIMEMRKNGLI 350
Query: 654 AN 655
N
Sbjct: 351 PN 352
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 123/314 (39%), Gaps = 54/314 (17%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LDV + +V V + A +V + M GV PN +T+++LIN G E
Sbjct: 32 GDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREM 91
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
LF EM + G EPN N L+ +F A LF
Sbjct: 92 GFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLF-------------------- 131
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--- 533
D+ + + V +YNIL+ C + ++K
Sbjct: 132 ---------DEMPVKGVVHNV------------------VSYNILIAGLCR-HSKLKDAV 163
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L MR G+ P+ +++ +LID G +G + AL M+ G+ P VV Y I
Sbjct: 164 QLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGF 223
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
R + + +A F +MK + P VTY L+ A + +E+ + + +M KAG +
Sbjct: 224 CRVRDIARAVRAFLDMKERGLAPTKVTYTILIAA---FAKENEMDRAFMMLSEMEKAGLE 280
Query: 654 ANDTYLKELIEEWC 667
+ L+ C
Sbjct: 281 VDVQSYGVLLHALC 294
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 23/282 (8%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADI----------LFCNFVREFGKKRDLVSALRAYDA 246
+V +C DV A R ++PR + + FVR R++ AL +
Sbjct: 44 LVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVR---GHREMGFAL--FAE 98
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHD- 304
++ PN+Y +I G++ +R +++++ + V N+ +N L+ + H
Sbjct: 99 MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK +++++ M++ G+ + ++N+L+ AG A + ++K A G L V
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMK---AAG-LPPSVV 214
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F + A++ DM G+ P +T++ LI A A +++A + EM
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEM 274
Query: 425 LQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQ 465
+AG E + Q +LL A C+E + A +LF+S L +
Sbjct: 275 EKAGLEVDVQSYGVLLHALCMEG-KMMHARKLFQSMDLKGVK 315
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
A+R I P + + F + +GK + +AL ++ K P++ +I CG C
Sbjct: 168 AMRREGIRP-SIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELI--CGFC 224
Query: 270 GDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMA 325
+RA+ + D++ + + + L+ A +++ + M+K G+ D+
Sbjct: 225 RVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQ 284
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SY +LL A C+ G + A++++ + ++ KGV K + Y ++ + AL++
Sbjct: 285 SYGVLLHALCMEGKMMHARKLF---QSMDLKGV-KPNSVLYDMMIYGYGREGSSYKALRL 340
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+M G+ PN ++ I N G ++A L ++M AG + + C ILL A
Sbjct: 341 IMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 561 SGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ V AL +L + G + DV A T + VC +S + +A +F+ M + PN V
Sbjct: 15 AAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEV 74
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TY L+ Y + A++ +M + G + N LI EWC
Sbjct: 75 TYTALING---YFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWC 119
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 176/399 (44%), Gaps = 31/399 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + L+S N F +L+ N H+++ L++ +N +LG D YNI L A
Sbjct: 76 TLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNAL 133
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L + ++ ++ + +G++ LDV T++ ++K A + A+ + E+M + G+
Sbjct: 134 VEDNKLKLVEMLHSKMVN---EGIV-LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ IT+++L+ G + A+ + ++ML GC + +L+ + + + A R
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249
Query: 455 LFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ S QV +G RI N+ D I + F F
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFC-RIGNV--NDALDIVD------------FMIEKGF 294
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C ++ + ++ +M SPN +++ LI A +E A
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ +I+ G+ PDV + T I+ SK A +FEEMK+ +P+ TY L+ +
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L E L + ++M +G N LI+ C+
Sbjct: 415 YERRLKEA---LMLLKEMESSGCARNAVVYNTLIDGLCK 450
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 208/495 (42%), Gaps = 45/495 (9%)
Query: 197 IVQLCVNKPDVNLAIR-------YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
++Q + + D+N A++ Y C++ + V F K+ + ALR +
Sbjct: 199 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV--LVNGFCKEGRVEEALRFVLEVSE 256
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
SP+ ++++ G C G+ + I + + + ++Y +NSL++ +
Sbjct: 257 EGFSPDQVTFNSLVN--GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ +E+ + M + +YN L+ A C A ++ + L +KG+L DV T
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL---ARILVSKGLLP-DVCT 370
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++T+++ +K +A+++ E+M + G P+ T+S LI++ +++A+ L +EM
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRIS 480
+GC N+ N L+ ++ + + A +F L S++ V DG R+
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 490
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNE 538
Q I KP TYN L+ C D + ++
Sbjct: 491 EASQLMDQMIME-----------------GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + G P+ ++ LI +G V+ A ++L+ ++ G+ AY I+ KR
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
K+ LF EM P+ +T+ + R G +Q+ + +M + G
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG--PIQEAIDFTVEMLEKGILPEFPS 651
Query: 659 LKELIEEWCEGVIQD 673
L E C ++D
Sbjct: 652 FGFLAEGLCSLSMED 666
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/490 (20%), Positives = 205/490 (41%), Gaps = 49/490 (10%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P + F + ++ ++ AL D + P+ TI++ G+C GD + +
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVN--GMCKLGDTVSA 64
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
+ + + N+ +++++++ D ++ M + G+ ++ +YN ++
Sbjct: 65 LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A+++ ++ + DV T+S ++ F A ++ +ML
Sbjct: 125 YCSYGKWSDAEQLLRDMIERN----IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA------- 446
+ P TIT+SS+I+ +E A H+F+ M+ GC P+ N L+ C A
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 447 -CQFDR---AFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM---EHKDKQSI- 490
CQ A LF+ ++ + G +G ++ M K K +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300
Query: 491 TNTPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKACCTD--YYRVKALMN 537
T T N + N + D+ + + TYNIL+ + + R + +
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+ +++ ++D +E A Q++ M +G SPDVV ++T IK ++
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R+ LF EM + + +TY L+ + G L+ Q ++++M +G +
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQD---IFEEMVSSGVCPDTI 477
Query: 658 YLKELIEEWC 667
+ ++ C
Sbjct: 478 TFRSMLAGLC 487
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 198/480 (41%), Gaps = 80/480 (16%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A + + V K D VSAL + N+ I I+D G+++K++
Sbjct: 43 PDA-VTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN 101
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ ++ + + N+ +N +++ K++ ++ ++M + + D+ +++ L+ A
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYSTIVKVFADAKWWQMALKVKEDMLS 391
G A+E+Y E+ L+ ++F TYS+++ F + A + + M+S
Sbjct: 162 KEGKVSGAEELYREM--------LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVS 213
Query: 392 AGVTPNTITWSSLINACANA-----------GLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G +P+ IT ++LI+ C A G V A LF+EM+ G P+ CN LL
Sbjct: 214 KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLL 273
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
E + ++A +F+ + SK D D
Sbjct: 274 AGLCENGKLEKALEMFKVFQKSKM------DLD--------------------------- 300
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
T T NI++ C +A L N + G+ + +++ ILI
Sbjct: 301 --------------TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVF 346
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
GN A I M G+ P V Y + + + RL++A + + M P++
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
VT+ TL++ + G V L ++ +M + G A+ LI +C+ + D N Q
Sbjct: 407 VTFSTLIKGYCKAG---RVDDGLELFSEMCQRGLVADTITYNALIHGFCK--VGDLNGAQ 461
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 52/281 (18%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ G N +T+++L+N G V QA+ L + M++ G +P++ ++ C+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNG---MCK 57
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
G+T NM K +S
Sbjct: 58 L------------------------GDTVSALNMLRKMDES------------------- 74
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K Y+ ++ C D +KA + EM G+ PN +++ +ID G
Sbjct: 75 -QIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSD 133
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q+L+ M E + PDVV ++ I V+ ++ A L+ EM I P +TY +++
Sbjct: 134 AEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMID 193
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ L + + ++ M G + L LI+ C
Sbjct: 194 GFCKHSRLEDAKH---MFDLMVSKGCSPDIITLNTLIDGCC 231
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+++++ IY ++ + + + +NS+++ + L+ ++ +M G D+ ++
Sbjct: 350 GNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTF 409
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ L+K C AG E++ E+ +G++ D TY+ ++ F A + E
Sbjct: 410 STLIKGYCKAGRVDDGLELFSEMCQ---RGLVA-DTITYNALIHGFCKVGDLNGAQDIFE 465
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+M+S+GV P+TIT+ S++ +++ + + E++
Sbjct: 466 EMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 190/454 (41%), Gaps = 35/454 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRAIYE 280
F + + GK D+V R D K L+S P++ T+I++ G +++ I
Sbjct: 170 FTTLLIQLGK-FDMVDLAR--DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 281 DLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + N + + SL+ + H+L ++ M K G + +Y+ L+ C G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ E+ KG+ + V+TY+ + DA A+++ M G PN
Sbjct: 287 RLEEAMDMLEEMVQ---KGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFR 457
T+++LI+ + G E A+ L+ +ML G P + N L+ Q CVE +F+ AF +F+
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG-RFETAFTIFK 401
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTT 515
W LS + + Y+ M K + FDK + P
Sbjct: 402 -WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI-------------FDKMLKAGSSPNV 447
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C + L+ M+ GL P+ ++T LI G +E A +
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E G+SP+ V YT I ++ A +LF +M P+ TY ++ S+ S
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ E + M K G N I+ C
Sbjct: 568 ISEAENFCG---KMVKQGLLPNVITYTSFIDGLC 598
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 187/475 (39%), Gaps = 59/475 (12%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK PN+ +I G + + +Y + + + +N+L+N + +F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++K M G + +YN ++K CL G+ A I+ ++ K +V T
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM----LKAGSSPNVIT 449
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + A+++ E M G+ P+ T++ LI+ + G +E A LF M+
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN ++ + D A LF W + V G T +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALF--WKM----VESGNLPSSQTYNVMISGFS 563
Query: 486 DKQSITNTPNF---------VPNS-HYSSF--------------------DKRFSFKPTT 515
SI+ NF +PN Y+SF +KR F P
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF-PNL 622
Query: 516 TTYNILMKACCTDYYRVKA----LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ C + A L+ + G PN ++T L+ G G A Q++
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M++ G+ P Y + ++ +++ A ++F M Q +L Y L+ A +
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR 686
+ E Q ++Q M + + +++ W V+ D +GE LC +
Sbjct: 743 NFIEEAQ---CIFQTMLEKHWNSDEVV-------WT--VLLDGLLKEGETDLCLK 785
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 186/478 (38%), Gaps = 66/478 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + + P++ I ++D + IY +++ + LN+Y +N L+
Sbjct: 127 ALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLK 186
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE------------ 345
+ + ++ M G + D SY ++ + C G A+E
Sbjct: 187 ALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVY 246
Query: 346 ---IYGEVKHLEAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
I G + + + V +L DV TYST++ ++ +MAL V M
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC------VE 445
G +PN T++SL+ G + +A+ L+ M+Q G EPN+ N L+ VE
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + + T L + + D + E +K ITN
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM-ITN------------- 412
Query: 506 DKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P Y ++ C + + L+ M PN I++ I SG
Sbjct: 413 ----GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGK 468
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E A+++L MR+ G +P+V Y + +KR ++A + E++ +I+ NLVTY T
Sbjct: 469 TEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNT 528
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
+L G + L + + G K + +I +C+ QGEV
Sbjct: 529 ILSGFCHAGMF---KGALQIAGKLLVGGTKPDSITYNTVIYAYCK---------QGEV 574
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
+ + F K DLV A ++ + PN+ + ++DV +C + M + A++ E+
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV--LCRNSMFNHALHLIEN 443
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N N FN+ + + ++ ++V M++ G ++ +YN +L A
Sbjct: 444 MANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKR 503
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A +I GE++ +E +K ++ TY+TI+ F A ++ AL++ +L G P++I
Sbjct: 504 TREALQIVGEIEEME----IKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSI 559
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T++++I A G V+ A+ L + + + G
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK +V A+ +++ PN T+ID GD + + I+ + + N
Sbjct: 361 YGK---MVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ V+ +++V + F L + +NM + ++N +K C +G T A ++
Sbjct: 418 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+++ +V TY+ ++ +AK + AL++ ++ + N +T++++++
Sbjct: 478 QMRQYGCAP----NVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGF 533
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+AG+ + A+ + ++L G +P+S N ++ A + + A +L T
Sbjct: 534 CHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLT 585
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 490 ITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ N PN + H+ S SFK T TY ++K D ++ L+ M+ G+S
Sbjct: 47 LKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISC 106
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + I+I+A +G E AL+ + E G P V Y + + + + ++
Sbjct: 107 NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIY 166
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
MK I+ N+ TY LL+A + + ++ LA
Sbjct: 167 NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLA 202
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P I F F++ A++ + +++ +PN+ ++D ++
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I ++ + N+ +N++++ H K L++ + G D +YN ++ A C
Sbjct: 510 IVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYC 569
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ V L KG DVFTY++++ + A+ + M++ G+
Sbjct: 570 KQGEVKTAIQL---VDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGIC 626
Query: 396 PNTITWSSLINACANAGLVEQAMHL 420
PN TW++L+ GL + HL
Sbjct: 627 PNRATWNALVR-----GLFSKLGHL 646
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 63/382 (16%)
Query: 292 YVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
Y+ +M +N H +F LEV G ++ +NIL+ C G+ + A+ ++
Sbjct: 195 YLLRRVMKLNQQPGHCWEFYLEVLD----YGYPPNVYLFNILMHGFCKIGDVMNARMVFD 250
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ ++ L+ V +++T++ + +K + +K M S ++P+ T+S+LIN
Sbjct: 251 EI----SRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGL 306
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
VE+A LF+EM + G PN L+ + + D A R F
Sbjct: 307 CKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIM--------- 357
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-- 526
KD+ +P TYN L+ C
Sbjct: 358 ----------------KDR----------------------GIRPDLITYNALINGLCRD 379
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + L+NEM G P+ I++T L+D C G+++ AL+I M E+G+ D VA+
Sbjct: 380 GDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I R R++ A + ++M +P+ TY ++ + G +V+ + ++
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG---DVKMGAKLLKE 496
Query: 647 MWKAGYKANDTYLKELIEEWCE 668
M + G L+ +C+
Sbjct: 497 MQRDGRVPGVVTYNALMNGFCK 518
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 168/387 (43%), Gaps = 61/387 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+Y+ ++ G C GD M +R +++++ + + ++ FN+L++ + +++
Sbjct: 224 PNVYLFNILMH--GFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGF 281
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ + D+ +Y+ L+ C A ++ E+ + G++ V T++T+
Sbjct: 282 VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEM---GLVPNGV-TFTTL 337
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +AL+ E M G+ P+ IT+++LIN G +++A L EM+ G
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ C + DG+ D S +E KD+
Sbjct: 398 KPDKITFTTLMDGCCK---------------------------DGDMD--SALEIKDRMV 428
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSP 546
+ + L+ C D RV+ ++ +M + G P
Sbjct: 429 ------------------EEGIELDDVAFTALISGLCRD-GRVRDAERMLKDMLSAGHKP 469
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++T++ID G+V+ ++LK M+ DG P VV Y + + ++K A L
Sbjct: 470 DDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLL 529
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGS 633
M + ++ PN +T+ LL ++GS
Sbjct: 530 HAMLNMEVVPNDITFNILLDGHCKHGS 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ L+V L G PN ++ L++ G V A +F+E+ + G P+ N
Sbjct: 211 WEFYLEV----LDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNT 266
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ + + F L K+ + ++RIS
Sbjct: 267 LISGYCRSKNVEEGFVL-------KSVME--------SERIS------------------ 293
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILI 555
P TY+ L+ C + RV+ L +EM +GL PN +++T LI
Sbjct: 294 --------------PDVFTYSALINGLCKES-RVEEANGLFDEMCEMGLVPNGVTFTTLI 338
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G ++ AL+ +IM++ G+ PD++ Y I R LK+A L EM +
Sbjct: 339 DGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFK 398
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
P+ +T+ TL+ + G ++ L + M + G + +D LI C +G ++D
Sbjct: 399 PDKITFTTLMDGCCKDG---DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 186/404 (46%), Gaps = 47/404 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ I+D G+C G +++ ++E++++Q + +I +NSL++ A + +
Sbjct: 213 PNVITYNIIVD--GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ DM ++N+L+ C G + A+++ G + +E+ G++ D+ TY+++
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM--IES-GIVP-DLVTYNSL 326
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ F A ++ M S G P+ I+++ LIN + VE+AM L+ EML G
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
PN + LL+ A + D A +LF ++ +++ G DG
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG------------ 434
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC------TDYYRVKALMNEMR 540
N F ++ K +FK N L+ C T + + L NE
Sbjct: 435 --LCKNDCLFEAMKLFTEL-KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE-- 489
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN +++TI+I G V+ A +++ M +G +PD++ Y T ++ S +L+
Sbjct: 490 --GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLE 547
Query: 601 QAFSLFEEMKHYQIQPNLVT---YITLLRARSRYGSLHEVQQCL 641
+ L M + P+ +T + +L +Y Q+CL
Sbjct: 548 EVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKY------QECL 585
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 166/401 (41%), Gaps = 60/401 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A + + + + NI +N+L+ H + ++ MQKLG D+ +Y L+K
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGL 184
Query: 335 CLAGNTVLA----QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C GN +A QE+ ++ E K +V TY+ IV A ++ E+M
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEIN--CKPNVITYNIIVDGLCKVGREDEAKQLFEEMK 242
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G+ P+ I+++SLI+ AG E++ L +EML G +P+ N+L+
Sbjct: 243 TQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLID--------- 293
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
TL K +G +E K + VP+
Sbjct: 294 ---------TLCK---------EGKV-----IEAKKLLGVMIESGIVPD----------- 319
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L++ C D + L M + G P+ IS+ +LI+ + VE A+
Sbjct: 320 ----LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M G P+V+ Y + +K + ++ A LF MK + I N TY L
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ L E + ++ ++ + +K L LI+ C+
Sbjct: 436 CKNDCLFEA---MKLFTELKSSNFKLEIENLNCLIDGLCKA 473
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 155/372 (41%), Gaps = 62/372 (16%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L S TLNI + N L NVN L+ + + + G ++ +YN L+K C+
Sbjct: 100 LSSDRCTLNI-LLNCLCNVNR--LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS------AGVT 395
A ++ ++ L DV TY T++K +ALK+ ++ML+
Sbjct: 157 EATRLFLRMQKLGCTP----DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN IT++ +++ G ++A LFEEM G P+ N L+ A +++ + RL
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
D D+ +P
Sbjct: 273 L----------------DEMLDQ-------------------------------GLQPDM 285
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N+L+ C + K L+ M G+ P+ +++ LI+ G++ A ++
Sbjct: 286 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G PDV++Y I ++ ++++A L+ EM +PN++TY +LL+ G
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405
Query: 634 LHEVQQCLAVYQ 645
+ + ++ +V +
Sbjct: 406 VDDAKKLFSVMK 417
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN ++ HL + + +++ ++ A K + + M +G+
Sbjct: 43 CKTGNVTATHALH--FFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T + L+N N + + F +L+ G PN N L++ + A R
Sbjct: 101 SSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160
Query: 455 LF-RSWTLSKTQ--VALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
LF R L T V G G T I N+ K Q + N S Y
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNI-NIALKLHQEMLNDI-----SRY-----EI 209
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ KP TYNI++ C K L EM+T G+ P+ IS+ LI +G E +
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L M + G+ PD+V + I + ++ +A L M I P+LVTY +L+
Sbjct: 270 KRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Query: 628 RSRYGSLHEVQQ 639
G L+ ++
Sbjct: 330 FCMVGDLNSARE 341
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/239 (16%), Positives = 105/239 (43%), Gaps = 6/239 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ + K + A++ Y+ PN+ +++ + G ++ ++ +++
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420
Query: 287 VTLNIYVFNSLMN-VNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N Y + ++ + +D F ++++ ++ ++ + N L+ C AG A
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 480
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ + L +G + +V TY+ ++ F A + + M + G TP+ IT+++L
Sbjct: 481 ELF---EKLSNEG-HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ + +E+ + L M Q P++ C+I++ + ++ L + + K
Sbjct: 537 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 61/396 (15%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ +Y+ S+ + + + +L+N + +E+ + M+K GV
Sbjct: 135 GLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRP 194
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ YN+++ C G L E G + KG+ +DVFTY++++ F A +Q A
Sbjct: 195 NLIMYNMVVDGLCKEG---LVTEACGLCSEMVGKGIC-IDVFTYNSLIHGFCGAGQFQGA 250
Query: 383 LKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+++ +M + V P+ T++ L++A G+V +A ++F M++ G EP+ CN L+
Sbjct: 251 VRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMN 310
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
W L E +D +R PN +
Sbjct: 311 G----------------WCLRGCMSEAKEVFDRMVER------------GKLPNVI---- 338
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+Y+ L+ C +AL + EM L P+ +++ L+D
Sbjct: 339 ---------------SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLS 383
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG V +++ MR G +PD++ Y + ++ + L +A +LF+ + I PN+
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY L+ + G + ++ ++Q + G + N
Sbjct: 444 TYNILIDGLCKGGRMKAAKE---IFQLLSVKGCRPN 476
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 67/411 (16%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N + + GK RD + LR + K PN+ + ++D G+C + + + A + ++
Sbjct: 169 NGLCKMGKTRDAIELLRKME---KGGVRPNLIMYNMVVD--GLCKEGLVTEACGLCSEMV 223
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+ + ++++ +NSL++ A + + + M K V D+ ++NIL+ A C G
Sbjct: 224 GKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMV 283
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ ++G L K L+ DV + + ++ + A +V + M+ G PN I+
Sbjct: 284 AEARNVFG----LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S+LIN +V++A+ L EM Q P++ N LL ++ R+ W
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDG------LSKSGRVLYEWD 393
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
L + A G+ P TYN+
Sbjct: 394 LVEAMRASGQ-----------------------------------------APDLITYNV 412
Query: 521 L----MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L +K C D + AL + G+SPN ++ ILID G ++ A +I +++
Sbjct: 413 LLDDYLKRECLD--KALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G P++ Y I R L +A +L EM PN VT+ L+RA
Sbjct: 471 KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 158/385 (41%), Gaps = 23/385 (5%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
VTL+I++ NSL ++ L F+ V + K G D + L+K CL G T A +
Sbjct: 92 VTLSIFI-NSLTHLGQMGLAFS--VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y H +KG D Y T++ + A+++ M GV PN I ++ +++
Sbjct: 149 Y---DHAVSKG-FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVD 204
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
GLV +A L EM+ G + N L+ A QF A RL + +
Sbjct: 205 GLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR 264
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
++ D + + + N + KR +P + N LM C
Sbjct: 265 PDVYTFNILVDALCKL-----GMVAEARNV-----FGLMIKR-GLEPDVVSCNALMNGWC 313
Query: 527 TD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
K + + M G PN IS++ LI+ V+ AL++L M + + PD V
Sbjct: 314 LRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTV 373
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + +S R+ + L E M+ P+L+TY LL Y + + LA++
Sbjct: 374 TYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLL---DDYLKRECLDKALALF 430
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
Q + G N LI+ C+G
Sbjct: 431 QHIVDTGISPNIRTYNILIDGLCKG 455
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/321 (18%), Positives = 120/321 (37%), Gaps = 55/321 (17%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
HL++KG K + T S + +A V ++ G + T ++L+
Sbjct: 80 HLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLK 139
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +A++L++ + G + C L+ + + A L R
Sbjct: 140 GRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM------------ 187
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
++ +P YN+++ C +
Sbjct: 188 -----------------------------------EKGGVRPNLIMYNMVVDGLCKEGLV 212
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK--IMREDGMSPDVVAYT 587
+A L +EM G+ + ++ LI G+G +GA+++L +M+ED + PDV +
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKED-VRPDVYTFN 271
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + + +A ++F M ++P++V+ L+ G + E ++ V+ M
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKE---VFDRM 328
Query: 648 WKAGYKANDTYLKELIEEWCE 668
+ G N LI +C+
Sbjct: 329 VERGKLPNVISYSTLINGYCK 349
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 57/357 (15%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +++ G+ DV+T + ++ F V + G P+T T+++LI
Sbjct: 98 KQMDSLGIPS-DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCV 156
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A+HLF++M+ G +PN L+ + A RL RS + +
Sbjct: 157 EGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI- 215
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC-- 526
+ I + KD+Q N + F + + P +TYN ++ C
Sbjct: 216 ----TYNTIIDCLFKDRQV---------NEALNIFSEMIAKGISPNVSTYNSIIHGLCKF 262
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ V LMNEM + PN + +T L+DA G V A ++ +M + G+ PDVV Y
Sbjct: 263 SEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322
Query: 587 TTAIKV-CVRS----------------------------------KRLKQAFSLFEEMKH 611
T + C+RS +R+ +A LFEEM
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ PN+VTY TL+ G L + +A++ +M +G + + L++ C+
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDA---IALFHEMVASGQIPDLVTYRILLDYLCK 436
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 171/430 (39%), Gaps = 58/430 (13%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+A+R + + PN+ TIID ++ I+ ++ ++ ++ N+ +NS++
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + K + M +M ++ + L+ A C G +A ++ V + +
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV---VDVMIQR 313
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV + DV TY+ ++ A KV + M+ G PN I++S+LIN +++
Sbjct: 314 GV-EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDK 372
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
AM+LFEEM Q PN N L+ + A LF VA G+
Sbjct: 373 AMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE------MVASGQ------ 420
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
P TY IL+ C + + A
Sbjct: 421 -----------------------------------IPDLVTYRILLDYLCKTRHLDQAMA 445
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ + L+P+ S+ I+ID G +E A + + G+ PDV YT I
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
L +A LF EM P+ TY + R R +E + + Q+M G+ A
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN---NETLSAIQLLQEMLGRGFSA 562
Query: 655 NDTYLKELIE 664
+ + + ++E
Sbjct: 563 DASTITLIVE 572
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 163/415 (39%), Gaps = 59/415 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K R + AL + SPN+ +II G+C ++ + ++ + N
Sbjct: 226 KDRQVNEALNIFSEMIAKGISPNVSTYNSIIH--GLCKFSEWKHVATLMNEMVDSKIMPN 283
Query: 291 IYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +F +L++ + T+ +V M + GV D+ +Y L+ CL A +++
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KG +V +YST++ + + A+ + E+M + PN +T+++LI+
Sbjct: 344 TMVR---KGCAP-NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ G + A+ LF EM+ +G P+ ILL + D+A + ++ S
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGS------ 453
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-- 526
+ P +YNI++ C
Sbjct: 454 -----------------------------------------NLAPDIQSYNIVIDGMCRV 472
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L + + + GL P+ ++TI+I+ G + A ++ + M DG SPD Y
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +R+ A L +EM + T ++ S G V+Q L
Sbjct: 533 NLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 503 SSFDKRFSFKPTTTTYN---ILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDAC 558
SSF++ +P + + IL +Y V +L +M ++G+ + + I+I++
Sbjct: 60 SSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSF 119
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
V+ +L + + G PD +TT I+ +CV K + +A LF++M QPN
Sbjct: 120 CHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK-IGEALHLFDKMVGEGFQPN 178
Query: 618 LVTYITLLRARSRYGS 633
VTY TL+ + G+
Sbjct: 179 GVTYGTLIHGLCKVGN 194
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ RD ++ AS + P++ R ++D ++ A+ + + N+ +I
Sbjct: 403 GRLRDAIALFHEMVASGQ---IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N +++ +L+ +++ ++ G+ D+ +Y I++ CL G A +++ E
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ G D TY+ I + F A+++ ++ML G + + T + ++ +
Sbjct: 520 ---MNTDGCSPDDC-TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLS 575
Query: 410 NAGLVEQAMHLFEEMLQ 426
+ GL + + E +Q
Sbjct: 576 DDGLDQSVKQILHEFVQ 592
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 198/453 (43%), Gaps = 67/453 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ L A+ + P++ I T+I++ G DY K+ +++ L+
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + ++NS++N+ KF E + M++ G+M D SY IL+ A +
Sbjct: 123 ASGIAPDKVIYNSMINLYGK-AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKY 181
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--------ADAKWWQMALKVKEDMLSA 392
+ A++++ E+K KG+ +LDV T + ++ V+ A+ +W M+ +
Sbjct: 182 LEAKQVFLEMK---TKGI-QLDVTTCNMMIDVYGKLEMVRDAEELFWSMS-------KTL 230
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDR 451
G+ N +T++++I A L+ +A ++F M + G EPN N +L Q ++
Sbjct: 231 GIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEK 290
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDK-R 508
A RL R M+ + + ++T + +D+
Sbjct: 291 AMRLVR-----------------------KMQQRGIEPNAVTYSTLISIYGKTGKYDRAA 327
Query: 509 FSFKPTTTTY----NILMKACCTDYYR------VKALMNEMRTVGLSPNHISWTILIDAC 558
F FK IL ++ Y R K L+ E++ + P + +IL A
Sbjct: 328 FLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAE 387
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+E A ++ E G + V Y + I++ VR+KR K A +FE M+ P+
Sbjct: 388 ----KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDS 443
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T + LL A YG L +++ +Y DM + G
Sbjct: 444 ETTVVLLAA---YGQLRQLEDAEKLYLDMRERG 473
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 198/434 (45%), Gaps = 32/434 (7%)
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ F++L++ A+ L+ + + M+ G+ D+ ++ L++ + A ++ +
Sbjct: 61 FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSK 120
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K A G+ D Y++++ ++ AK+++ A + +M AG+ P+T++++ LINA A
Sbjct: 121 LK---ASGIAP-DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYA 176
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+ +A +F EM G + + CN+++ + A LF W++SKT LG
Sbjct: 177 ESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF--WSMSKT---LG 231
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCT 527
+ T +K+ + ++ N + + +P TYN + +
Sbjct: 232 IQQNVVTYNTMIKVYKEAELLSEAFNV-----FYYMQNKGGVEPNVITYNTILFLHGLTL 286
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + L+ +M+ G+ PN ++++ LI G +G + A + K +RE G D + Y
Sbjct: 287 QHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQ 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V R+ + A L EE+K QP++V T + ++ L E + +Y
Sbjct: 347 SMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAK---LYWRS 399
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQS----LLLEKVAVH 703
+AG K +I+ + V +++N +V R + P S +LL
Sbjct: 400 HEAGEIKESVTYKSMIQLF---VRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQL 456
Query: 704 LQKSAAENLAIDLR 717
Q AE L +D+R
Sbjct: 457 RQLEDAEKLYLDMR 470
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P+ YN+++K + + L+ EM L P+ +++ LI G + +E A
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ L+ M G+ PD+V ++T I++ + K +A SLF ++K I P+ V Y +++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ E Q LA +M +AG + LI + E
Sbjct: 140 YGKAKFYKEAQGLLA---EMKEAGLMPDTVSYTILINAYAE 177
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I + G G Y ++ +++ LR + ++ ++ S++ V A + +
Sbjct: 305 PNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL 364
Query: 312 YKNMQKLGVMADMASYNILLKACCL--AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +++ ++ + +IL KA L A GE+K + TY ++
Sbjct: 365 LEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIK----------ESVTYKSM 414
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+++F K + A+ V E+M +G P++ T L+ A +E A L+ +M + GC
Sbjct: 415 IQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGC 474
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +L+ +A + A +F + L
Sbjct: 475 TLEKEVHFQMLKLYGDARKIREAEDMFAALKL 506
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 175/399 (43%), Gaps = 27/399 (6%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++++ L+ YV+ + + +L + M+ GV YN+L+
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C + A E+ + +G++ D TY T+V F + +MAL++ +DMLS
Sbjct: 239 GLCRNNRVLEAVEVKNS---MVERGIVA-DEVTYRTLVYGFCRTEELEMALEMTDDMLSL 294
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ + S +++ G +++A L + + G PN CN L+ + +F A
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFS 510
RLFR + N + + H + + + FD+
Sbjct: 355 ERLFRGMA--------NRGLEPNEVTYAILIH------SLCKRGMMDDALCMFDRMREKG 400
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ T YN L+ C ++++ + L+NEM GL+P+ S++ LI G++ A+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + M +G+S +V +TT I + + +A LF++M + PN VT+ ++
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
R G+ V++ +Y M G ++ + LI C
Sbjct: 521 CRVGN---VRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 189/448 (42%), Gaps = 74/448 (16%)
Query: 207 VNLAIRYAC------IVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
++ A R AC +VP ++ CN + + K R A R + PN
Sbjct: 316 IDKAFRLACHLGELGMVP--NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373
Query: 260 RTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVY 312
+I +C M A+ ++ +R + + + +Y +NSL+N N H + L
Sbjct: 374 AILIH--SLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL--- 428
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G+ ASY+ L+ C G+ A E++ E+ A+ + +V+T++T++
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM----ARNGVSGNVYTFTTLISG 484
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F A ++ + M+ + V PN +T++ +I G V +A L+++M+ G P+
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ +RS +S + LG K K+ + +
Sbjct: 545 NYT--------------------YRSL-ISVLCLTLG-------------AMKAKEFVDD 570
Query: 493 TPN--FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
N V N SF TT Y + T+ Y + +EMR G+ + IS
Sbjct: 571 LENNCVVLN----------SFSLTTLMYGFCKEGRLTETYHI---WDEMRARGVKLDLIS 617
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T+++ A + E + + M+E G+ PD V +T I V + + + QA + +++M
Sbjct: 618 FTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PN+VTY L+ + G L Q
Sbjct: 678 ADGCSPNVVTYTVLINHLCKSGYLSSAQ 705
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 186/443 (41%), Gaps = 70/443 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + F K ++ A R +D PN +I+ G C G+ K+ +Y+
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIE--GYCRVGNVRKAFQLYDQ 535
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL------EVYKNMQKLGVMADMASYNILLKACC 335
+ + +T + Y + SL++V L TL E +++ V+ + S L+ C
Sbjct: 536 MVDRGLTPDNYTYRSLISV----LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFC 591
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G I+ E++ A+GV KLD+ +++ IV + + +M GV
Sbjct: 592 KEGRLTETYHIWDEMR---ARGV-KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVK 647
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + + +I+ + + QA++ +++M+ GC PN +L+ L
Sbjct: 648 PDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLIN------------HL 695
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+S LS Q+ E G F+PNS
Sbjct: 696 CKSGYLSSAQILCEEMLVG--------------------RFLPNSF-------------- 721
Query: 516 TTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN + + KA +++ G N +++ LI +G ++GA+ +++
Sbjct: 722 -TYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD ++Y+T I + + +AF L+ EM + ++P++V Y L+R + +G
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHG-- 838
Query: 635 HEVQQCLAVYQDMWKAGYKANDT 657
E + L +Y DM Y A+DT
Sbjct: 839 -EFDKGLGIYSDMVNLKY-ADDT 859
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 161/398 (40%), Gaps = 57/398 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP ++ F + + + ++ A + YD +P+ Y R++I V + MK+
Sbjct: 506 VVPN-EVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKA 564
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +DL + V LN + +LM + L T ++ M+ GV D+ S+ +++ A
Sbjct: 565 KEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYA 624
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ ++I + ++ KGV +VF ++ ++ V + + AL + M++ G
Sbjct: 625 ALKLHD---GEKISVLFREMKEKGVKPDNVF-HTCMIDVHSKEENIVQALNCWDKMIADG 680
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+PN +T++ LIN +G + A L EEML PNS N L
Sbjct: 681 CSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDF----------- 729
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L L K +V +G + NT
Sbjct: 730 -LANEGELEKAKVLHATILEG--------------CLANT-------------------- 754
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N L+K C A LM G P+ IS++ +I+ G++ A Q+
Sbjct: 755 --VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLW 812
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M G+ PD+VAY I+ C + ++ +M
Sbjct: 813 NEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 191/466 (40%), Gaps = 55/466 (11%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN++ C +ID +C D + ++ ++ + ++ + N + L++ + L
Sbjct: 333 PNLFACNALID--KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDAL 390
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G+ + YN L+ C N A+ G + + KG L +YS +
Sbjct: 391 CMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR---GLLNEMVEKG-LAPSAASYSPL 446
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+++ +M GV+ N T+++LI+ G +++A LF++M+ +
Sbjct: 447 IAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-------ISNM 482
PN N++++ +AF+L+ V G D T R ++
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLY------DQMVDRGLTPDNYTYRSLISVLCLTLG 560
Query: 483 EHKDKQSITNTPN--FVPNSH------------------YSSFD--KRFSFKPTTTTYNI 520
K K+ + + N V NS Y +D + K ++ +
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTV 620
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ A D ++ L EM+ G+ P+++ T +ID N+ AL M DG
Sbjct: 621 IVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADG 680
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
SP+VV YT I +S L A L EEM + PN TY L + G L + +
Sbjct: 681 CSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAK 740
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQ---DKNQNQGE 680
V G AN LI+ +C+ G IQ D QN E
Sbjct: 741 ----VLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 176/457 (38%), Gaps = 33/457 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ + V F + +L AL D P++ C ++D G K+ +
Sbjct: 265 EVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLAC 324
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N++ N+L++ D +F +++ M G+ + +Y IL+ + C G
Sbjct: 325 HLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRG 384
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ + + KG+ ++ V+ Y++++ + + A + +M+ G+ P+
Sbjct: 385 ---MMDDALCMFDRMREKGI-RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++S LI G + AM L EM + G N L+ + D A RLF
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDK 500
Query: 459 W---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKP 513
++ +V +G R+ N+ + +D+ P
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYC-RVGNVRKA----------------FQLYDQMVDRGLTP 543
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ C +KA ++++ + N S T L+ G + I
Sbjct: 544 DNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIW 603
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
MR G+ D++++T + ++ ++ LF EMK ++P+ V + ++ S+
Sbjct: 604 DEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKE 663
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ Q L + M G N LI C+
Sbjct: 664 ---ENIVQALNCWDKMIADGCSPNVVTYTVLINHLCK 697
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 60/386 (15%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAH 303
KK+ ++Y T+I G+CG + + +Y+++ V+ ++ V+N+++N + A
Sbjct: 282 KKNERGQDLYTYSTLIH--GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 340 RIEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADS 394
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY +V + AL + E+ + +T +SS+IN G +++ + ++
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC+PN CN ++ V A + + A R F NM
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFF-----------------------GNMV 491
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT 541
K F PT TYN L+ + AL+ EM
Sbjct: 492 SK-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLH 527
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++++L++ ++ AL + E G PDV + I S +++
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
A L+ EMK + PNLVT+ TL+
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEG 613
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 174/382 (45%), Gaps = 26/382 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+++ T+I+ G + +++++ + VT ++ +N L++ D+ E
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240
Query: 311 VYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + K V ++ SYN+++ C G + EI+ +K E D++TYST+
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ----DLYTYSTL 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A +V ++M GV+P+ + +++++N AG +E+ + L++ M + GC
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NIL++ E + D A + W L + D ++ + H +
Sbjct: 357 R-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----DCCADSMTYGVLVHGLCK- 406
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N N S ++ + + T Y+ ++ C + V ++++M G
Sbjct: 407 -----NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 461
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +I+ + +E AL+ M G P VV Y T I +++R +A++L
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
+EM H +PN++TY L+
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNG 543
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 213 RGVTPDVACYNILI---------DGFFK-------------------------------- 231
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 232 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRG 368
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 160/372 (43%), Gaps = 37/372 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 120 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 174
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 175 MWEQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLF-------RSWTL-SK 463
+ A ++E +L+ PN N+++ + +FD +F ++ R L +
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ + G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 354 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV V
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA---GV 451
Query: 644 YQDMWKAGYKAN 655
M K G K N
Sbjct: 452 LDQMTKHGCKPN 463
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
T++K +A AL + + M G P +++SL+NA + ++A F
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN Q NIL++ QFD+A L +W + D I+++
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELL-NWMWEQ---GFSPDVFSYGTLINSL---- 194
Query: 487 KQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTDYYRVKALMNE-- 538
N + S K F P YNIL+ +++ ++N
Sbjct: 195 ----------AKNGYMSDALKLFDEMPERGVTPDVACYNILIDG----FFKKGDILNASE 240
Query: 539 -----MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ + PN S+ ++I+ G + + +I M+++ D+ Y+T I
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S L A +++EM + P++V Y T+L R G +++CL +++ M K G +
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG---RIEECLELWKVMEKEGCR 357
Query: 654 ANDTY 658
+Y
Sbjct: 358 TVVSY 362
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 198/509 (38%), Gaps = 98/509 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y M + L K G+ +E I + +E + + + + G+ S G +D
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNE----RGQDLYTYSTLIHGLCGS---GNLDGAT 310
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE--------FR 185
V K++ E GV+P D + + N L +G +E + L +V+E+ +
Sbjct: 311 RVYKEMAENGVSP----DVVVYNTMLNG---YLRAGRIEECLELWKVMEKEGCRTVVSYN 363
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD-----ILFCNFVREFGKKRDLVSA 240
+ ++ L E + V+ AI ++P D + + V K L A
Sbjct: 364 ILIRGLFENAK----------VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
L + ++ + + ++I+ G+C G + + + + N +V N+++
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMIN--GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N V A L+ L + NM G + +YN L+ A E Y VK + K
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF---SEAYALVKEMLHK 528
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K ++ TYS ++ K MAL + L G P+ + +I+ ++G VE
Sbjct: 529 G-WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ EM Q C PN N L++ + F+RA +++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW-------------------- 627
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--- 533
D I ++ +P +YNI +K C+ +R+
Sbjct: 628 DHIL---------------------------QYGPQPDIISYNITLKGLCS-CHRISDAV 659
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSG 562
+N+ G+ P I+W IL+ A +G
Sbjct: 660 GFLNDAVDRGVLPTAITWNILVRAVLDNG 688
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 174/410 (42%), Gaps = 28/410 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 241 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 295
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 296 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 355
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
N L++ + + ++F+ K + L Y + +E K +
Sbjct: 356 NANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE-KGR 414
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ + + F P +Y+IL+ + + M+ G +
Sbjct: 415 MIFEDI-------------RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++D SG V A +IL+ M+E + P V Y + + RL +A+ L
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
FEE K I+ N+V Y +L+ +G + + + + ++M K G N
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDG---FGKVGRIDEAYLILEEMMKKGLTPN 568
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 182/441 (41%), Gaps = 32/441 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF VR ++ + AL D K P++ + ID G G+ + + +L
Sbjct: 82 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + + S++ V A L E++ M+ + +YN ++ AG
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ L +G + V ++++I+ + AL + E ++ PN+ T
Sbjct: 202 ---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSST 256
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ G VE+A + +EM A PN NI++ +A + + A+++F S +
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316
Query: 461 --------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF------- 505
++ + G G D + K + N V S +F
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376
Query: 506 DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
D F KP T N M + + + + ++R+ G P+ S++ILI
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+G I M++ G + D AY + +S ++ +A+ + EEMK +Q
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496
Query: 616 PNLVTYITLLRARSRYGSLHE 636
P + TY ++ ++ L E
Sbjct: 497 PTVATYGAIVDGLAKIDRLDE 517
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 148/359 (41%), Gaps = 53/359 (14%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + MQ++G + + L++A G A + EVK L+ D+ Y+
Sbjct: 64 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG----SCLEPDIVLYN 119
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ F A MA K ++ + G+ P+ ++++S+I AG + +A LF +M
Sbjct: 120 VCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P + N ++ A +F+ A++L +R+ +++
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLL--------------------ERL-----RER 214
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
I + +F NS + K+ + + ++ K PN
Sbjct: 215 GCIPSVVSF--NSILTCLGKKRKVDEALSLFEVMKKDA-------------------EPN 253
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+ID G VE A +IL M + P+++ + ++++L++A+ +FE
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
P+ VTY +L+ + G + E + +++ M AG+ AN LI +
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR---LFEKMLDAGHNANPVVYTSLIRNF 369
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 41/269 (15%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D G+ K R I
Sbjct: 360 VVYTSLIRNFFIHGRKED---GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED+RS ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 476
Query: 337 AGNTVLAQEIYGEVKH--------------------------------LEAKGVLKLDVF 364
+G A EI E+K ++KG+ +L+V
Sbjct: 477 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI-ELNVV 535
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
YS+++ F A + E+M+ G+TPN TW+SL++A A + +A+ F+ M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ C PN+ +IL+ ++++AF
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAF 624
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 171/430 (39%), Gaps = 60/430 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ +C+ + GKK + A R ++ H ++P +Y ++I I G ++
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT--SLIRNFFIHGRKEDGHKVF 382
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L + ++ + N+ M+ A +++ ++++++ G + D+ SY+IL+ A
Sbjct: 383 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 442
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I+ H + LD Y+ +V F + A ++ E+M V P
Sbjct: 443 GQARETSNIF----HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 498
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+ ++++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 499 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI-- 556
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+E K+ +T P T
Sbjct: 557 ------------------------LEEMMKKGLT---------------------PNVYT 571
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+ A +AL+ M+ + PN +++ILI+ A + M+
Sbjct: 572 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 631
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV YTT I + + A+SLFE K P+ ++ L+ S
Sbjct: 632 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 691
Query: 636 EVQQCLAVYQ 645
E Q VYQ
Sbjct: 692 EAYQT-TVYQ 700
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R F+P + Y +L+ A +AL + +M+ VG +T L+ A G V
Sbjct: 37 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 96
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL ++ ++ + PD+V Y I ++ + A F E+K ++P+ V+Y ++
Sbjct: 97 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSM 156
Query: 625 LRARSRYGSLHEVQQCLA 642
+ + G L E ++ A
Sbjct: 157 IWVLCKAGRLGEAEELFA 174
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR + P ++T+LI A + E AL++L+ M+E G V +TT ++ R +
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ A +L +E+K ++P++V Y + +G V + ++ G K +D
Sbjct: 96 VADALALVDEVKGSCLEPDIVLYNVCIDC---FGKAGNVDMACKFFHELKAQGLKPDDVS 152
Query: 659 LKELIEEWCE 668
+I C+
Sbjct: 153 YTSMIWVLCK 162
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 186/444 (41%), Gaps = 34/444 (7%)
Query: 234 KRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
K D+V R D K L+S P++ T+I++ G +++ I + + N
Sbjct: 179 KFDMVDLAR--DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236
Query: 291 IYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + SL+ + H+L ++ M K G + +Y+ L+ C G A ++
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + KG+ + V+TY+ + DA A+++ M G PN T+++LI+
Sbjct: 297 E---MVQKGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFRSWTLSKTQVA 467
+ G E A+ L+ +ML G P + N L+ Q CVE +F+ AF +F+ W LS +
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG-RFETAFTIFK-WMLSHGSLP 410
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
+ Y+ M K + FDK + P TYN L+
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVI-------------FDKMLKAGSSPNVITYNTLIYGY 457
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + L+ M+ GL P+ ++T LI G +E A + M E G+SP+
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V YT I ++ A +LF +M P+ TY ++ S+ S+ E +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG- 576
Query: 644 YQDMWKAGYKANDTYLKELIEEWC 667
M K G N I+ C
Sbjct: 577 --KMVKQGLLPNVITYTSFIDGLC 598
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 187/475 (39%), Gaps = 59/475 (12%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK PN+ +I G + + +Y + + + +N+L+N + +F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++K M G + +YN ++K CL G+ A I+ ++ K +V T
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM----LKAGSSPNVIT 449
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + A+++ E M G+ P+ T++ LI+ + G +E A LF M+
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN ++ + D A LF W + V G T +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALF--WKM----VESGNLPSSQTYNVMISGFS 563
Query: 486 DKQSITNTPNF---------VPNS-HYSSF--------------------DKRFSFKPTT 515
SI+ NF +PN Y+SF +KR F P
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF-PNL 622
Query: 516 TTYNILMKACCTDYYRVKA----LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ C + A L+ + G PN ++T L+ G G A Q++
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M++ G+ P Y + ++ +++ A ++F M Q +L Y L+ A +
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRR 686
+ E Q ++Q M + + +++ W V+ D +GE LC +
Sbjct: 743 NFIEEAQ---CIFQTMLEKHWNSDEV-------AWT--VLLDGLLKEGETDLCLK 785
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 36/379 (9%)
Query: 289 LNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
L I +N+L+N A +F L +VY M + V ++ +YN ++ C GN A
Sbjct: 181 LIIGCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ + L D FTY++++ + K A KV +M G N + ++
Sbjct: 238 NQYVSKI----VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------ 457
LI+ A +++AM LF +M C P + +L+++ + + A L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 458 ------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------- 503
++T+ + ++ + + M K T N + N +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 504 ---SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ P T TYN L+K C ++ ++ ++N+M + P+ +++ LID
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+ ++ + PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 620 TYITLLRARSRYGSLHEVQ 638
Y L+ + G + E
Sbjct: 534 MYTALIDGYCKAGKVDEAH 552
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 197/470 (41%), Gaps = 47/470 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ V E M S ++PNT T++ LI + V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E K PN V + + +K S P + T+N
Sbjct: 518 DLFDSLEQKGVN-----PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKALMNE--MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C D +A + E M +GL P + TILI G+ + A + M G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL A + +M+ + P+L TY +L++ YG L +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTN 689
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL--L 696
V + M G + + LI+ E ++ Q E LC +N ++ L
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLE--MKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 697 LEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGTDEF 746
LEK+ H A++ + G+ +V + V M+ N + E
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 188/441 (42%), Gaps = 80/441 (18%)
Query: 254 PNMYICRTIID-VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
PN++ +ID +C C + K+R + + + + N+ +N+L+N +A D
Sbjct: 356 PNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 305 LKFTLE----------------------VYKNMQKLG------VMADMASYNILLKACCL 336
+ +E V+K M L V+ D+ +YN L+ C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+GN A Y + + +G++ D +TY++++ +K + A + + + GV P
Sbjct: 475 SGNFDSA---YRLLSLMNDRGLVP-DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRL 455
N + +++LI+ AG V++A + E+ML C PNS N L+ C + +L
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG-------KL 583
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKP 513
+ L + V +G +TD I + H+ + +F + YS F + S KP
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTI--LIHR----LLKDGDF--DHAYSRFQQMLSSGTKP 635
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY ++ C + + A +M +MR G+SP+ +++ LI G G A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS------------------LFEEMKHYQ 613
K MR+ G P + + IK + K KQ S L E+M +
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 614 IQPNLVTYITLLRARSRYGSL 634
+ PN +Y L+ G+L
Sbjct: 756 VTPNAKSYEKLILGICEVGNL 776
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 165/428 (38%), Gaps = 41/428 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + K + + A +D+ ++ +PN+ + +ID G C G ++ + E
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID--GYCKAGKVDEAHLMLEK 557
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+N N FN+L++ D LK + + M K+G+ +++ IL+ G+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Y + + + G K D TY+T ++ + A + M GV+P+
Sbjct: 618 ---FDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI + G A + + M GCEP+ L++ +E +
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 460 TLSKTQVALGEDYDGNTDRISNM-EHKDKQSITNTPNF-----------------VPNSH 501
+S ++D + + M EH + TPN V
Sbjct: 734 AMSNMM-----EFDTVVELLEKMVEH------SVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 502 YSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ + P+ +N L+ CC + ++++M VG P S +LI
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G E + + + + G D +A+ I + ++ + LF M+ + +
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 620 TYITLLRA 627
TY L+
Sbjct: 903 TYSLLIEG 910
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L+ C D + NEM G N +++T LI + ++ A+ +
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M++D P V YT IK S+R +A +L +EM+ I+PN+ TY L+ +
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ ++ L M + G N LI +C+ G+I+D
Sbjct: 371 QCKFEKARELLG---QMLEKGLMPNVITYNALINGYCKRGMIED 411
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS-------PNHISWTILID 556
D+RF +K YN L+ + L++EM+ V + PN ++ +++
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLAR-----FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GNVE A Q + + E G+ PD YT+ I + K L AF +F EM +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 617 NLVTYITLLRA 627
N V Y L+
Sbjct: 287 NEVAYTHLIHG 297
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 41/441 (9%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTL 289
G RDL+ ++ S+ L + N Y I V G C ++K A +L +QN L
Sbjct: 259 LGDARDLLMDMK----SRGLLPNRNTYN----ILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 290 -NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+N N ++ ++ M+ L ++ D+ SYN L+ C L + + E
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC-LEWSKI--SEA 367
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + KGV K + T++ +VK + A M +G +P+ +T+++LIN
Sbjct: 368 FKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
AG + +A +EM + + +S N +L+ + + A++L S
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 460 -TLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNF-----------VPNSHYSSF 505
+S + +G DGN DR + E K+K+ I +T + S
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 506 DKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++ P TTYN ++ C D + N+M P+ + IL+
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E AL++ G + D V Y T I + RL AF+L EM+ ++ P+ TY
Sbjct: 607 GMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
++ A + G + E ++ ++
Sbjct: 667 NAIITALTDSGRIREAEEFMS 687
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 196/483 (40%), Gaps = 76/483 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVC---GICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + K+ PN+ C T+++ SR + D + N+ FN
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE--------- 345
++ + KF +E M K D +YN +L A C G A++
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273
Query: 346 -----------IYGEVKH---LEAKGVLKL--------DVFTYSTIVKVFADAKWWQMAL 383
+YG K EA V++L DV+TY+ ++ + + A
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K++++M + + P+ +++++LIN C + +A L EEM + G +PN+ NI+++
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-- 501
+ + D A ++ I+ ME T N + N +
Sbjct: 394 CKEGKMDDA-----------------------SNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 502 -------YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
+ + D+ R + K + T N +++ C + +A L++ R G + +S
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI GNV+ AL++ M+E + P V Y I + + +QA S E+
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EG 669
+ P+ TY T+L R G +V++ + M + +K + L+ C EG
Sbjct: 551 ESGLLPDETTYNTILHGYCREG---DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 670 VIQ 672
+++
Sbjct: 608 MLE 610
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/553 (21%), Positives = 217/553 (39%), Gaps = 116/553 (20%)
Query: 229 REFGKKRDLVSALRAYDASKKH--------LSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
R+F + L+ A D ++H L+SP+ + T I G + I++
Sbjct: 102 RKFSDAKSLLLGFIATD--RRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFK 159
Query: 281 DLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N+ N+L+N ++H + F+ E + + KLG++ ++ ++NI++ C
Sbjct: 160 KMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYC 219
Query: 336 LAG------------------------NTVL----AQEIYGEVKHL----EAKGVLKLDV 363
L NT+L + G+ + L +++G+L +
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLP-NR 278
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ +V + W + A V E M + P+ T++ LIN N G +E+A L +E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGE 470
M P+ N L+ C+E + AF+L + + K G+
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFDK--RFSFKPTTTTYN 519
D ++ I+ ME T N + N + + + D+ R + K + T N
Sbjct: 399 -MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 520 ILMKACCTD-------------------------------YY------RVKALMNEMRTV 542
+++ C + Y+ R L +EM+
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ +++ +I G E A+ L + E G+ PD Y T + R +++A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY-LKE 661
F +M +P++ T LLR G L ++ L ++ + W + KA DT
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGML---EKALKLF-NTWVSKGKAIDTVTYNT 633
Query: 662 LIEEWC-EGVIQD 673
LI C EG + D
Sbjct: 634 LITSLCKEGRLDD 646
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 156/401 (38%), Gaps = 80/401 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SP+ T+I+ G+ ++ +++ +N+ ++ N+++ + K E Y
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE-EAY 473
Query: 313 K---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K + +K G D SY L+ GN A +++ E+K E + TY+ I
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE----IIPSTVTYNCI 529
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A+ ++L +G+ P+ T++++++ G VE+A +M++
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ CNILL+ ++A +LF +W V+ G+ D
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTW------VSKGKAID---------------- 627
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
T TYN L+ + C + A L++EM L P+
Sbjct: 628 -------------------------TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSP-----------------------DVV 584
H ++ +I A SG + A + + M E G P V
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSV 722
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AY+ IK + K A +F E K I + TYI L+
Sbjct: 723 AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 183/428 (42%), Gaps = 67/428 (15%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAH 303
KK+ ++Y T+I G+CG + + +Y+++ V+ ++ V+N+++N + A
Sbjct: 282 KKNERGQDLYTYSTLIH--GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 340 RIEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADS 394
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY +V + AL + E+ + +T +SS+IN G +++ + ++
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC+PN CN ++ V A + + A R F NM
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFF-----------------------GNMV 491
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT 541
K F PT TYN L+ + AL+ EM
Sbjct: 492 SK-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLH 527
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++++L++ ++ AL + E G PDV + I S +++
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L+ EMK + PNLVT+ TL+ + + + ++ ++ + ++ +N Y+
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEG---FYKVRDFERASKIWDHILQSWSSSNCYYM-- 642
Query: 662 LIEEWCEG 669
E C+G
Sbjct: 643 --EHTCQG 648
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 173/382 (45%), Gaps = 26/382 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+++ T+I+ G + +++++ + VT ++ +N L++ D+ E
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240
Query: 311 VYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + K V ++ SYN+++ C G + EI+ +K E D++TYST+
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ----DLYTYSTL 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A +V ++M GV+P+ + +++++N AG +E+ + L++ M + GC
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NIL++ E + D A + W L + D ++ + H
Sbjct: 357 R-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----DCCADSMTYGVLVH----- 402
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N N S ++ + + T Y+ ++ C + V ++++M G
Sbjct: 403 -GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 461
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +I+ + +E AL+ M G P VV Y T I +++R +A++L
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
+EM H +PN++TY L+
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNG 543
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 213 RGVTPDVACYNILI---------DGFFK-------------------------------- 231
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 232 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRG 368
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 160/372 (43%), Gaps = 37/372 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 120 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 174
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 175 MWEQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLF-------RSWTL-SK 463
+ A ++E +L+ PN N+++ + +FD +F ++ R L +
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ + G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 354 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV V
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA---GV 451
Query: 644 YQDMWKAGYKAN 655
M K G K N
Sbjct: 452 LDQMTKHGCKPN 463
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 509 FSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F +P +YN L+ A + ++ T+GLSPN ++ ILI +
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 167
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L M E G SPDV +Y T I ++ + A LF+EM + P++ Y L+
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Query: 627 ARSRYGSL 634
+ G +
Sbjct: 228 GFFKKGDI 235
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 53/434 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK DL S R + +H PN+ ++ G+C G ++ A+ +++ S+ + +
Sbjct: 235 KKGDLESGFRLWSQMLRHGLKPNVITYNVLLS--GLCRAGRMGETAAVLDEMASRKMVPD 292
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + ++ D + L +++ K GV + +ILL C G A+E+
Sbjct: 293 GFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV-- 350
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G+L+ V Y+T++ + + A + + M S + P+ IT+++LIN
Sbjct: 351 -LQTLVNSGLLQTTVI-YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ +A L EM + G P+ + N L+ A A Q ++ F +
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII------------- 455
Query: 469 GEDYDGNTDRISNMEHKDKQ-------SITNTPNFVPNSH----YSSFDKRF--SFKPTT 515
+S+M+ K + SI N F N + D F P
Sbjct: 456 ----------LSDMQEKGLKPNVVSYGSIVNA--FCKNGKILEAVAILDDMFIKDVLPGA 503
Query: 516 TTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN ++ A C + L +M++ G+ P+ +++ +LI + A ++L
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS 563
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+R G++PDV++Y T I C +A L +EM I+P+ TY L + G
Sbjct: 564 LRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGR 623
Query: 634 LHEVQQCLAVYQDM 647
+HE++ +YQ M
Sbjct: 624 VHEMEN---LYQQM 634
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 177/427 (41%), Gaps = 62/427 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYV 293
D + L ++ S K Y C +++ G+C D S+A + + L + + +
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLN--GLCKDGKISKAEEVLQTLVNSGLLQTTVI 365
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+N DL+ +++ M+ + D +YN L+ G E + V
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL---GKVERITEAHDLVI 422
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E GV V T++T++ + A + + DM G+ PN +++ S++NA
Sbjct: 423 EMEKNGV-NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G + +A+ + ++M P +Q N ++ A +E D+AF L
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML---------------- 525
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDY 529
+K + P P+ TYN+L+K C +
Sbjct: 526 -------------AEKMKSSGVP------------------PSIVTYNLLIKGLCKQSQI 554
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L++ +R GL+P+ IS+ LI AC N + AL++ K M + G+ P Y
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ R+ + +L+++M + P Y ++ A ++ G +V+ A+ ++M
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVE---ALRKEMSD 671
Query: 650 AGYKAND 656
G D
Sbjct: 672 KGIAVGD 678
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 32/354 (9%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D ++N ++AC +AG+ E G ++ + G + F+Y+ ++ A A
Sbjct: 151 DTFTWNKAVQACVVAGDL---DEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDA 207
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K+ ++M V PN IT++++I+ G +E L+ +ML+ G +PN N+LL
Sbjct: 208 VKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDY----DGNTDRISNMEHKDKQSITNTPNFVP 498
A + + S+ V G Y DG++ D Q++
Sbjct: 268 LCRAGRMGETAAVLDEMA-SRKMVPDGFTYSILFDGHS------RTGDSQTM-------- 312
Query: 499 NSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
S F++ + K T +IL+ C D KA ++ + GL + + L
Sbjct: 313 ---LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ G++EGA I + M+ + PD + Y I + +R+ +A L EM+ +
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGV 429
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P++ T+ TL+ A R G L ++C + DM + G K N ++ +C+
Sbjct: 430 NPSVETFNTLIDAYGRAGQL---EKCFIILSDMQEKGLKPNVVSYGSIVNAFCK 480
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 168/400 (42%), Gaps = 34/400 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN + +I G + +++++ + V N +N++++ + DL+
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + G+ ++ +YN+LL C AG + E+ A + D FTYS +
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM----ASRKMVPDGFTYSILF 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q L + E+ + GV T S L+N G + +A + + ++ +G
Sbjct: 301 DGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLL 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ N L+ + + AF +F +S + + Y+ + + +E
Sbjct: 361 QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHIT----YNALINGLGKVER--- 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRT 541
IT + V ++ P+ T+N L+ A Y R L +++M+
Sbjct: 414 --ITEAHDLVIEM------EKNGVNPSVETFNTLIDA----YGRAGQLEKCFIILSDMQE 461
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL PN +S+ +++A +G + A+ IL M + P Y I + Q
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQ 521
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
AF L E+MK + P++VTY L++ + + E ++ L
Sbjct: 522 AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELL 561
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 32/334 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + + + DL A + K L P+ +I+ G ++ + +
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V ++ FN+L++ A L+ + +MQ+ G+ ++ SY ++ A C G
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A I + + K VL Y+ I+ + + A + E M S+GV P+ +
Sbjct: 484 ILEAVAI---LDDMFIKDVLP-GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIV 539
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS- 458
T++ LI + +A L + + G P+ N L+ AC DRA L +
Sbjct: 540 TYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEM 599
Query: 459 WTLS-----KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
W +T L G R+ ME N + DK P
Sbjct: 600 WKCGIKPSPRTYRMLFSSL-GGAGRVHEME---------------NLYQQMLDK--DVVP 641
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ YNI++ A C + +V+AL EM G++
Sbjct: 642 CSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +W + AC +G+++ A+ +L+ M DG +P+ +Y I ++ A
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF+EM + PN +TY T++ + G L + ++ M + G K N L+
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDL---ESGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 665 EWC 667
C
Sbjct: 267 GLC 269
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 36/336 (10%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D A YN L+ C G A+ + +K + + + DV TY++++ A
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNV---LKMMLERSCVP-DVITYTSLIVGCCQTNALDEA 181
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ E M +G+TP+T+ +++L+N +E+ L EEM++AG EP++ N ++
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTD---RISNMEHKDKQSITNTPNF 496
E+ +++ A ++ K G D Y+ D ++S M+ ++
Sbjct: 242 LCESGKYEEAGKILEKMIEKKC----GPDVVTYNSLMDGFCKVSKMDEAERL-------- 289
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISW 551
+R + PT TY L+ D YRV M +M G+SP+ +++
Sbjct: 290 ----LEDMVGRRCA--PTVITYTTLIGGFSRADRLADAYRV---MEDMFKAGISPDLVTY 340
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+D +G +E A ++L++M E +PDVV Y+ + + ++ A L E M
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
QPNLVT+ T++ + G + E + L + +++
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 164/384 (42%), Gaps = 33/384 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + ED+ + + + +L+ A L V ++M K G+ D+ +YN LL
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG A E+ + + DV TYS +V A + E ML
Sbjct: 345 DGLCKAGKLEEAHELL----EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN +T++++I+ AG V++ + E M + C P+ + L+ C+ +R
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG---YCKANR 457
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRF 509
F +S + + +G S + ++ Q + + T P
Sbjct: 458 MQDAFAILGISPDKASYSSMLEG---LCSTGKVEEAQEVMDLMTKQGCP----------- 503
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT++ Y +++ C +AL + M G PN +++ILI+ + VE A
Sbjct: 504 ---PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDA 560
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +L +M E G PDV YT+ I + ++ A+ F+ M+ +P+ + Y L+
Sbjct: 561 INVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISG 620
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V++ + V Q M + G
Sbjct: 621 FCQSGN---VEKAIEVMQLMLEKG 641
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 142/354 (40%), Gaps = 39/354 (11%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++Y L+ AGN+ + EI E+ DV T++TI+K + AL
Sbjct: 25 STYGALITGFSRAGNSKMVLEIANEMLARR----FSPDVITHNTILKAYCQIGDLDRALS 80
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ +P T+ LI+ +++A L +EM+Q C P++ N L+
Sbjct: 81 HFRGKMWC--SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 445 EACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + D A + + ++ T + +G D + K K+S
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES------- 191
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
P T YN L+ C V L+ EM G P+ S+ +
Sbjct: 192 -------------GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTV 238
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ SG E A +IL+ M E PDVV Y + + + ++ +A L E+M +
Sbjct: 239 VACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRC 298
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P ++TY TL+ SR L + + V +DM+KAG + L++ C+
Sbjct: 299 APTVITYTTLIGGFSRADRLADAYR---VMEDMFKAGISPDLVTYNCLLDGLCK 349
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 43/239 (17%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T+ID G C G + + E ++ + T ++ +++L++ A+ ++
Sbjct: 405 PNLVTFNTMID--GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-------------------IYGEV 350
+ LG+ D ASY+ +L+ C G AQE I G +
Sbjct: 463 AI------LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516
Query: 351 KHLE-AKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+E LK+ +++TYS ++ K + A+ V + ML G P+
Sbjct: 517 CDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI+ ++ A F+ M +GCEP+ NIL+ ++ ++A + +
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 180/405 (44%), Gaps = 25/405 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ +I G + ++ + ++ +I ++N L+ F+ ++
Sbjct: 57 PDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKY 116
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ G++ D +Y +L AC GN E E++ + +K D YS ++
Sbjct: 117 FSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMR----EAGIKPDQVAYSILID 172
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F A + A ++ +G P+++ +++LI+A A G+V+QA +F+E ++ C
Sbjct: 173 MFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLD 232
Query: 432 NSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ ++Q +A D+A +L + L ++ G + N + Q
Sbjct: 233 DPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGS--------VLNAFMRANQ 284
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
+ F + RF T N+ KA + + L+ +MR +G N
Sbjct: 285 PMGAIKLF---EEMQESNCRFGESTYITMLNVYSKAGF--HSAAEELLAKMRQLGFRRNV 339
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LID G G ++ A ++ M++ G +++ Y T + + ++ R+ A L E
Sbjct: 340 VAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAE 399
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+K ++ P+ VTY TL+ A +R G E C+ V++ G K
Sbjct: 400 LKDSKLVPDTVTYTTLINAYNRLGRFEE---CIRVFEQHRADGLK 441
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 135/371 (36%), Gaps = 61/371 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ +ID+ G G + + A + +L
Sbjct: 162 PDQVAYSILIDMFGKAGRHEDAAATFREL------------------------------- 190
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
Q G + D +YN L+ A G A ++ E + + D + T+++V+
Sbjct: 191 --QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQ----RSFCLDDPVIFYTMIQVY 244
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A A+ AL V + M G+ PN + + S++NA A A+ LFEEM ++ C
Sbjct: 245 AKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGE 304
Query: 434 QCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE--DYDGNTDRISNMEHKDKQ 488
+L +A A L R + VA D G ++
Sbjct: 305 STYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEA------ 358
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSP 546
+ S K+ K YN + M + LM E++ L P
Sbjct: 359 -----------TRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVP 407
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++T LI+A G E +++ + R DG+ D + I V ++++ + L
Sbjct: 408 DTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELL 467
Query: 607 EEMKHYQIQPN 617
E M IQP+
Sbjct: 468 EVMPKSGIQPD 478
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F ++ + K R AL K+ PN ++++ M + ++E+
Sbjct: 235 VIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEE 294
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ N + +++NV A E+ M++LG ++ +Y+ L+ G
Sbjct: 295 MQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGK 354
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K KG ++ Y+T++ ++ A A ++ ++ + + P+T+
Sbjct: 355 LQEATRLFSTMKQQGCKG----NLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTV 410
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LINA G E+ + +FE+ G + + I++ +A Q+ + L
Sbjct: 411 TYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVM 470
Query: 460 TLSKTQ 465
S Q
Sbjct: 471 PKSGIQ 476
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
++M+ +G P+ + + ILI G GN A++ ++++G+ PD Y + C +
Sbjct: 83 SKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKV 142
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ + +EM+ I+P+ V Y L+ +G + A ++++ +GY +
Sbjct: 143 GNIDKGNETLKEMREAGIKPDQVAYSILI---DMFGKAGRHEDAAATFRELQMSGYLPDS 199
Query: 657 TYLKELIEEWCE 668
LI + +
Sbjct: 200 VAYNTLIHAFAK 211
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 80/176 (45%), Gaps = 6/176 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+ T+ID+ G G ++ ++ ++ Q N+ V+N+++++ A + +
Sbjct: 338 NVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLM 397
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
++ ++ D +Y L+ A G +E + A G LKLD + ++ V
Sbjct: 398 AELKDSKLVPDTVTYTTLINAYNRLGRF---EECIRVFEQHRADG-LKLDRILVAIMINV 453
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ A+ + ++ E M +G+ P+T +++ + G+ E A L ++ + G
Sbjct: 454 YGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 36/406 (8%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN L++ A KF L + + MQ+LG+ ++ +YNIL+ C LA +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + + T S+++ + K A+ + + M+ G P+TIT+++LI+
Sbjct: 69 GKMMKLGYEP----SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+Q GC+PN +++ + D AF L +K +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 468 LGEDYDGNTDRISNMEH--------KDKQSITNTPNFVPNS----------HYSSFDKRF 509
+ ++ D + H K+ ++ PN V S +S +
Sbjct: 185 V-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 510 S------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
S P T+N L+ A + V+A L ++M + P+ ++ LI+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A Q+ + M PD+ Y T IK +SKR++ LF EM H + + VTY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TL++ G Q+ V++ M G + L++ C
Sbjct: 364 TTLIQGLFHDGDCDNAQK---VFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 148 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 378
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 379 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK P+ TY TL+RA R G
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 156 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 210
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 211 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 325
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 326 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 382
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 383 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 495
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 367
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 368 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 459
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 460 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 483
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 484 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 610 K 610
+
Sbjct: 527 R 527
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R TYNIL+ C + AL+ +M +G P+ ++ + L++ +
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A+ ++ M E G PD + +TT I + +A +L + M QPNLVTY +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + G ++ + M A +A+ +I+ C+
Sbjct: 157 VNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 163/386 (42%), Gaps = 37/386 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ M + G+ D +Y IL+ C A T LA ++ H + KG K DVFTY
Sbjct: 97 VQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL-----HEKMKGNCKGDVFTYGM 151
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ AL + +M+ AG+ P+ + +SSL++ G +++A+ F+EM G
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211
Query: 429 CEPNSQCCNILLQACVEACQF-----------DRAFRLFRSWTLSKTQVAL-GEDYDGNT 476
+ N L+ A + DR F ++T + L E G
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP-DAFTFTILIDGLCKEGKVGEA 270
Query: 477 DRISN-MEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+I M HK K+ T N + N + S R K +YNIL+
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILIN 329
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D +A L EMR GL P+ +++ LI A SG V A ++ M+ G
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ Y + ++ L++A LF+ +K + +PN+ + LL R G L E +
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK-- 447
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWC 667
+ ++ K G + + LI C
Sbjct: 448 -QFDEISKNGLEPDTIAYNILINGLC 472
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 178/408 (43%), Gaps = 48/408 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLE 310
P++ + +++D G+C G ++ ++++ + ++ ++Y +NSL++ ++ L +
Sbjct: 179 PDVVVYSSLMD--GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT 236
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ N M G D ++ IL+ C G AQ+I E+ H + K + D+ TY+T+
Sbjct: 237 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL-ELMHHKGK---EPDILTYNTL 292
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A K+ E + G+ N +++ LIN +++A LFEEM G
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-- 487
+P++ N L+ A ++ + A +LF + L Y D + H ++
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL-STYCVLLDGLCKNGHLEEAI 411
Query: 488 ---QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
QSI K+ KP ++IL+ C +A +E+
Sbjct: 412 DLFQSI----------------KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++ ILI+ G + A+++L M E G PD + + I+ ++ + +A
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L EEM++ P+ LL CLA + W A
Sbjct: 516 IQLLEEMRNRNFSPDEAVTSMLL--------------CLASFDPQWHA 549
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 61/350 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + +ID G+C G +++ I E + + +I +N+LMN L+
Sbjct: 248 SPDAFTFTILID--GLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++++ G+ ++ SYNIL+ C A ++ E++ KG LK TY+T
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR---PKG-LKPSTVTYNT 361
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K+ +M + G T+ L++ G +E+A+ LF+ + +
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN + +ILL A + + A++ F D IS
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQF--------------------DEIS-------- 453
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +P T YNIL+ C +A L+ +M G P
Sbjct: 454 -------------------KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ I++ ++I + A+Q+L+ MR SPD T++ +C+ S
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD--EAVTSMLLCLAS 542
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 517 TYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
TY IL+ C A+ ++E + ++ ++ID+ G AL + M
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI 173
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PDVV Y++ + R RLK+A F+EM+ I ++ TY +L+ SR G
Sbjct: 174 GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWK 233
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
EV L + D G+ + LI+ C EG + + Q
Sbjct: 234 EVTWFLNLMVD---RGFSPDAFTFTILIDGLCKEGKVGEAQQ 272
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +NSL+N A + ++ M + V+ D+ SY+IL+ C A+++Y
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L +V TY+ + A V E+M+SAG +P+ IT+S+LI+
Sbjct: 182 QMIDLNCVP----NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ A +QA LFE M+ GC PN+ N LL + + D A LFR V
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM------VER 291
Query: 469 GEDYDGNTDR-----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G D D T N+ K +Q++ V H P YN L+K
Sbjct: 292 GCDPDKVTYTTLLYGFCNV-GKIEQAVEVFDEMVSKGH----------DPDVVAYNCLLK 340
Query: 524 ACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++R + L M + P+ +S I+ID + ++ A+++ + M +D
Sbjct: 341 G----FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 396
Query: 578 -GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G SPD+V Y + I +RL +A +F+E+ ++ P+ + LL A
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 52/307 (16%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN LL + C A A I+ + + + V+ DV +YS ++ F A K+
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTM--VSERSVVP-DVVSYSILIDGFCKIDELGRAEKL 179
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M+ PN T+++ +N G + A ++EEM+ AGC P+ + L+
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + D+A LF + ++ G
Sbjct: 240 ARKHDQAHELFEAM------ISRG------------------------------------ 257
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+P TYN L+ C + +A L +M G P+ +++T L+ G
Sbjct: 258 -----CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E A+++ M G PDVVAY +K R+ + +A LF+ M + +P+ V++
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372
Query: 624 LLRARSR 630
++ S+
Sbjct: 373 MIDGLSK 379
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 50/338 (14%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTY 366
L + + M K G DMA++++L+ C A AQE + G + + + F+Y
Sbjct: 68 ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRAS---SCFSY 124
Query: 367 STIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++++ AK A + M+S V P+ +++S LI+ + +A L+++M+
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C PN N L L R ++ Q ++
Sbjct: 185 DLNCVPNVTTYNAFLNG------------LMRKGRIADAQGV----------------YE 216
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ S +P+ + YS+ FS + + L M + G
Sbjct: 217 EMISAGCSPDVIT---YSTLIHGFSLA--------------RKHDQAHELFEAMISRGCR 259
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ L+ + A ++ + M E G PD V YTT + +++QA +
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
F+EM P++V Y LL+ R G E +Q V
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
G ++ +YE++ S + ++ +++L++ HD E+++ M G +
Sbjct: 206 GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH--ELFEAMISRGCRPNAV 263
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN LL C A E++ + + +G D TY+T++ F + + A++V
Sbjct: 264 TYNCLLHGLCKESKPDEAHELF---RKMVERGC-DPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+S G P+ + ++ L+ AG +A LF+ M+ C+P++ NI++ +
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK 379
Query: 446 ACQFDRAFRLF 456
A + D A +F
Sbjct: 380 AKRLDDAVEVF 390
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 397 NTITWSSLINACANAGLVEQAMH---LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
N + W++ + +G +EQA +E L + P+S C+ ++Q +A + D A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 454 RLF-----RSWTLSKTQVALGEDYDGNTDRISNMEH---------KDKQSITNTPNFVPN 499
L R + ++ + D+I + + S + N + N
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 500 S-------H-----YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S H +S+ S P +Y+IL+ C + R + L +M +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ ++ G + A + + M G SPDV+ Y+T I +++ QA L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE M +PN VTY LL + E + +++ M + G + L+
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHE---LFRKMVERGCDPDKVTYTTLLYG 306
Query: 666 WC 667
+C
Sbjct: 307 FC 308
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 160/363 (44%), Gaps = 50/363 (13%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G D+ +YNIL+ C G+ A+++ V + +G + +V TY+ +V
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL---VNEMSRRGC-EPNVITYAILVNG 434
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + A V +M + G+T N++ ++ LI A V A++L EM GC+P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N L+ + + D AFRLF + L DG ++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLL-----------DG--------------AVAN 529
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTT---------------TYNILMKACCT--DYYRVKAL 535
N N+ + +R +F+ T TYN L+KA C + + L
Sbjct: 530 --NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M GL + IS I+I+ G V+ A + L+ G PD+V Y + + +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
R+K+A +LF+ ++ ++P+ TY T + + + G +++ CL Y+ + +N
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA--CLFFYRGIENGFVPSN 705
Query: 656 DTY 658
T+
Sbjct: 706 LTW 708
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 163/394 (41%), Gaps = 34/394 (8%)
Query: 276 RAIY---EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
RA+Y +S ++ L I V + V + V+ +M GV + ++ I++K
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATN-------VFYDMLSKGVSPTVFTFGIVMK 226
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C+ A + ++ + G + + Y T++ + ALK+ E+M
Sbjct: 227 ALCMFNEVDSACSL---LRDMTKHGCVP-NSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ T++ +I+ + A L + ML G P++ LL + + A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + L +G + + + K+ QS N F F+
Sbjct: 343 RKILIKIPCPNNAI-LNTLING---YVMSGQLKEAQSFLNETMI-----------NFGFQ 387
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNILM C + + L+NEM G PN I++ IL++ +G +E A +
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G++ + V Y I R +++ A +L EM +P+L TY +L+ +
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ + + ++ +M G AN+ LI
Sbjct: 508 ---VDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 67/382 (17%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
RDLV+ + + PN+ +++ G+C G ++ + ++ ++ +T+N
Sbjct: 410 RDLVNEM------SRRGCEPNVITYAILVN--GLCKAGLLEEAGLVLHEMSARGLTINSV 461
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+ + L + M G D+ +YN L+ C E +
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI---DEAFRLF 518
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
++ G + +V TY+T++ +Q AL + DML G T + IT++ LI A
Sbjct: 519 HNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + L+E+M+ G ++ CNI++ + + D AF R
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR------------- 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D I+ F P TYN ++ C
Sbjct: 625 ------DAINR----------------------------GFVPDIVTYNSVLNGLC-KVG 649
Query: 531 RVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K +N ++ G+ P+ ++ I G V A E+G P + +
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ + F + +E+
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 535 LMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ +MR V L P S+ ++++ + A + M G+SP V + +K
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ A SL +M + PN + Y TL+ A S+ ++V + L + ++M+ G
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK---NQVSEALKLLEEMFVMGCM 285
Query: 654 ANDTYLKELIEEWCE 668
+ ++I C+
Sbjct: 286 PDVQTFNDVIHGLCK 300
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 147/370 (39%), Gaps = 62/370 (16%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + E++ M + G++ + +YN L+ AC G AQE++
Sbjct: 154 VKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMW------------ 201
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ M++ + PN IT++S+I G + A
Sbjct: 202 ---------------------------DQMVARQIDPNVITYTSMICVLCEEGCIGDAER 234
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNT 476
LF+ M +AG PN N+L+ + + AF L++ L V DG
Sbjct: 235 LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC 294
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
E KD + P RF PT YN LM D +
Sbjct: 295 KAKRFSEAKDM--FRDMP-------------RFGVAPTVPVYNSLMDGAFRSGDAQEALS 339
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM +GL P+ + +I++ G ++ A + L+ +REDG++ + AY I
Sbjct: 340 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+ L++A + M ++PN+V+Y +L+ S+ G + Q +A+Y +M G +
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKM---QIAMAIYTEMVAKGIEP 456
Query: 655 NDTYLKELIE 664
N LI
Sbjct: 457 NVVTYTALIH 466
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 194/469 (41%), Gaps = 49/469 (10%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + K R A +D + P++ T+I+ C G K++ +++ +
Sbjct: 146 CNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMV 205
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + N+ + S++ V + + ++ M++ G+ + +YN+L+ C +
Sbjct: 206 ARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVN 265
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +Y E+ + G++ + ++T++ F AK + A + DM GV P +
Sbjct: 266 SAFVLYQELLN---SGLIP-NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVY 321
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SL++ +G ++A+ L++EM + G P+ C+I+++ + Q A R +
Sbjct: 322 NSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEG--V 379
Query: 462 SKTQVAL-GEDYDGNTD---RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ V L Y+ D R N+E T +P +
Sbjct: 380 REDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT--------------EVGVEPNVVS 425
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ L+ A+ EM G+ PN +++T LI +G ++ A + K M
Sbjct: 426 YSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMI 485
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE---MKHYQIQ--------------PNL 618
E+G+SP+ + + + R R++ A E +K+ I PN
Sbjct: 486 ENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNS 545
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y+TL+ G +E + ++ M K+G ++ LI C
Sbjct: 546 AIYMTLIYGLYLDGQHYEAGK---LFSYMRKSGMISDSFTYTLLIRGQC 591
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 37/349 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T+ID G C + +++ ++ D+ V + V+NSLM+ + D + L
Sbjct: 281 PNAVVFTTLID--GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y+ M +LG+ D + +I+++ C G +A V+ GV L+ Y+ +
Sbjct: 339 SLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE---DGV-NLNAAAYNAL 394
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + AL M GV PN +++SSLI+ + G ++ AM ++ EM+ G
Sbjct: 395 IDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISN--- 481
EPN L+ + D AFR + +S + + DG +R+ +
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVR 514
Query: 482 --MEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----PTTTTYNILMKACCTD--YYRV 532
MEH + S SF F+ + P + Y L+ D +Y
Sbjct: 515 FVMEHSG----------IKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEA 564
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
L + MR G+ + ++T+LI G V A+ + M + G+ P
Sbjct: 565 GKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 34/275 (12%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+ A + GL+++A+++F + P CN +L V+A + A+ LF L +
Sbjct: 117 LVIALSQMGLLDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDE-MLRR 172
Query: 464 TQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYN 519
V Y+ N R K ++ +D+ + P TY
Sbjct: 173 GMVPSVVTYNTLINACRYQGAVAKAQEM---------------WDQMVARQIDPNVITYT 217
Query: 520 ILM-----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ + C D R L + M+ G+ PN ++ +L+ +V A + + +
Sbjct: 218 SMICVLCEEGCIGDAER---LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL 274
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ P+ V +TT I ++KR +A +F +M + + P + Y +L+ R G
Sbjct: 275 LNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSG-- 332
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ Q+ L++YQ+M + G ++ ++ C+G
Sbjct: 333 -DAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDG 366
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 217/538 (40%), Gaps = 97/538 (18%)
Query: 196 RIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE-----FGKKRDLVSALRAYDASKKH 250
+ +Q V D+ AI + R + FV K++ + A + +D
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246
Query: 251 LSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
+PN T+ID G C G ++ I E ++ +NV I FNSL+N A ++
Sbjct: 247 RVAPNRITYNTLID--GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMME 304
Query: 307 FTLEVYKNMQKLGVMADMASY-----------------------------------NILL 331
V + M+ G + D +Y +ILL
Sbjct: 305 EAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL 364
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C GN A+E+ +K G+ + VF ++TIV + A E M +
Sbjct: 365 NALCKEGNMEKAEEV---LKKFLENGLAPVGVF-FNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN +T++SL+ +E+A ++M++ G PN + N L+ +C FDR
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 452 AFRLFRSWT---LSKTQVALG-----EDYDGNTDR----ISNMEHKDKQSITNTPNFVPN 499
F++ L ++ G D N + +M H+ VPN
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR---------GVVPN 531
Query: 500 SH------------------YSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKA--LMN 537
+ + FD+ + + PT TYNIL+ C ++A L +
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
E+ GLS + I++ LI +GNV+ AL++ + M++ G+ P + Y I C + +
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-E 650
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L +++EM + P+ V Y L+ +G +VQ+ +++ M G + +
Sbjct: 651 GLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHG---DVQKACSLHSAMEAQGIQPD 705
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 44/388 (11%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V DLK +E+ M++ GV + YN+++ C A++++ E+ L+ + +
Sbjct: 193 VKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEM--LDRR--V 248
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ TY+T++ + + A ++E M V P IT++SL+N A ++E+A
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQR 308
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY------- 472
+ EEM G P+ L ++ D + L Q+ DY
Sbjct: 309 VLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL---DYTCSILLN 365
Query: 473 ----DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT- 527
+GN ++ + K F+ N P +N ++ C
Sbjct: 366 ALCKEGNMEKAEEVLKK----------FLENG----------LAPVGVFFNTIVNGYCQV 405
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + + +M VGL PNH+++ L+ N+E A + +K M E G+ P+V Y
Sbjct: 406 GDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I RS + F + EEM+ ++PN+++Y L+ + ++ E + L D
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG---D 522
Query: 647 MWKAGYKANDTYLKELIEEWC-EGVIQD 673
M G N LI+ C G ++D
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKD 550
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 187/434 (43%), Gaps = 35/434 (8%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y C +++ G+ K+ + + + FN+++N D+ +
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ +G+ + +YN L+K C N A++ +K + KGVL +V TY+T++ +
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC---IKKMVEKGVLP-NVETYNTLIDGYG 473
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + ++ E+M G+ PN I++ LIN C +A ++E A + +M+ G PN+
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILE-AEVILGDMVHRGVVPNA 532
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQS- 489
Q N+L+ A + AFR F + T V +G + ME ++ S
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE 592
Query: 490 ITN--------TPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCTD-Y 529
IT T N + + + S+ + K+ KPT TY+ L+ C +
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL 652
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
V+ + EM + L P+ + + LI G+V+ A + M G+ PD + Y
Sbjct: 653 VLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCL 712
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + R+ + +L +MK + P TY L+ + L + Y++M++
Sbjct: 713 ILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCK---LKDFDGAYVWYREMFE 769
Query: 650 AGYKANDTYLKELI 663
G+ + + LI
Sbjct: 770 NGFTPSVSICDNLI 783
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 203/501 (40%), Gaps = 78/501 (15%)
Query: 96 SVVVSEGNVSKFASMLSLEMVASGIVKSI-REGRIDCVVGVLKKLNELGVAPLELFDGSG 154
S+ +SE V K +L + S ++ ++ +EG ++ VLKK E G+AP+ +F +
Sbjct: 341 SITLSEEAVRKGVQIL--DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT- 397
Query: 155 FKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYA 214
++ CQ G++ +E +E L + + + C K N+
Sbjct: 398 --IVNGYCQ----VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK---NMEEAEK 448
Query: 215 CI--------VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
CI +P + + + +G+ + + +K PN+ +I+
Sbjct: 449 CIKKMVEKGVLPNVET-YNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL 507
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADM 324
+ +++ I D+ + V N ++N L++ + A LK + M ++ +
Sbjct: 508 CKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YNIL+ C G + A+ + E+ KG L DV TY++++ ++ A Q AL+
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITR---KG-LSFDVITYNSLISGYSSAGNVQKALE 623
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E M +G+ P T+ LI C GLV +++EMLQ P+ N L+ V
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYV 682
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E +A L S ME + Q
Sbjct: 683 EHGDVQKACSLH-----------------------SAMEAQGIQ---------------- 703
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P TYN L+ + ++VK L+N+M+ GL P ++ ILI
Sbjct: 704 --------PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755
Query: 563 NVEGALQILKIMREDGMSPDV 583
+ +GA + M E+G +P V
Sbjct: 756 DFDGAYVWYREMFENGFTPSV 776
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 160/369 (43%), Gaps = 25/369 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M+K GV+ +AS N+ L++ +++ E+ + L+ D F Y
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI----VESGLRPDQFMYGKA 188
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+++ M GV+P ++ +I ++ A LF+EML
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
PN N L+ + Q + AF + + + T + +G R ME
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLC-RAQMMEEAQ 307
Query: 487 K-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ FVP+ RF++ TT ++ +K C + L E G+
Sbjct: 308 RVLEEMEVYGFVPD--------RFTY---TTLFDGHLK--CGNVDASITLSEEAVRKGVQ 354
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +IL++A GN+E A ++LK E+G++P V + T + + + +A++
Sbjct: 355 ILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTT 414
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
E+M+ ++PN VTY +L++ ++ E ++C+ + M + G N LI+
Sbjct: 415 IEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI---KKMVEKGVLPNVETYNTLIDG 471
Query: 666 WCEGVIQDK 674
+ + D+
Sbjct: 472 YGRSCLFDR 480
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 40/185 (21%)
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSP 546
+ +P P+ Y+ F S P ++ ++ + C++ V L M+ G+ P
Sbjct: 88 LPKSPFSSPSHLYTLFS--LSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLP 145
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV------------ 594
+ S + +++ + E LQ+ + E G+ PD Y AI+ V
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM 205
Query: 595 -----------------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ KR+K A LF+EM ++ PN +TY TL+ +
Sbjct: 206 TCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV 265
Query: 632 GSLHE 636
G L E
Sbjct: 266 GQLEE 270
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 216/510 (42%), Gaps = 41/510 (8%)
Query: 195 FRIVQLCVN-KPDVNLAIRYACIVP-RADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
R+ C+ +P ++A+R +P R + +C V A + +D
Sbjct: 128 IRLRSFCLTARP--HIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV 185
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
PN+ ++ GD +++ + + + +++N++ +N + A L +
Sbjct: 186 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 245
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ V D+ +YN L++ C + QE ++ + +G L D FTY+TI+
Sbjct: 246 LVDGMRAYAV-PDVVTYNTLIRGLC---KKSMPQEAMHYLRRMMNQGCLP-DDFTYNTII 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q A ++ +D + G P+ +T+ SLIN G VE+A+ LF E G +
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQS 489
P+ N L++ A ++ + + Y+ + + M + D
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI-QTYNIVINGLCKMGNISDATV 419
Query: 490 ITNT-------PN-FVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACC 526
+ N P+ F N+ + KR + P T TYN ++ C
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 479
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
V EM G PN I++ ILI+ S +E A +++ M ++G+ PD V
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 539
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
++ T I R+ L+ A+ LF++++ T+ TL+ A S ++H ++ ++
Sbjct: 540 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK---IF 596
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+M G++A+ + LI+ C+ D+
Sbjct: 597 DEMLSKGHRADSYTYRVLIDGSCKTANVDR 626
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 183/421 (43%), Gaps = 48/421 (11%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++ + +I V+NSL+ + L+V M + G
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLP-DVFTFNTLIDGYCKRLKLDSA 452
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M G+ P+TIT++S++N AG V + F+EM+ GC PN NIL++
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 512
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH 501
+ + + A SK V + ++ H D S T F N
Sbjct: 513 FCRSNKMEEA---------SKVIVKMSQE----------GLHPDAVSFNTLIYGFCRNGD 553
Query: 502 ----YSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y F K + T T+N L+ A + + + + +EM + G + ++ +
Sbjct: 554 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 613
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID + NV+ A L M + G P + + I + R+ QA + M
Sbjct: 614 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
+ P +V T+L A + E+ + +D+ K G+ + TY E EGV +
Sbjct: 674 VVPEVVD--TILNADKK-----EIAAPKILVEDLMKKGHISYPTY-----EVLHEGVRDN 721
Query: 674 K 674
K
Sbjct: 722 K 722
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 141/386 (36%), Gaps = 80/386 (20%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L++ HD +VY M GV D+ ++ I L++ CL +A + + H
Sbjct: 94 IMDALVDAAYHDQAH--KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH 151
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
A Y T+V A ++ + ML V PN ++ +++A G
Sbjct: 152 RGA--------VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 203
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A L +++Q G N NI ++ EA + A RL
Sbjct: 204 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV---------------- 247
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
DG R P TYN L++ C
Sbjct: 248 DG--------------------------------MRAYAVPDVVTYNTLIRGLCKKSMPQ 275
Query: 533 KAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+A+ + M G P+ ++ +ID V+ A ++LK G PD V Y + I
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHEVQQCLAVYQDMWK 649
+++A LF E + I+P++V Y +L++ G LH +Q
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ----------- 384
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKN 675
+ E+ EE C IQ N
Sbjct: 385 --------VMNEMAEEGCHPDIQTYN 402
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ P YN +M A Y +A + M G+SP+ + TI + + +
Sbjct: 82 FACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHI 141
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L+ + G VAY T + A LF++M H + PNL + +L
Sbjct: 142 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 197
Query: 627 ARSRYGSLHE 636
A + G + E
Sbjct: 198 ALCKRGDVLE 207
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 18/320 (5%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ +E G +K D +++I+ F+++ + A+K+ M +G P T T+++LI
Sbjct: 71 ISKVEENG-MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYG 129
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
NAG E+A+ L E + G +PN + NIL++A + A W + VA G
Sbjct: 130 NAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEA------WNMVYKMVASG 183
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D T + +K + ++R + P T +I++ C +
Sbjct: 184 MQPDAVTYNTLARAYAEKGETIRAEEMI----LEMLNRRVT--PNERTCSIIVNGYCKEG 237
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V A + M+ +G+ PN + LI + + EG ++L +M E+G+ PDVV ++
Sbjct: 238 NMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFS 297
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + + R+ + +F +M +I+P++ + L + R G E ++ ++ M
Sbjct: 298 TIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAG---EPEKAESILTSM 354
Query: 648 WKAGYKANDTYLKELIEEWC 667
K G N +I WC
Sbjct: 355 RKYGVHPNVVICTTVISGWC 374
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 176/379 (46%), Gaps = 25/379 (6%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNS++N + ++K +++++ M++ G +++N L+K AG T +E +
Sbjct: 85 LFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKT---EEALKLL 141
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L+ GV K + TY+ +V+ + + + + A + M+++G+ P+ +T+++L A A
Sbjct: 142 EFLQDGGV-KPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAE 200
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALG 469
G +A + EML PN + C+I++ C E D + +FR L L
Sbjct: 201 KGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELG----VLP 256
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
+ N+ ++ D + + + + +P T++ +M A +
Sbjct: 257 NLFVFNSLIKGFLDTMDTEGVDEVLTLMEEN---------GVRPDVVTFSTIMNAWSSAG 307
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ K + N+M + P+ +++IL +G E A IL MR+ G+ P+VV T
Sbjct: 308 RMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICT 367
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I + +++ A ++E+M + PNL TY TL+ YG + + + Q M
Sbjct: 368 TVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWG---YGEAKQPLKAEELLQVM 424
Query: 648 WKAGYKANDTYLKELIEEW 666
+ G ++ + + W
Sbjct: 425 EEKGVFPKKGTMQLIADAW 443
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + R + +K + + A +PN C I++ G C G+ + +
Sbjct: 189 VTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVN--GYCKEGNMVDASRFV 246
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ V N++VFNSL+ ++ D + EV M++ GV D+ +++ ++ A A
Sbjct: 247 FRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSA 306
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +EI+ ++ K ++ D+ +S + K + A + A + M GV PN
Sbjct: 307 GRMDKCKEIFNDM----VKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPN 362
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +++I+ +AG +E AM ++E+M + G PN + L+ EA Q +A L +
Sbjct: 363 VVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQ 422
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 35/271 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
ILF + + F + ++ A++ + K+ P T+I G G ++ + E
Sbjct: 84 ILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEF 143
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ V N +N L+ N +++ + M G+ D +YN L +A G
Sbjct: 144 LQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGE 203
Query: 340 TVLAQEIYGE--------------------------------VKHLEAKGVLKLDVFTYS 367
T+ A+E+ E V ++ GVL ++F ++
Sbjct: 204 TIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLP-NLFVFN 262
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++K F D + +V M GV P+ +T+S+++NA ++AG +++ +F +M++A
Sbjct: 263 SLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKA 322
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
EP+ +IL + V A + ++A + S
Sbjct: 323 EIEPDIHAFSILAKGYVRAGEPEKAESILTS 353
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ N + G P I++T L+ A + L+++ + E+GM PD + + + I
Sbjct: 34 SIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAF 93
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S +K+A LF +MK +P T+ TL++ G E + L QD G K
Sbjct: 94 SESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQD---GGVK 150
Query: 654 ANDTYLKELIEEWC 667
N L+ WC
Sbjct: 151 PNQRTYNILVRAWC 164
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ TI++ G K + I+ D+ + +I+ F+ L V A + + +
Sbjct: 291 PDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESI 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+K GV ++ ++ C AG A ++Y ++ + LK TY T++
Sbjct: 351 LTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLK----TYETLIW 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ +AK A ++ + M GV P T + +A GL+ ++
Sbjct: 407 GYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSES 452
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/551 (19%), Positives = 232/551 (42%), Gaps = 100/551 (18%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R G++ AL+ D S ++ C TI+ G Y ++ A++E ++ +
Sbjct: 204 IRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGL 263
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ +N +++V L++ M+ G+ D + + ++ AC G A+
Sbjct: 264 SPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAK 323
Query: 345 EIYGEVK-----------------------HLEAKGVLK--------LDVFTYSTIVKVF 373
E + E+K + EA +LK LD TY+ +V +
Sbjct: 324 EFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAY 383
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A +++ V + M GV PN +T++++INA AG +A+ LF +M ++GC PN
Sbjct: 384 VRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNV 443
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVALGEDYDGNTDRISNMEH 484
N +L + + + ++ ++ T +A+ D G ++++
Sbjct: 444 CTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGD-KGKHKFVNHVFR 502
Query: 485 KDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC--T 527
+ K N+ S++ + + F P TTYN L+ A
Sbjct: 503 EMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRG 562
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK------------IMR 575
D+ ++++ +MR G PN S+++++ GNV G +I K ++R
Sbjct: 563 DWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLR 622
Query: 576 -----------------------EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++G PD+V + + + + ++ ++A + + ++
Sbjct: 623 TLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRES 682
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVI 671
+QP+LVTY +L+ +R G + ++ L + + K+G + +I+ +C +G++
Sbjct: 683 GLQPDLVTYNSLMNMYARRGECWKAEEIL---KGLIKSGESPDLVSYNTIIKGFCRQGLM 739
Query: 672 QDKNQNQGEVT 682
Q+ + E+T
Sbjct: 740 QEAIRVMSEMT 750
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 184/428 (42%), Gaps = 41/428 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN T+I+ G G +K+ ++ ++ N+ +NS++ + + +++
Sbjct: 406 PNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKI 465
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N LL C G ++ E+K+ + T++T++
Sbjct: 466 LSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCG----FEPGKDTFNTLIS 521
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+ AG TP T+++L+NA A G + A + +M G +P
Sbjct: 522 AYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKP 581
Query: 432 NSQCCNILLQACVEACQFDRAFRL---------FRSWTLSKTQVALGEDYDGNTDRISNM 482
N +++L + R+ F SW L +T + + + M
Sbjct: 582 NETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILA----NFKCRAVRGM 637
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E ++ + N +KP +N ++ + Y R + +++ +R
Sbjct: 638 ERAFEELMKN-----------------GYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIR 680
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL P+ +++ L++ G A +ILK + + G SPD+V+Y T IK R ++
Sbjct: 681 ESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQ 740
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A + EM I P + TY T + + G EV + ++ M + K N+ K
Sbjct: 741 EAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISY---MIQKNCKPNELTYK 797
Query: 661 ELIEEWCE 668
+++ +C+
Sbjct: 798 IIVDGYCK 805
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + RT+I C +E+L ++ +FNS++++ A + +Y+
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKN-----NMYE 670
Query: 314 NMQKL-------GVMADMASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFT 365
QK+ G+ D+ +YN L+ G A+EI G +K E+ D+ +
Sbjct: 671 RAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESP-----DLVS 725
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+TI+K F Q A++V +M + G+ P T+++ ++ A G+ + + M+
Sbjct: 726 YNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMI 785
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA 452
Q C+PN I++ +A ++ A
Sbjct: 786 QKNCKPNELTYKIIVDGYCKARKYQDA 812
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN 301
RA++ K+ P+M I +++ + Y +++ + + +R + ++ +NSLMN+
Sbjct: 639 RAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMY 698
Query: 302 AH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + E+ K + K G D+ SYN ++K C G L QE + + +G+
Sbjct: 699 ARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQG---LMQEAIRVMSEMTTRGIC 755
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+FTY+T V +A + +V M+ PN +T+ +++ A + AM
Sbjct: 756 PC-IFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMD 814
Query: 420 L 420
Sbjct: 815 F 815
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ + A + YD K +P +++ GD+ + ++ D+R
Sbjct: 516 FNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMR 575
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ N F+ +++ A +++ + K++ + +LL+ LA
Sbjct: 576 NKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSW----VLLRTLILANFKC 631
Query: 342 LAQEIYGEVKHLEA--KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + G + E K K D+ +++++ +FA ++ A K+ + + +G+ P+ +
Sbjct: 632 RA--VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+N A G +A + + ++++G P+ N +++ A R+
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 460 T 460
T
Sbjct: 750 T 750
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 206/493 (41%), Gaps = 37/493 (7%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF-----GKKRDLVSALRAYDASK 248
F I Q+ D NL V AD+L + +F G D+ S L +K
Sbjct: 163 HFEIAQIMA---DFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLL-----AK 214
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K L P++ C ++ + KS +Y+ + + ++++F++++N H
Sbjct: 215 KGLF-PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHRED 273
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ ++ M+KLGV ++ +YN ++ C +G E Y K K + + TY
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRL---DEAY-RFKEKMVKEKVSPSLITY 329
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S + + A V ++M G PN + +++LI+ G + +A+ + ++ML
Sbjct: 330 SVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLS 389
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PNS N L+Q ++ Q +A + +G N S + +
Sbjct: 390 KGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM--------IGRGLPINQGSFSMVIN-- 439
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
+ FV H+ + +P L+ C + +A L + G
Sbjct: 440 --WLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF 497
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++ LI +GN++ L++L+ M E G+ D + Y T I C + ++K+ F
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFE 557
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L EEM IQP++ T+ LL + E + ++ + K GY N +I+
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR---LWHECKKNGYVPNVYTYGVMID 614
Query: 665 EWCEGVIQDKNQN 677
+C+ ++ +N
Sbjct: 615 GYCKANKVEEGEN 627
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 130/572 (22%), Positives = 247/572 (43%), Gaps = 62/572 (10%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y ++ L K GRL+E E +V + VS S+++ + +G++K + +CV
Sbjct: 294 YNNIIHGLCKSGRLDEAYRFKEKMVKEK--VS--PSLITYSVFINGLIKLEKIDEANCV- 348
Query: 134 GVLKKLNELGVAPLELFDGS---GFKLLKNECQRL------LDSGEVEMFVGLMEVLEEF 184
LK+++ELG P E+ + G+ + N + L L G V L +++ F
Sbjct: 349 --LKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGF 406
Query: 185 RLP-----VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + EE L +N+ ++ I + C+ R + +F+RE L+
Sbjct: 407 CKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF-VTALHFIREM-----LLR 460
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
LR PN + T++ G+C G ++ ++ L + NI N+L
Sbjct: 461 NLR-----------PNDGLLTTLVS--GLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL 507
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A +++ TL++ ++M + G++ D +YN L+ CC G +E + E+K
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK---VKEGF-ELKEEMV 563
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K ++ D++T++ ++ +A A ++ + G PN T+ +I+ A VE
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVE 623
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+ +L E++ E NS N L++A + AFRL R S+ + Y
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRL-RDDMKSRGVLLSCATYSSL 682
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK 533
+ N+ D H ++ P Y ++ +V
Sbjct: 683 MHGLCNIGLVDDA-----------KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ EM + + PN ++TI+ID G + A ++L M E G+ PD V Y
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ ++++AF + +EM + + +TY TL+
Sbjct: 792 CKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 188/440 (42%), Gaps = 41/440 (9%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
VP ++++ + + K ++ AL+ D SPN ++I G C
Sbjct: 357 FVPN-EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQ--GFCKSDQIG 413
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
+A + E++ + + +N F+ ++N +F L + M + + L+
Sbjct: 414 QAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLV 473
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG A E++ L KG + ++ T + ++ A Q LK+ DML
Sbjct: 474 SGLCKAGKQGEAVELWCR---LLGKGFVP-NIVTSNALIHGLCKAGNMQETLKLLRDMLE 529
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ + IT+++LI+ C G V++ L EEM++ G +P+ N+LL A + D
Sbjct: 530 RGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589
Query: 452 AFRLFRSWTLSKTQVALGEDY------DG--NTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A RL W K + Y DG +++ E+ + ++
Sbjct: 590 ASRL---WHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK----------- 635
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
+ + YN L++A C + A L ++M++ G+ + +++ L+
Sbjct: 636 ------KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNI 689
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V+ A +L MR++G+ P+VV YTT I + ++ + + +EM + I PN TY
Sbjct: 690 GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTY 749
Query: 622 ITLLRARSRYGSLHEVQQCL 641
++ + G E + L
Sbjct: 750 TIMIDGFCKLGKTKEAAKLL 769
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + +Y I++ C G T A ++ E + KG+L D TY+
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE---MTEKGILP-DAVTYNAFT 788
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ A KV ++M S V + IT+++LI+ C
Sbjct: 789 NGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 183/428 (42%), Gaps = 51/428 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K+ DL A +A+ ++ + SP++Y T+I G+C G K+ + +D+++ + +
Sbjct: 170 KRVDL--AEKAFRSALRRRVSPDIYTFNTVIS--GLCRIGQLRKAGDVAKDIKAWGLAPS 225
Query: 291 IYVFNSLMN-----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+ +NSL++ A ++ + K M + G+ ++ +L+ C NT A
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E+K +G+ V TY++++ + +K+ E+M G++PN IT+ ++
Sbjct: 286 VFEEMKQ---QGI-AASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G++ A + M + EP+ NIL+ ++R +
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILID-------------VYRRLGKMEDA 388
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPT 514
+A+ E M K T N + S D K +
Sbjct: 389 MAVKE----------AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 515 TTTYNILMKA-CCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN+L+ A CC R L++EM VGL PNH+++ +I GN++ A +I
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + +VV Y IK + ++ +A L EM + PN +TY T+ G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Query: 633 SLHEVQQC 640
+++ C
Sbjct: 559 YTPDIRGC 566
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 161/384 (41%), Gaps = 44/384 (11%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + + +++ + V D+ ++N ++ C G A ++ K ++A G L
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV---AKDIKAWG-L 222
Query: 360 KLDVFTYSTIVKVF----ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLV 414
V TY++++ + + + + +KE M+ AG++P +T+ LIN C N+
Sbjct: 223 APSVATYNSLIDGYCKKGGAGNMYHVDMLLKE-MVEAGISPTAVTFGVLINGYCKNSN-T 280
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGED 471
A+ +FEEM Q G + N L+ + + +L LS ++ G
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G K + + +++ +R + +P YNIL+ D YR
Sbjct: 341 LKGFC---------KKGMMADANDWI-----DGMTER-NVEPDVVIYNILI-----DVYR 380
Query: 532 -------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
A+ M G+SPN ++ LI SG+ A +L M+E G+ DVV
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV 440
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y I +++A L +EM ++PN +TY T+++ G++ + +
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE---IR 497
Query: 645 QDMWKAGYKANDTYLKELIEEWCE 668
M K +AN I+ +C+
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQ 521
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 142/366 (38%), Gaps = 91/366 (24%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-- 419
D++T++T++ + A V +D+ + G+ P+ T++SLI+ G H
Sbjct: 190 DIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 420 -LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L +EM++AG P + +L+ + A R+F
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF---------------------- 287
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
E +Q I + TYN L+ C++ + LM
Sbjct: 288 ----EEMKQQGIA---------------------ASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 537 NEMRTVGLSPNHIS-----------------------------------WTILIDACGGS 561
EM +GLSPN I+ + ILID
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A+ + + M + G+SP+V Y I RS + A L +EMK I+ ++VTY
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGE 680
L+ A G EV++ + + +M + G + N +I+ +C+ G I+ + +
Sbjct: 443 NVLIGALCCKG---EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 681 VTLCRR 686
+ CR+
Sbjct: 500 MEKCRK 505
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 142/333 (42%), Gaps = 63/333 (18%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
AS+++ + SG+ EG+++ V +++++ +LG++P E+ G +LK C++ +
Sbjct: 297 ASVVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGC---VLKGFCKKGMM 350
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+ + G+ E R V+ PDV + Y ++ +
Sbjct: 351 ADANDWIDGMTE----------------RNVE-----PDV---VIYNILI--------DV 378
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R GK D A+ +A K SPN+ +I GD+ + + ++++ + +
Sbjct: 379 YRRLGKMED---AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +N L+ +++ +++ M ++G+ + +YN +++ C GN A E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I ++ + +V TY+ +K F A + +ML + PN IT+ +
Sbjct: 496 IRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET-- 549
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ E M++ G P+ + C +
Sbjct: 550 --------------IKEGMMEKGYTPDIRGCTV 568
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ S L+ G+ V+ A + + +SPD+ + T I R +L++A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+++K + + P++ TY +L+ + G + + ++M +AG LI
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 666 WCE 668
+C+
Sbjct: 274 YCK 276
>gi|167998422|ref|XP_001751917.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697015|gb|EDQ83352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1216
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 55/379 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
A+ E + +++ LN+ NS +A + L+ +L + ++N+LL C
Sbjct: 543 AVLESM-DEHLILNMKKVNSYEFYSACKKRRALKEAFKFSRLVRRKSLRNFNMLLSVCAH 601
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A + A + VK L+ D Y+T++ A A + K +M G+
Sbjct: 602 AQDASSACRVLDMVKM----AGLQADCIFYTTLISACAKASRIDLMFKFFNEMEIQGIEA 657
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T+ ++I+ CA AG V +A ++++ML EP+ N L+ AC A F RAF +
Sbjct: 658 NVQTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVL 717
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + P + H
Sbjct: 718 -------------------------------ADMRDAPQPIALDH--------------I 732
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ AC + R + MR+ +S +T + AC G + AL I M
Sbjct: 733 TYGALIAACSRAGEVERALEVYKRMRSSKVSGTTECYTAAVHACSHKGYLNIALSIYDDM 792
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
REDG+ PD V + + V + ++ AF++ +EMK+ +P+ VTY TL+ A S+ +
Sbjct: 793 REDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTKPSPVTYNTLMVACSK---V 849
Query: 635 HEVQQCLAVYQDMWKAGYK 653
+ + + VY+++ G +
Sbjct: 850 DDAENAMRVYEEIKALGLR 868
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
N+ +ID C GD K+ IY+ + +Q V + +FN+L+ F EV
Sbjct: 658 NVQTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVL 717
Query: 313 KNMQKL--GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+M+ + D +Y L+ AC AG A E+Y ++ + G + Y+ V
Sbjct: 718 ADMRDAPQPIALDHITYGALIAACSRAGEVERALEVYKRMRSSKVSGTTE----CYTAAV 773
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +AL + +DM GV P+ + + ++++ +AG ++ A + +EM G +
Sbjct: 774 HACSHKGYLNIALSIYDDMREDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTK 833
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF 456
P+ N L+ AC + + A R++
Sbjct: 834 PSPVTYNTLMVACSKVDDAENAMRVY 859
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKR------FSF-----KPTTTTYNILMKAC 525
D ++ +E D+ I N YS+ KR F F + + +N+L+ C
Sbjct: 540 DCVAVLESMDEHLILNMKKVNSYEFYSACKKRRALKEAFKFSRLVRRKSLRNFNMLLSVC 599
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
D +++ ++ GL + I +T LI AC + ++ + M G+ +V
Sbjct: 600 AHAQDASSACRVLDMVKMAGLQADCIFYTTLISACAKASRIDLMFKFFNEMEIQGIEANV 659
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ I C R+ + +AF ++++M + +++P+ V + TL+ A R G+ + LA
Sbjct: 660 QTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVLAD 719
Query: 644 YQD 646
+D
Sbjct: 720 MRD 722
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+IY+D+R V + F ++M+V H K + + M+ +G +YN L+ AC
Sbjct: 787 SIYDDMREDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTKPSPVTYNTLMVAC 846
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ A +Y E+K L + +L L
Sbjct: 847 SKVDDAENAMRVYEEIKALGLRPILFL 873
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ N+ FN+L+ + F +V M G D+ Y +L C
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVC 306
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ +A EI + + + G LK +V Y+T++K A+ W+ A ++ +M
Sbjct: 307 KEGHLEVAHEI---LDRMPSYG-LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP 362
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ +T++ L++ GLV + + L E+ML+ GC P+ ++ + D A L
Sbjct: 363 LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVML 422
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+S A G +P T
Sbjct: 423 LKSMA------ACG-----------------------------------------CRPNT 435
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+Y I++K C+ V A LM++M G SPN +++ +I+ G VE A+++LK
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G SPD+++Y+T I ++ + +A L M + + PN + Y ++ A S+ G
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 634 LHEVQQCLAVYQDM 647
++ V Q QD+
Sbjct: 556 INRVIQMFDNIQDV 569
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 176/425 (41%), Gaps = 67/425 (15%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y+CR G + + + + T +I ++ ++++ L+ E+
Sbjct: 269 YLCRN--------GLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V F
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP----LDDVTFNILVDFFC 376
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+++ E ML G P+ IT++++IN GL+++A+ L + M GC PN+
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
I+L+ C +R W ++ D +S M +
Sbjct: 437 SYTIVLKG---LCSAER-------WVDAE-------------DLMSQMIEQ--------- 464
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
P T+N ++ C +A L+ +M G SP+ IS++
Sbjct: 465 ---------------GCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYS 509
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID G +G + AL++L +M GMSP+ + Y++ + R+ + +F+ ++
Sbjct: 510 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVI 671
I+ + V Y ++ + + G + LA M +G N++ LI EG +
Sbjct: 570 TIRSDAVLYNAVISSLCKRGGTDRAIEFLAY---MVSSGCMPNESTYTILIRGLASEGFV 626
Query: 672 QDKNQ 676
++ +
Sbjct: 627 KEAQE 631
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 29/354 (8%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + V +++ G D+ + N++L A C G +V E ++ L DV
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV--DEALRLLRDLPTSFGCDPDVV 226
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++K AK W + E+M+ G PN +T+++LI GL E+ + +M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRI 479
+ GC P+ + +L + + A + S+ L V G + +R
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
E + N D T+NIL+ C + YRV L+
Sbjct: 347 EQAEELLAEMFDND---------CPLDD--------VTFNILVDFFCQNGLVYRVIELLE 389
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G P+ I++T +I+ G ++ A+ +LK M G P+ ++YT +K ++
Sbjct: 390 QMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAE 449
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R A L +M PN VT+ T++ + G V+Q + + + M G
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL---VEQAIELLKQMLLNG 500
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 24/286 (8%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ-- 448
S V PN T+ ++ A G + A+ + +EM + GC P +++L+A AC
Sbjct: 108 SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEA---ACSRG 164
Query: 449 ----FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
F A R+ + L AL GN + + N S+ +
Sbjct: 165 GGGGFRSAVRVLQD--LHGRGCALDV---GNCNLVLNAVCDQGGSVDEALRLL-----RD 214
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
F P +YN ++K C + RV+ LM EM VG PN +++ LI +G
Sbjct: 215 LPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNG 274
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E Q+L M + G +PD+ Y T + + L+ A + + M Y ++PN+V Y
Sbjct: 275 LFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYN 334
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
T+L+ + ++ LA +M+ +D L++ +C+
Sbjct: 335 TVLKGLCSAERWEQAEELLA---EMFDNDCPLDDVTFNILVDFFCQ 377
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ + L+ FN L++ + + +
Sbjct: 328 PNVVCYNTVLK--GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVI 385
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M + G + D+ +Y ++ C G L E +K + A G + + +Y+ +
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEG---LIDEAVMLLKSMAACGC-RPNTISYTIV 441
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W A + M+ G +PN +T++++IN GLVEQA+ L ++ML GC
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + D A L T+ + +A +G +R+
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M + + + N+ SS KR TD R + M +
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGG----------------TD--RAIEFLAYMVS 603
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++TILI G V+ A ++L
Sbjct: 604 SGCMPNESTYTILIRGLASEGFVKEAQEML 633
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 143/354 (40%), Gaps = 28/354 (7%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ C AG A+ + V + + +TY +V+ AL V
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP-------VPPNAYTYFPVVRALCARGRIADALSVL 138
Query: 387 EDMLSAGVTPNTITWSSLINACAN---AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA- 442
++M G P + ++ A + G A+ + +++ GC + CN++L A
Sbjct: 139 DEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAV 198
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
C + D A RL R S + + D +S + V +
Sbjct: 199 CDQGGSVDEALRLLRDLPTS---------FGCDPDVVSYNAVLKGLCMAKRWGRVQDLME 249
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
R P T+N L+ C + + RV ++ +M G +P+ + ++D
Sbjct: 250 EMV--RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK 307
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++E A +IL M G+ P+VV Y T +K ++R +QA L EM + VT
Sbjct: 308 EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVT 367
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ L+ + G ++ V + L + M + G + +I +C EG+I +
Sbjct: 368 FNILVDFFCQNGLVYRVIELL---EQMLEHGCVPDVITYTTVINGFCKEGLIDE 418
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 180/458 (39%), Gaps = 62/458 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG------- 270
+ D++ C ++ F R++ A R +KH P+++ +I G C
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMGILEKH-GKPDVFAYNAVIS--GFCKANRIESA 63
Query: 271 ----DYMKSRAIYEDLRSQNVTLNIY-----------VFNSLMNVN-------------- 301
D MK + D+ + N+ + + VF L+ N
Sbjct: 64 KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123
Query: 302 ----AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L++ M G+ D +YN++ + C G A E V+ L ++G
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEF---VRTLNSRG 180
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
K DV TY+ +++ + W K ++ S G PN +T+S LI++ G +E++
Sbjct: 181 C-KPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
++L + M + G P++ C + L+ A + D A DG
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMIC-----------DGFLP 288
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
I N N + D+ P ++YN ++ A + D YR +
Sbjct: 289 DIVNYNTIMAALCKNGNGDHAVEIFGKLDE-VGCPPNVSSYNTMLSALWSSGDRYRALGM 347
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+++M + G+ P+ I++ LI G V+ A+ +L M P++V+Y T + +
Sbjct: 348 ISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCK 407
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ R+ A + M QPN TY L+ GS
Sbjct: 408 AHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGS 445
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 187/456 (41%), Gaps = 71/456 (15%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N+ ++ V ++K G D+ +YN ++ C A A+ + +K KG
Sbjct: 22 NSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKR---KG-FS 76
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMH 419
DV T++ ++ F +ALKV E++L P IT++ LI A G +++A+
Sbjct: 77 PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALK 136
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L +EML G EP++ N++ + + + DRAF R+
Sbjct: 137 LLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL-------------------- 176
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
NS KP TYNIL++A + + M+
Sbjct: 177 -------------------NSR--------GCKPDVITYNILLRALLNQGKWDEGEKWMS 209
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
E+ + G PN ++++ILI + G +E ++ ++K+M+E G++PD Y I R
Sbjct: 210 EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 269
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR----------YGSLHEV--QQCLAVYQ 645
+L A + M P++V Y T++ A + +G L EV ++ Y
Sbjct: 270 KLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329
Query: 646 DMWKAGYKANDTY--LKELIEEWCEGVIQDKNQNQGEVT-LCRRTNSQRPQSLLLEKVAV 702
M A + + D Y L + + +G+ D ++ LCR LL + ++
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSG 389
Query: 703 HLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKEN 738
Q + + L GL K + VL M EN
Sbjct: 390 RFQPNIVSYKTV-LLGLCKAHRIDDAIEVLAAMIEN 424
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 44/377 (11%)
Query: 116 VASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-FKLLKNECQRLL 166
V SG K+ RI+ VL ++ G +P + F G G L + LL
Sbjct: 50 VISGFCKA---NRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106
Query: 167 DSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK---PDV---NLAIRYACIVPRA 220
+ + +L E + +DE +++ +++ PD N+ R C +
Sbjct: 107 KDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166
Query: 221 DILFCNFVREF---GKKRDLVS---ALRA------YDASKKHLSS-------PNMYICRT 261
D F FVR G K D+++ LRA +D +K +S PN+
Sbjct: 167 DRAF-EFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLG 319
+I G +S + + ++ + +T + Y ++ L+ + L +E M G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D+ +YN ++ A C GN A EI+G++ + +V +Y+T++ +
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPP----NVSSYNTMLSALWSSGDR 341
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL + MLS G+ P+ IT++SLI+ G+V++A+ L +ML +PN +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 440 LQACVEACQFDRAFRLF 456
L +A + D A +
Sbjct: 402 LLGLCKAHRIDDAIEVL 418
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I+ L N+ +N++++ ++ D L + M G+ D+ +YN L+ C
Sbjct: 312 IFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + E G + + G + ++ +Y T++ A A++V M+ G
Sbjct: 372 RDG---MVDEAIGLLADM-LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQ 427
Query: 396 PNTITWSSLINACANAGLVEQAMHL 420
PN T++ LI +G QAM L
Sbjct: 428 PNETTYTLLIEGIGFSGSRTQAMEL 452
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 174/425 (40%), Gaps = 41/425 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 209
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 265
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 266 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNM-EHKDKQSITNTP 494
D+A + + K + L + Y NT R + M E K+ I
Sbjct: 326 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
PN +Y L+ C D + L EM G P+ +++
Sbjct: 383 GVRPNH---------------VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++D G++ A + M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 428 VMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
+PNLV Y L+ ++ G E Q +Y +M G +D L+ +
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDGLTPDDALYSALVGS----LHT 540
Query: 673 DKNQN 677
DK QN
Sbjct: 541 DKKQN 545
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 326
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 417
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K NEM GL P
Sbjct: 418 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---NEMEKKGLVP 456
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 517 DNMLGDGLTPDDALYSALV------GSLH 539
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S ++++D SG V A Q+L M G+ + + Y + + R K + + +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M++ I+P + TY L+ S + ++ + AV+++M + + +I +C
Sbjct: 204 MENEGIEPTVGTYTILVDGLS---AARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 259
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 61/437 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
FGK D+V A + + + SP + I G+C G + + DLR +N
Sbjct: 263 FGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH--GLCRAGCVEFALRLIRDLRIRNQP 320
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN Y +N++++ +L E+ ++M+ G+ SY+IL+ C G A ++
Sbjct: 321 LNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDL 380
Query: 347 YGEV--------------------------------KHLEAKGVLKLDVFTYSTIVKVFA 374
E+ +L A+G K DV +Y+T++ F
Sbjct: 381 IEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEG-YKHDVISYNTLINGFV 439
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A K+ +M G PN+ T++ LI+ +++A+ +F ML+ G + N
Sbjct: 440 LQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIF 499
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS----NMEHKDKQSI 490
CNI+ A +F+R + + L LG + T I E K +++
Sbjct: 500 TCNIM------ADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
P + N+ + P YN L+ KAL+ +M VG+ P+
Sbjct: 554 EVLPVMLKNNVF----------PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSI 603
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T+LI+ ++ A + K M + G+ PD + +T I + +K A++L+EE
Sbjct: 604 VTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEE 663
Query: 609 MKHYQIQPNLVTYITLL 625
M + PN+VTY L+
Sbjct: 664 MSQWGKSPNVVTYTCLI 680
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/473 (19%), Positives = 197/473 (41%), Gaps = 39/473 (8%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ F + LV A + +++ N+ C +++ R+++E+L+
Sbjct: 185 IKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGP 244
Query: 288 TLNIYVFNSLMNVNAH-------DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ N++ + +MN D+ EV + M+ G + +Y + C AG
Sbjct: 245 SPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCV 304
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A + ++ L + L+ + Y+ ++ F A ++ EDM S G++P +
Sbjct: 305 EFALRL---IRDLRIRNQ-PLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYS 360
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW- 459
+S LI+ G VE+A+ L EEM+Q+ +P+ + L ++ + + +F +
Sbjct: 361 YSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLG 420
Query: 460 -------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+S + G + + H+ + + + +F N F KR
Sbjct: 421 AEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLD 480
Query: 513 PTTTTYNILMKA-------CCT----------DYYRVKALMNEMRTVGLSPNHISWTILI 555
+ I++K C ++ L+NE++ +G+ PN ++ I+I
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVI 540
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
E A ++L +M ++ + P + Y T I + +A L+ +M I
Sbjct: 541 KWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIP 600
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P++VTY L+ + + + ++Q+ ++++M K G ++ +I +C+
Sbjct: 601 PSIVTYTMLI---NMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCK 650
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 38/346 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IY 279
I + + F +RD+ SA + + + S PN + +I G C +A ++
Sbjct: 429 ISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIH--GFCKRQRLDKALEVF 486
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ V LNI+ N + + + F L++ +Q LG++ + +YNI++K C
Sbjct: 487 TIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKE 546
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFT----YSTIVKVFADAKWWQMALKVKEDMLSAG 393
T A E+ +LK +VF Y+T++ +A AL + ML G
Sbjct: 547 QKTEKAWEV--------LPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG 598
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ +T++ LIN +N +++A +LF+EM++ G P+ ++ + A+
Sbjct: 599 IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAW 658
Query: 454 RLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L+ W S V DG +I M+ D F+ N KR +
Sbjct: 659 ALYEEMSQWGKSPNVVTYTCLIDGYF-KIKRMDKAD---------FLFNKM-----KRDN 703
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
P TY L+ + Y RV+ + NEM+ G+ PN+ ++ L
Sbjct: 704 VTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 41/441 (9%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTL 289
G RDL+ ++ S+ L + N Y I V G C ++K A +L +QN L
Sbjct: 259 LGDARDLLMDMK----SRGLLPNRNTYN----ILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 290 -NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+N N ++ ++ M+ L ++ D+ SYN L+ C L + + E
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC-LEWSKI--SEA 367
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + KGV K + T++ +VK + A M +G +P+ +T+++LIN
Sbjct: 368 FKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
AG + +A +EM + + +S N +L+ + + A++L S
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 460 -TLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNF-----------VPNSHYSSF 505
+S + +G DGN DR + E K+K+ I +T + S
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 506 DKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++ P TTYN ++ C D + N+M P+ + IL+
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E AL++ G + D V Y T I + RL AF+L EM+ ++ P+ TY
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
++ A + G + E ++ ++
Sbjct: 667 NAIITALTDSGRIREAEEFMS 687
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 215/516 (41%), Gaps = 79/516 (15%)
Query: 229 REFGKKRDLVSALRAYDASKKH--------LSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
R+F + L+ A D ++H L+SP+ + T I G + I++
Sbjct: 102 RKFSDAKSLLLGFIATD--RRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFK 159
Query: 281 DLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N+ N+L+N ++H + F+ E + + KLG++ ++ ++NI++ C
Sbjct: 160 KMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYC 219
Query: 336 LAG------------------------NTVL----AQEIYGEVKHL----EAKGVLKLDV 363
L NT+L + G+ + L +++G+L +
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLP-NR 278
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ +V + W + A V E M + P+ T++ LIN N G +E+A L +E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGE 470
M P+ N L+ C+E + AF+L + + K G+
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFDK--RFSFKPTTTTYN 519
D ++ I+ ME T N + N + + + D+ R + K + T N
Sbjct: 399 -MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+++ C + +A L++ R G + +S+ LI GNV+ AL++ M+E
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ P V Y I + + +QA S E+ + P+ TY T+L R G +V
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG---DV 574
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
++ + M + +K + L+ C EGV++
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 160/402 (39%), Gaps = 82/402 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SP+ T+I+ G+ ++ +++ +N+ ++ N+++ + K E Y
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE-EAY 473
Query: 313 K---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K + +K G D SY L+ GN A +++ E+K E + TY+ I
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE----IIPSTVTYNCI 529
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A+ ++L +G+ P+ T++++++ G VE+A +M++
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 430 EPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ CNILL+ C+E ++A +LF +W V+ G+ D
Sbjct: 590 KPDVFTCNILLRGLCMEGV-LEKALKLFNTW------VSKGKAID--------------- 627
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
T TYN L+ + C + A L++EM L P
Sbjct: 628 --------------------------TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGP 661
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPD-----------------------V 583
+H ++ +I A SG + A + + M E G PD
Sbjct: 662 DHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSS 721
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
VAY+ IK + K A +F E K I + TYI L+
Sbjct: 722 VAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 23/287 (8%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+P+ + I A +G A +F++M + PN CN LL + V ++ +
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSH 187
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ S + LG + NT I +E+K K ++ + + ++
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV----------EFLNVMGKY 237
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P TYN ++ C + L+ +M++ GL PN ++ IL+ G ++ A
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++M ++ + PDV Y I R+++AF L +EM++ ++ P++V+Y TL+
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ + E + L ++M + G K N +++ +C EG + D
Sbjct: 358 CLEWSKISEAFKLL---EEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 35/345 (10%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+++ ++ M GV + SY +++ C GN + + G + +G + +D
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGG---MIERGFV-VDNA 238
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S IV+ F + + AL G+ PN I ++ +I G V+QA + EEM
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM 298
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---------RSWTLSKTQVALGEDYDGN 475
+ G +PN L+ + ++AFRLF + L+ T + G D
Sbjct: 299 VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEK 358
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK 533
+R + + K+ P T TY L+ C ++ R
Sbjct: 359 MNRAEMLLSRMKEQ--------------------GLAPNTNTYTTLIDGHCKAGNFERAY 398
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LMN M G SPN ++ ++D G V+ A ++LK +G+ D V YT I
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ +KQA LF +M IQP++ +Y TL+ R + E +
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 134/332 (40%), Gaps = 41/332 (12%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+VK FA+ + A+++ +M + G+ P+T T + ++ GLVE A +LF+EM G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN +++ V C+ R W + G D T + E +K
Sbjct: 198 VQPNCVSYRVMV---VGYCKLGNVLESDR-WL--GGMIERGFVVDNATLSLIVREFCEKG 251
Query: 489 SITNT-------------PNFVPNS-------HYSSFDKRF---------SFKPTTTTYN 519
+T PN + + S + F +KP T+
Sbjct: 252 FVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHT 311
Query: 520 ILMKACCTDYYRVKAL---MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C + KA + +R+ PN +++T +I + A +L M+E
Sbjct: 312 ALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKE 371
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++P+ YTT I ++ ++A+ L M PN+ TY ++ + G
Sbjct: 372 QGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKG---R 428
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
VQ+ V + ++ G A+ LI E C+
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCK 460
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYED-----LRSQNVTLNIYVFNSLMNVNAHDL 305
SPN+ I+D G+C G ++ + + L + VT I + + ++
Sbjct: 410 SPNVCTYNAIVD--GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE---HCKQAEI 464
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++ M K G+ D+ SY L+ C ++ + E G++ + T
Sbjct: 465 KQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF---GLVPTNK-T 520
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ + ++ALK M G ++IT+ +LI+ +++A L++ M+
Sbjct: 521 YTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMI 580
Query: 426 QAGCEP 431
+ G P
Sbjct: 581 EKGLTP 586
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 180/411 (43%), Gaps = 47/411 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M + + NI++ + C
Sbjct: 269 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSIC 328
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + ++ + G D +Y+T++K A+ W A ++ ++M+
Sbjct: 329 KQGRV---DDAFKFLNNMGSYGC-NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCP 384
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA+ L E+M + GC N L+ CV+ D A
Sbjct: 385 PNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG-HIDSALE 443
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LFRS T++ T + G E D + ++ M H+D
Sbjct: 444 LFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD------------------- 484
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C + +A L+ +M G +PN I++ L D +
Sbjct: 485 -----CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCS 539
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + G+SPDV+ +++ I + + R+++A +F + ++P + Y
Sbjct: 540 SEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNK 599
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+L + HE+ + M G N++ LIE EG++++
Sbjct: 600 ILLGLCKR---HEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKE 647
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 160/372 (43%), Gaps = 50/372 (13%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + + G D+ +YN L+ C G+ A+ + G + + D +TY+ ++
Sbjct: 97 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-------VAPDAYTYTPLI 149
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+V D AL + +DML G PN +T++ L+ A C N+G EQAM + +EM GC
Sbjct: 150 RVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF-EQAMAVLDEMRAKGC 208
Query: 430 EPNSQCCNILLQACVEACQFDRAF----RLF----RSWTLSKTQVALG----EDYDGNTD 477
PN N+++ + D A RLF + T+S T + G + +D +
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEE 268
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ M K N +PN T+++L++ C R +
Sbjct: 269 LFAEMMEK---------NCMPNE---------------VTFDMLIRFFCRGGMVERAIQV 304
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M + N I+I++ G V+ A + L M G +PD ++YTT +K R
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++R A L +EM PN VT+ T + + G ++Q + + + M + G
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL---IEQAIMLIEQMQEHGCTVG 421
Query: 656 DTYLKELIEEWC 667
L+ +C
Sbjct: 422 VVTYNALVNGFC 433
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 203/510 (39%), Gaps = 96/510 (18%)
Query: 196 RIVQLCVNK----PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
R+V+L ++ PDV L + L N R G+ D LRA + S
Sbjct: 60 RLVELSASRDGEAPDVYLCTK----------LIRNLCRR-GRTSDAARVLRAAEGSG--- 105
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S +++ T+ V G C Y A + S V + Y + L+ V + + L
Sbjct: 106 SPVDVFAYNTL--VAGYC-RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADAL 162
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV----------- 358
+ +M + G ++ +Y +LL+A C A + E++ AKG
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR---AKGCTPNIVTYNVII 219
Query: 359 -----------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ D +Y+T++K +K W ++ +M+
Sbjct: 220 NGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 279
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+ LI G+VE+A+ + ++M + C N+ CNI++ + + + D AF+
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKF 339
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ T+S T V G +R ++ + K+ + N
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGL---CRAERWNDAKELLKEMVRN--------------- 381
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ P T+N + C +A+M +M+ G + +++ L++ G+++
Sbjct: 382 --NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ + M P+ + YTT + ++RL A L EM H PN+VT+ L+
Sbjct: 440 SALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ G L E + + + M + G N
Sbjct: 497 NFFCQKGFLDEA---IELVEQMMEHGCTPN 523
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 508 RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R +P TY +L++A C + + + A+++EMR G +PN +++ ++I+ G V+
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +L + G PD V+YTT +K SKR LF EM PN VT+ L+
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R R G V++ + V Q M + N T +I C +G + D
Sbjct: 290 RFFCRGGM---VERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDD 335
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY L++ C D RV +L+++M G PN +++T+L++A + E A+
Sbjct: 140 PDAYTYTPLIRVLC-DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMA 198
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L MR G +P++V Y I R R+ A L + Y QP+ V+Y TLL+
Sbjct: 199 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLC 258
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+V++ ++ +M + N+ LI +C G
Sbjct: 259 ASKRWDDVEE---LFAEMMEKNCMPNEVTFDMLIRFFCRG 295
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 197/480 (41%), Gaps = 68/480 (14%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC-QRLLDSGEVEMFVGLMEVLEE 183
REGR+D +L +L G P + S LLK C + D E E+F E++E+
Sbjct: 224 REGRVDDARDLLNRLFSYGCQPDTV---SYTTLLKGLCASKRWDDVE-ELFA---EMMEK 276
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCN 226
+P N+ ++ IR+ C +V RA + CN
Sbjct: 277 NCMP---------------NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCN 321
Query: 227 FV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
V K+ + A + + + +P+ T++ G+C + ++ + +++
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK--GLCRAERWNDAKELLKEMV 379
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
N N FN+ + + ++ + + + MQ+ G + +YN L+ C+ G+
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E++ + K + TY+T++ +A+ A ++ +ML PN +T+
Sbjct: 440 SALELFRSMP-------CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L+N G +++A+ L E+M++ GC PN N L + C + A L +
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGL-V 551
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
SK + D + I + +D+ + H + + +P YN +
Sbjct: 552 SK---GVSPDVITFSSIIGILSKEDR-----VEEAIQMFHLA---QDIGMRPKALVYNKI 600
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + A+ + M + G PN ++ ILI+ G ++ A +L ++ G+
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 138/320 (43%), Gaps = 55/320 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M G D+ +YN+L+ C G A + + ++ +V T++
Sbjct: 36 MKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQP----NVITHNI 91
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ +M+ G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 92 ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + + DRA +
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEI------------------------------ 181
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
V Y P TYN ++ A C D +V A L+N++ + G S
Sbjct: 182 -------MVSRGCY----------PDIVTYNTMLTALCKDG-KVDAAVELLNQLSSKGCS 223
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P I++ +ID G + A+++L MR G+ PDV+ Y++ I R ++++A
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283
Query: 606 FEEMKHYQIQPNLVTYITLL 625
F +++ + ++PN TY +++
Sbjct: 284 FHDVEGFGVKPNAFTYNSIM 303
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 135/335 (40%), Gaps = 56/335 (16%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL++A C A ++ E + ++G K DV TY+ +V A
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDE---MGSRGC-KPDVVTYNVLVNGMCKEGRLDEA 70
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K M S G PN IT + ++ + + G A L EM++ GC P+ NIL+
Sbjct: 71 IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
RA + T PNS
Sbjct: 131 LCRKGLLGRAIDILEKMP--------------------------------THGCTPNS-- 156
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
+YN L+ C + +A+ + M + G P+ +++ ++ A
Sbjct: 157 -------------LSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCK 203
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A+++L + G SP ++ Y T I + + QA L EM+ ++P+++T
Sbjct: 204 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVIT 263
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
Y +L+ SR G +V++ + + D+ G K N
Sbjct: 264 YSSLIAGLSREG---KVEEAIKFFHDVEGFGVKPN 295
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 396 PNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ IT++ LI A CA +G V QAM L +EM GC+P+ N+L+ + + D A +
Sbjct: 14 PDVITYTILIEATCAESG-VGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
S Y + I++ + +S+ +T ++ + R P+
Sbjct: 73 FLNSMP----------SYGSQPNVITH--NIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+NIL+ C +A+ + +M T G +PN +S+ L+ ++ A+Q L+
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
IM G PD+V Y T + + ++ A L ++ P L+TY T++ S+ G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ Q + + +M G K + LI
Sbjct: 241 ---KTDQAVELLHEMRGKGLKPDVITYSSLI 268
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 32/285 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ + C R D I F N + +G + R + S R DA K
Sbjct: 48 KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEK 107
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + + T N +N L++
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINF--LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K ++ + M G D+ +YN +L A C G A E+ + L +KG
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVEL---LNQLSSKGC 222
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+++ +M G+ P+ IT+SSLI + G VE+A+
Sbjct: 223 SPV-LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
F ++ G +PN+ N ++ +A Q DRA F ++ +SK
Sbjct: 282 KFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAID-FLAYMISK 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 145/350 (41%), Gaps = 40/350 (11%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M SR D+ + NV +N ++ +KF +M G ++ ++NI+
Sbjct: 40 DEMGSRGCKPDVVTYNVLVNGMCKEGRLD---EAIKF----LNSMPSYGSQPNVITHNII 92
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L++ C G + A+++ E+ KG V T++ ++ A+ + E M
Sbjct: 93 LRSMCSTGRWMDAEKLLTEMVR---KGC-SPSVVTFNILINFLCRKGLLGRAIDILEKMP 148
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G TPN+++++ L++ +++A+ E M+ GC P+ N +L A + + D
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208
Query: 451 RAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
A L + ++ V G G TD+ + H+ + +S
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268
Query: 503 SSFDKR---------------FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
+ + F KP TYN +M C +A+ + M + G
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCK 328
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
P +S+TILI+ G + AL++L + G VV ++A +V VR
Sbjct: 329 PTEVSYTILIEGIANEGLAKEALELLNELCSRG----VVKKSSAEQVVVR 374
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI E + S+ +I +N+
Sbjct: 139 RAIDILEKMPTHGCTPNSLSYNPLLH--GFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ D K +E+ + G + +YN ++ G T A E+ E++
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR--- 253
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK DV TYS+++ + + A+K D+ GV PN T++S++ A
Sbjct: 254 GKG-LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ GC+P IL++
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEG 340
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 174/410 (42%), Gaps = 28/410 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 49 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 108
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 109 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 163
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 164 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 223
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
N L++ + + ++F+ K + L Y + +E K +
Sbjct: 224 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE-KGR 282
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ + + F P +Y+IL+ + + M+ G +
Sbjct: 283 MIFEDI-------------RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++D SG V A +IL+ M+E + P V Y + + RL +A+ L
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
FEE K I+ N+V Y +L+ +G + + + + ++M K G N
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDG---FGKVGRIDEAYLILEEMMKKGLTPN 436
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 171/433 (39%), Gaps = 65/433 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ +C+ + GKK + A R ++ H ++P +Y ++I I G I+
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT--SLIRNFFIHGRKEDGHKIF 250
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L + ++ + N+ M+ A +++ ++++++ G + D+ SY+IL+ A
Sbjct: 251 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 310
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I+ H + LD Y+ +V F + A ++ E+M V P
Sbjct: 311 GQARETSNIF----HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+ ++++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI-- 424
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+E K+ +T P T
Sbjct: 425 ------------------------LEEMMKKGLT---------------------PNVYT 439
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+ A +AL+ M+ + PN +++ILI+ A + M+
Sbjct: 440 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV YTT I + + A+SLFE K P+ ++ L+ S
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN----- 554
Query: 636 EVQQCLAVYQDMW 648
+ + YQ W
Sbjct: 555 -ANRAMEAYQAGW 566
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 161/386 (41%), Gaps = 32/386 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +L++Q + + + S++ V A L E++ M+ + +YN ++
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG ++ Y ++ L +G + V ++++I+ + AL + E ++
Sbjct: 65 SAGRF---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAE 119
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN+ T++ +I+ G VE+A + +EM A PN NI++ +A + + A+++
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Query: 456 FRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-- 505
F S + ++ + G G D + K + N V S +F
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239
Query: 506 -----DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHIS 550
D F KP T N M + + + + ++R+ G P+ S
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ILI +G I M++ G + D AY + +S ++ +A+ + EEMK
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+QP + TY ++ ++ L E
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDE 385
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 118/286 (41%), Gaps = 49/286 (17%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA K ++ + G+ P+ ++++S+I AG + +A LF +M P + N ++
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
A +F+ A++L +R+ +++ I + +F NS
Sbjct: 61 MGYGSAGRFEDAYKLL--------------------ERL-----RERGCIPSVVSF--NS 93
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+ K+ + + ++ K PN ++ I+ID
Sbjct: 94 ILTCLGKKRKVDEALSLFEVMKKDA-------------------EPNSSTYNIIIDMLCL 134
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G VE A +IL M + P+++ + ++++L++A+ +FE P+ VT
Sbjct: 135 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 194
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
Y +L+ + G + E + +++ M AG+ AN LI +
Sbjct: 195 YCSLIDGLGKKGQVDEAYR---LFEKMLDAGHNANPVVYTSLIRNF 237
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V F K + A + K+ P + I+D ++ ++E+ +S+ +
Sbjct: 339 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 398
Query: 288 TLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
LN+ +++SL++ V D + + + M K G+ ++ ++N LL A V A
Sbjct: 399 ELNVVLYSSLIDGFGKVGRIDEAYL--ILEEMMKKGLTPNVYTWNSLLDA------LVKA 450
Query: 344 QEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+EI + ++ +K + +TYS ++ + + A +DM G+ PN +T+
Sbjct: 451 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 510
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+++I+ A G + A LFE G P++ N L++ A +RA +++ L
Sbjct: 511 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA---NRAMEAYQAGWL 567
Query: 462 SKT 464
T
Sbjct: 568 DTT 570
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 219/534 (41%), Gaps = 64/534 (11%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNM 315
+ R ++ G G ++ + ++RS + L + N ++ V F +V+ M
Sbjct: 113 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 172
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ GV D S+ L+ CC G +E+ + + G LD T + +V+ +
Sbjct: 173 TRAGVCPDERSFRALVVVCCREGKV---EEVDALLAAMWRYG-FSLDNATCTVVVRSLCE 228
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
++ + ML G PN + +++ I+ V+QA H+ EEM+ G +PN
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSK---------TQVALGEDYDGNTDR----ISNM 482
L+ + +RAFRLF S T + G +G R + M
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348
Query: 483 EHKDKQSITNTPNFVPNSH--YSSFDKRF---------SFKPTTTTYNILMKACCT---- 527
+ + TNT + H SFD+ F F P TYN ++ C
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ Y+V + GL + I++TILI G++ AL + M E+G PD+ AY
Sbjct: 409 QEAYKVLRMATSQ---GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAY 465
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T+ I + ++++++ F++ + P TY +++ + Y + L V++
Sbjct: 466 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMI---AGYCKVGRSTLALRVFER 522
Query: 647 MWKAGYKANDTYLKELIEEWC------------EGVIQDKNQNQGEVT-------LCRRT 687
M + G A+ LI C EG++ DK EVT CRR
Sbjct: 523 MVQNGCFADSITYGALISGLCKESRLEEAKALYEGML-DKRLVPCEVTRVTLTFEYCRRE 581
Query: 688 NSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSL 741
+ S +L+++ Q + + L L V+A + L +++ E+Y++
Sbjct: 582 KTSIAVS-VLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLK--KVLDEDYAV 632
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 183/428 (42%), Gaps = 51/428 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K+ DL A +A+ ++ + SP++Y T+I G+C G K+ + +D+++ + +
Sbjct: 170 KRVDL--AEKAFRSALRRRVSPDIYTFNTVIS--GLCRIGQLRKAGDVAKDIKAWGLAPS 225
Query: 291 IYVFNSLMN-----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+ +NSL++ A ++ + K M + G+ ++ +L+ C NT A
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E+K +G+ V TY++++ + +K+ E+M G++PN IT+ ++
Sbjct: 286 VFEEMKQ---QGI-AASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G++ A + M + EP+ NIL+ ++R +
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILID-------------VYRRLGKMEDA 388
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPT 514
+A+ E M K T N + S D K +
Sbjct: 389 MAVKE----------AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 515 TTTYNILMKA-CCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN+L+ A CC R L++EM VGL PNH+++ +I GN++ A +I
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + +VV Y IK + ++ +A L EM + PN +TY T+ G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Query: 633 SLHEVQQC 640
+++ C
Sbjct: 559 YTPDIRGC 566
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 161/384 (41%), Gaps = 44/384 (11%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + + +++ + V D+ ++N ++ C G A ++ K ++A G L
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV---AKDIKAWG-L 222
Query: 360 KLDVFTYSTIVKVF----ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLV 414
V TY++++ + + + + +KE M+ AG++P +T+ LIN C N+
Sbjct: 223 APSVATYNSLIDGYCKKGGAGNMYHVDMLLKE-MVEAGISPTAVTFGVLINGYCKNSN-T 280
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGED 471
A+ +FEEM Q G + N L+ + + +L LS ++ G
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G K + + +++ +R + +P YNIL+ D YR
Sbjct: 341 LKGFC---------KKGMMADANDWI-----DGMTER-NVEPDVVIYNILI-----DVYR 380
Query: 532 -------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
A+ M G+SPN ++ LI SG+ A +L M+E G+ DVV
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV 440
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y I +++A L +EM ++PN +TY T+++ G++ + +
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE---IR 497
Query: 645 QDMWKAGYKANDTYLKELIEEWCE 668
M K +AN I+ +C+
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQ 521
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 142/366 (38%), Gaps = 91/366 (24%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-- 419
D++T++T++ + A V +D+ + G+ P+ T++SLI+ G H
Sbjct: 190 DIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 420 -LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L +EM++AG P + +L+ + A R+F
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF---------------------- 287
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
E +Q I + TYN L+ C++ + LM
Sbjct: 288 ----EEMKQQGIA---------------------ASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 537 NEMRTVGLSPNHIS-----------------------------------WTILIDACGGS 561
EM +GLSPN I+ + ILID
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A+ + + M + G+SP+V Y I RS + A L +EMK I+ ++VTY
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGE 680
L+ A G EV++ + + +M + G + N +I+ +C+ G I+ + +
Sbjct: 443 NVLIGALCCKG---EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 681 VTLCRR 686
+ CR+
Sbjct: 500 MEKCRK 505
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 142/333 (42%), Gaps = 63/333 (18%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
AS+++ + SG+ EG+++ V +++++ +LG++P E+ G +LK C++ +
Sbjct: 297 ASVVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGC---VLKGFCKKGMM 350
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+ + G+ E R V+ PDV + Y ++ +
Sbjct: 351 ADANDWIDGMTE----------------RNVE-----PDV---VIYNILI--------DV 378
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R GK D A+ +A K SPN+ +I GD+ + + ++++ + +
Sbjct: 379 YRRLGKMED---AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +N L+ +++ +++ M ++G+ + +YN +++ C GN A E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I ++ + +V TY+ +K F A + +ML + PN IT+ +
Sbjct: 496 IRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET-- 549
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ E M++ G P+ + C +
Sbjct: 550 --------------IKEGMMEKGYTPDIRGCTV 568
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ S L+ G+ V+ A + + +SPD+ + T I R +L++A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+++K + + P++ TY +L+ + G + + ++M +AG LI
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 666 WCE 668
+C+
Sbjct: 274 YCK 276
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 173/398 (43%), Gaps = 38/398 (9%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
Y + R T + +F SL+ + T +V+ +M+ G+ A + Y ++ C
Sbjct: 695 YSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCK 754
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A + + E+ G+L ++ Y +++ + K WQ A V ++ +T
Sbjct: 755 MGFPETAHHL---IDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITV 811
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ W++LI A A +G E+A +F M++ G P N LLQA + + D + +
Sbjct: 812 DRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVV 871
Query: 457 R-----SWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ + +SK+ + L D GN + + H K +
Sbjct: 872 QELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA------------------- 912
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ PT Y ++ + V+A+++EM G P+ W ++ +
Sbjct: 913 -GYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRK 971
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+Q+ + ++EDG+ PD Y T I + R R ++ FSL EM+ ++P L TY +L+
Sbjct: 972 TIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLV- 1030
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +G V+Q +++++ G K + ++ +++
Sbjct: 1031 --ASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMK 1066
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 192/432 (44%), Gaps = 30/432 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
C V+ G++ AL Y+ + +H SPN + TI+ V G ++ A+ +
Sbjct: 188 LCFVVKSVGQE-SWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQ--EALAVEVFM 244
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ N + V+N++M V A +F E+ M++ G D+ S+N L+ A AG
Sbjct: 245 RAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGA 304
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ LA E+ EV+ + L+ D TY+T++ + A + A KV +DM + P+
Sbjct: 305 MMPNLAIELLNEVR----RSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPD 360
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ GL +A LF ++ G P++ N LL A ++ ++
Sbjct: 361 LWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWE 420
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ G+D + + + +M K Q N + Y P T
Sbjct: 421 EMV----KIGFGKD-EMTYNTMIHMYGKQGQ------NELALQLYRDMQSS-GRNPDAVT 468
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y +L+ + +M+EM G+ P +++ LI +G A + M
Sbjct: 469 YTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCML 528
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PD +AY+ + + +R K+A +L++EM H I + Y +LR + +
Sbjct: 529 RSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVE 588
Query: 636 EVQQCLAVYQDM 647
++ + V +DM
Sbjct: 589 DIGR---VIRDM 597
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 29/279 (10%)
Query: 204 KPD-------VNLAIRYACIVPRADILFCNFVREFGKKRDLVS----------------A 240
KPD +N ++ ++P I N VR G + D ++ A
Sbjct: 286 KPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEA 345
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ +D + H P+++ +I V G CG K+ ++ DL S+ + +NSL+
Sbjct: 346 AKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYA 405
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
A + ++ E+++ M K+G D +YN ++ G LA ++Y + +++ G
Sbjct: 406 FAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLY---RDMQSSG- 461
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
D TY+ ++ A V +ML+ GV P T+S+LI A AG +A
Sbjct: 462 RNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAE 521
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
F+ ML++G P+ +++L + + RA L++
Sbjct: 522 ETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYK 560
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 54/295 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG--LVEQAMHL 420
V Y+ ++ V+A + ++ + M G P+ +++++LINA AG + A+ L
Sbjct: 254 VQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIEL 313
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E+ ++G P++ N L+ AC A + A ++F
Sbjct: 314 LNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVF-----------------------D 350
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNE 538
+ME +H+ +P TYN ++ C + + L N+
Sbjct: 351 DME----------------AHHC--------QPDLWTYNAMISVYGRCGLSGKAEQLFND 386
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G P+ +S+ L+ A GNVE +I + M + G D + Y T I + + +
Sbjct: 387 LESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQ 446
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ A L+ +M+ P+ VTY L+ + G +++ + V +M G K
Sbjct: 447 NELALQLYRDMQSSGRNPDAVTYTVLIDS---LGKTNKIAEAAGVMSEMLNTGVK 498
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 26/182 (14%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA----------LMNEMRTVGLSPNHISWTILIDACGGS 561
KP ++N L+ A R+KA L+NE+R GL P+ I++ LI AC +
Sbjct: 286 KPDLVSFNTLINA------RLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRA 339
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
N+E A ++ M PD+ Y I V R +A LF +++ P+ V+Y
Sbjct: 340 SNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY 399
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
+LL A +R G++ +V++ ++++M K G+ ++ +I + + Q Q E+
Sbjct: 400 NSLLYAFAREGNVEKVKE---IWEEMVKIGFGKDEMTYNTMIHMYGK-------QGQNEL 449
Query: 682 TL 683
L
Sbjct: 450 AL 451
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 160/401 (39%), Gaps = 58/401 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N+ + +I+ G + K+ ++ +LR + +T++ V+N+L+ A + ++
Sbjct: 777 NISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIF 836
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G + + N LL+A + G E+Y V+ L+ G K+ + ++
Sbjct: 837 NTMMRDGPSPTVDTINGLLQALIVDGRL---DELYVVVQELQDMG-FKISKSSILLMLDA 892
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FA A K+ M +AG P + + + V + EM +AG +P+
Sbjct: 893 FARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N +L+ V F + ++++ RI
Sbjct: 953 LSIWNSVLKMYVAIEDFRKTIQVYQ--------------------RI------------- 979
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHIS 550
K +P TYN L+ C D+ + +LM+EMR GL P +
Sbjct: 980 --------------KEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDT 1025
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L+ + G VE A ++ + ++ G D Y T +K+ S +A LF MK
Sbjct: 1026 YKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMK 1085
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P + T L+ + YGS + Q+ V ++ + G
Sbjct: 1086 DAGVEPTIATMHLLMVS---YGSSGQPQEAEKVLSNLKETG 1123
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 145/353 (41%), Gaps = 55/353 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG 319
++D G+ + + IY +++ T+++Y + + ++ + M++ G
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAG 948
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N +LK + ++Y +K + L+ D TY+T++ ++
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIK----EDGLEPDEDTYNTLIVMYCRDHRP 1004
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M AG+ P T+ SL+ + LVEQA LFEE+ GC+ + + +
Sbjct: 1005 EEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTM 1064
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ + +A RLF
Sbjct: 1065 MKIYRNSGSHSKAERLF------------------------------------------- 1081
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
S K +PT T ++LM + + +A +++ ++ G + + + ++ +IDA
Sbjct: 1082 ----SMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDA 1137
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ +Q L M+++G+ PD +T I+ S+R +A L ++
Sbjct: 1138 YLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQ 1190
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 139/351 (39%), Gaps = 53/351 (15%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F + ++ + Y K P M++ R + + A+ ++ +
Sbjct: 893 FARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952
Query: 291 IYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++NS+ M V D + T++VY+ +++ G+ D +YN L+ C +E +
Sbjct: 953 LSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHR---PEEGFS 1009
Query: 349 EVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G+ KLD TY ++V F + + A ++ E++ S G + + +++
Sbjct: 1010 LMHEMRVAGLEPKLD--TYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
N+G +A LF M AG EP ++L+ + + Q A ++
Sbjct: 1068 YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKV------------ 1115
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+SN++ T + V +++ + D YNI ++
Sbjct: 1116 -----------LSNLKETGSNLSTLPYSSVIDAYLRNGD-----------YNIGIQKLI- 1152
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+M+ GL P+H WT I A S A+ +L +++ G
Sbjct: 1153 ----------QMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAG 1193
>gi|168052832|ref|XP_001778843.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669712|gb|EDQ56293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 953
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+NIL+ CC G + E V++LE L F+++ ++ F A +
Sbjct: 465 FNILIDFCCKQGKISQGLDFLDEMQVRNLE------LSSFSFNPFIREFGRWTMIDEAFE 518
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+K ML GV P +T++SLI+AC G +E+A LF EM + G E N+ C N L+Q
Sbjct: 519 MKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFA 578
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+FDRA + RS +
Sbjct: 579 MQGRFDRALAVMRSMDAA------------------------------------------ 596
Query: 505 FDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP TY +L+ AC D + L EM+ + P+ +T++I G
Sbjct: 597 -----GVKPDVNTYRLLIFACSLSKDQDKADQLFAEMQEREIRPDESIYTVMIIVYSKCG 651
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ +++++ + + G + + A + + + RL++A +L+ K ++ P+
Sbjct: 652 NVDRGIEMIRSLEKSGETAGIEAKSAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVG 711
Query: 623 TLLRARSRYGSLHEV 637
TLL A + G L ++
Sbjct: 712 TLLAALGKVGDLDKM 726
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 180/438 (41%), Gaps = 35/438 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F F+REFG+ + A A + P + ++I C GD ++ +++ +++
Sbjct: 500 FNPFIREFGRWTMIDEAFEMKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMK 559
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + +N L+ A +F L V ++M GV D+ +Y +L+ AC L+ +
Sbjct: 560 ELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGVKPDVNTYRLLIFACSLSKDQD 619
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E++ E ++ D Y+ ++ V++ +++ + +G T
Sbjct: 620 KADQLFAEMQERE----IRPDESIYTVMIIVYSKCGNVDRGIEMIRSLEKSGETAGIEAK 675
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S++++ A G +E+A+ L+ + P+S LL A + D+ F LF
Sbjct: 676 SAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVGTLLAALGKVGDLDKMFELFED--- 732
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
A G DG ++ + + +I + + ++ + SF I
Sbjct: 733 -----ARG---DGKWPFMNLRQRAEHLNIRCINSVLACIRHNQLGRAISFLRKVKEEGIA 784
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ D + + T G N + W +V ++ MRE G+ P
Sbjct: 785 DEGVLFD-----KIFLHISTGGQDENEMRWL----------DVNDGFLVINAMRELGLRP 829
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ + C +QA + +EM+ +Q N+ + I + RA Y + + ++ L
Sbjct: 830 SRMSLEALLDGCAALNDSQQAHRVLQEMEREGLQLNIFSMIRVFRA---YVAGEDEEKAL 886
Query: 642 AVYQDMWKAGYKANDTYL 659
+ M + K +D L
Sbjct: 887 DLLNQMPEEDLKDSDVRL 904
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+NIL+ CC + L ++EM+ L + S+ I G ++ A ++ M
Sbjct: 465 FNILIDFCCKQGKISQGLDFLDEMQVRNLELSSFSFNPFIREFGRWTMIDEAFEMKAAML 524
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P VV Y + I CV+ L++A SLF EMK ++ N Y L++ + G
Sbjct: 525 RLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRF- 583
Query: 636 EVQQCLAVYQDMWKAGYKAN-DTY 658
+ LAV + M AG K + +TY
Sbjct: 584 --DRALAVMRSMDAAGVKPDVNTY 605
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 154/692 (22%), Positives = 285/692 (41%), Gaps = 77/692 (11%)
Query: 12 SSAIVATQTRLYNHRNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRN 71
++A A RL+ H + P P S+S L+ + H + ALL + R + S
Sbjct: 17 NAASPAVALRLFLHLSSAACPP-----PPRSTSFLARLVAEHPAADALLPLLHRHILSFP 71
Query: 72 DYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASG--------IVKS 123
D + + L+ V+ + F S+ +L I+ +
Sbjct: 72 DPSPHLLALLS-----------CSDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAA 120
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
+RE R+D V + K L G P D LL Q L D+G +E+ + + +
Sbjct: 121 LRESRLDLVEALYKDLLLSGAQP----DVFTRNLL---LQALCDAGRMELAQRVFDAM-- 171
Query: 184 FRLPVKELDEEFRIVQ--LCVNKPDVNLAIRYACIVPRADILFCN-FVREFGKKRDLVSA 240
P + + F I+ C ++ A++ +P +++ CN V F K+ + A
Sbjct: 172 ---PARN-EFSFGILARGYCRAGRSID-ALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEA 226
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL---------RSQNVTLNI 291
R + + +PN+ I G + + I++D+ R VT ++
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ + + +++ M+ G + + SYN L G AQE+ E+
Sbjct: 287 MLSGFCDAGFVDEARVLVDI---MRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMA 343
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H +G+ + + +TY+ IV A +V+ + S ++P+ +T++SL++A +
Sbjct: 344 H---EGI-QPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQV 466
G + A + +EM Q GC PNS N+LLQ+ A + A RL + ++L
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459
Query: 467 ALGED-------YDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTY 518
+ D D D + M + ++ N F+ SS +R P TY
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQR--CLPDQITY 517
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+IL+ A C + + K + EM +SP+ + + I G A+++L+ M +
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P Y I+ + ++ L EMK I PN++TY +L+++ + G
Sbjct: 578 KGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGM--- 634
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
V + + + +M + N T LI+ +C+
Sbjct: 635 VNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D Y+ + C G T LA ++ ++ +E KG TY+ +++ F +
Sbjct: 545 ISPDSVIYDTFIHGYCKHGKTSLAIKV---LRDMEKKGC-NPSTRTYNLLIRGFEEKHKS 600
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ +K+ +M G++PN +T++SLI + G+V +AM L +EMLQ PN ++L
Sbjct: 601 EEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLL 660
Query: 440 LQACVEACQFDRAFRLF 456
++A + F A +F
Sbjct: 661 IKAYCKITDFPSAQMVF 677
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 197/496 (39%), Gaps = 41/496 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK-FTLEVYKNMQKLGVMA-DMASY 327
G +++ + ++ + + N Y +N +++ + K F +N + GVM+ D+ +Y
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LL A C GN A I E+ KG + FTY+ +++ A A ++ E
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQ---KGCAP-NSFTYNVLLQSLWRAGRTTEAERLLE 445
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G + +T + +I+ ++ AM + + M + G + N L ++
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
R ++++ + + +D ++ M KD + + + +
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565
Query: 508 RFSFK-----------PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+ K P+T TYN+L++ + + LM+EM+ G+SPN +++ L
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I + G V A+ +L M ++ + P++ ++ IK + A +F+
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCG 685
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
Q V Y + + YG E + L + +M K++I CE
Sbjct: 686 QKE-VLYCLMCTELTTYGKWIEAKNILEMALEMR---VSIQSFPYKQIISGLCE------ 735
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRG--LTKVEARIIVLAVL 732
GEV ++ LL+ K HL AA ID G K + ++ ++
Sbjct: 736 ---VGEV-----DHAHSLLKLLIAK--RHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMM 785
Query: 733 RMMKENYSLGTDEFHI 748
M N LGTD I
Sbjct: 786 EMADRNDGLGTDSGKI 801
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 158/719 (21%), Positives = 283/719 (39%), Gaps = 132/719 (18%)
Query: 50 PTVHSSQTALLSTVRRDLS-SRNDYYADMASKLAKDGRLEEFAMIVE-----------SV 97
P+ S T +LS + LS S N +++ DG + F ++ +
Sbjct: 8 PSSRPSGTQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKL 67
Query: 98 VVSEGNVSKFASMLSL--EMVASGIVKSIRE-----------GRIDCVVGVLKKLNELGV 144
+ S + +++LSL +M + GI +I R+ VL K+ +LG
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 145 APLELFDGSGFK-LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVN 203
P D + F L++ C VE +G E L K + E FR
Sbjct: 128 QP----DTATFTTLIRGIC--------VEGKIG-----EALHLFDKMIGEGFR------- 163
Query: 204 KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
PDV + + + K + +A+R + + PN++ TII
Sbjct: 164 -PDV--------------VTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 264 DVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
D +C D + A ++ ++ ++ ++ +I+ +NSL++ N + K + M
Sbjct: 209 D--SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+M D+ S+N ++ A C G A ++ V + +GV + +V TY+ ++
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDV---VDKMIQRGV-EPNVVTYTALMDGHCLLSEM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-------------------L 420
A+KV + M+ G PN I++++LIN +++A+H +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F+ M+ GC PN N L+ + + D+A LF + L D + I
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE----LIPDTVTYSTLIH 438
Query: 481 NMEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ H ++ +I V S P TY IL+ C + Y +A L+
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQI----------PNLVTYRILLDYLCKNRYLAEAMALL 488
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ L P+ I ID +G +E A + + G+ PDV Y+ I R
Sbjct: 489 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 548
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN- 655
L +A LF EM N Y T+ R R +E + + + Q+M G+ A+
Sbjct: 549 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN---NETSRAIQLLQEMVARGFSADA 605
Query: 656 ---------------DTYLKELIEEWCEGVIQ-DKNQNQGEVTLCRRTNSQRPQSLLLE 698
D LK+++ C+ + D + + G L + + +R +S L++
Sbjct: 606 STMTLFVKMLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISHERNESDLVQ 664
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 216/514 (42%), Gaps = 85/514 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ K+ SP + I+DV G G + K + +++RS+ + + + ++++
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A + L+ E + ++ G +YN LL+ AG A + E++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D TY+ +V + A + + A V E M GV PN IT++++I+A AG ++
Sbjct: 349 A----DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RSWTLSKT 464
A+ LF M +AGC PN+ N +L + + + ++ +W T
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN---T 461
Query: 465 QVALGEDYDGNT--DRISNMEHKDKQSITNTPNF-VPNSHYSSFDK-------------- 507
+AL GN D+ N ++ +S P+ N+ S++ +
Sbjct: 462 MLALC----GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 508 -RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN- 563
R F TTYN L+ A D+ + ++++M++ G P S+++++ GN
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 564 ----------------------------------VEGALQILKIMREDGMSPDVVAYTTA 589
+ G+ + + ++ G PD+V + +
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + R+ QA + E ++ + P+LVTY +L+ R G + ++ L + K
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE---K 694
Query: 650 AGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVT 682
+ K + +I+ +C G++Q+ + E+T
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 201/510 (39%), Gaps = 108/510 (21%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E G ++ + KGV+ + TY+T++ +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAG---FSKEAAGVIEMMTKKGVMP-NAITYTTVIDAYG 397
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G +PN
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 400 TWSSLINACANAGLVE-----------------------------------QAMHLFEEM 424
TW++++ C N G+ + A ++ EM
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 425 LQAGCEPNSQCCNILLQACVEACQF--------DRAFRLFR----SWTLSKTQVALGEDY 472
+AG N LL A + D + F+ S++L A G +Y
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 473 DGNTDRISNMEHKDKQSITN--------TPNF-----VPNSHYSSFDKRFSFKPTTTTYN 519
G +RI N K+ Q + NF + + K+ +KP +N
Sbjct: 578 LG-IERIEN-RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ + Y + + ++ +R GLSP+ +++ L+D G A +ILK + +
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD+V+Y T IK R +++A + EM I+P + TY T + + G E+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ V + M K + N+ K +++ +C
Sbjct: 756 ED---VIECMAKNDCRPNELTFKMVVDGYC 782
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 180/422 (42%), Gaps = 34/422 (8%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM 315
+ + + G Y + + + + Q L++ + ++++ + K+ +++++ M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+++G + +YN++L G + ++I G + + +KG LK D FT ST++ A
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEMRSKG-LKFDEFTCSTVLSACAR 293
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A + ++ S G P T+T+++L+ AG+ +A+ + +EM + C +S
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 436 CNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDK 487
N L+ A V A A + T ++ T V G D + + K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
++ VPN+ +++ S + N ++K C +M++ G SPN
Sbjct: 414 EA-----GCVPNT--CTYNAVLSLLGKKSRSNEMIKMLC-----------DMKSNGCSPN 455
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+W ++ CG G + ++ + M+ G PD + T I R A ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM + TY LL A +R G + V DM G+K +T +++ +
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGEN---VISDMKSKGFKPTETSYSLMLQCYA 572
Query: 668 EG 669
+G
Sbjct: 573 KG 574
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 58/401 (14%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWW 379
+ D+ +Y +L A G A +++ +K + L TY+ I+ VF + W
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL----VTYNVILDVFGKMGRSW 262
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L V ++M S G+ + T S++++ACA GL+ +A F E+ G EP + N L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
LQ +A + A + + ME N P
Sbjct: 323 LQVFGKAGVYTEALSVLK-----------------------EMEE----------NSCPA 349
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+ TYN L+ A + +A ++ M G+ PN I++T +IDA
Sbjct: 350 D--------------SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +G + AL++ M+E G P+ Y + + + R + + +MK PN
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
T+ T+L G V + V+++M G++ + LI + G D ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNR---VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 677 NQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
GE+T + LL +A + EN+ D++
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I E
Sbjct: 602 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG- 715
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 716 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 400 TWSSLINACANAGLVEQAMHL 420
T+ +++ AG +AM
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDF 793
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P+ + RT++ C S + + ++ +FNS++++ + + +
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++++ G+ D+ +YN L+ G A+EI +K LE K LK D+ +Y+T++K
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI---LKTLE-KSQLKPDLVSYNTVIK 709
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A+++ +M G+ P T+++ ++ G+ + + E M + C P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 432 NSQCCNILLQACVEACQFDRA 452
N +++ A ++ A
Sbjct: 770 NELTFKMVVDGYCRAGKYSEA 790
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 24/354 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 159 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 215
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 216 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNV 275
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 276 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 324
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 325 ---LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P + T+ TL+ A R G L ++C V +M + G K N ++ +C+
Sbjct: 442 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS--GLCRAGRMGETSALLDEMASQKMVPD 304
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 305 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 362
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 363 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 421 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 481 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 523
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L+E++
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY-- 641
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 642 -LYQKMMQ 648
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 313
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 314 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 373
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 374 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 433
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 434 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 467
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 573
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 404
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 463
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 524 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 580
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 581 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 637
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 638 EMEYLYQKMMQNNVVPSNAIHNIMVEA 664
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 175/385 (45%), Gaps = 20/385 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+++ +I+ GD K+ +Y ++ N+ N ++ L++ + L +
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G+ + +YN L+ C G+ A+ ++ E+ + KGV + T+++++
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN---KGV-EPTATTFTSLIS 478
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ Q A K+ M+ G+TPN T+++LI+ + + +A LF+E+++ +P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+L++ + D+AF L Q L D IS + + ++
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDM----HQKGLVPDTYTYRPLISGLCSTGR--VS 592
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPNHI 549
+F+ + H + + K Y+ L+ C + ++AL EM G++ + +
Sbjct: 593 KAKDFIDDLH------KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLV 646
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+LID + + +LK M + G+ PD V YT+ I + K+AF ++ M
Sbjct: 647 CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLM 706
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL 634
+ PN+VTY L+ + G +
Sbjct: 707 VTEECFPNVVTYTALMNGLCKAGEM 731
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 149/357 (41%), Gaps = 25/357 (7%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G + +YN+L+ C A E+ + L KG L DV TY T+V F
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVK---RSLGGKG-LAADVVTYCTLVLGFC 306
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ ++ +++ ++M+ G +P S L++ G ++ A L ++ + G PN
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N L+ + + D+A L+ + +L + G Y D D
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPN-GITYSILIDSFCRSGRLDVA------ 419
Query: 495 NFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
S FD+ T YN L+ C D ++L EM G+ P +
Sbjct: 420 -------ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATT 472
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T LI V+ A ++ M ++G++P+V +T I + ++ +A LF+E+
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+I+P VTY L+ R G ++ + + +DM + G + + LI C
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDG---KIDKAFELLEDMHQKGLVPDTYTYRPLISGLC 586
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 200/510 (39%), Gaps = 86/510 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F + L A+ +D + +Y ++I+ G C GD + +++
Sbjct: 401 ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN--GQCKFGDLSAAESLF 458
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ ++ V F SL++ DL+ ++Y M G+ ++ ++ L+ C
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A E++ E+ +E K +K TY+ +++ + A ++ EDM G+ P+
Sbjct: 519 NKMAEASELFDEL--VERK--IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLF 456
T T+ LI+ + G V +A +++ + + N C + LL C E RL
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEG-------RLM 627
Query: 457 RSWTLSKTQVALGEDYD------------GNTDRISNMEH-KDKQSITNTP-NFVPNSHY 502
+ + S + G + D DR + + KD P N + S
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687
Query: 503 SSFDKRFSFK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
++ K SFK P TY LM C + R L M+ +
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747
Query: 546 PNHISWTILIDACGGSGNVEGAL----------------------------------QIL 571
PN I++ +D GN++ A+ ++L
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVL 807
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E+G+ PD V Y+T I RS + + L++ M + ++P+LV Y L+
Sbjct: 808 SEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVN 867
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
G E+ + + DM + G ++ YL++
Sbjct: 868 G---ELDKAFELRDDMLRRGIIPDNKYLQK 894
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 145/360 (40%), Gaps = 56/360 (15%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ GV D + + ++++ C + + A+E +++ +EA G L + TY+ +
Sbjct: 211 ELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE---KIRWMEANG-FDLSIVTYNVL 266
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A++VK + G+ + +T+ +L+ E + L +EM++ G
Sbjct: 267 IHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGF 326
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P + L+ + + D A+ L V +G
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELV---------VKVG-------------------- 357
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
RF F P YN L+ + C D + + L + M + L PN
Sbjct: 358 ------------------RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPN 399
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ILID+ SG ++ A+ M +DG+ V AY + I + L A SLF
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM + ++P T+ +L+ S Y +VQ+ +Y M G N LI C
Sbjct: 460 EMTNKGVEPTATTFTSLI---SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 127/329 (38%), Gaps = 53/329 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + + G + ++ YN L+ + C G+ A+ +Y + + L+ + TYS +
Sbjct: 351 ELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN----LRPNGITYSIL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +A+ + M+ G+ ++SLIN G + A LF EM G
Sbjct: 407 IDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGV 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP + L+ + Q +AF+L+ +
Sbjct: 467 EPTATTFTSLISGYCKDLQVQKAFKLY------------------------------NKM 496
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I N P T+ L+ C+ +A L +E+ + P
Sbjct: 497 IDN-----------------GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +LI+ G ++ A ++L+ M + G+ PD Y I + R+ +A +
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFID 599
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ N + Y LL + G L E
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEGRLME 628
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T + ++++ C D+ R K + M G + +++ +LI V A++
Sbjct: 222 RPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVE 281
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + + G++ DVV Y T + R ++ + L +EM P L+
Sbjct: 282 VKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLR 341
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ G + + + + + + G+ N LI C+G DK +
Sbjct: 342 KQGKIDDAYELVV---KVGRFGFVPNLFVYNALINSLCKGGDLDKAE 385
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 172/398 (43%), Gaps = 57/398 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ F + K+M+KL + D+ ++NI L A E++G + +G + DV
Sbjct: 94 EFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGR---MVERG-REPDV 149
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN-------------------------- 397
T++ I+ K + A++ +ML G+ P+
Sbjct: 150 VTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIG 209
Query: 398 ----------TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
T+ +++LI+ AG +++A+ + M + GC+P+ N+LL C
Sbjct: 210 VISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEF 269
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F+ A +L + S + + Y+ H DK + VP K
Sbjct: 270 MFEEAVKLLKKMECSAIEPDV-YSYNQLLKAHCKANHPDKAYLFMVTKMVP--------K 320
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F +YN ++KA C+ + R L EM G++P+ +++TILI A GN +
Sbjct: 321 GFC---DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L +M G+ PD + YTT I +S +++ A S+F +M I P++V+Y L+
Sbjct: 378 MAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALI 437
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ + EV +Y+ M + G ++ K +I
Sbjct: 438 NGFCKSLRVGEVMH---LYEQMLQRGSFPDEVTYKLII 472
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 23/334 (6%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ + NM G+ D + L C G LA E+ + + + G+ ++ Y+
Sbjct: 168 AVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYEL---IIGVISGGLSEVSTLVYN 224
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ F A AL + M G P+ +T++ L+N C N + E+A+ L ++M +
Sbjct: 225 ALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECS 284
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKD 486
EP+ N LL+A +A D+A+ + + K G D +S N K
Sbjct: 285 AIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPK----------GFCDVVSYNTIIKA 334
Query: 487 KQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTV 542
SI+N Y F++ R P T+ IL+KA + K L++ M +
Sbjct: 335 FCSISNN-----RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGM 389
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I +T +ID SG VE A I M E G++PDVV+Y I +S R+ +
Sbjct: 390 GLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEV 449
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L+E+M P+ VTY ++ A R L +
Sbjct: 450 MHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSD 483
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ M + G+ D+ ++ IL+KA GN+ +A+++ + + G+L +F Y+TI
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKL---LDLMAGMGLLPDRIF-YTTI 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + +MA + DM+ G+TP+ +++++LIN + V + MHL+E+MLQ G
Sbjct: 402 IDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGS 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSK 463
P+ +++ A V + A R++ R TL +
Sbjct: 462 FPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDR 500
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 172/414 (41%), Gaps = 51/414 (12%)
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------- 341
++ FN L+N +H L F + + KLG D + N LL+ CL G
Sbjct: 88 MFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHD 147
Query: 342 --------LAQEIYGEV-----KHLEAKGVLKL------------DVFTYSTIVKVFADA 376
L Q YG + K E + L+L DV Y+ I+ F
Sbjct: 148 HVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKD 207
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K A + +M+ + PN +T++SLI G +++A+ L EM PN
Sbjct: 208 KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTF 267
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
NIL+ + + +A S V + + + N +++ D + N
Sbjct: 268 NILIDGLCKEGEVKKA--------TSVLSVMIKQGVEPNVVTYTSL--MDGYFLVKEVNK 317
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
+ +++ R P +Y++++ C + +A L EM ++PN ++++ L
Sbjct: 318 AKHV-FNTISLR-GVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSL 375
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID SG + ++ + G +++ Y + + ++ ++ +A +L +MK I
Sbjct: 376 IDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
QP++ TY TL+ + G L + Q+ +YQD+ GY N +I C+
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQR---IYQDLLCKGYPLNIRMYTVMINGLCK 486
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 36/336 (10%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
++A+DL Y M + ++ ++N L+ C+ G +E G + + V
Sbjct: 211 IDAYDL------YSEMIVKKIYPNVVTFNSLIYGFCIVGQ---LKEAVGLLNEMSLNNV- 260
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V+T++ ++ + A V M+ GV PN +T++SL++ V +A H
Sbjct: 261 NPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKH 320
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG-- 474
+F + G PN ++++ + D A +LF+ L + V DG
Sbjct: 321 VFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC 380
Query: 475 NTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--R 531
+ RIS++ + D+ + P TYN L+ C ++ +
Sbjct: 381 KSGRISDVWDLIDEINNRGQP------------------ANIITYNSLLNGLCKNHQVDK 422
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL+ +M+ G+ P+ ++T L+D +G ++ A +I + + G ++ YT I
Sbjct: 423 AIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMIN 482
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +A SL +M+ P+ VTY TL+ A
Sbjct: 483 GLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 153/396 (38%), Gaps = 56/396 (14%)
Query: 219 RAD-ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D I++ + F K + ++ A Y PN+ ++I I G ++
Sbjct: 191 RPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVG 250
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ NV N+Y FN L++ ++K V M K GV ++ +Y L+
Sbjct: 251 LLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYF 310
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
L A+ ++ + +GV +V +YS ++ K A+K+ ++M +T
Sbjct: 311 LVKEVNKAKHVFNTI---SLRGVTP-NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT 366
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PNT+T+SSLI+ +G + L +E+ G N N LL + Q D+A L
Sbjct: 367 PNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIAL 426
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
KD+ +P
Sbjct: 427 LTKM-------------------------KDE----------------------GIQPDM 439
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+TY L+ C + + + ++ G N +T++I+ G + AL +L
Sbjct: 440 STYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M ++G PD V Y T I ++ + +A L EM
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 28/331 (8%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +E KG+ + ++FT++ ++ F+ A + +L G P+T+T ++L+
Sbjct: 77 QQMELKGI-QPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCL 135
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVA 467
G V++A++ + +++ + L+ ++ + A +L R L + V
Sbjct: 136 NGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVI 195
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKAC 525
+ Y D KDK I Y + + K P T+N L+
Sbjct: 196 M---YTAIIDSFC----KDKLVI---------DAYDLYSEMIVKKIYPNVVTFNSLIYGF 239
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C L+NEM ++PN ++ ILID G V+ A +L +M + G+ P+V
Sbjct: 240 CIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNV 299
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V YT+ + K + +A +F + + PN+ +Y ++ + V + + +
Sbjct: 300 VTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM---VDEAVKL 356
Query: 644 YQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+++M N LI+ C+ G I D
Sbjct: 357 FKEMHLKNMTPNTVTYSSLIDGLCKSGRISD 387
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 135/321 (42%), Gaps = 30/321 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+F ++ I+ +++A+ + M G+ P T++ LIN ++ + A +
Sbjct: 53 IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112
Query: 423 EMLQAGCEPNSQCCNILLQA-CV-----EACQF-DRAFRLFRSWTLSKTQVALGEDYDGN 475
++L+ G +P++ N LL+ C+ EA F D R + + L QV+ G +G
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIR--KRFHLD--QVSYGTLING- 167
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
+ E + + + +P Y ++ + C D + A
Sbjct: 168 --LCKSGETRAALQL-----------LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L +EM + PN +++ LI G ++ A+ +L M + ++P+V + I
Sbjct: 215 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ +K+A S+ M ++PN+VTY +L+ Y + EV + V+ + G
Sbjct: 275 CKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG---YFLVKEVNKAKHVFNTISLRGVT 331
Query: 654 ANDTYLKELIEEWCEGVIQDK 674
N +I C+ + D+
Sbjct: 332 PNVHSYSVMINGLCKNKMVDE 352
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 94/248 (37%), Gaps = 56/248 (22%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP ++ ++++ + A+ ++M G +P NIL+ CQ + AF
Sbjct: 50 TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + ++P
Sbjct: 110 MVAKIL-----------------------------------------------KLGYQPD 122
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH---ISWTILIDACGGSGNVEGALQIL 571
T T N L++ C + +VK +N V H +S+ LI+ SG ALQ+L
Sbjct: 123 TVTVNTLLRGLCLN-GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLL 181
Query: 572 KIMREDGM---SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ + +G+ PDV+ YT I + K + A+ L+ EM +I PN+VT+ +L+
Sbjct: 182 R--KIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGF 239
Query: 629 SRYGSLHE 636
G L E
Sbjct: 240 CIVGQLKE 247
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 197/421 (46%), Gaps = 32/421 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + K+ +P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 206 ALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVI 265
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + + +YN LL+ AGN + A + +K +E
Sbjct: 266 AACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRV---LKEMEES 322
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K D TY+ + +A A +++ A K + M+S G+ PN T+++++ A NAG V++
Sbjct: 323 GC-KPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDE 381
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G P N++L + +F+ + + S T +A
Sbjct: 382 ALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLA 441
Query: 468 L--GEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSH---------YSSFDKRFS--FKP 513
+ +G R+ M+ + +T N + +++ + +D+ + F P
Sbjct: 442 VCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTP 501
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ D+ ++++N+M+ G PN +S+++L+ GN G I
Sbjct: 502 CLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIE 561
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K + E + P V T + + +RL+ F+E+ +P+LV + ++L ++
Sbjct: 562 KEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKN 621
Query: 632 G 632
G
Sbjct: 622 G 622
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 163/401 (40%), Gaps = 59/401 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +L+ + V ++N +++V + + + M+
Sbjct: 192 TVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRA 251
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L E + L+++G + V TY+ +++VF A
Sbjct: 252 AGVEPDGFTASTVIAAC---GRDGLVDEAVAFFEDLKSRGHVPC-VVTYNALLQVFGKAG 307
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L + A AG E+A + M+ G PN+ N
Sbjct: 308 NYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYN 367
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A A + D A LF W
Sbjct: 368 TIMTAYGNAGKVDEALALF-DWM------------------------------------- 389
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 390 ---------KKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTML 440
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G ++L+ M+ G+ + T I R AF +++EM
Sbjct: 441 AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFT 500
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
P L TY LL SR G Q ++ M G+K ND
Sbjct: 501 PCLTTYNALLSVLSRQGDWTAAQ---SIINKMKNEGFKPND 538
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 198/462 (42%), Gaps = 44/462 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + TI+ G G ++ A+++ ++ + +N ++ + +F LE+
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N +L C G + + ++ +++ GV +L T++T++
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVC---GKRGMEGYVTRVLERMKSCGV-ELCRDTFNTLIS 476
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M +AG TP T+++L++ + G A + +M G +P
Sbjct: 477 AYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKP 536
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N ++LLQ A +EA + + +F SW + +T V ISN
Sbjct: 537 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLV------------ISNF 584
Query: 483 EHKDKQSITNT-PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + I + H KP +N ++ + Y + + + +
Sbjct: 585 KCRRLEGIERAFQEVMARGH----------KPDLVIFNSMLSMYAKNGMYRKAGEMFDSI 634
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GLSP+ I++ ++D S A +ILK ++ + PDVV+Y T + + +
Sbjct: 635 KQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLI 694
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
K+A + EM ++P +VTY TL+ Y S + V M + +
Sbjct: 695 KEAQRILSEMIADGVRPCVVTYHTLVGG---YASREMFSEAREVVSYMIQRNLSPMELTY 751
Query: 660 KELIEEWCEGVIQDKNQN-QGEVTLCRRTNSQRPQSLLLEKV 700
+ +++ +C+ D+ + E+ R + Q+ S L +V
Sbjct: 752 RRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTLTARV 793
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 111/239 (46%), Gaps = 10/239 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+ P IL + F K R L RA+ P++ I +++ + G Y K+
Sbjct: 569 VFPSWVILRTLVISNF-KCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKA 627
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNILLK 332
+++ ++ ++ ++ +NS+M++ A + + E K +++L + D+ SYN ++
Sbjct: 628 GEMFDSIKQGGLSPDLITYNSMMDMYAKSNE-SWEAEKILKRLKTSQLKPDVVSYNTVMN 686
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G AQ I E + A GV + V TY T+V +A + + A +V M+
Sbjct: 687 GFCKQGLIKEAQRILSE---MIADGV-RPCVVTYHTLVGGYASREMFSEAREVVSYMIQR 742
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++P +T+ ++++ A ++A E+ + + + + L A VE+ QF R
Sbjct: 743 NLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLST-LTARVESAQFRR 800
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 174/390 (44%), Gaps = 31/390 (7%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F ++ A +++ + ++ +++ G ++ Y L+ CC G A+
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ K L + +TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEM----GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTL 461
+N G + A +F+EM + G N N L+ C E A + ++ +S+ +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYN+L
Sbjct: 335 NPNLITYNTLIDGFCSV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNVL 379
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ +++TILID S N+E A+Q+ M E G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV Y+ I C++ ++ +A LF+ M ++PN V Y T++ + GS +
Sbjct: 440 VPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY--- 495
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L +++DM + N LI C+
Sbjct: 496 RALRLFRDMEEKELAPNVASYSYLIRVLCK 525
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 185/419 (44%), Gaps = 56/419 (13%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A KV + M S + PN IT+++
Sbjct: 288 FKVFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RS 458
LI+ + G + +A+ L ++ G P+ N+L+ A ++ R
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK + D +D NME + +S VP+ H T
Sbjct: 404 IKPSKVTYTILIDTFARSD---NMETAIQLRSSMEELGLVPDVH---------------T 445
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y++L+ C +K MNE M L PN + + +I G+ AL++
Sbjct: 446 YSVLIHGFC-----IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRL 500
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E ++P+V +Y+ I+V + ++LK+A L E+M I P+ + RA++
Sbjct: 501 FRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRAKT 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 149/342 (43%), Gaps = 32/342 (9%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E+K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSK 463
+E+A LF EM + G N +L+ + + F ++ +T +
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNC 273
Query: 464 TQVALGEDYDGNT-DRISNMEHKDKQSIT------NT------PNFVPNSHYSSFD--KR 508
L + DG T D + ++ ++ NT N D K
Sbjct: 274 VMNQLCK--DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TYN L+ C+ KAL ++++ GLSP+ +++ +L+ G+ G
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +++K M E G+ P V YT I RS ++ A L M+ + P++ TY L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G ++E + +++ M + + N+ +I +C+
Sbjct: 452 GFCIKGQMNEASR---LFKSMVEKMLEPNEVIYNTMILGYCK 490
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DV ++ IK C + ++++F L E++ + PN+V Y TL+ + G E+++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG---EIEKAK 218
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQG 679
++ +M K G AN+ LI G+ ++ + QG
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLI----HGLFKNGIKKQG 252
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 196/470 (41%), Gaps = 47/470 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + AL V E M S + PNT T++ LI V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E KD PN V N + +K S P + T+N
Sbjct: 518 DLFDSLEQKDV-----IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ CTD +A L +M + L P + TILI G+ + A + + M G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL+ A + +MK + P+L TY +L++ YG L
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG---YGDLGRTN 689
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL--L 696
V + M G + + LI+ E ++ GE +C +N + L
Sbjct: 690 SAFVVLKRMHDTGCEPSQHTFLSLIKHLLE--MKYGKVKGGEPGVCVMSNMMEFDIVVEL 747
Query: 697 LEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGTDEF 746
LEK+ H A++ + G+ ++ + V M++ + E
Sbjct: 748 LEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 194/450 (43%), Gaps = 67/450 (14%)
Query: 197 IVQLC--VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR-AYDASKKHLSS 253
++ LC +NK D + ++Y I+ + L + R FG LV ++ Y +
Sbjct: 162 VLDLCRKMNK-DESFELKYKLIIGCYNTLLNSLAR-FG----LVDEMKQVYMEMLEDKVC 215
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTL 309
PN+Y +++ G C G+ ++ + + + + + SL+ DL
Sbjct: 216 PNIYTYNKMVN--GYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+K M G + +Y L+ C+ A +++ ++K + ++ TY+ +
Sbjct: 274 KVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVR----TYTVL 329
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K ++ AL + ++M G+ PN T++ LI++ + +E+A L +ML+ G
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ + + A D + ME ++
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAL-----------------------DVVELMESRN--- 423
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNH 548
+P T TYN L+K C + ++ ++N+M + P+
Sbjct: 424 ---------------------LRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDV 462
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LID SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++ + PN+V Y L+ + G ++E
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 150/345 (43%), Gaps = 25/345 (7%)
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++K+C +T+ ++ ++ E+ + KL + Y+T++ A +V
Sbjct: 148 LMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML V PN T++ ++N G VE+A +++AG +P+ L+ +
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 448 QFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
D AF++F+ L + +VA G +E + +++ + Y
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC-----VERRIDEAMDLFVKMKDDDCY-- 320
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
PT TY +L+KA C + +A L+ EM G+ PN ++T+LID+
Sbjct: 321 --------PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC 372
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A ++L M E G+ P+V+ Y I + ++ A + E M+ ++PN TY
Sbjct: 373 KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYN 432
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L++ + V + + V M + + LI+ C
Sbjct: 433 ELIKGYCK----RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ Y S P TY L+ C D + EM G N +++T LI
Sbjct: 238 NQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHG 297
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A+ + M++D P V YT IK S+R +A +L +EM+ I+PN
Sbjct: 298 LCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPN 357
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ TY L+ + L + ++ L M + G N LI +C+ G+I+D
Sbjct: 358 IHTYTVLIDSLCSQCKLEKARELLG---QMLEKGLMPNVITYNALINGYCKRGMIED 411
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 156/428 (36%), Gaps = 78/428 (18%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + K + + A +D+ ++ PN+ + +ID G C G ++ + E
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID--GYCKAGKVNEAHLMLEK 557
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+N N FN+L++ D LK + + M K+ + +++ IL+ G+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Y + + + G K D TY+T ++ + Q A + M GV+P+
Sbjct: 618 ---FDHAYRRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLF 673
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE------------AC 447
T+SSLI + G A + + M GCEP+ L++ +E C
Sbjct: 674 TYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVC 733
Query: 448 ------QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF-VPNS 500
+FD L G T + E K I N V
Sbjct: 734 VMSNMMEFDIVVELLEKMV-----------EHGVTPNAKSYE-KLMLGICEIGNLRVAEK 781
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP------------ 546
+ ++ P+ +N L+ CC + ++++M VG P
Sbjct: 782 VFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841
Query: 547 -----------------------NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ ++W I+ID G G VE ++ +M ++G +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSS 901
Query: 584 VAYTTAIK 591
Y+ I+
Sbjct: 902 QTYSLLIE 909
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 24/354 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 155 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 211
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 212 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNV 271
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 272 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 320
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 321 ---LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P + T+ TL+ A R G L ++C V +M + G K N ++ +C+
Sbjct: 438 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 309
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 310 GLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 369
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 370 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 429
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 430 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 463
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 569
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS--GLCRAGRMGETSALLDEMASQKMVPD 300
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 301 GFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 359 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 477 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 519
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L E++
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEY-- 637
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 638 -LYQKMMQ 644
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 400
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 459
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 520 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 576
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 577 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLI 633
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 634 EMEYLYQKMMQNNVVPSNAIHNIMVEA 660
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 55/391 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF----NSLMNVNAHDLKFTL 309
P + T+ID K+ +E+L+ + + + + N L N + DL+
Sbjct: 300 PTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRLAF 359
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ ++ D YN LL AC AG+ ++ E+K ++ ++LD TY+T
Sbjct: 360 QLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQS---IQLDEITYNT- 414
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
LI C + +A+ LFEEM Q G
Sbjct: 415 ----------------------------------LIKGCGRKKRLNEAISLFEEMKQIGI 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME--HKDK 487
+PN N LL +CV+ + + A+R F + Q + D + ++ ++ H ++
Sbjct: 441 KPNRISFNSLLDSCVKCNKMNVAWRYFEEM---RKQYGIFPDNFTYSILVNGIKTNHSNR 497
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ + + FKP YN L+ AC + + L EM+ +
Sbjct: 498 DELLRAITLL-----EQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIE 552
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ ILI A G ++ GA ++ + M++ + + V Y + CVR+ RL QA
Sbjct: 553 PSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQF 612
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
E+MK + N V Y T+++ + E
Sbjct: 613 IEQMKSQNLPINTVLYTTIIKGFCKLNQTEE 643
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/441 (18%), Positives = 176/441 (39%), Gaps = 57/441 (12%)
Query: 201 CVNKPDVNLA------IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
C+N D+N ++ + + +I + ++ G+K+ L A+ ++ K+ P
Sbjct: 383 CINAGDLNRGFQLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKP 442
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314
N +++D C C + +E++R Q I+ N FT + N
Sbjct: 443 NRISFNSLLDSCVKCNKMNVAWRYFEEMRKQ---YGIFPDN-----------FTYSILVN 488
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
G+ + ++ + LL+A L ++ ++ G K D Y++++
Sbjct: 489 ----GIKTNHSNRDELLRAITL-------------LEQIQETGQFKPDEILYNSLIDACV 531
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
Q +++ ++M + + P+++T+ LI A + A +FEEM Q N
Sbjct: 532 KFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPINDV 591
Query: 435 CCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
L+ ACV + D+A + +S L V G +++ E K
Sbjct: 592 TYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFC-KLNQTEEAMK---- 646
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
++S + P TYN L+ + +A L E+ + P+ I
Sbjct: 647 ---------YFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKPDLI 697
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ L+ GN++ + ++ M ++PD ++ C+ ++ ++++
Sbjct: 698 TFSTLLKGHCRRGNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYHNGVQIYDQF 757
Query: 610 KHYQIQPNLVTYITLLRARSR 630
+H QI + + ++R S+
Sbjct: 758 QH-QIPQSTQLLLIIIRLHSQ 777
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 56/402 (13%)
Query: 283 RSQNVTLNIYVFN----SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
R + +++ +N +L NA L + E ++ MQ+ G D +Y+I+L+ C AG
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAY--EKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPN 397
A+E+ G+++ GV KL+V TYS ++ A AL++ + M S G P+
Sbjct: 88 ELDKAKELLGQLRE---SGV-KLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SL+ + + +A LFE M +AGCEPN + LL +A + D A RL+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 458 SWT--------LSKTQVALG--------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ T G E D ++ D + + +
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 502 YS----------------------SFDKRFS--FKPTTTTYNILMKACC-----TDYYRV 532
++ +F++ S P+ +N L+ A C D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
M M+ PN ++ I++D + ++ A +++ M G+SPDVV Y+ +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +L +A L EEM + P+ T ++L A S+ G +
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 21/392 (5%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VM 321
G+C G+ K++ + LR V LN+ ++ +++ A + LE++K M G +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ ++N LLK C +G + E + +++ AK + +V +YST++ A
Sbjct: 142 PDVVTFNSLLKGLC-SGERM--SEAFVLFEYM-AKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL- 440
A ++ E+M+ P+ + ++S + A V +A +M+ G + ++ + ++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 441 ----QACVEACQFDRAFRLFRSWTLSKT----QVALGEDYDGNTDRISNMEHKDKQSITN 492
+ E Q L RS L + + + ++ + + + + H +S
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS-KR 316
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
P+ V K F P TYNI++ C + L+NEM GLSP+ ++
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ L+D G ++ A +L+ M ++G+ PD + + ++ ++ A S E MK
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P+LVTY TLL + G + E LA
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 184/434 (42%), Gaps = 47/434 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMAD 323
+V GI I D R NV LN+ V +A+ LK + +M + + D
Sbjct: 150 EVVGIVKVMEDEYRIKPDTRFYNVLLNVLV-------DANKLKLVESAHSSMVRRRIRHD 202
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++NIL+KA C A A + E+ L D T++TI++ + + AL
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYG----LSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++KE M+ G +T + LIN G ++QA+ +E + G P+ N L+
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM----EHKDKQSITN------- 492
+ A + + L L D IS + E ++ I +
Sbjct: 319 CKIGHAKHAMEVVDAMLLG----GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDC 374
Query: 493 TPNFVP-NSHYSSFDKRFSFK---------------PTTTTYNILMKACC--TDYYRVKA 534
+PN V N+ SS K P T+N L++ C +++
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMD 434
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM+ G P+ ++ +LID+ S +E AL +LK M +G + +VV Y T I
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC 494
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++KR+++A +F+EM+ + + VTY TL+ + + + Q + M G +
Sbjct: 495 KNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLM---DQMIMEGLRP 551
Query: 655 NDTYLKELIEEWCE 668
+ L+ +C+
Sbjct: 552 DKFTYNSLLTHFCK 565
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 180/403 (44%), Gaps = 34/403 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ S ++ + F ++M + +L L + + M + G + N+L+ C
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ ++G + D FTY+T+V + A++V + ML G+ P+
Sbjct: 287 GRIDQALSF---IQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI+ G +E+A+ + ++M+ C PN+ N ++ + + + D A + R
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFK 512
T SK + D I + + ++H S+ D K +
Sbjct: 403 LLT-SK---GILPDVCTFNSLIQGL-------------CLSSNHKSAMDLFEEMKGKGCR 445
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN+L+ + C+ +AL + EM G + N + + LID + +E A +I
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+S D V Y T I +SKR++ A L ++M ++P+ TY +LL +
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQ 672
G ++++ + Q M +G + LI C+ G +Q
Sbjct: 566 TG---DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 203/449 (45%), Gaps = 39/449 (8%)
Query: 233 KKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D V+ALR ++ ASK+ P+ + I+ G G + R + E+++ +
Sbjct: 73 RQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDR 132
Query: 292 YVFNSLMNVNAHDLKFTL-----EVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQE 345
+F L+ V ++ KF L + K M+ + + D YN+LL A L +
Sbjct: 133 GIF--LIFVESYG-KFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVES 189
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + + ++ DV T++ ++K A + A+ + E+M S G++P+ T+++++
Sbjct: 190 AHSSM----VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIM 245
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G ++ A+ + E+M++ GC N+L+ + + D+A LS Q
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA--------LSFIQ 297
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDKRF--SFKPTTTTYNIL 521
A+ E + D+ + ++ N + ++ ++ D P TYN L
Sbjct: 298 EAVSEGF--RPDQFT------YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSL 349
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + ++++M + SPN +++ +I + V+ A +I +++ G+
Sbjct: 350 ISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGI 409
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV + + I+ S K A LFEEMK +P+ TY L+ + S ++++
Sbjct: 410 LPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLC---SSRKLEE 466
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L + ++M G N LI+ +C+
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 182/428 (42%), Gaps = 36/428 (8%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC- 269
+ Y C P D+ + F K+ + AL + P+ + T+++ G+C
Sbjct: 265 VEYGC--PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN--GLCK 320
Query: 270 -GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
G + + + + + +IY +NSL++ +++ +++ M + +
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ + C A EI + L +KG+L DV T++++++ + + A+ +
Sbjct: 381 YNAIISSLCKENRVDEATEI---ARLLTSKGILP-DVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M G P+ T++ LI++ ++ +E+A++L +EM GC N N L+ +
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Query: 447 CQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + A +F L S+ V DG + R+ + Q I
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME--------- 547
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+P TYN L+ C D + ++ M + G +P+ +++ LI
Sbjct: 548 --------GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G V+ A ++L+ ++ GM AY I+ + R +A LF EM P+ +
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659
Query: 620 TYITLLRA 627
TY + R
Sbjct: 660 TYKIVYRG 667
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-------GD 271
R +++ + F K + + A +D + S + T+ID G+C
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID--GLCKSKRVEDAA 538
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ + I E LR T +NSL+ D+K ++ + M G D+ +Y
Sbjct: 539 QLMDQMIMEGLRPDKFT-----YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C AG +A + ++ ++ KG++ L Y+ +++ A+++ +M
Sbjct: 594 LISGLCKAGRVQVASRL---LRSIQMKGMV-LTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Query: 390 LSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEP 431
L P+ IT+ + C G + +A+ EM++ G P
Sbjct: 650 LDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIP 692
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 189/422 (44%), Gaps = 28/422 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYED 281
FCN R + +L+S + A D H +PN+ T+ID G+C M RA +++
Sbjct: 174 FCNEKRA-EEALELLSMM-ADDGDGSH--TPNVVTYTTVID--GLCKAQMVDRAKGVFQH 227
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + V N + + L++ ++ K +++ + M G+ D Y +LL C G
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGR 287
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ I+ V KG+ K +V Y ++ +A + M+ GV+P+
Sbjct: 288 CTEARNIFDSVIR---KGI-KPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHH 343
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ + A A ++++AMH+F++M Q PN L+ A + + D A F
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ D + + + DK F D+ + T +N
Sbjct: 404 I----DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFF------EVLDQ--GIRLDTVFFN 451
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM C + ++A L++ M VG+ P+ IS+ L+D +G ++ A ++L ++
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD V Y T + +++R+ A+SLF EM + P++VTY T+L + G E
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571
Query: 638 QQ 639
++
Sbjct: 572 KE 573
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 160/370 (43%), Gaps = 44/370 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + G D+ SY+ILLK C A E+ + + G +V TY+T++
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMAD-DGDGSHTPNVVTYTTVIDG 211
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A+ A V + M+ GV PN T++ LI+ + G ++ + + +EM G +P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 433 SQCCNILLQ------ACVEACQ-FDRAFRLFRSWTLSKTQVAL-GEDYDGNTDRISNMEH 484
+LL C EA FD R ++ + L G +G+ +S M
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS---LSEMHS 328
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE------ 538
+ N + P+ H +NI+ A Y KA+++E
Sbjct: 329 FLDLMVGNGVS--PDHH---------------IFNIMFCA-----YAKKAMIDEAMHIFD 366
Query: 539 -MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
MR LSPN +++ LIDA G V+ A+ M ++GM+PD+ +++ +
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ ++A LF E+ I+ + V + TL+ R G + E Q+ + + M + G + +
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL---MLRVGVRPDVI 483
Query: 658 YLKELIEEWC 667
L++ C
Sbjct: 484 SYNTLVDGHC 493
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 161/401 (40%), Gaps = 59/401 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I+FC + KK + A+ +D ++ SPN+ +ID G + +
Sbjct: 346 NIMFC----AYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T +I+VF+SL+ + E++ + G+ D +N L+ C G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ AQ + L + ++ DV +Y+T+V A K+ + ++S G+ P+
Sbjct: 462 RVMEAQRLI----DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDK 517
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++L++ A ++ A LF EML G P+ N +L + +F A L+ S
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S+TQ+ + TY
Sbjct: 578 MINSRTQMNI-----------------------------------------------YTY 590
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + + +A + + + + L + + I+I A G E A+ + +
Sbjct: 591 NIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISA 650
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ PDV Y + ++ L++ LF M+ PN
Sbjct: 651 YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPN 691
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 44/280 (15%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN-TITWSSLINACANAGLVEQAMH-LF 421
FTY+ ++ F + +L G N T+ +S L+ +A V++A L
Sbjct: 93 FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILL 152
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M + GC P+ +ILL+ + + A L + +D DG
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLS---------MMADDGDG------- 196
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
++TPN V TT + L KA D R K + M
Sbjct: 197 ---------SHTPNVVT---------------YTTVIDGLCKAQMVD--RAKGVFQHMID 230
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ PN+ ++T LI G + +Q+L+ M G+ PD Y + ++ R +
Sbjct: 231 KGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTE 290
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A ++F+ + I+PN+ Y LL + GSL E+ L
Sbjct: 291 ARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKAC 334
+++ ++ + +T ++ +N++++ +F+ E+Y +M ++ +YNI++
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C E + L +K L+LD+FT + ++ + A+ + + + G+
Sbjct: 598 C---KNNFVDEAFKMFHSLCSKD-LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ T+ + G +E+ LF M + G PNS+ N L++ + +RA
Sbjct: 654 VPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 166/384 (43%), Gaps = 33/384 (8%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN L+ A ++ + M G+ D+ + NIL+ + C A + ++
Sbjct: 70 FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L L+ D T++T+++ AL + + M+ G PN +T+ +LIN
Sbjct: 130 KLG----LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 185
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G A+ L M Q C+P+ ++ + + Q AF LF +G+
Sbjct: 186 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM--------VGQG 237
Query: 472 YDGNTDRISNMEHK-----DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ +++ H + + +T N + NS P ++ ++ A C
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS---------KIMPDVVIFSTVVDALC 288
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A +++ M G+ PN +++ L+D ++ A+++ M +G +P+V+
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T I + +R+ +A LFEEM ++ PN VTY TL+ G L Q +A++
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL---QDAIALF 405
Query: 645 QDMWKAGYKANDTYLKELIEEWCE 668
+M G + + L++ C+
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCK 429
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 178/436 (40%), Gaps = 62/436 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D + A ++ + Q ++ +I+ + S
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 247
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M D+ ++ ++ A C G A ++ V +
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV---VDMMI 304
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G PN I++++LIN +
Sbjct: 305 IRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 363
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A +LFEEM Q PN+ N L+ + A LF VA G+
Sbjct: 364 DKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM------VAHGQ---- 413
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P TY IL+ C +
Sbjct: 414 -------------------------------------IPDLATYRILLDYLCKKSHLDEA 436
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A I + G+ P+V YT I
Sbjct: 437 MALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 496
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
R L +A LF EM P+ TY T+ + + E + + + Q+M G+
Sbjct: 497 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRAIQLLQEMLARGF 553
Query: 653 KANDTYLKELIEEWCE 668
A+ + L+E C+
Sbjct: 554 SADVSTTTLLVEMLCD 569
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 167/382 (43%), Gaps = 28/382 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G + +++ + + N+ + +L+N + + + ++M++
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 205
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y ++ + C A ++ + + +G+ D+FTY++++ + W+
Sbjct: 206 DVVVYTSIIDSLCKDRQVTEAFNLFSK---MVGQGI-SPDIFTYTSLIHSLCNLCEWKHV 261
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+++ + P+ + +S++++A G + +A + + M+ G EPN N L+
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A ++F + + + Y+ + ++ DK +
Sbjct: 322 HCLQSEMDEAVKVFDTMVHNGYAPNV-ISYNTLINGYCKIQRMDKATYL----------- 369
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDA 557
F++ + P T TYN LM C R++ AL +EM G P+ ++ IL+D
Sbjct: 370 --FEEMCQKELIPNTVTYNTLMHGLC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+++ A+ +LK + M PD+ YT I R+ L+ A +F + ++PN
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 486
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
+ TY ++ R G L E +
Sbjct: 487 VRTYTIMINGLCRRGLLDEANK 508
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 165/436 (37%), Gaps = 41/436 (9%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + ++Y N L+N H F V + KLG+ D A++
Sbjct: 83 YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTT 142
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L++ C+ G G+ HL K + + +V TY T++ A+++
Sbjct: 143 LIRGLCVEGKI-------GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL 195
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + ++S+I++ V +A +LF +M+ G P+ L+ +
Sbjct: 196 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL 255
Query: 447 CQFDRAFRLFRSWTLSKTQ---VALGEDYDG---------NTDRISNMEHKDKQSITNTP 494
C++ L SK V D D + M + + T
Sbjct: 256 CEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTY 315
Query: 495 NFVPNSH---------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
N + + H FD + P +YN L+ C KA L EM
Sbjct: 316 NALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ 375
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
L PN +++ L+ G ++ A+ + M G PD+ Y + + L +
Sbjct: 376 KELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDE 435
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A +L + ++ + P++ Y ++ R G L + ++ ++ G + N
Sbjct: 436 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD---IFSNLSSKGLRPNVRTYTI 492
Query: 662 LIEEWC-EGVIQDKNQ 676
+I C G++ + N+
Sbjct: 493 MINGLCRRGLLDEANK 508
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 163/393 (41%), Gaps = 57/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC-EWKHVTTLLN 266
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ +F+++++ + K T +V M GV ++ +YN L+ CL
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 326
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + H G +V +Y+T++ + + A + E+M + PNT
Sbjct: 327 EMDEAVKVFDTMVH---NGYAP-NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++L++ + G ++ A+ LF EM+ G P+ ILL + D A L +
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK- 441
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T SNM+ P Y
Sbjct: 442 -----------------TIEGSNMD-----------------------------PDIQIY 455
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
I++ C + + + + + + GL PN ++TI+I+ G ++ A ++ M
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+G SPD Y T + +++K +A L +EM
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N ++ A+ F ML P++ N LL + + Q+ F +LS + G
Sbjct: 44 NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVF------SLSNQMDSFG 97
Query: 470 EDYDGNTDRI--SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
D T I ++ H N P F +S K + +P T T+ L++
Sbjct: 98 IPPDVYTLNILINSFCH------LNRPGFA----FSVLAKILKLGLQPDTATFTTLIRGL 147
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + AL ++M G PN +++ LI+ GN A+++L+ M + PDV
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YT+ I + +++ +AF+LF +M I P++ TY +L+ +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHS 251
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+ + H P++ R ++D ++ A+ + + N+ +I ++
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ A +L+ +++ N+ G+ ++ +Y I++ C G A +++ E ++
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME---MD 514
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D TY+TI + K A+++ ++ML+ G + + T + L+ + L
Sbjct: 515 GNGC-SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 573
Query: 415 EQAMHLFEEMLQ 426
+ + E +Q
Sbjct: 574 QSVKQILSEFVQ 585
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 174/425 (40%), Gaps = 41/425 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 74 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 133
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 134 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 189
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 190 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 249
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNM-EHKDKQSITNTP 494
D+A + + K + L + Y NT R + M E K+ I
Sbjct: 250 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEK 306
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
PN +Y L+ C D + L EM G P+ +++
Sbjct: 307 GVRPNH---------------VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 351
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++D G++ A + M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 352 VMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 411
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
+PNLV Y L+ ++ G E Q +Y +M G +D L+ +
Sbjct: 412 GSKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDGLTPDDALYSALVGS----LHT 464
Query: 673 DKNQN 677
DK QN
Sbjct: 465 DKKQN 469
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 250
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 341
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K NEM GL P
Sbjct: 342 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---NEMEKKGLVP 380
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 381 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 440
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 441 DNMLGDGLTPDDALYSALV------GSLH 463
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S ++++D SG V A Q+L M G+ + + Y + + R K + + +
Sbjct: 68 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M++ I+P + TY L+ S + ++ + AV+++M + + +I +C
Sbjct: 128 MENEGIEPTVGTYTILVDGLS---AARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 183
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 162/399 (40%), Gaps = 60/399 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ Y + + +N + L+ V F V M K G ++ +YNILLK
Sbjct: 93 SFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGL 152
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ + L DV +Y+T+++ F + K + AL++ +M +G
Sbjct: 153 CRNLEFGKAVSLLREMR----QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + +TW LI+A AG +++AM L +EM G E + L++ + + DR
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF D + +E D P
Sbjct: 269 LF--------------------DEV--LERGD-------------------------SPC 281
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L++ C R+K + M G+ PN ++T LID G G + ALQ+L
Sbjct: 282 AITYNTLIRGFCK-LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+M + P+VV Y I + + A + E MK + +P+ +TY +LL
Sbjct: 341 NLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAK 400
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTY-LKELIEEWCEG 669
G L E + L Y + + Y D LI C+G
Sbjct: 401 GDLDEASKLL--YLMLKDSSYTDPDVISFNALIHGLCKG 437
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 179/405 (44%), Gaps = 26/405 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
CG+ + +A+++++ + + +N+L+ LK E+++ M + GV ++ +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYT 319
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y L+ C G T A ++ +L + + +V TY+ I+ AL++
Sbjct: 320 YTGLIDGLCGVGKTKEALQLL----NLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACV 444
E M P+ IT++SL+ G +++A L ML+ +P+ N L+
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG-- 433
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ +R + + L ++ G+ N S ++ D + NS
Sbjct: 434 -LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK--- 489
Query: 505 FDKRFSFKPTTTTYNILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSG 562
P + TY ++ C T V K L+ +MR L P+ + L+ + G
Sbjct: 490 ------IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++ + M+ D PDV+++ I +++ +K A SL M H + P+L TY
Sbjct: 544 TLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYS 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ +R+ L + + ++ + M +G++ D ++ + + ++C
Sbjct: 604 KLI---NRFLKLGYLDEAISFFDKMIDSGFEP-DAHICDSVLKYC 644
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
S P +YN +++ C KAL NEM+ G S + ++W ILIDA +G ++ A
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +LK M+ G+ D++ YT+ I+ L + +LF+E+ P +TY TL+R
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
+ G L E + +++ M + G + N LI+ C GV + K Q
Sbjct: 292 FCKLGRLKEASE---IFEFMMERGVRPNVYTYTGLIDGLC-GVGKTKEALQ 338
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + K L AL YD + L + ++ +++ GD K+ +++
Sbjct: 425 ISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQ 484
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N + ++++ L + M+ + + YN LL + C G
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGT 544
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E++ ++ DV +++ ++ A + A + M AG++P+
Sbjct: 545 LDQAWRLFEEMQRDDSFP----DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLF 600
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S LIN G +++A+ F++M+ +G EP++ C+ +L+ C+ + D+
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 237 LVSALRAYDASK-----KHLSS----PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQ 285
L S L++ D +K K +S+ PN T+ID G C M ++ + +R
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMID--GFCKTGMLNVAKGLLCKMRLS 523
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ +++ +N L++ L +++ MQ+ D+ S+NI++ AG+ A
Sbjct: 524 ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSA 583
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + + H L D+FTYS ++ F + A+ + M+ +G P+ S
Sbjct: 584 ESLLVGMSH----AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVEACQFDRAFRLFR 457
++ C + G ++ ++++ + + C ++ C + D A RL R
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLR 694
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 32/354 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
V G+C GD + I +++ + N+ ++ +L+ +F + V K M++ G+
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D YN L+ A A+ E+ + K D FTY + + +A +
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEM----VENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A K ++ML GV PN + + LIN G V +A F M++ G +++ +L+
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602
Query: 441 QACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
V+ + + A +F R ++ + G DG + ++ NM+
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFS-KLGNMQKAS----------- 650
Query: 498 PNSHYSSFDKRFSFKPTTTT--YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
S FD+ T+ YN+L+ C + + K L++EM G PN +++
Sbjct: 651 -----SIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ID SG++ A Q+ M+ G+ PD YTT + C R +++A ++FE
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 176/420 (41%), Gaps = 19/420 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +C +I+ G +++ + + + Q + + + LMN V + E+
Sbjct: 558 PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G+ D+ SY L+ GN A I+ E+ + L +V Y+ ++
Sbjct: 618 FHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM----VQAGLTSNVIIYNMLLG 673
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + A ++ ++M G PN +T+ ++I+ +G + +A LF+EM G P
Sbjct: 674 GFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP 733
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S L+ C +RA +F T K + ++ + + + + T
Sbjct: 734 DSFVYTTLVDGCCRLNDVERAITIFE--TNEKGCASSSAPFNALINWV--FKFGKTELTT 789
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+ N + + + F KP TYNI++ C + K L + M+ L P I
Sbjct: 790 DMINRLMDGSFDKFG-----KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVI 844
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T L++ G + + G+ PD + Y+ I ++ +A L ++M
Sbjct: 845 TYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 610 -KHYQIQPNLVTYITLLRA-RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ I+ RA S + + E++ V ++M + Y + + + ELI E C
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 140/359 (38%), Gaps = 56/359 (15%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M GV +Y L++ N E+ E+K K + + +TY T V
Sbjct: 372 LFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK----KRNIVISPYTYGTAV 427
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A + ++M ++G PN + +++LI A+ + +EM + G
Sbjct: 428 KGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIA 487
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ C N L+ +A + D A RS+ L +
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEA----RSFLLEMVENG----------------------- 520
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
FKP TY + ++ + EM G+ PN
Sbjct: 521 --------------------FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNK 560
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ T LI+ G V A + M E G+ D YT + V++ ++ A +F E
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M+ I P++ +Y TL+ S+ G++ Q+ +++ +M +AG +N L+ +C
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNM---QKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 159/402 (39%), Gaps = 48/402 (11%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
++ ++L+ N DL + +VYK M + V+ D+ SY +L+ A C GN LA+++ +K
Sbjct: 194 HLLDALLKRNRLDLFW--DVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVL--LK 249
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E G L+V AL++K+ M G+ P+ +++ LI+
Sbjct: 250 TEEELGTATLNV----------------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQ 293
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV-ALGE 470
+E A L EM G ++ +IL+ ++ D A L + +
Sbjct: 294 KRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMY 353
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNF--VPNSH-YSSFDKRF------------------ 509
DY K K F P + Y+S + F
Sbjct: 354 DYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKK 413
Query: 510 -SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ + TY +K C+ D ++ EM G PN + +T LI
Sbjct: 414 RNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGD 473
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++LK MRE G++PD Y + I ++K++ +A S EM +P+ TY +
Sbjct: 474 AVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFIS 533
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G + + ++M + G N LI E+C+
Sbjct: 534 GYIEAGEFASADKYV---KEMLECGVIPNKVLCTGLINEYCK 572
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 18/247 (7%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +C + + K DL A + +D K P+ ++ T++D C D ++
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 756
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-----QKLGVMADMASYNIL 330
I+E + + FN+L+N + T ++ + K G D+ +YNI+
Sbjct: 757 IFE-TNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV-TYNIM 814
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C GN A+E++ H K L V TY++++ + V ++++
Sbjct: 815 IDYLCKEGNLEAAKELF----HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI 870
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-----LQAGCEPNSQCCNILLQACVE 445
+AG+ P+ I +S +INA G+ +A+ L ++M + GC+ + C LL +
Sbjct: 871 AAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAK 930
Query: 446 ACQFDRA 452
+ + A
Sbjct: 931 VGEMEVA 937
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 7/145 (4%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M GL P+ S+ +LID +E A +L M G+ D VAY+ I +
Sbjct: 267 LKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLL 326
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ + A L EM + + + Y + S+ G++ + + A++ M G
Sbjct: 327 KGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK---ALFDGMITFGVTP 383
Query: 655 NDTYLKELIEEWCEGVIQDKNQNQG 679
LI EG ++KN +G
Sbjct: 384 GARAYASLI----EGFFREKNVRKG 404
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 59/361 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+Y D++ N++ +N L+ + K ++ M G D SY ++ + C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E+ + + V Y+ ++ ++ A ++ +M+ G++
Sbjct: 228 EVGLVKEGRELAERFEPV---------VSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++S+LIN N+G +E A +ML+ GC PN + L++ C
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-----------F 327
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T + ++ + F +P
Sbjct: 328 LRGTTFDALDL-----------------------------------WNQMIRGFGLQPNV 352
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN L++ C+ VKA + + M +G SPN ++ LI+ G+++GA+ I
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G P+VV YT ++ R + K+A SL E M P++ T+ ++ G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 634 L 634
L
Sbjct: 473 L 473
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + + ++ + ++ N+ +++L+NV N+ ++ M K G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C L G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN A G ++ A++++ +ML +GC PN +++A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 432 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +++TYN L+ C AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A Q+L ++ PDV++YT I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
RS + L E M I P++ T+ L+
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 62/316 (19%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E++ +K +K+ Y+ ++ QM V DM G PN T++
Sbjct: 130 AVEMFYRIKEFGCDPSVKI----YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 185
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
L+ A V+ A L EM GC P++ ++ + E L
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV-------------GLV 232
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K L E ++ P + YN L+
Sbjct: 233 KEGRELAERFE---------------------------------------PVVSVYNALI 253
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C DY LM EM G+SPN IS++ LI+ SG +E A L M + G
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
P++ ++ +K C A L+ +M + + +QPN+V Y TL++ +G+ + +
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN---IVK 370
Query: 640 CLAVYQDMWKAGYKAN 655
++V+ M + G N
Sbjct: 371 AVSVFSHMEEIGCSPN 386
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 123/318 (38%), Gaps = 39/318 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
PN+ T++ G C G+ +K+ +++ + + NI + SL+N A L +
Sbjct: 350 PNVVAYNTLVQ--GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 463
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRIS 480
E +S N LL A A +L ++ + L G +R +
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
M D S R ++P +Y ++ C R L+
Sbjct: 584 QM--LDLVSC----------------GRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 539 MRTVGLSPNHISWTILID 556
M + G+ P+ +W++LI+
Sbjct: 626 MISAGIVPSIATWSVLIN 643
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + F K+ L A+ ++ PN+ + +++ + ++ ++ E +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+N ++ FN+ + +A L + +V++ M Q+ ++ +YN LL A
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E YG + + +GV + TY+T++ +A +AL++ M+ G +P+ IT
Sbjct: 510 ---EEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 401 WSSLINACANAGLVEQAMHLFE 422
+ +I A G E+A + +
Sbjct: 566 MNMIILAYCKQGKAERAAQMLD 587
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
FK T T+ ++++ D V+ L+ +M+ G + + +I G E A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ ++E G P V Y + + R++ + ++ +MK +PN+ TY LL+A
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ + ++ L +M G + +I CE G++++ +
Sbjct: 192 CKNNKVDGAKKLLV---EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
++H PN+ ++D ++ + ++ + V + +N+L++ NA
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L++ M G D + N+++ A C G A ++ V K + DV +
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK--WRPDVIS 602
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y+ ++ + + + + E M+SAG+ P+ TWS LIN
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 190/436 (43%), Gaps = 47/436 (10%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++ + +I V+NSL+ + L+V M + G
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 393
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLP-DVFTFNTLIDGYCKRLKLDSA 449
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M G+ P+TIT++S++N AG V + F+EM+ GC PN NIL++
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 509
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH 501
+ + + A ++ + +Q L H D S T F N
Sbjct: 510 FCRSNKMEEASKVI----VKMSQEGL---------------HPDAVSFNTLIYGFCRNGD 550
Query: 502 ----YSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y F K + T T+N L+ A + + + + +EM + G + ++ +
Sbjct: 551 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 610
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID + NV+ A L M + G P + + I + R+ QA + M
Sbjct: 611 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 670
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ- 672
+ P +V T+L A + E+ + +D+ K G+ + TY E++ E + I
Sbjct: 671 VVPEVVD--TILNADKK-----EIAAPKILVEDLMKKGHISYPTY--EVLHEGVQSTIYC 721
Query: 673 -DKNQNQGEVTLCRRT 687
+ + + CR+T
Sbjct: 722 LEYGKQRASDPKCRKT 737
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 219/511 (42%), Gaps = 43/511 (8%)
Query: 195 FRIVQLCVN-KPDVNLAIRYACIVP-RADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
R+ C+ +P ++A+R +P R + +C V A + +D
Sbjct: 125 IRLRSFCLTARP--HIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV 182
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
PN+ ++ GD +++ + + + +++N++ +N + A L +
Sbjct: 183 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 242
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ V D+ +YN L++ C + QE ++ + +G L D FTY+TI+
Sbjct: 243 LVDGMRAYAV-PDVVTYNTLIRGLC---KKSMPQEAMHYLRRMMNQGCLP-DDFTYNTII 297
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q A ++ +D + G P+ +T+ SLIN G VE+A+ LF E G +
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357
Query: 431 PNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQ 488
P+ N L++ C++ A ++ + + Y+ + + M + D
Sbjct: 358 PDIVVYNSLVKGLCLQGLIL-HALQVMNEMAEEGCHPDI-QTYNIVINGLCKMGNISDAT 415
Query: 489 SITNT-------PN-FVPNSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
+ N P+ F N+ + KR + P T TYN ++
Sbjct: 416 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 475
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C V EM G PN I++ ILI+ S +E A +++ M ++G+ PD
Sbjct: 476 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 535
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V++ T I R+ L+ A+ LF++++ T+ TL+ A S ++H ++ +
Sbjct: 536 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK---I 592
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ +M G++A+ + LI+ C+ D+
Sbjct: 593 FDEMLSKGHRADSYTYRVLIDGSCKTANVDR 623
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 141/386 (36%), Gaps = 80/386 (20%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L++ HD +VY M GV D+ ++ I L++ CL +A + + H
Sbjct: 91 IMDALVDAAYHDQAH--KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH 148
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
A Y T+V A ++ + ML V PN ++ +++A G
Sbjct: 149 RGA--------VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 200
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A L +++Q G N NI ++ EA + A RL
Sbjct: 201 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV---------------- 244
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
DG R P TYN L++ C
Sbjct: 245 DG--------------------------------MRAYAVPDVVTYNTLIRGLCKKSMPQ 272
Query: 533 KAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+A+ + M G P+ ++ +ID V+ A ++LK G PD V Y + I
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHEVQQCLAVYQDMWK 649
+++A LF E + I+P++V Y +L++ G LH +Q
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ----------- 381
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKN 675
+ E+ EE C IQ N
Sbjct: 382 --------VMNEMAEEGCHPDIQTYN 399
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ P YN +M A Y +A + M G+SP+ + TI + + +
Sbjct: 79 FACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHI 138
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L+ + G VAY T + A LF++M H + PNL + +L
Sbjct: 139 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 194
Query: 627 ARSRYGSLHE 636
A + G + E
Sbjct: 195 ALCKRGDVLE 204
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 43/414 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMA 322
G K+ A+ ++ ++ + + +N++++ A +KF M+ +G++
Sbjct: 322 GFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA-----EMRAMGLLP 376
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN LL C AGN A + G+++ + L V TY+T++ + A
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLR----RAGLAPTVLTYNTLIDGYCRLGDLAEA 432
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++KE+M+ G P+ T++ L+N + A F+EML G +P+ N + A
Sbjct: 433 RRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICA 492
Query: 443 CVEACQFDRAFRLFRSWTLS---KTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
+ AF+L L V DG T + + + + +++
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD----- 547
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
+P TY L+ A C + L+N M + GL P+ +++TIL+
Sbjct: 548 ------------GLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
C GN+ A + M + G+ P+ + Y I + R AF F EM +
Sbjct: 596 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
PN TY L+ R G+ + + +Y +M + G + L + + EG
Sbjct: 656 PNKYTYTLLIDGNCREGNWADA---IRLYFEMHQNGIPPDYCTHNALFKGFDEG 706
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 150/376 (39%), Gaps = 59/376 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL ++ +P + T+ID G C GD ++R +
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID--GYCRLGDLAEARRLK 436
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ Q ++ + LMN + +L E + M G+ D +YN + A
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+T +A ++ EV L KG+ D TY+ I+ + A ++K M+S G+ P+
Sbjct: 497 SSTPMAFQLR-EVMML--KGIYP-DTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A GL+ +A L M+ G +P+ IL+ C A+ FR
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+P T
Sbjct: 613 KML-----------------------------------------------DVGIEPNEIT 625
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ A C A +EM GL+PN ++T+LID GN A+++ M
Sbjct: 626 YNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMH 685
Query: 576 EDGMSPDVVAYTTAIK 591
++G+ PD + K
Sbjct: 686 QNGIPPDYCTHNALFK 701
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 195/514 (37%), Gaps = 105/514 (20%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN- 299
L A+ H +P++ C ++ V + RA+Y ++ V I +N+L++
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246
Query: 300 -----------------------VNAHDLKFTLEV--------------YKNMQKLGVMA 322
+ +D+ F + + + +L A
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--------A 374
+YN L+ A G A+ + E +E +G++ V TY+ I+ A
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQME---MENEGIMP-TVVTYNAIIHGLLKCEQAEAA 362
Query: 375 DAKWWQM---------------------------ALKVKEDMLSAGVTPNTITWSSLINA 407
K+ +M AL + D+ AG+ P +T+++LI+
Sbjct: 363 QVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDG 422
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A L EEM++ GC P+ IL+ + A R F LSK
Sbjct: 423 YCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMA-REFFDEMLSK---G 478
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR-----FSFKPTTTTYNILM 522
L D RI + ++++TP +F R P T TYN+++
Sbjct: 479 LQPDCFAYNTRICA-----ELTLSSTP--------MAFQLREVMMLKGIYPDTVTYNVII 525
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + K L +M + GL P+ I++T LI A G + A ++L M DG+
Sbjct: 526 DGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQ 585
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P VV YT + C R L A+ F +M I+PN +TY L+ A G
Sbjct: 586 PSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTG---RTPLA 642
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
+ +M + G N LI+ C EG D
Sbjct: 643 FRHFHEMLERGLAPNKYTYTLLIDGNCREGNWAD 676
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 190/436 (43%), Gaps = 47/436 (10%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++ + +I V+NSL+ + L+V M + G
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 394
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLP-DVFTFNTLIDGYCKRLKLDSA 450
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M G+ P+TIT++S++N AG V + F+EM+ GC PN NIL++
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 510
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH 501
+ + + A ++ + +Q L H D S T F N
Sbjct: 511 FCRSNKMEEASKVI----VKMSQEGL---------------HPDAVSFNTLIYGFCRNGD 551
Query: 502 ----YSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y F K + T T+N L+ A + + + + +EM + G + ++ +
Sbjct: 552 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 611
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID + NV+ A L M + G P + + I + R+ QA + M
Sbjct: 612 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 671
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ- 672
+ P +V T+L A + E+ + +D+ K G+ + TY E++ E + I
Sbjct: 672 VVPEVVD--TILNADKK-----EIAAPKILVEDLMKKGHISYPTY--EVLHEGVQSTIYC 722
Query: 673 -DKNQNQGEVTLCRRT 687
+ + + CR+T
Sbjct: 723 LEYGKQRASDPKCRKT 738
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 219/511 (42%), Gaps = 43/511 (8%)
Query: 195 FRIVQLCVN-KPDVNLAIRYACIVP-RADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
R+ C+ +P ++A+R +P R + +C V A + +D
Sbjct: 126 IRLRSFCLTARP--HIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV 183
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
PN+ ++ GD +++ + + + +++N++ +N + A L +
Sbjct: 184 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 243
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ V D+ +YN L++ C + QE ++ + +G L D FTY+TI+
Sbjct: 244 LVDGMRAYAV-PDVVTYNTLIRGLC---KKSMPQEAMHYLRRMMNQGCLP-DDFTYNTII 298
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q A ++ +D + G P+ +T+ SLIN G VE+A+ LF E G +
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358
Query: 431 PNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQ 488
P+ N L++ C++ A ++ + + Y+ + + M + D
Sbjct: 359 PDIVVYNSLVKGLCLQGLIL-HALQVMNEMAEEGCHPDI-QTYNIVINGLCKMGNISDAT 416
Query: 489 SITNT-------PN-FVPNSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
+ N P+ F N+ + KR + P T TYN ++
Sbjct: 417 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 476
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C V EM G PN I++ ILI+ S +E A +++ M ++G+ PD
Sbjct: 477 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 536
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V++ T I R+ L+ A+ LF++++ T+ TL+ A S ++H ++ +
Sbjct: 537 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK---I 593
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
+ +M G++A+ + LI+ C+ D+
Sbjct: 594 FDEMLSKGHRADSYTYRVLIDGSCKTANVDR 624
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 141/386 (36%), Gaps = 80/386 (20%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L++ HD +VY M GV D+ ++ I L++ CL +A + + H
Sbjct: 92 IMDALVDAAYHDQAH--KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH 149
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
A Y T+V A ++ + ML V PN ++ +++A G
Sbjct: 150 RGA--------VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 201
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A L +++Q G N NI ++ EA + A RL
Sbjct: 202 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV---------------- 245
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
DG R P TYN L++ C
Sbjct: 246 DG--------------------------------MRAYAVPDVVTYNTLIRGLCKKSMPQ 273
Query: 533 KAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+A+ + M G P+ ++ +ID V+ A ++LK G PD V Y + I
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHEVQQCLAVYQDMWK 649
+++A LF E + I+P++V Y +L++ G LH +Q
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ----------- 382
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKN 675
+ E+ EE C IQ N
Sbjct: 383 --------VMNEMAEEGCHPDIQTYN 400
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ P YN +M A Y +A + M G+SP+ + TI + + +
Sbjct: 80 FACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHI 139
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L+ + G VAY T + A LF++M H + PNL + +L
Sbjct: 140 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 195
Query: 627 ARSRYGSLHE 636
A + G + E
Sbjct: 196 ALCKRGDVLE 205
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 218 PRADILFCNFVREFGK-KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P D + +R G+ KRD + L +D ++ +P+ +ID+ G +
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATL-LFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKAC 334
+ + + +N+ + Y NSL+ + + L E+++ M+K GV + S+N +L C
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCC 234
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG LA + E +EA+G+ K + T++T++ AK+ A KV ++M SAG+
Sbjct: 235 GKAGKVGLAYQFMDE---MEARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ T++ +I A A AG + +A +F +M +AGC N N+L+ A V+A ++ A
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Query: 455 LF 456
++
Sbjct: 351 IY 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 170/414 (41%), Gaps = 62/414 (14%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY----- 272
R +L N + +G+ + + + KH S PN Y + +I G+
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ + I L + N+ V + L N D +++ +M+ +G AD +Y IL++
Sbjct: 71 LLDKMIKTGLEPDTLLCNV-VLDGLGKANMMDE--ACKLFASMKSMGCPADDYTYAILIR 127
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ G +E +E +G Y+ ++ ++ A + A+ V + ML
Sbjct: 128 S---LGRCKRDEEATLLFDEMEERGCTP-SAPAYTNVIDIYCKAGRIESAMVVLKKMLDK 183
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ P+ T +SLI A + G E A +FE M ++G N+ N +L C +A + A
Sbjct: 184 NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLA 243
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + ME + K
Sbjct: 244 YQF-----------------------MDEMEAR------------------------GIK 256
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + T+N L+ Y +A ++ EMR+ GL+P+ ++T +I+A +GN+ A ++
Sbjct: 257 PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEM 316
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
M + G S +VV Y I V++ R + A ++ +MK I P+ +T L
Sbjct: 317 FGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++L N Y + ++ V A ++ +E+ M K G+ D N++L
Sbjct: 37 FQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGK 96
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A +++ +K + D +TY+ +++ K + A + ++M G TP
Sbjct: 97 ANMMDEACKLFASMKSMGCPA----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTP 152
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I+ AG +E AM + ++ML P+ N L+ A + + A +F
Sbjct: 153 SAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIF 212
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ K+ VA+ T
Sbjct: 213 ER--MKKSGVAV---------------------------------------------NTV 225
Query: 517 TYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
++N ++ CC +V M+EM G+ PN I++ LI+ G + A ++L+
Sbjct: 226 SFNAMLD-CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR G++PDV YT I+ ++ + +AF +F +M+ N+VTY L+ A + G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y DM K G
Sbjct: 345 YQDARD---IYFDMKKKG 359
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 38/293 (12%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+ +I + AG V AM L ++M++ G EP++ CN++L +A D A
Sbjct: 44 GSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEA 103
Query: 453 FRLFRSWTLSKTQVALGEDYD--------GNTDR-------ISNMEHK----DKQSITNT 493
+LF S K+ +DY G R ME + + TN
Sbjct: 104 CKLFASM---KSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNV 160
Query: 494 PN-FVPNSHYSS--------FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ + S DK + P T N L+ A A + M+
Sbjct: 161 IDIYCKAGRIESAMVVLKKMLDKNLA--PDDYTLNSLITAVSRTGRTELACEIFERMKKS 218
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G++ N +S+ ++D CG +G V A Q + M G+ P+ + + T I R+K +A
Sbjct: 219 GVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEA 278
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + +EM+ + P++ TY ++ A ++ G++ + ++ DM KAG AN
Sbjct: 279 YKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA---FEMFGDMEKAGCSAN 328
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 155/400 (38%), Gaps = 71/400 (17%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+EF+ + +KP+ A Y C++ + K ++V A+ D K
Sbjct: 35 DEFQELDKHGSKPN---AYTYKCVI-----------QSLVKAGNVVLAMELLDKMIKTGL 80
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTL 309
P+ +C ++D G ++ ++ ++S + Y + L+ D + TL
Sbjct: 81 EPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATL 140
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G +Y ++ C AG A + +K + K L D +T +++
Sbjct: 141 -LFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVV---LKKMLDKN-LAPDDYTLNSL 195
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + ++A ++ E M +GV NT++++++++ C AG V A +EM G
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGI 255
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PNS N L+ A A+++ +
Sbjct: 256 KPNSITFNTLINCLGRAKYASEAYKVLQEM------------------------------ 285
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ P TY +++A KA + +M G S N
Sbjct: 286 -----------------RSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSAN 328
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+++ +LIDA +G + A I M++ G+ PD + T
Sbjct: 329 VVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+ DK S KP TY ++++ V A L+++M GL P+ + +++D
Sbjct: 36 EFQELDKHGS-KPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGL 94
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + ++ A ++ M+ G D Y I+ R KR ++A LF+EM+ P+
Sbjct: 95 GKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSA 154
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
Y ++ + G ++ + V + M +D L LI
Sbjct: 155 PAYTNVIDIYCKAG---RIESAMVVLKKMLDKNLAPDDYTLNSLI 196
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M+++G + ++ ILI + G E A + M E G +P AYT I +
Sbjct: 106 LFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYC 165
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++ R++ A + ++M + P+ T +L+ A SR G + +++ M K+G
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTG---RTELACEIFERMKKSGVAV 222
Query: 655 NDTYLKELIE 664
N +++
Sbjct: 223 NTVSFNAMLD 232
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+ +M+E + + G PN ++ +I + +GNV A+++L M + G+ PD +
Sbjct: 29 RIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCN 88
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++ + +A LF MK + TY L+R+ G ++ ++ +M
Sbjct: 89 VVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRS---LGRCKRDEEATLLFDEM 145
Query: 648 WKAGYKANDTYLKELIEEWCEG 669
+ G + +I+ +C+
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKA 167
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ GRI+ + VLKK+ + +AP D L R +G E+ + E +++
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAP----DDYTLNSLITAVSR---TGRTELACEIFERMKKS 218
Query: 185 RLPVKELDEEFRIVQLCVNKPD-VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRA 243
+ V + F + C K V LA ++
Sbjct: 219 GVAVNTV--SFNAMLDCCGKAGKVGLAYQF------------------------------ 246
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
D + PN T+I+ G ++ + +++RS +T +++ + ++
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A ++ E++ +M+K G A++ +YN+L+ A AG A++IY ++K KG+L
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKK---KGILP- 362
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKE 387
D T + + ++ K ++L E
Sbjct: 363 DAITATVLQQLAGKCKLSGISLDENE 388
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 206/482 (42%), Gaps = 53/482 (10%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N V KK ++ SA + KK +P++++ +I+ G ++ +++ ++ +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ L L M ++G+ A + Y+ L+ C G A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ E + A G LK +V Y++++ + A ++ +M G++PNT T+++
Sbjct: 445 KSLFDE---MIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ +A + +A LF EM++ PN N+L++ + RAF L + K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE-MVEK 559
Query: 464 TQVALGEDYDG------NTDRIS------NMEHKDKQSITNTPNFVPN-SHYSSF----- 505
V Y +T R+S N ++Q + +PN Y++
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619
Query: 506 -----DK---------RFSFKPTTTTYNILMKACCTDYYRV-----KAL-MNEMRTVGLS 545
DK + P TY AC DY KA+ ++++ G
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTY-----ACFLDYLTSEGNIEKAIQLHDVLLEGFL 674
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++ ILI G ++ A ++L M + G+SPD ++Y+T I R LK+A L
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 734
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+E M + + P+ V Y L+ G E+ + + DM + G K N LI
Sbjct: 735 WESMLNRGVNPDTVAYNFLIYGCCVTG---ELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Query: 666 WC 667
C
Sbjct: 792 TC 793
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 163/379 (43%), Gaps = 46/379 (12%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S ++ + ++MAL + ++++S+G+ P+ +++++ + +A + M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 425 LQAGCEPNSQCCNILL------QACVEACQFDR--AFRLFRSWTLSKTQVALG----EDY 472
+GC+ + N+ + Q EA + +++ R+ + + LG E++
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 473 DGNTDRISNM-EHKDKQSITNTPNFVPNSHY-----SSFD-----KRFSFKPTTTTYNIL 521
+ + ++ M E S N V S+FD K+F P+ YN L
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C D ++L N M GL PN ++++ILID+ G ++ AL L M E G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V Y++ I + +L+ A SLF+EM ++PN+V Y +L+ + G LH
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA-- 479
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE-----------GVIQDKNQNQGEVTL----- 683
+Y +M G N LI C G + + N EVT
Sbjct: 480 -FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 684 --CRRTNSQRPQSLLLEKV 700
C+ N+ R LL E V
Sbjct: 539 GHCKEGNTVRAFELLDEMV 557
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 165/405 (40%), Gaps = 45/405 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ S + ++YV+ +++ D EV M+ G +A+YN+ ++ C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N + + + E+K+L + L+ DV TY T+V + ++ ++ +M+ G
Sbjct: 262 --KNQRVWEAV--EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ S+L++ G + A L ++ + G P+ N L+ + + + D A L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
F +NM HK T + + +S H+
Sbjct: 378 F-----------------------NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K T Y+ L+ C K+L +EM GL PN + +T LI G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A ++ M G+SP+ +T I + R+ +A LF EM + + PN VTY
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ + G+ + + +M + G + + LI C
Sbjct: 535 VLIEGHCKEGN---TVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 120/564 (21%), Positives = 221/564 (39%), Gaps = 140/564 (24%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + + KDG+L+E ES+ + G+ F + ++ ++ K G++D +
Sbjct: 358 YNALINSMCKDGKLDE----AESLFNNMGHKGLFPNDVTYSILIDSFCK---RGKLDVAL 410
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
L K+ E+G+ S L+ C+ L + R K L +
Sbjct: 411 HFLGKMTEVGIKATVYPYSS---LISGHCK-----------------LGKLR-AAKSLFD 449
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
E L KP+V +++ + + + K+ +L +A R Y S
Sbjct: 450 EMIANGL---KPNV--------------VIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN Y +I G+C +A+ + +++
Sbjct: 493 PNTYTFTALIS--GLC-------------------------------HANRMAEANKLFG 519
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M + V+ + +YN+L++ C GNTV A E+ E + KG++ D +TY ++
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE---MVEKGLVP-DTYTYRPLISGL 575
Query: 374 ------ADAKWWQMALKVKEDMLS--AGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++A+ + L+ ++ L+ G PN +T+++LIN GL+++A L EML
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ PN L ++A +L L E + N
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQL---------HDVLLEGFLAN---------- 676
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
T TYNIL++ C ++ M G
Sbjct: 677 -----------------------------TVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+SP+ IS++ +I G+++ A+++ + M G++PD VAY I C + L +AF
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
L ++M ++PN TY +L+
Sbjct: 768 ELRDDMMRRGVKPNRATYNSLIHG 791
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 192/454 (42%), Gaps = 51/454 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I + ++R E++ ++N+T N+ + L++ + + +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K V +YN L+ C A A E Y ++ + G + D+FTY+T++
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAER---ASEAYDLLEEMVYSGCIP-DIFTYTTLIT 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CE 430
F +K AL+V E +++ G P+ +T+S LI+ G +++A+ LF M+++G C
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNTDR 478
PN+ N L+ + D A L + T L + D D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 479 ISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTTTYNILM 522
++ M K TP+ V + H +R S PT TYN ++
Sbjct: 279 LNQMTRKGL-----TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + + PN +S+ I+I A+++++ R +PD
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEV---- 637
VV YTT I R K++ +A ++ +M + PN +TY TL+ G L
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI 453
Query: 638 -QQC---LAVYQDMWKAGYKAN-DTYLKELIEEW 666
+ C + Y + A KAN D +EL+++
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 135/364 (37%), Gaps = 59/364 (16%)
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
AD +Y L++ C A G+ + +KG DV+TY+ ++
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGK---MVSKG-FHPDVYTYTAVIHALCVENRLHE 64
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A K E+M + +TPN +T++ LI+ G V++A+ L +M + C P + N L+
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + A+ L Y G
Sbjct: 124 GLCKAERASEAYDLLEEMV-----------YSGCI------------------------- 147
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
P TY L+ C AL ++ G P+ ++++ LID
Sbjct: 148 -----------PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 560 GSGNVEGALQILKIMREDGMS-PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A+ + M + G P+ V Y + I R ++ +A +L E M P++
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQN 677
VTY TL+ + L + L M + G + L++ C E + D
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLL---NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 678 QGEV 681
GE+
Sbjct: 314 LGEM 317
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 164/424 (38%), Gaps = 73/424 (17%)
Query: 240 ALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
A AYD ++ + S P+++ T+I G C A ++E L ++ ++ +
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLIT--GFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L++ LK ++++ M K G M + +YN L+ C G A + +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ DV TY+T++ F A + M G+TP+ +T++SL++
Sbjct: 249 ETGSSP----DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+H+ EM + C P N +L A Q + A R + L +
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCP---- 356
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
P ++NI+++ C
Sbjct: 357 -----------------------------------------PNVVSFNIMIRGLCKVNRS 375
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTT 588
+A L+ E R +P+ + +T +ID V+ A ++ K++ E G P+ + Y+T
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + L +A E+ PN+ TY L+ A + + ++ L DM
Sbjct: 436 LITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL---DDMV 488
Query: 649 KAGY 652
+ G+
Sbjct: 489 QRGF 492
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S + +++T LI +E AL L M G PDV YT I RL +A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
EEM + + PN+VTY L+ + G + E +A+ M K TY LI
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA---VALLSKMRKKCVPTAVTY-NSLIS 123
Query: 665 EWCEG 669
C+
Sbjct: 124 GLCKA 128
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 137/362 (37%), Gaps = 65/362 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y+ + L K+GRL+E A+ + ++ G S + ++ + SG R G++D +
Sbjct: 188 YSCLIDGLCKEGRLKE-AIDLFGRMIKSG--SCMPNTVTYNSLISGFC---RMGKMDEAM 241
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
+L+++ E G +P +V + LM + LD+
Sbjct: 242 NLLERMAETGSSP-----------------------DVVTYTTLMNGF----CKLARLDD 274
Query: 194 EFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
+ ++ K PDV + F + + ++ L A+ ++
Sbjct: 275 AYDLLNQMTRKGLTPDV--------------VTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNAHDLK 306
SP +Y TI+D G C A L + N+ FN L VN
Sbjct: 321 SCSPTVYTYNTILD--GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRS--S 376
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + ++ D+ Y ++ C A +Y K LE G L + TY
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR--KMLEEPGCLP-NSITY 433
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST++ +A A + G PN T++ LI+A A E A L ++M+Q
Sbjct: 434 STLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Query: 427 AG 428
G
Sbjct: 490 RG 491
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 179/413 (43%), Gaps = 60/413 (14%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNI 291
+R + + Y+ K L + T I + G+C G +++ I+E++++Q + N+
Sbjct: 38 RRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNV 97
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
++SL++ A L+ + ++ M GV ++ +N+L+ C G + A+++
Sbjct: 98 ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL--- 154
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +G++ LD+ TY++++ F A K+ M S G N I+++ LIN
Sbjct: 155 LEVTIQRGII-LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
VE+AM+L+ EM Q G PN + + LL ++ + A +LF S V
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV--- 270
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+ Y I + C +
Sbjct: 271 --------------------------------------------DSCIYVIFLDGLCKNG 286
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ L NE+++ + S++ LID +G VE A + K + ++G+ P+VV
Sbjct: 287 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYGSLHEV 637
I R +++ +A LFE+M+ + P+++TY TLLR L EV
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 399
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 156/388 (40%), Gaps = 54/388 (13%)
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
TLNI N L N+N + L + + G + D+ +YN L+K C +A I
Sbjct: 12 TLNILA-NCLCNLNR--VSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI- 67
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
I+ A ++ E+M + G+ PN I++SSL++
Sbjct: 68 ---------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG +E++ LF EM+ G +PN N+L+ + + A +L T+ + +
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEV-TIQRGIIL 165
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT------TTYNIL 521
Y+ D F SS K F P+ +Y IL
Sbjct: 166 DLVTYNSLID-----------------GFCKIGDLSSARKLFLSMPSKGCEHNEISYTIL 208
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + +A L NEM VG PN +++ L+ +G V A ++ +M+ G+
Sbjct: 209 INGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGI 268
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
S D Y + ++ L +A LF E+K Y + + +Y L+ + G +V+
Sbjct: 269 SVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAG---KVEI 325
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWC 667
++ + + G + N +I +C
Sbjct: 326 AWEFFKQLSQEGLQPNVVTCNIMIHGFC 353
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 110/287 (38%), Gaps = 34/287 (11%)
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG++P+ T + L N N V + + +L+ G P+ N L++ C+ R
Sbjct: 4 AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKG---LCRVHR 60
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRFS 510
VA DG E K+ +PN YSS F
Sbjct: 61 ------------ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF- 107
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
C K L NEM G+ PN + + +LID G V A ++
Sbjct: 108 -------------CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L++ + G+ D+V Y + I + L A LF M + N ++Y L+
Sbjct: 155 LEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILING--- 211
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWCEGVIQDKNQ 676
Y + +V++ + +Y +M + G + N TY L G + D N+
Sbjct: 212 YCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 258
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 42/279 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P I + + V F L + R ++ PN+ +ID+ G +++
Sbjct: 93 MIPNV-ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEA 151
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + E + + L++ +NSL++ DL +++ +M G + SY IL+
Sbjct: 152 KKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILING 211
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A +Y E+ + + +V TYST++ A K+ M ++G
Sbjct: 212 YCKIWKVEEAMNLYNEMPQVGKRP----NVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 267
Query: 394 VTPNTI-----------------------------------TWSSLINACANAGLVEQAM 418
++ ++ ++S LI+ AG VE A
Sbjct: 268 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 327
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
F+++ Q G +PN CNI++ Q D+A LF
Sbjct: 328 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFE 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 539 MRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M GLSP+ + IL + C + EG + I+R G PD+V Y T IK R
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRR-GYIPDIVTYNTLIKGLCRVH 59
Query: 598 RLK-----------------QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
R+ +A +FEEMK + PN+++Y +L+ G L E ++
Sbjct: 60 RISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR- 118
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +M G + N LI+ C+
Sbjct: 119 --LFNEMVDQGVQPNLVQFNVLIDILCK 144
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+E++ ++ D SY+ L+ C AG +A E + K L +G L+ +V T +
Sbjct: 291 AMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF---KQLSQEG-LQPNVVTCN 346
Query: 368 TIVKVFADAKWWQMA---LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ F + A + E M G TP+ IT+++L+ + +E+ ++L +M
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406
Query: 425 LQ 426
+
Sbjct: 407 FK 408
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 192/480 (40%), Gaps = 86/480 (17%)
Query: 219 RADILFCNFVREFGKKR---DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
RA L + GK R +L LR+ + ++Y I +C D ++
Sbjct: 28 RAVALLLKDLSRLGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISLCIYSQDVDRA 87
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++R +N+ N++ F +LMNV L LE+Y NM+ M ++ +YN L+
Sbjct: 88 MELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDV 147
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G A + +K + VL+ TY+T++ + AL V + +LS G
Sbjct: 148 YGKLGRWERAIHVLDLMKQEGVEPVLR----TYNTLIIACNMCNQPREALAVYQRLLSDG 203
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
TPN+ T+++LI+A + +A+ +++EML+ E + + L+ AC +A Q++ A
Sbjct: 204 YTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETAL 263
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+F N +D N VPN
Sbjct: 264 RIF------------------------NEMQQD--------NCVPN-------------- 277
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TYN L+ AC + + + +M G +P+ +++T LI A G + ALQ
Sbjct: 278 -TVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAF 336
Query: 572 KIMREDGMSPDVVAYTTAIK------VCVRSKRLKQAFSLFEEMKHYQIQP--------- 616
M G PD + Y I + R Q F + H++ +P
Sbjct: 337 GKMCMQGCKPDAIVYNAIIDTLWETGIIWAQGRALQLFLTAVQQGHFRQEPVVRRAGRVE 396
Query: 617 -NLVTYITLLRARSRYGSLHEVQ------------QCLAVYQDMWKAGYKANDTYLKELI 663
NL + Y L E++ Q LA+ DM KA + + +KE +
Sbjct: 397 VNLHAMTAGVAMVCLYCWLLEIKRIAAEKGLAGLPQTLAIVTDMGKASREQGNCIVKEAV 456
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 57/354 (16%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D+ SY + C + + A E+ E++ ++ +V T++ ++ V
Sbjct: 65 LCDVYSYTATISLCIYSQDVDRAMELMNEMRQRN----IERNVHTFTALMNVCIKCGKLP 120
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+AL++ +M +A PN +T+++L++ G E+A+H+ + M Q G EP + N L+
Sbjct: 121 LALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLI 180
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AC NM ++ ++++ + +
Sbjct: 181 IAC-------------------------------------NMCNQPREALAVYQRLLSDG 203
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
+ P +TTYN L+ A KAL EM + + I+++ LI AC
Sbjct: 204 ----------YTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISAC 253
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G E AL+I M++D P+ V Y + + C + + ++A +FE+M + P++
Sbjct: 254 EKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDV 313
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVI 671
VTY L+ A R G + Q+ L + M G K + +I+ W G+I
Sbjct: 314 VTYTALISAYERGG---QWQKALQAFGKMCMQGCKPDAIVYNAIIDTLWETGII 364
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 17/335 (5%)
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRL-LDSGEVEMFVGLMEVLEEFRLPVKEL 191
+G ++L E+ L D LL + RL D +E+F L E R P+++L
Sbjct: 8 LGQNEELPEVIFRALHHVDSRAVALLLKDLSRLGKDRRAMELFDWLRSANE--RSPLRQL 65
Query: 192 DEEFR---IVQLCVNKPDVNLAIRYACIVPRADI-----LFCNFVREFGKKRDLVSALRA 243
+ + + LC+ DV+ A+ + + +I F + K L AL
Sbjct: 66 CDVYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEI 125
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
Y+ + PN+ T++DV G G + ++ + + ++ + V + +N+L+
Sbjct: 126 YNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNM 185
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ + L VY+ + G + +YN L+ A A E+Y E+ + ++
Sbjct: 186 CNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEM----LRQNMER 241
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
V TYS+++ A W+ AL++ +M PNT+T++SL+ ACA G E+A +F
Sbjct: 242 SVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVF 301
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M GC P+ L+ A Q+ +A + F
Sbjct: 302 EQMTAHGCTPDVVTYTALISAYERGGQWQKALQAF 336
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 10/251 (3%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R A +P + + V +GK A+ D K+ P + T+I C +C
Sbjct: 129 MRAANCMPNV-VTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCN 187
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
++ A+Y+ L S T N +N+L++ ++ LEVY+ M + + + +Y+
Sbjct: 188 QPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYS 247
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ AC AG A I+ E++ + TY+++V A W+ A +V E
Sbjct: 248 SLISACEKAGQWETALRIFNEMQQDNCVP----NTVTYNSLVTACAQGGQWEKATEVFEQ 303
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + G TP+ +T+++LI+A G ++A+ F +M GC+P++ N ++ E
Sbjct: 304 MTAHGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVYNAIIDTLWETGI 363
Query: 449 F---DRAFRLF 456
RA +LF
Sbjct: 364 IWAQGRALQLF 374
>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01740-like [Cucumis sativus]
gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01740-like [Cucumis sativus]
Length = 585
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 192/488 (39%), Gaps = 95/488 (19%)
Query: 254 PNMYICRTIID--VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + C ++ + CG ++ ++ ++ L S+ T + FNS+++ + ++KF
Sbjct: 19 PTPFTCNKLLHSLINSGCG-HLSAKLLFHFL-SKGYTPHPSSFNSIISFFCRSGNVKFAE 76
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE--------------- 354
++ +M + G D+ SYN LL C + A + V+ E
Sbjct: 77 HIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNG 136
Query: 355 -AKGVLKLDVF---------------TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
AK +K + F TY T V +F +M ++ DM+ G+ PN
Sbjct: 137 FAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNL 196
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ +SSLI+ AG ++ A FE M + PN + L+ C + RA LF
Sbjct: 197 VVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEK 256
Query: 459 WTLSK--------TQVALGEDYDGNTD----RISNMEHKD-KQSITNTPNFVPNSH-YSS 504
+ T + G GN D I+ M +D K +T + H
Sbjct: 257 MLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGR 316
Query: 505 FDKRF-----------------------------SFKPTTTTYNILM-KACCTDYYRVKA 534
FDK + K Y IL+ K D + A
Sbjct: 317 FDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSA 376
Query: 535 LMNEMRTVGL-----------SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
LM+ + G + N I +T+ IDA GN++ A +++K M E G PD
Sbjct: 377 LMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDK 436
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
YT+ I + L +AF + + M ++P+L+TY +L+ + G + E +Q V
Sbjct: 437 FVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQ---V 493
Query: 644 YQDMWKAG 651
+ DM G
Sbjct: 494 FDDMLNKG 501
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 170/406 (41%), Gaps = 29/406 (7%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRA-IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKF 307
L+ P++ + + + G YMK+ A +Y L + +I + + +++ D+K
Sbjct: 122 LNRPDLVMFNILFN--GFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKM 179
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ +M K+G++ ++ ++ L+ C AG+ +A E + +K + + FTYS
Sbjct: 180 GNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRP----NEFTYS 235
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ + A + E MLSA + PN ++S+I+ G V+ A+ +M
Sbjct: 236 TLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDR 295
Query: 428 GCEPNSQCCNILLQACVEACQFDR---AFRLFRSWTLSKTQVALGEDYD-----GNTDRI 479
+ + +++ +FD+ A L ++ L D GN
Sbjct: 296 DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEA 355
Query: 480 SNME--------HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT--YNILMKACCTD- 528
N D +++ + + Y +R+ K Y + + A C +
Sbjct: 356 LNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEG 415
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ ++ EM G P+ +T I GN+ A + K M ++ + PD++ Y+
Sbjct: 416 NLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYS 475
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ I + +A +F++M + I P+ V+Y L+R G+
Sbjct: 476 SLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 148/381 (38%), Gaps = 63/381 (16%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP ++F + + + K L A ++ K+ PN + T+ID C G ++
Sbjct: 192 IVPNL-VVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARA 250
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++E + S ++ N V+ S+ ++ H K G + D Y
Sbjct: 251 DSLFEKMLSASILPNCTVYTSI--IDGH------------FKKGNVDDAIKYI------- 289
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N + ++I KLD+ Y+ I+ F + +++ E + G+
Sbjct: 290 ---NQMFDRDI-------------KLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLL 333
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ I +++++ AG +++A++ ++ +L G E + + L+ + A R
Sbjct: 334 PDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRY 393
Query: 456 FRSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + D +GN D M + ++ F
Sbjct: 394 LVKENANEILYTVFIDALCKEGNLDDAEKMIKEMSEA--------------------GFV 433
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSGNVEGALQI 570
P Y + C +KA M + R V + P+ ++++ LI G + A Q+
Sbjct: 434 PDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQV 493
Query: 571 LKIMREDGMSPDVVAYTTAIK 591
M G++PD V+Y I+
Sbjct: 494 FDDMLNKGITPDFVSYDILIR 514
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 24/354 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 22 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 78
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 79 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNV 138
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 139 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 187
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 188 ---LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P + T+ TL+ A R G L ++C V +M + G K N ++ +C+
Sbjct: 305 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 110 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS--GLCRAGRMGETSALLDEMASQKMVPD 167
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 168 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 225
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 226 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 284 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 343
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 344 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 386
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L+E++
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY-- 504
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 505 -LYQKMMQ 511
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 176
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 177 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 297 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 330
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 390
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 436
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 267
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 326
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 387 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 443
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 444 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 500
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 501 EMEYLYQKMMQNNVVPSNAIHNIMVEA 527
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSK 597
+ + G P+ +W + AC +G++ A+ +L+ M DG P+ +Y I R+
Sbjct: 18 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R A +F+EM + PN +TY T++ + G L
Sbjct: 78 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 114
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 216/509 (42%), Gaps = 75/509 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ K+ SP + I+DV G G + K + E++RS+ + + + ++++
Sbjct: 236 AINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVL 295
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A + L+ + + ++ G +YN LL+ AG A + E++
Sbjct: 296 SACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCP 355
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D TY+ +V +A A + + A V E M GV PN IT++++I+A AG ++
Sbjct: 356 A----DSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDE 411
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSKTQVA 467
A+ LF M +AGC PN+ N +L + + + ++ F + T +A
Sbjct: 412 ALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILA 471
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSF 511
L + D+ N ++ +S P+ N+ S++ + R F
Sbjct: 472 LCG--NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 529
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN------ 563
TTYN L+ A D+ + ++++M++ G P S+++++ GN
Sbjct: 530 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 589
Query: 564 -----------------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ G+ + + ++ G PD+V + + + +
Sbjct: 590 IEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 649
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+ QA + + + + P+LVTY +L+ R G + ++ L + K+ K
Sbjct: 650 RNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE---KSQLKP 706
Query: 655 NDTYLKELIEEWC-EGVIQDKNQNQGEVT 682
+ +I+ +C +G++Q+ + E+T
Sbjct: 707 DLVSYNTVIKGFCRKGLMQEAVRMLSEMT 735
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 118/558 (21%), Positives = 217/558 (38%), Gaps = 144/558 (25%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 289 FTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 348
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E ++ + KGV+ + TY+T++ +
Sbjct: 349 MEENNCPADSVTYNELVAAYARAG---FSKEAAVVIEMMTQKGVMP-NAITYTTVIDAYG 404
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G PN
Sbjct: 405 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRA 464
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
TW++++ C N G+ + +F EM G EP+ N L+ A A +++
Sbjct: 465 TWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 524
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
T + +A D+ + IS+M+ K
Sbjct: 525 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK---------------------- 562
Query: 508 RFSFKPTTTTYNILMK--ACCTDYY---RVKALMNE---------MRTV----------- 542
FKPT T+Y+++++ A +Y R++ +NE +RT+
Sbjct: 563 --GFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALA 620
Query: 543 ------------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
G P+ + + ++ + + A IL+ + EDG++PD+V Y + +
Sbjct: 621 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLM 680
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE------------VQ 638
+ VR +A + + ++ Q++P+LV+Y T+++ R G + E ++
Sbjct: 681 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIR 740
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLE 698
C+ Y + + +GY A Y G I+D V C N RP L +
Sbjct: 741 PCIFTY-NTFVSGYTAMGMY----------GEIED-------VIECMAKNDCRPNELTFK 782
Query: 699 KVAVHLQKSAAENLAIDL 716
V ++ + A+D
Sbjct: 783 MVVDGYCRAGKYSEAMDF 800
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 185/467 (39%), Gaps = 81/467 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P A I + + +GK AL+ + + K+ PN ++ + G KS
Sbjct: 389 VMPNA-ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLG-----KKS 442
Query: 276 RA-----IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYN 328
R+ + D++S N +N+++ + N KF V++ M+ G D ++N
Sbjct: 443 RSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 502
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ A G+ V A ++YGE+ + V TY+ ++ A W+ V D
Sbjct: 503 TLISAYGRCGSEVDASKMYGEM----TRAGFNACVTTYNALLNALARKGDWRSGENVISD 558
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA---CVE 445
M S G P ++S ++ A G + E + + P+ LL A C
Sbjct: 559 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRA 618
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+RAF LF
Sbjct: 619 LAGSERAFTLF------------------------------------------------- 629
Query: 506 DKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K+ +KP +N ++ + Y + + ++ + GL+P+ +++ L+D G
Sbjct: 630 -KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGE 688
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
A +ILK + + + PD+V+Y T IK R +++A + EM I+P + TY T
Sbjct: 689 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNT 748
Query: 624 LLR---ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ A YG + +V +C+A K + N+ K +++ +C
Sbjct: 749 FVSGYTAMGMYGEIEDVIECMA------KNDCRPNELTFKMVVDGYC 789
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 168/412 (40%), Gaps = 55/412 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQK 317
TI+ G Y K+ ++E ++ + + +N +++V + L V + M+
Sbjct: 222 TILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRS 281
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ D + + +L AC G A++ + E+K + TY+ +++VF A
Sbjct: 282 KGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCG----YEPGTVTYNALLQVFGKAG 337
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL V ++M +++T++ L+ A A AG ++A + E M Q G PN+
Sbjct: 338 VYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYT 397
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A +A + D A +LF S K+ + NT +
Sbjct: 398 TVIDAYGKAGKEDEALKLFYSM-------------------------KEAGCVPNTCTY- 431
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
N+ S K+ + N ++K C +M++ G PN +W ++
Sbjct: 432 -NAVLSMLGKK-------SRSNEMIKMLC-----------DMKSNGCFPNRATWNTILAL 472
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
CG G + ++ + M+ G PD + T I R A ++ EM
Sbjct: 473 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 532
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ TY LL A +R G + V DM G+K +T +++ + +G
Sbjct: 533 VTTYNALLNALARKGDWRSGEN---VISDMKSKGFKPTETSYSLMLQCYAKG 581
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 163/401 (40%), Gaps = 58/401 (14%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWW 379
M D+ +Y +L A G A ++ +K + L TY+ I+ VF + W
Sbjct: 214 MLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTL----VTYNVILDVFGKMGRSW 269
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L V E+M S G+ + T S++++ACA GL+ +A F E+ G EP + N L
Sbjct: 270 RKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNAL 329
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
LQ +A + A + + ME N P
Sbjct: 330 LQVFGKAGVYTEALSVLK-----------------------EMEE------NNCP----- 355
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTV-GLSPNHISWTILIDA 557
+ TYN L+ A + + A++ EM T G+ PN I++T +IDA
Sbjct: 356 -------------ADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDA 402
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +G + AL++ M+E G P+ Y + + + R + + +MK PN
Sbjct: 403 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPN 462
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
T+ T+L G V + V+++M G++ + LI + G D ++
Sbjct: 463 RATWNTILALCGNKGMDKFVNR---VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 519
Query: 677 NQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
GE+T + LL +A + EN+ D++
Sbjct: 520 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 560
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I +
Sbjct: 609 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQS 663
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 664 IHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKG- 722
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 723 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNEL 779
Query: 400 TWSSLINACANAGLVEQAM 418
T+ +++ AG +AM
Sbjct: 780 TFKMVVDGYCRAGKYSEAM 798
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P+ + RT++ C S + + ++ +FNS++++ + + +
Sbjct: 601 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 660
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++ + G+ D+ +YN L+ G A+EI +K LE K LK D+ +Y+T++K
Sbjct: 661 LQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEI---LKTLE-KSQLKPDLVSYNTVIK 716
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A+++ +M G+ P T+++ ++ G+ + + E M + C P
Sbjct: 717 GFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRP 776
Query: 432 NSQCCNILLQACVEACQFDRA 452
N +++ A ++ A
Sbjct: 777 NELTFKMVVDGYCRAGKYSEA 797
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
L +H IL+ G A ++L KI +D M DV AYTT + R+ + ++
Sbjct: 177 ALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYML-DVRAYTTILHAYSRTGKYEK 235
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A +LFE MK P LVTY +L + G ++ L V ++M G K D +
Sbjct: 236 AINLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKILGVLEEMRSKGLKF-DEFTCS 292
Query: 662 LIEEWC--EGVIQDKNQNQGEVTLC 684
+ C EG++++ E+ C
Sbjct: 293 TVLSACAREGLLREAKDFFAELKSC 317
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 61/337 (18%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D SY IL+ C G T A ++ K + DV YSTI+ K+
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQML-------RKTWVNADVVMYSTIIDSLCKGKF 162
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++ +M++ G+ PN T+S L++A +QAM+L M++ G +PN
Sbjct: 163 VTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGA 222
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ Q ++A +F V + E
Sbjct: 223 IMDGYCLVNQVNKALNIF--------NVMVQE---------------------------- 246
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
+P YNI++ C RV MN EM ++P+ +++ ILI
Sbjct: 247 -----------GVEPNVWCYNIIINGLCKKK-RVDEAMNLFKEMHWKKINPDVVTYNILI 294
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G + +L+++ MR G + D++ Y + + ++ L QA +L +E+K IQ
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
PN+ TY TL+ + G L + ++Q++ GY
Sbjct: 355 PNVCTYTTLIDGLCKDGRL---EDAYVIFQEILTEGY 388
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 165/364 (45%), Gaps = 35/364 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++K V AD+ Y+ ++ + C A +Y E + AKG+ +V+T+S +V
Sbjct: 138 LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSE---MIAKGIFP-NVYTFSILVDALC 193
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + A+ + M+ GV PN +T+ ++++ V +A+++F M+Q G EPN
Sbjct: 194 KDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVW 253
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRIS-NMEHKDK- 487
C NI++ + + D A LF+ K V DG +IS ++E D+
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+SI T + + TYN L+ A C +++ +A L+ E++ G+
Sbjct: 314 RSIGKTVDII-------------------TYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++T LID G +E A I + + +G V Y I + +A +L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ--CLAVYQDMWK-AGYKANDTYLKEL 662
M+ P+ V+Y T++ A S G + + C + + + K K N T + +L
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADL 474
Query: 663 IEEW 666
++W
Sbjct: 475 NDKW 478
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 145/347 (41%), Gaps = 30/347 (8%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ LE G+ K + T + ++ + + +L G PN+IT+++LI
Sbjct: 34 RQLEFNGI-KPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCL 92
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +A+ + ++ G + + IL+ + + A ++ R T V +
Sbjct: 93 NGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK-TWVNADVVM-- 149
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTD 528
Y D + + FV +++ YS + F P T++IL+ A C D
Sbjct: 150 -YSTIIDSLCKGK------------FVTDAYRLYSEMIAKGIF-PNVYTFSILVDALCKD 195
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A L+ M G+ PN +++ ++D V AL I +M ++G+ P+V Y
Sbjct: 196 RKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCY 255
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I + KR+ +A +LF+EM +I P++VTY L+ + G ++ L + +
Sbjct: 256 NIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG---KISTSLELVDE 312
Query: 647 MWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQ 693
M G + L+ C+ D+ +TL + Q Q
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQ-----AITLVKEIKDQGIQ 354
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ + PN++ C II + G+C A +++++ + + ++ +N L
Sbjct: 236 ALNIFNVMVQEGVEPNVW-CYNII-INGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ + +LE+ M+ +G D+ +YN LL A C N L Q I VK ++
Sbjct: 294 IDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALC--KNHHLDQAI-TLVKEIKD 350
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G+ + +V TY+T++ + A + +++L+ G T++ +IN GL +
Sbjct: 351 QGI-QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFD 409
Query: 416 QAMHLFEEMLQAGCEPNS 433
+A+ L M C P++
Sbjct: 410 EALALLSRMEDNACIPDA 427
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK+ + A+ + +P++ +ID G+C G S + +++RS T++
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILID--GLCKLGKISTSLELVDEMRSIGKTVD 321
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT----VLAQ 344
I +NSL++ H L + + K ++ G+ ++ +Y L+ C G V+ Q
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
EI E H+ V+TY+ ++ + AL + M P+ +++ ++
Sbjct: 382 EILTEGYHIT--------VWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETI 433
Query: 405 INACANAGLVEQAMHLFEEMLQAG 428
I A + G + L M+ G
Sbjct: 434 IYALSEKGETVKTNKLLCAMIVRG 457
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 147 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 260
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 377
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 378 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK P+ TY TL+RA R G
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 155 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 209
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 210 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 324
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 325 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 381
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 382 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 494
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ T S+++ + K A+ + + M+ G P+TIT+++LI+ +A+ L +
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M+Q GC+PN +++ + D AF L +K + + ++ D +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV-VIFNTIIDSLCKY 197
Query: 483 EH--------KDKQSITNTPNFVPNS----------HYSSFDKRFS------FKPTTTTY 518
H K+ ++ PN V S +S + S P T+
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A + V+A L ++M + P+ ++ LI+ ++ A Q+ + M
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PD+ Y T IK +SKR++ LF EM H + + VTY TL++ G
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Q+ V++ M G + L++ C
Sbjct: 378 AQK---VFKQMVSDGVPPDIMTYSILLDGLC 405
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 366
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 367 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 458
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 459 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 482
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 483 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525
Query: 610 K 610
+
Sbjct: 526 R 526
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P+ T + L+ C R+ AL+++M +G P+ I++T LI
Sbjct: 72 KLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 130
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A+ ++ M + G P++V Y + + + AF+L +M+ +I+ ++V + T+
Sbjct: 131 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 190
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ + +Y V L ++++M G + N LI C
Sbjct: 191 IDSLCKY---RHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 513 PTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P+ +N L+ A D AL+ +M +G P+ ++ + L++ + A+
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M E G PD + +TT I + +A +L + M QPNLVTY ++
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G ++ + M A +A+ +I+ C+
Sbjct: 160 CKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 218 PRADILFCNFVREFGK-KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P D + +R G+ KRD + L +D ++ +P+ +ID+ G +
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATL-LFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKAC 334
+ + + +N+ + Y NSL+ + + L E+++ M+K GV + S+N +L C
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCC 234
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG LA + E +EA+G+ K + T++T++ AK+ A KV ++M SAG+
Sbjct: 235 GKAGKVGLAYQFMDE---MEARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ T++ +I A A AG + +A +F +M +AGC N N+L+ A V+A ++ A
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Query: 455 LF 456
++
Sbjct: 351 IY 352
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 175/417 (41%), Gaps = 61/417 (14%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
RY +V A + +G+ + + + KH S PN Y + +I G+
Sbjct: 11 RYHVLVSNA------VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGN 64
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ + + + + + ++N +++ A+ + +++ +M+ +G AD +Y I
Sbjct: 65 VVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAI 124
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+++ A ++ E +E +G Y+ ++ ++ A + A+ V + M
Sbjct: 125 LIRSLGRCKRDEEATLLFDE---MEERGCTP-SAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L + P+ T +SLI A + G E A +FE M ++G N+ N +L C +A +
Sbjct: 181 LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKV 240
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A++ + ME +
Sbjct: 241 GLAYQF-----------------------MDEMEAR------------------------ 253
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP + T+N L+ Y +A ++ EMR+ GL+P+ ++T +I+A +GN+ A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
++ M + G S +VV Y I V++ R + A ++ +MK I P+ +T L
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++L N Y + ++ V A ++ ++ M K G+ D YN++L
Sbjct: 37 FQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGK 96
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A +++ +K + D +TY+ +++ K + A + ++M G TP
Sbjct: 97 ANMIDEACKLFASMKSMGCPA----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTP 152
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I+ AG +E AM + ++ML P+ N L+ A + + A +F
Sbjct: 153 SAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIF 212
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ K+ VA+ T
Sbjct: 213 ER--MKKSGVAV---------------------------------------------NTV 225
Query: 517 TYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
++N ++ CC +V M+EM G+ PN I++ LI+ G + A ++L+
Sbjct: 226 SFNAMLD-CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR G++PDV YT I+ ++ + +AF +F +M+ N+VTY L+ A + G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y DM K G
Sbjct: 345 YQDARD---IYFDMKKKG 359
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 26/336 (7%)
Query: 327 YNILLKACCLA--GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
Y++L+ +A G + ++ E + L+ G K + +TY +++ A +A+
Sbjct: 12 YHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGS-KPNAYTYKCVIQSLVKAGNVVLAMD 70
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ M+ G+ P+T+ ++ +++ A ++++A LF M GC + IL+++
Sbjct: 71 FLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLG 130
Query: 445 EACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + A LF R T S D RI + K+ + N P+
Sbjct: 131 RCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDK--NLAPD 188
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
D + T + + C + R M+ G++ N +S+ ++D CG
Sbjct: 189 ------DYTLNSLITAVSRTGRTELACEIFER-------MKKSGVAVNTVSFNAMLDCCG 235
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G V A Q + M G+ P+ + + T I R+K +A+ + +EM+ + P++
Sbjct: 236 KAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVF 295
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
TY ++ A ++ G++ + ++ DM KAG AN
Sbjct: 296 TYTCMIEAFAKAGNMGKA---FEMFGDMEKAGCSAN 328
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 52/273 (19%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+ +I + AG V AM ++M++ G EP++ N++L +A D A
Sbjct: 44 GSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEA 103
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+LF S K+ +DY
Sbjct: 104 CKLFASM---KSMGCPADDY---------------------------------------- 120
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
TY IL+++ C L +EM G +P+ ++T +ID +G +E A+ +
Sbjct: 121 ----TYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVV 176
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
LK M + ++PD + I R+ R + A +FE MK + N V++ +L +
Sbjct: 177 LKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGK 236
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
G + Q + +M G K N LI
Sbjct: 237 AGKVGLAYQFM---DEMEARGIKPNSITFNTLI 266
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVG 543
QS+ N V + + +P T YN+++ KA D L M+++G
Sbjct: 57 QSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMID--EACKLFASMKSMG 114
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ ++ ILI + G E A + M E G +P AYT I + ++ R++ A
Sbjct: 115 CPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++M + P+ T +L+ A SR G + +++ M K+G N ++
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTG---RTELACEIFERMKKSGVAVNTVSFNAML 231
Query: 664 E 664
+
Sbjct: 232 D 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
+ DK S KP TY ++++ V A+ +++M GL P+ + + +++D
Sbjct: 36 EFQELDKHGS-KPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGL 94
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + ++ A ++ M+ G D Y I+ R KR ++A LF+EM+ P+
Sbjct: 95 GKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSA 154
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
Y ++ + G ++ + V + M +D L LI
Sbjct: 155 PAYTNVIDIYCKAG---RIESAMVVLKKMLDKNLAPDDYTLNSLI 196
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+ +M+E + + G PN ++ +I + +GNV A+ L M + G+ PD + Y
Sbjct: 29 RIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYN 88
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++ + +A LF MK + TY L+R+ G ++ ++ +M
Sbjct: 89 VVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRS---LGRCKRDEEATLLFDEM 145
Query: 648 WKAGYKANDTYLKELIEEWCEG 669
+ G + +I+ +C+
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKA 167
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ GRI+ + VLKK+ + +AP D L R +G E+ + E +++
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAP----DDYTLNSLITAVSR---TGRTELACEIFERMKKS 218
Query: 185 RLPVKELDEEFRIVQLCVNKPD-VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRA 243
+ V + F + C K V LA ++
Sbjct: 219 GVAVNTV--SFNAMLDCCGKAGKVGLAYQF------------------------------ 246
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
D + PN T+I+ G ++ + +++RS +T +++ + ++
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A ++ E++ +M+K G A++ +YN+L+ A AG A++IY ++K KG+L
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKK---KGILP- 362
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKE 387
D T + + ++ K ++L E
Sbjct: 363 DAITATVLQQLAGKCKLSGISLDENE 388
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 58/385 (15%)
Query: 248 KKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
KK+ ++Y T+I +CG G+ + +Y+++ V+ ++ V+N+++N + A
Sbjct: 257 KKNERGQDLYTYSTLIHGLCG-SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 316 IEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADSM 370
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +V + AL + E+ + +T +SS+IN G +++ + ++M
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+PN CN ++ V A + + A R F NM
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFF-----------------------GNMVS 467
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
K F PT TYN L+ + AL+ EM
Sbjct: 468 K-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PN I++++L++ ++ AL + E G PDV + I S +++ A
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
L+ EMK PNLVT+ TL+
Sbjct: 564 LQLYSEMKQRNCVPNLVTHNTLMEG 588
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 181/400 (45%), Gaps = 33/400 (8%)
Query: 242 RAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+ +D +K+ L+ SP+++ T+I+ G + +++++ + VT ++ +
Sbjct: 138 KQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 197
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N L++ D+ E+++ + K V ++ SYN+++ C G + EI+ +K
Sbjct: 198 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 257
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E D++TYST++ + A +V ++M GV+P+ + +++++N A
Sbjct: 258 KNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 313
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E+ + L++ M + GC NIL++ E + D A + W L + D
Sbjct: 314 GRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----D 364
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTD- 528
++ + H + N N S ++ + + T Y+ ++ C +
Sbjct: 365 CCADSMTYGVLVHGLCK------NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 418
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V ++++M G PN +I+ + +E AL+ M G P VV Y
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 478
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
T I +++R +A++L +EM +PN++TY L+
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 72 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 127
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 128 NILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 187
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 188 RGVTPDVACYNILI---------DGFFK-------------------------------- 206
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 207 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 261
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRG 343
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 160/372 (43%), Gaps = 37/372 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 95 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 149
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 150 MWGQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 208
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLF-------RSWTL-SK 463
+ A ++E +L+ PN N+++ + +FD +F ++ R L +
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 268
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ + G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 328
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 329 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 369
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV V
Sbjct: 370 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA---GV 426
Query: 644 YQDMWKAGYKAN 655
M K G K N
Sbjct: 427 LDQMTKHGCKPN 438
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 59/300 (19%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G + + + + N YV N+++N V A L+ L + NM G
Sbjct: 411 INGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGC 470
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YN L+ A E Y VK + KG K ++ TYS ++ K
Sbjct: 471 FPTVVTYNTLINGLSKAERF---SEAYALVKEMLQKG-WKPNMITYSLLMNGLCQGKKLD 526
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MAL + L G P+ + +I+ ++G VE A+ L+ EM Q C PN N L+
Sbjct: 527 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + F+RA +++ D I
Sbjct: 587 EGFYKVRDFERASKIW--------------------DHI--------------------- 605
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDA 557
++ +P +YNI +K C+ +R+ +N+ G+ P I+W IL+
Sbjct: 606 ------LQYGLQPDIISYNITLKGLCS-CHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P +++SL+NA + ++A F G PN Q NIL++ QFD+A
Sbjct: 84 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--- 509
L +W G+ + + + + + N + S K F
Sbjct: 144 KELL-NWMW-------GQGFSPDVFSYGTLIN----------SLAKNGYMSDALKLFDEM 185
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACG 559
P YNIL+ +++ ++N ++ + PN S+ ++I+
Sbjct: 186 PERGVTPDVACYNILIDG----FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + + +I M+++ D+ Y+T I S L A +++EM + P++V
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
Y T+L R G +++CL +++ M K G + +Y
Sbjct: 302 VYNTMLNGYLRAG---RIEECLELWKVMEKEGCRTVVSY 337
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 509 FSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F +P +YN L+ A + ++ T+GLSPN ++ ILI +
Sbjct: 83 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 142
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L M G SPDV +Y T I ++ + A LF+EM + P++ Y L+
Sbjct: 143 AKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 202
Query: 627 ARSRYGSL 634
+ G +
Sbjct: 203 GFFKKGDI 210
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 160/384 (41%), Gaps = 64/384 (16%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ + FNSL+ L+ +++ M G D SY L++ C AG A E++
Sbjct: 163 DAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELF 222
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E+ + D++T++ +VK DA + L + + M G P T +++L++
Sbjct: 223 REMT--------QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
E+A + EM +G P C I++ A + A R+F S +
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCE-- 332
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
P TYN +++ C
Sbjct: 333 ---------------------------------------------PNVWTYNAIVQGFCN 347
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y+ AL+++MR G+ P+ +++ +LI G++ A ++L++M +G++ D
Sbjct: 348 AGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYT 407
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I ++ ++ +A SLF+ +++ I+PN VT+ T++ + G L +
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFL---E 464
Query: 646 DMWKAGYKANDTY-LKELIEEWCE 668
+M AGY A DTY IE C+
Sbjct: 465 NMISAGY-APDTYTYSPFIENLCK 487
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 31/346 (8%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M++LG +Y L+ C A++I E+ G++ V T + +V
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFD---SGLMPC-VVTCTIVVNA 309
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A++V E M G PN T+++++ NAG V +AM L ++M + G EP+
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369
Query: 433 SQCCNILLQA-CVEACQFDRAFRLFR---SWTLSKTQVALGEDYD-----GNTDR----I 479
N+L++ C++ AFRL R L+ Q D G D
Sbjct: 370 VVTYNLLIRGQCIDG-HIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 480 SNMEHKDKQSITNTPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKACCTD 528
+E++ + + T N V N FD +F P T TY+ ++ C
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKT 488
Query: 529 YYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L ++EM + P+ +++TI+I+ N A +I M G SPDVV Y
Sbjct: 489 KGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTY 548
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
TT+++ RL +A ++ EMK + + + Y TL+ + G
Sbjct: 549 TTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIG 594
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYN L++A C D + ++ M G P+ ++ LI + +E A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G S D V+Y I+ + R+ +A LF EM QP++ T+ L++
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCD 242
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G ++ L + Q M + G++ L++ WC
Sbjct: 243 AG---RGEEGLCMLQKMKELGWRPTTRAYAALVDLWC 276
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 141/363 (38%), Gaps = 61/363 (16%)
Query: 114 EMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC 162
EM SG++ + REGR+ V V + + G P
Sbjct: 290 EMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEP-------NVWTYNAIV 342
Query: 163 QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV---NLAIRYACIVPR 219
Q ++G+V + L++ + E C +PDV NL IR CI
Sbjct: 343 QGFCNAGKVYKAMALLDQMRE-----------------CGVEPDVVTYNLLIRGQCI--- 382
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ SA R + + + + Y +ID G ++ +++
Sbjct: 383 --------------DGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLA 337
+ L + + N FN+++N KF + +NM G D +Y+ ++ C
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC-- 486
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
T +QE + + K V K Y+ ++ + + + +A ++ M+S G +P+
Sbjct: 487 -KTKGSQEGLFFIDEMLQKDV-KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPD 544
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++ + A N G +++A ++ EM + ++ N L+ Q DRA + +
Sbjct: 545 VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILK 604
Query: 458 SWT 460
T
Sbjct: 605 HMT 607
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 43/361 (11%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A +V DM G +P+ I+ ++L+ A +A +F ML +G EP++ ++L+
Sbjct: 159 AERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILK 218
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------------GNTDRISNM-----EH 484
VE +F A F + L + L D GN ++ + E
Sbjct: 219 IFVEGNKFKEAEETFET-LLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRER 277
Query: 485 KDKQSITNTPNFVP-NSHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
QS + + ++Y K R +P +Y +L+ A +AL
Sbjct: 278 GVPQSTVTYNSLMSFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAV 337
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P H ++ IL+DA SG V+ A + K MR D +PD+ +YTT + V
Sbjct: 338 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVN 397
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ ++ A F +K +PN+VTY TL++ Y + +++ + Y++M G KAN
Sbjct: 398 ASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKG---YAKISNLEKMMEKYEEMQVHGIKAN 454
Query: 656 DTYLKELIEEWCEGVIQDKNQNQG-------EVTLCRRTNSQRPQSLLLEKVAVHLQKSA 708
+++ + KN++ G E+ C ++ ++LL +K
Sbjct: 455 QAIYTAMMDAYG------KNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEE 508
Query: 709 A 709
A
Sbjct: 509 A 509
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 26/370 (7%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+++ F V +GK+ D A R + K SP++ +++ G Y K+ +++
Sbjct: 139 SEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVF 198
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYKNMQKLGVMADMASYNILLKAC 334
+ S + + ++ + KF T E + +K + D +++++
Sbjct: 199 RRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMY 258
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AGN A++I+G ++ +GV + V TY++++ + ++ K + M AG+
Sbjct: 259 RKAGNYEKARKIFGLMRE---RGVPQSTV-TYNSLMSFETN---YKEVSKTYDQMQRAGL 311
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++++ LINA A E+A+ +FEEML AG P + NILL A + D+A
Sbjct: 312 RPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 371
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F+S + D T +S + N + + K+ F+P
Sbjct: 372 VFKSMRRDRCT----PDICSYTTMLS--------AYVNASDMEGAEKFFRRLKQDGFEPN 419
Query: 515 TTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+K A ++ ++ EM+ G+ N +T ++DA G + + A+ K
Sbjct: 420 VVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFK 479
Query: 573 IMREDGMSPD 582
M G+ PD
Sbjct: 480 EMGFCGVPPD 489
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 53/117 (45%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +L+ A G G+ A ++ M + G SP V+++T ++ + K+ +A S+F
Sbjct: 139 SEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVF 198
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
M +P+ +TY +L+ E ++ D K+ K + +I
Sbjct: 199 RRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMI 255
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 169/396 (42%), Gaps = 81/396 (20%)
Query: 267 GICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C D RA + E++ S+ + +N++++ + + + +M G
Sbjct: 89 GLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 148
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL----------DVFTYSTIVKV 372
D+ +YN LL A +Y E K EA G+ K D+ TY+T++
Sbjct: 149 DVVAYNGLLDA------------LYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDG 196
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + A+K+ +D+++ G P+T+T++S++ A +++A +F++M+ +GC PN
Sbjct: 197 FCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPN 256
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+I+L R L+ T
Sbjct: 257 GATYSIVLSGHCRVGNMARCLELYEEMT-------------------------------- 284
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPN 547
+KRFS P N ++ C D ++V + EM +G P+
Sbjct: 285 -------------EKRFS--PDVLLCNAVIDMLCKAKKVDDAHKV---LEEMSKIGAVPD 326
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ IL+D + V+ A ++ M ++G +PD+V+Y+ + ++ ++ A LF+
Sbjct: 327 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 386
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
M ++ P++VT+ L+ + G L E + L V
Sbjct: 387 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 171/419 (40%), Gaps = 38/419 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFT 308
+P++ T+ID G C A +++D+ ++ + +NS++ A ++
Sbjct: 184 APDLITYNTLID--GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E++K M G + A+Y+I+L C GN E+Y E+ DV +
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR----FSPDVLLCNA 297
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + AK A KV E+M G P+ +T++ L++ LV++A LF M+ G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHK 485
C P+ +++L + + A LF L V DG E K
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
D + + N +P+ T LM C D +A L M G
Sbjct: 418 DLLDVMSEHNVLPDG---------------VTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIM-REDG-MSPDVVAYTTAIKVCVRSKRLKQ 601
+ + I++ G + AL K M + DG SPDVV YTT + + + R+ Q
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522
Query: 602 AFSLFEEMKHYQIQPNLVTYITL---LRARSRYGSLHEVQQCL---AVYQDMWKAGYKA 654
A F++M P+ V Y TL LR + R+ + Q + D +KA +A
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAPLRA 581
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 54/298 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV TYSTI+ AL++ E+M GV P+ T++ +++ AG V++A LF
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M++ GC N+ N L+ + +RA++L +
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKL-----------------------LEE 105
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
M K ++P TYN ++ C K + M
Sbjct: 106 MASK------------------------GYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKVCVRSK 597
+ G SP+ +++ L+DA G V A + K M + ++PD++ Y T I R +
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +A LF+++ P+ VTY ++L +R ++ E ++ +++ M +G N
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE---MFKKMVDSGCAPN 256
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P TY+ ++ C +AL + EM G++P+ ++TI++D +G V+ A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M E G S + VAY I + + +++A+ L EEM +P+ +TY T+L
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
R G + E +Q + M GY +
Sbjct: 125 LCRMGKVSEAKQ---FFDSMPSRGYSPD 149
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ ++++ +I +G V AL++++ M E G++PDV YT + R+ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A LF +M N V Y L+ + +++ + ++M GY+ ++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKD---ENIERAYKLLEEMASKGYEPDNIT 117
Query: 659 LKELIEEWC 667
++ C
Sbjct: 118 YNTILSGLC 126
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 25/401 (6%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
T I V G+C G + R + ED Q NI +N+L++ D++ ++ ++
Sbjct: 188 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 247
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + + +Y ++ C G+ + E + ++G L ++V Y+TI+
Sbjct: 248 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLME---MNSRG-LTVNVQVYNTIIDARYKH 303
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A++ E M+ G P+ +T+++LI+ G V +A L E+ L G PN
Sbjct: 304 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 363
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ A + +DRA +W + T+ D + + + + T
Sbjct: 364 TPLIHAYCKQGGYDRA----SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR- 418
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+R F P YNILM C + K L+ EM + P+ + L
Sbjct: 419 ------EKMLERGVF-PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 471
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+D +GN++ A ++ ++ E GM+P +V Y IK + +K A + MK +
Sbjct: 472 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 531
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
P+ TY T++ Y H++ ++++M K K N
Sbjct: 532 APDEFTYSTVIDG---YVKQHDLDGAQKMFREMVKMKCKPN 569
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 169/393 (43%), Gaps = 58/393 (14%)
Query: 214 ACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--G 270
CI +I+F N + + KK D+ A + K P + II+ G C G
Sbjct: 215 GCI---PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN--GFCKKG 269
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASY 327
D+ + ++ S+ +T+N+ V+N++++ + H +K +E + M + G D+ +Y
Sbjct: 270 DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK-AVETIEGMIECGCKPDIVTY 328
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G A ++ ++ KG++ + F+Y+ ++ + + A
Sbjct: 329 NTLISGSCRDGKVSEADQL---LEQALGKGLMP-NKFSYTPLIHAYCKQGGYDRASNWLI 384
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G P+ +T+ +L++ AG V+ A+ + E+ML+ G P++ NIL+
Sbjct: 385 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG----- 439
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVPN 499
L + + L ++ L E D QS+ T F+ N
Sbjct: 440 -------LCKKFKLPAAKLLLAEMLD--------------QSVLPDAFVYATLVDGFIRN 478
Query: 500 SHYSSFDKRF------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
+ K F P YN ++K C A+ +N M+ L+P+ ++
Sbjct: 479 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 538
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +ID +++GA ++ + M + P+V+
Sbjct: 539 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 30/314 (9%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
++ F YS+++K+ A ++ + V E+M ++P S +I A +++GLVE+A+ L
Sbjct: 92 INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALEL 151
Query: 421 FEEMLQAGCE-PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ +L+ P+ CN LL V+ + + A R +T + G +G +
Sbjct: 152 YYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA----RKFTCIMVK---GLCKEGKLEEG 204
Query: 480 SNMEHKDKQSITNTPNFV-PNSHYSSFDKRF---------------SFKPTTTTYNILMK 523
+ +D+ PN + N+ + K+ F PT TY ++
Sbjct: 205 RKL-IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 263
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D+ + L+ EM + GL+ N + +IDA G++ A++ ++ M E G P
Sbjct: 264 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 323
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+V Y T I R ++ +A L E+ + PN +Y L+ A + G L
Sbjct: 324 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 383
Query: 642 AVYQDMWKAGYKAN 655
+M + G+K +
Sbjct: 384 I---EMTERGHKPD 394
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 194/468 (41%), Gaps = 43/468 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYE 280
F REF ++ D +LR + ++ P+ +I +I V G G + K ++
Sbjct: 101 FAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFH 160
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DL S++ T Y SL+ A + + E+ M+ GV A+YN +L AC A
Sbjct: 161 DLPSESRTALSYT--SLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARAT 218
Query: 339 NTVLAQE----IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ + + ++ E++H + V + D+ TY+T++ A + + ML AGV
Sbjct: 219 DPPVPFDMLLGLFAEMRHDPSPSV-RPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGV 277
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC------CNILLQACVEACQ 448
P+T ++ +++A A AG + + LF EM G P+ + L+ A EA
Sbjct: 278 LPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVA 337
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
R + + T L + Y G R + ++ T P
Sbjct: 338 VLRQMQADGCPPTAATYRVLLDLY-GRQGRFDGVRELFREMRTTVP-------------- 382
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P T TYN+L + + V L +M + P+ + ++ ACG G E
Sbjct: 383 ----PDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHED 438
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L + +GM P AYT ++ + ++A+ F M P + TY L
Sbjct: 439 AREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALAN 498
Query: 627 ARSRYGSLHEVQQCLAVYQDMW-KAGYKANDTYLKELIEEWCEGVIQD 673
A ++ G E + A++ M A + + LIE +C+G D
Sbjct: 499 AFAKGGLFQEAE---AIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLD 543
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/173 (17%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ C ++ CG G + +R + + + ++ + + L+ H +
Sbjct: 418 PDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVA 477
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + + +YN L A G L QE + ++ D ++ +++
Sbjct: 478 FNMMTEIGSLPTIETYNALANAFAKGG---LFQEAEAIFSRMTNNAAIQKDKDSFDALIE 534
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ A+K +M + P+ + ++NA AG+++++ FEE+
Sbjct: 535 AYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEL 587
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 198/453 (43%), Gaps = 67/453 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ L A+ + P++ I T+I++ G DY K+ +++ L+
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + ++NS++N+ KF E + M++ G+M D SY IL+ A +
Sbjct: 123 ASGIAPDKVIYNSMINLYGK-AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKY 181
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--------ADAKWWQMALKVKEDMLSA 392
+ A++++ E+K KG+ +LDV T + ++ V+ A+ +W M+ +
Sbjct: 182 LEAKQVFLEMK---TKGI-QLDVTTCNMMIDVYGKLEMVRDAEELFWSMS-------KTL 230
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDR 451
G+ N +T++++I A L+ +A ++F M + G EPN N +L Q ++
Sbjct: 231 GIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEK 290
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDK-R 508
A RL R M+ + + ++T + +D+
Sbjct: 291 AMRLVR-----------------------KMQQRGIEPNAVTYSTLISIYGKTGKYDRAA 327
Query: 509 FSFKPTTTTY----NILMKACCTDYYR------VKALMNEMRTVGLSPNHISWTILIDAC 558
F FK IL ++ Y R K L+ E++ + P + +IL A
Sbjct: 328 FLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAE 387
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+E A ++ E G + V Y + I++ +R+KR K A +FE M+ P+
Sbjct: 388 ----KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDS 443
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T + LL A YG L +++ +Y DM + G
Sbjct: 444 ETTVVLLAA---YGQLRQLEDAEKLYLDMRERG 473
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 197/434 (45%), Gaps = 32/434 (7%)
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ F++L++ A+ L+ + + M+ G+ D+ ++ L++ + A ++ +
Sbjct: 61 FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSK 120
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K A G+ D Y++++ ++ AK+++ A + +M AG+ P+T++++ LINA A
Sbjct: 121 LK---ASGIAP-DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYA 176
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+ +A +F EM G + + CN+++ + A LF W++SKT LG
Sbjct: 177 ESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF--WSMSKT---LG 231
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCT 527
+ T +K+ + ++ N + + +P TYN + +
Sbjct: 232 IQQNVVTYNTMIKVYKEAELLSEAFNV-----FYYMQNKGGVEPNVITYNTILFLHGLTL 286
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + L+ +M+ G+ PN ++++ LI G +G + A + K +RE G D + Y
Sbjct: 287 QHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQ 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V R+ + A L EE+K QP++V T + ++ L E + +Y
Sbjct: 347 SMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAK---LYWRS 399
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQS----LLLEKVAVH 703
+AG K +I+ + +++N +V R + P S +LL
Sbjct: 400 HEAGEIKESVTYKSMIQLFMR---NKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQL 456
Query: 704 LQKSAAENLAIDLR 717
Q AE L +D+R
Sbjct: 457 RQLEDAEKLYLDMR 470
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P+ YN+++K + + L+ EM L P+ +++ LI G + +E A
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ L+ M G+ PD+V ++T I++ + K +A SLF ++K I P+ V Y +++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ E Q LA +M +AG + LI + E
Sbjct: 140 YGKAKFYKEAQGLLA---EMKEAGLMPDTVSYTILINAYAE 177
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I + G G Y ++ +++ LR + ++ ++ S++ V A + +
Sbjct: 305 PNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL 364
Query: 312 YKNMQKLGVMADMASYNILLKACCL--AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +++ ++ + +IL KA L A GE+K + TY ++
Sbjct: 365 LEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIK----------ESVTYKSM 414
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+++F K + A+ V E+M +G P++ T L+ A +E A L+ +M + GC
Sbjct: 415 IQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGC 474
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +L+ +A + A +F + L
Sbjct: 475 TLEKEVHFQMLKLYGDARKIREAEDMFAALKL 506
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 168/370 (45%), Gaps = 25/370 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+ + + LG + SY L+ C G T A ++ ++ ++ K +++ +V Y+T
Sbjct: 162 LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL---LRRVDGK-LVQPNVVMYNT 217
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ K A + +M+S G++P+ +T+++LI+ G ++ A LF +M+
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
PN NIL+ C E R +K +A+ D + D+
Sbjct: 278 INPNVYTFNILVDGFCKE-----------RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDR 326
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGL 544
+ N + +++ +R P +Y+I++ C +V MN EM +
Sbjct: 327 YCLVKEVNKAKHI-FNTISQR-GVNPNIHSYSIMIHGFCK-IKKVDEAMNLFKEMHCNNI 383
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++ LID G + AL+++ M + G+ D + Y + + ++ ++ +A +
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L +MK IQP++ TY TL+ + G L + + V++D+ GY + +I+
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR---IVFEDLLVKGYILDVNIYTAMIQ 500
Query: 665 EWCEGVIQDK 674
+C + D+
Sbjct: 501 GFCSHGLFDE 510
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 18/315 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++Y M G+ D+ +YN L+ C+ G A +++ ++ + +V+T++
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN----INPNVYTFNI 287
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V F + + A V M+ G+ P+ T++SL++ V +A H+F + Q G
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN +I++ + + D A LF+ + + Y+ D + +
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI-IPDVVTYNSLIDGLCKL-----G 401
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
I+ V H D+ TYN ++ A C ++ + AL+ +M+ G+ P
Sbjct: 402 KISYALKLVDEMH----DR--GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++T L+D +G +E A + + + G DV YT I+ ++ L
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515
Query: 607 EEMKHYQIQPNLVTY 621
+M+ PN VTY
Sbjct: 516 SKMEENGCIPNAVTY 530
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 177/424 (41%), Gaps = 43/424 (10%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L +N +I+ F ++ V ++ + +++ M+ G+ +D+ +IL+ G
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L+ + ++ + + +V T +T++K AL+ + +++ G N +
Sbjct: 123 NPLSFSVLAKILKMGYEP----NVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +LIN G A+ L + +PN N ++ + + + AF L+ S
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY-SE 237
Query: 460 TLSKTQVALGEDYDGNTDRISNM----EHKDKQSITNT---PNFVPNSHYSSF------- 505
+SK + D IS + KD + N N PN + +
Sbjct: 238 MVSK---GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294
Query: 506 DKRF-------------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
++R KP TYN LM C + + K + N + G++PN S
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++I+I V+ A+ + K M + + PDVV Y + I + ++ A L +EM
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 414
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-G 669
+ + +TY ++L A + H+V + +A+ M G + + L++ C+ G
Sbjct: 415 DRGVPHDKITYNSILDALCKN---HQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471
Query: 670 VIQD 673
++D
Sbjct: 472 RLED 475
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 242 RAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+D + +S SP++ +I I G + ++ + +N+ N+Y FN L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ LK V M K G+ D+ +YN L+ CL A+ I+ + +
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ---R 346
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV ++ +YS ++ F K A+ + ++M + P+ +T++SLI+ G +
Sbjct: 347 GV-NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY 405
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
A+ L +EM G + N +L A + Q D+A L
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ N+ ++ +NSL++ + + L++ M GV D +YN +L A C
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A + ++K +G+ + D+ TY+T+V + A V ED+L G
Sbjct: 434 KNHQVDKAIALLTKMKD---EGI-QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I + GL ++++ L +M + GC PN+ I++ + + + D+A +L
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549
Query: 456 FR 457
R
Sbjct: 550 LR 551
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P++ ++ID G+C G + + +++ + V + +NS+++ H + +
Sbjct: 385 PDVVTYNSLID--GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 442
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ G+ D+ +Y L+ C G A+ ++ + L KG + LDV Y+ +
Sbjct: 443 ALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED---LLVKGYI-LDVNIYTAM 498
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + +L + M G PN +T+ +I + + ++A L EM+ G
Sbjct: 499 IQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 25/345 (7%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+ L A C +G+ A+ + + L + DV TY+T++ A V
Sbjct: 14 NVCLAALCRSGSLERAESVLIDAILLG----MPPDVVTYNTLLAAHCRAAGLDAGFAVLR 69
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M AGV PN +T++SLI A + GL +A+ LF+EML+AG P++ N+L+ +
Sbjct: 70 RMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSG 129
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A+R+F K Y+ D + H TN + +
Sbjct: 130 HPEDAYRVFADMA-EKGVTPCTTTYNTLLDGLFKAGHA-----TNAYRMF------RYLQ 177
Query: 508 RFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R TYN ++ C Y R+ ++ E+ +PN +++T ++ C G
Sbjct: 178 RVGLPVGIVTYNTMINGLCRSGKVGYARM--ILRELGRTEHTPNAVTYTTVMKCCFRYGR 235
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L+ + E G PDV Y T I V+ R+++A + E M + + Y T
Sbjct: 236 FDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNT 295
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L+ R + G L + + L++ M + G ++++ L+ C+
Sbjct: 296 LIHLRCQEGKLDDAFELLSM---MEEGGLESDEYTFSILVNGLCK 337
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 26/372 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT---LEVYKNMQKLGVMADMASYNILLKA 333
A+ +R V N +NSL+ V A + T L+++ M + G+ D SYN+L+
Sbjct: 66 AVLRRMREAGVWPNAVTYNSLI-VAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHC 124
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+G+ A ++ ++ KGV TY+T++ A A ++ + G
Sbjct: 125 LFRSGHPEDAYRVFADMAE---KGVTPCTT-TYNTLLDGLFKAGHATNAYRMFRYLQRVG 180
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ +T++++IN +G V A + E+ + PN+ +++ C +FD+
Sbjct: 181 LPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGL 240
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
F LS + D IS + K + N YS + +
Sbjct: 241 ETF----LSLLEGGHIPDVFPYCTVISALVKKGRVEEANA--------YSELMIQSGSRL 288
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T YN L+ C + A L++ M GL + +++IL++ G++E A + L
Sbjct: 289 DTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQL 348
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M M +VVAY + +S ++ A L +MK + TY +L+ R
Sbjct: 349 CYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDMK----LKDDFTYTSLVHGLCRV 404
Query: 632 GSLHEVQQCLAV 643
G H + L +
Sbjct: 405 GRYHMASKFLRI 416
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 125/583 (21%), Positives = 237/583 (40%), Gaps = 106/583 (18%)
Query: 122 KSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVL 181
+ I GR D VVGV ++ LG+ D + L+ R D V+
Sbjct: 191 RMIASGRTDMVVGVFWEIERLGLDA----DAHTYVLVVQALCRNDDKEGVD--------- 237
Query: 182 EEFRLPVKELDEEFR---------IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+L ++ L+ E R I LC+N+ ++ Y + P ++ + + G
Sbjct: 238 ---KLLIRLLNSETRNPCVFYLNFIEGLCLNQ---MASMAYLLLQPLREVNILVDMSDLG 291
Query: 233 KK-----RDLVSALRAYDASK------KHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
R L + +R DA K +H P++Y+ II+ + K+ I+
Sbjct: 292 IAYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNK 351
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N + +S++ F+ ++++ ++L + D YN+ A G
Sbjct: 352 MVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGK 411
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E + KG+ DV Y+T++ A + +M +G TP+ +
Sbjct: 412 VEEAIELFRE---MTGKGIAP-DVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIV 467
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L A GL ++A+ + M G +P N++++ + A + D+A + S
Sbjct: 468 IYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYES- 526
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-----SFDK--RFSFK 512
+EHK ++ N + V + +F++ R F
Sbjct: 527 ----------------------LEHKSRE---NDASMVKGYCEAGCLDQAFERFIRLEFP 561
Query: 513 PTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ Y L + C + + + L++ M +G+ P + LI A NV A Q
Sbjct: 562 LPKSVYFTLFTSLCAEKNHISKAQDLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQ 621
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR- 628
+I+ + PD+ YT I R LKQA++LF++MK ++P++VTY LL +
Sbjct: 622 FFEILVTKEIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNSNP 681
Query: 629 ------------------------SRYGSLHEVQQCLAVYQDM 647
+RY L++V++ A+++DM
Sbjct: 682 ELDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALFKDM 724
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 179/424 (42%), Gaps = 51/424 (12%)
Query: 235 RDLVSALRAYDASKKHLSSP---NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
R ++ +A+D K + N I +I+ C G++ + ++E+ R N+ L+
Sbjct: 337 RKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDR 396
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N + ++ +E+++ M G+ D+ +Y L+ CCL G A ++
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL--- 453
Query: 350 VKHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+E G K D+ Y+ + A Q AL+ + M GV P +T + +I
Sbjct: 454 --MIEMDGSGKTPDIVIYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGL 511
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR-------------- 454
AG +++A +E + E ++ +++ EA D+AF
Sbjct: 512 IVAGKLDKAEAFYESLEHKSRENDAS----MVKGYCEAGCLDQAFERFIRLEFPLPKSVY 567
Query: 455 --LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--------TPNFVPNSHYSS 504
LF S K ++ +D DR+ + + ++S+ N +
Sbjct: 568 FTLFTSLCAEKNHISKAQDL---LDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQFFE 624
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY I++ C + + AL +M+ + P+ +++T+L+
Sbjct: 625 ILVTKEIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLL------- 677
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N L + + M + PDVV YT I + +K+A++LF++MK +I P++VTY
Sbjct: 678 NSNPELDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYT 737
Query: 623 TLLR 626
LL+
Sbjct: 738 VLLK 741
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 34/324 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +LGV + + Y L+ A C N A++ + + L K ++ D+FTY+ ++ +
Sbjct: 591 MWELGVEPEKSMYGKLIGAWCRVNNVRKARQFF---EILVTKEIIP-DLFTYTIMINTYC 646
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLFEEMLQAGCEPNS 433
+ A + +DM V P+ +T++ L+N+ N L V++ M F+ +P+
Sbjct: 647 RLNELKQAYALFQDMKRRDVKPDVVTYTVLLNS--NPELDVKREMEAFD------VKPDV 698
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
I++ + +A+ LF+ + + ++ D + T
Sbjct: 699 VLYTIMINRYCQLNDVKKAYALFKD--MKRREIV-----------------PDVVTYTVL 739
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
P + K F KP Y +L+ C D K + ++M G+ P+ +
Sbjct: 740 LKNNPELDLTREMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPY 799
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LI C GN++ A I +M E G+ PD V+YTT I R+ +++AF+L +EM
Sbjct: 800 TALIAGCCKMGNLKEAKMIFDLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMKEMLE 859
Query: 612 YQIQPNLVTYITLLRARSRYGSLH 635
I+P + + A+S+ L
Sbjct: 860 KGIKPTQASLSAVHYAKSKAKGLR 883
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+++ CC ++ L E R + + + + + + DA G G VE A+++ + M G
Sbjct: 367 ILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++PDV+ YTT I C + AF L EM P++V Y L +R G E
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIVIYNVLAGGLARNGLSQEAL 486
Query: 639 QCLAVYQDMW-KAGYKANDTYLKELI 663
+ L + +D K Y ++ ++ LI
Sbjct: 487 ETLKLMEDRGVKPTYVTHNMVIEGLI 512
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ +V +++ + L++ DLK ++ M + GV D A Y L+ CC G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTALIAGCCKMG 810
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A+ I+ L + LK D +Y+T++ F + + A + ++ML G+ P
Sbjct: 811 NLKEAKMIF----DLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGIKPTQ 866
Query: 399 ITWSSLINACANA 411
+ S++ A + A
Sbjct: 867 ASLSAVHYAKSKA 879
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 27/244 (11%)
Query: 402 SSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++L+ A AN + E+A+ +F + G P+ + N LL + + + D +F W
Sbjct: 150 TALVKAYANLEMFEEAIDIFFRTYHSLGRAPDIKALNFLLNRMIASGRTDMVVGVF--WE 207
Query: 461 LSKTQVALGEDYDGNTD--------RISNMEHKDKQSIT--NTPNFVPNSHYSSFDKRFS 510
+ + LG D D +T R + E DK I N+ P Y +F +
Sbjct: 208 IER----LGLDADAHTYVLVVQALCRNDDKEGVDKLLIRLLNSETRNPCVFYLNFIEGLC 263
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ +L++ R ++ +M +G I++ ++ +E A +
Sbjct: 264 LNQMASMAYLLLQPL-----REVNILVDMSDLG-----IAYRRVVRGLCNEMRIEDAEKA 313
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M E G+ PDV Y+ I+ ++ + +AF +F +M + N V ++L+ +
Sbjct: 314 FLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQ 373
Query: 631 YGSL 634
G+
Sbjct: 374 MGNF 377
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 46/352 (13%)
Query: 294 FNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N A + ++ M + + D+ SY+IL+ C A+++Y ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L +V TY+ + A V E+M++AG +P+ IT+S+LI+ +
Sbjct: 509 IDLNCVP----NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A +QA LFE M+ GC PN+ N LL + + D A LFR V G
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM------VERGC 618
Query: 471 DYDGNTDRISNME--------HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
D DR++ K +Q++ V H P YN L+
Sbjct: 619 D----PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH----------DPDVVAYNCLL 664
Query: 523 KACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
K ++R K L M + P+ +S I+ID + ++ A+++ + M +
Sbjct: 665 KG----FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720
Query: 577 D-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D G SPD+V Y + I +RL +A +F+E+ ++ P+ + LL A
Sbjct: 721 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 52/312 (16%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN LL + C A A I+ + ++ DV +YS ++ F A K+
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFST---MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M+ PN T+++ +N G + A ++EEM+ AGC P+ + L+ A
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ D+A LF +T ++ G
Sbjct: 566 RKHDQAHELF------ETMISRG------------------------------------- 582
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+P TYN L+ C + +A L +M G P+ +++T L+ G +
Sbjct: 583 ----CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A+++ M G PDVVAY +K R+ + +A LF+ M Q +P+ V++ +
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIM 698
Query: 625 LRARSRYGSLHE 636
+ S+ L +
Sbjct: 699 IDGLSKAKRLDD 710
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 40/334 (11%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
K DVFTY+ ++ + + A +V E M++ GV PN T++ L+ + ++A+
Sbjct: 125 FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAV 184
Query: 419 HLFEEMLQAGCEPNS---QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
F EM+ G +P+S Q L+A + +F R F G D +
Sbjct: 185 RFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVF---------------GRDLE-- 227
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCT-- 527
R++ +E K+++ NFV K F KP T Y+ ++ A C
Sbjct: 228 -KRVA-VEMMLKKALL--VNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLE 283
Query: 528 DYYRVKALMNEMRTVGLSP-NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L EM +P N+++WT + SG +E A + + M+E +S Y
Sbjct: 284 NLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVY 342
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I++ + S R+ +A E+ IQP+ T ++++ + G V L++ +
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG---RVDSALSLLET 399
Query: 647 MWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
M K GY + LI E C+ DK Q E
Sbjct: 400 MIKRGYCPDMATHSMLINELCKA---DKIQEAQE 430
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 131/340 (38%), Gaps = 54/340 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-GVLKLDVFTY 366
L + + M K G DMA++++L+ C A AQE ++ ++ K F+Y
Sbjct: 393 ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF---LQGMDRKISSRSSSCFSY 449
Query: 367 STIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++++ AK A + M+S P+ +++S LI+ + +A L+++M+
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C PN N L + R R+ + + + VA G
Sbjct: 510 DLNCVPNVTTYNAFLNGLM------RKGRIADAQGVYEEMVAAG---------------- 547
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVG 543
P TY+ L+ + + + L M + G
Sbjct: 548 -------------------------CSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ L+ + A ++ + M E G PD V YTT + +++QA
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+F+EM P++V Y LL+ R G E +Q V
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
G ++ +YE++ + + ++ +++L++ HD E+++ M G +
Sbjct: 531 GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH--ELFETMISRGCRPNAV 588
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN LL C A E++ + + +G D TY+T++ F + + A++V
Sbjct: 589 TYNCLLHGLCKESKPDEAHELF---RKMVERGC-DPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+S G P+ + ++ L+ AG +A LF+ M+ C+P++ NI++ +
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 446 ACQFDRAFRLF 456
A + D A +F
Sbjct: 705 AKRLDDAVEVF 715
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 156/373 (41%), Gaps = 27/373 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+++N +++ +N L++ + DLK +V++ M GV+ + +Y +L+++ C N
Sbjct: 120 LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERN 179
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +GE + KG K Y + + A K + + D+
Sbjct: 180 SDEAVRFFGE---MVDKG-FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMM 235
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + L+N +E A LF M+++GC+P++ + ++ A + D AF+LF
Sbjct: 236 LKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLE 294
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + ++N+ S + + + + S + Y
Sbjct: 295 MAVE------------SKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVY 342
Query: 519 NILMKACCTDYYRVKALMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++L++ KA + G + P+ + +I +G V+ AL +L+ M +
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSL 634
G PD+ ++ I ++ ++++A + M K + +Y +LL + + +
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 635 HEVQQCLAVYQDM 647
H Q A++ M
Sbjct: 463 H---QAFAIFSTM 472
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 182/436 (41%), Gaps = 63/436 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K RD A R D +K P+ + TII G+C + A+ Y
Sbjct: 168 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK--GLCDNGRVDSALVHY 225
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLA 337
D++ +N ++ + L++ + + + ++M + G ++ +YN L+ C
Sbjct: 226 RDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ ++ + DVFTY+ ++ + + Q K+ ++M+ G PN
Sbjct: 285 GNMDEAVVLFNQM----LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++L+++ +G A +L + ML+ C+P+ N+++ + Q D A+ LF+
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T D+ + P T
Sbjct: 401 LMT-------------------------DRGCL----------------------PDIYT 413
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNI++ C + L+ M G P+ +++ ++ + V+ A ++ +++R
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G DVV +T I +S+RL A L EM+ P++V Y L+ +
Sbjct: 474 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG---FCKAD 530
Query: 636 EVQQCLAVYQDMWKAG 651
++ + LA + +M G
Sbjct: 531 QLDKSLAFFSEMLDKG 546
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 42/408 (10%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ T+I+ G C G+ ++ ++ + + + +++ +N L++ +
Sbjct: 268 APNVVTYNTLIN--GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV----F 364
++ + M K G + +YN L+ + +G + A + A+ +L+ D F
Sbjct: 326 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL--------AQMMLRRDCKPSHF 377
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T++ ++ +F +A ++ + M G P+ T++ +I+ A ++ A L E M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRI 479
+AGC P+ N ++ +A Q D A+ ++ R+ V DG + R+
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
+ E ++ +R P Y IL+ C K+L +
Sbjct: 498 DDAEKLLREM-----------------ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G P I+++I+ID S V +LK M E G++PD + YT+ I +S
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD 600
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+A+ L++ MK P +VTY L+ + L E L V +
Sbjct: 601 SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVME 648
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 186/486 (38%), Gaps = 106/486 (21%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
+ +LD+ + C +P + ++ C + L FVR KK+ A AYD
Sbjct: 109 LDDLDKAVKFFDWCTGQPGYKHS-KFTC-----NCLLSAFVR---KKK----AQEAYDLF 155
Query: 248 KKH---LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
K H L SP+ T+I+ G C A D
Sbjct: 156 KNHRCGLCSPDSITYSTLIN--GFC-------------------------------KARD 182
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + M+K G++ A YN ++K C G A Y +++ A V+
Sbjct: 183 FQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVI----- 237
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ +V + A + EDM+ AG PN +T+++LIN G +++A+ LF +M
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L+ C P+ NIL+ + + R L + V G +
Sbjct: 298 LENSCSPDVFTYNILIDG------YCKQERPQDGAKLLQEMVKYGCE------------- 338
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
PNF+ TYN LM + + A L M
Sbjct: 339 ---------PNFI-------------------TYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
P+H ++ ++ID G ++ A ++ ++M + G PD+ Y I R+ R+ A
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
L E M P++VTY +++ + + E + VY+ + GY + L
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE---VYEVLRNGGYFLDVVTCSTL 487
Query: 663 IEEWCE 668
I+ C+
Sbjct: 488 IDGLCK 493
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 173/408 (42%), Gaps = 25/408 (6%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K+ PN T++D G Y+ + + + + ++ + + FN ++++ L
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
E+++ M G + D+ +YNI++ C A A+++ ++ + G DV TY
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL---LERMTEAGCPP-DVVTY 449
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++IV A A +V E + + G + +T S+LI+ + ++ A L EM +
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-K 485
G P+ IL+ +A Q D++ F S L K V Y D++ +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFF-SEMLDKGCVPTVITYSIVIDKLCKSARVR 568
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
D + T +R P Y ++ C Y L M+ G
Sbjct: 569 DGCMLLKT-----------MLER-GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+P +++ +L+D ++ A+ +L++M DG PD V Y + +S +AF
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF+ MK P Y LL ++ + ++ Q + ++++ +AG
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLL---TKLVAEEKMDQAMEIWEEALEAG 721
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 188 VKELDEEFRIVQLCVNK---PDV---NLAIRYACIVPRAD------------------IL 223
V +LD + + QL ++ PD+ N+ I AC R D +
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR------A 277
+ + V K + A Y+ + ++ C T+ID G+C KSR
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID--GLC----KSRRLDDAEK 502
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ ++ + L++ A L +L + M G + + +Y+I++ C
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ ++ +K + +GV D Y++++ + + A ++ + M G
Sbjct: 563 ---KSARVRDGCMLLKTMLERGVTP-DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++ L++ +++A+HL E M GC P++ N + ++ + D+AFRL
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRL 678
Query: 456 FRS 458
F++
Sbjct: 679 FQA 681
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V + L +++D + E+YK M++ G + +YN+L+ C E ++
Sbjct: 592 VIDGLCKSDSYDEAY--ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL---DEAIHLLEV 646
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G L D TY+++ F + A ++ + M S G +P +S L+
Sbjct: 647 MESDGCLP-DTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
++QAM ++EE L+AG + + + L Q
Sbjct: 706 KMDQAMEIWEEALEAGADVDPEISRTLQQ 734
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRA 277
D++ C+ + K R L A + +++ S+P++ + TI+ + G C D + KS A
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV-VAYTIL-IHGFCKADQLDKSLA 537
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ + + ++ +++ + ++ + K M + GV D Y ++ C
Sbjct: 538 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC 597
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ + A E+Y +K V TY+ +V A+ + E M S G
Sbjct: 598 KSDSYDEAYELYKLMKQTGCAPT----VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCL 653
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++S+ + + ++A LF+ M GC P ++LL V + D+A +
Sbjct: 654 PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Query: 456 F 456
+
Sbjct: 714 W 714
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 183/435 (42%), Gaps = 55/435 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+R +D K++ P I T++ + G ++ + +
Sbjct: 232 VTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHE 291
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + +Y + L+ + ++ VYKNM K G D+ N L+ +
Sbjct: 292 MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDR 351
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNT 398
A E++ E++ L +V TY+TI+K +F D A E M GV P++
Sbjct: 352 LKEAVELFEEMRLLNCTP----NVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSS 407
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S LI+ VE+A+ L EEM + G P L+ + +A +++ A LF+
Sbjct: 408 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQE 467
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L E+ ++ R+ Y+ K F
Sbjct: 468 ---------LKENCGSSSVRV----------------------YAVMIKHF--------- 487
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C + L NEM+ +G P+ ++ LI + ++ A + + M E+G
Sbjct: 488 -----GKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PD+ ++ + R+ K+A +F +MK I+P+ V+Y T+L SR G E
Sbjct: 543 CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEAT 602
Query: 639 QCLAVYQDMWKAGYK 653
+ + ++M G++
Sbjct: 603 KLM---KEMNSKGFE 614
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YN ++ G+ E+Y E + ++G D TYS ++ F A++
Sbjct: 196 GTYNSVILMLMQEGHHEKVHELYNE---MCSEGHCFPDTVTYSALISAFGKLNRDDSAVR 252
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ ++M G+ P +++L+ G VE+A++L EM C P L++
Sbjct: 253 LFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLG 312
Query: 445 EACQFDRAFRLFRSWTLS--KTQVALGEDYD---GNTDRISN-MEHKDKQSITN-TPNFV 497
++ + + A+ ++++ K V L + G +DR+ +E ++ + N TPN V
Sbjct: 313 KSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVV 372
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY---RVKALMNEMRTVGLSPNHISWTIL 554
TYN ++K+ D + + M+ G+ P+ +++IL
Sbjct: 373 -------------------TYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + VE AL +L+ M E G P AY + I ++KR + A LF+E+K
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ Y +++ +G + + ++ +M K G
Sbjct: 474 SSSVRVYAVMIK---HFGKCGRFNEAMGLFNEMKKLG 507
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 136/354 (38%), Gaps = 72/354 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P +Y +I G G + +Y+++ ++ + N+L+N+ + LK +E+
Sbjct: 299 PTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVEL 358
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ L ++ +YN ++K+ L + E ++ ++ GV+ FTYS ++
Sbjct: 359 FEEMRLLNCTPNVVTYNTIIKS--LFEDKAPPSEASSWLERMKKDGVVP-SSFTYSILID 415
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA-------------------- 411
F + AL + E+M G P + SLIN+ A
Sbjct: 416 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSS 475
Query: 412 ---------------GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +AM LF EM + GC P+ N L+ V A D AF LF
Sbjct: 476 SVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLF 535
Query: 457 RSWTL--------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
R+ S + G G R M K K S
Sbjct: 536 RTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSS------------------- 576
Query: 509 FSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KP +YN ++ C + + LM EM + G + I+++ +++A G
Sbjct: 577 -TIKPDAVSYNTVL-GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVG 628
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
+PT TYN ILM + +V L NEM + G P+ ++++ LI A G + A+
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M+E+G+ P YTT + + + ++++A +L EM+ + P + TY L+R
Sbjct: 252 RLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGL 311
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G V+ VY++M K G K + + LI
Sbjct: 312 GKSG---RVEDAYGVYKNMLKDGCKPDVVLMNNLI 343
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + +A + K++ S ++ + +I G CG + ++
Sbjct: 439 PPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMG 498
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +++ ++Y +N+L+ V A + +++ M++ G D+ S+NI+L
Sbjct: 499 LFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLA 558
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E++ ++K +K D +Y+T++ + A ++ A K+ ++M S G
Sbjct: 559 RTGGPKRAMEMFAKMK----SSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFE 614
Query: 396 PNTITWSSLINACA 409
+ IT+SS++ A
Sbjct: 615 YDLITYSSILEAVG 628
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 192/469 (40%), Gaps = 72/469 (15%)
Query: 233 KKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL 289
K + +R +D K + PN+ ++D G+C G + + ++E + + N+
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD--GLCKFGRFKEVGEVWERMVANNLQP 297
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ + L++ + D+ VY + K G++ D A YN L+K C AG A + +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 348 GE---------------VKHLEAKGVLK----------------LDVFTYSTIVKVFADA 376
+K L G++ D T+ T++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A + E+ +G + ++SS+IN N G + A+ ++E+M + GC+PNS
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 437 NILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSIT 491
N L+ + + A R++ S T + DG ++ ++ +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 492 NTPNFVPN-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCT---- 527
N F P+ + Y S DK+ K +NIL+ C+
Sbjct: 538 N--GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ V + M E + PN +++ L+D +G ++ A + + EDG+ PD+++Y
Sbjct: 596 DEALHVFSDMKEKKNC--PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
T IK R+ + L +E+ I P ++T+ L+RA +YG +
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 28/433 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + K+ L AL D + P++ ++ C G++ K +++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N+ +N +++ K EV++ M + D+ +Y IL+ C +G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y E+ K L +D Y+++VK F A Q A K + AG+ N
Sbjct: 314 DVDGAARVYSEI----IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ +I ++G+V++A+ L++ + + C P++ L+ + ++AF +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S Q+ + Y + + N+ D + Y DK KP +
Sbjct: 429 EARVSGKQLDVFS-YSSMINGLCNVGRLVDAVKV-----------YEKMDKD-GCKPNSH 475
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN L+ C Y A + ++M G SP I++ LID + + A + + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G +PD+ Y + I+ K++ A S+++++ + ++ +++ + L+ G
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG-- 593
Query: 635 HEVQQCLAVYQDM 647
+V + L V+ DM
Sbjct: 594 -KVDEALHVFSDM 605
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 24/353 (6%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ ++ +YNI+L++ C G+ A ++ ++ + + D TYST++ A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ----VAPDRITYSTLMCGLAKQDRL 209
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNI 438
AL + ++M + V P+ + +++L+ C AG E+ M +++++++ G PN N+
Sbjct: 210 DHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+L C+F R + W + VA D T I + H + + +
Sbjct: 270 MLDGL---CKFGRFKEVGEVW---ERMVANNLQPDVITYGI--LIH----GLCRSGDVDG 317
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILID 556
+ S + YN L+K C RV+ + G + N ++ I+I
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQ-AGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376
Query: 557 ACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG V+ A+++ ++ +D PD V + T I ++ +AF++FEE + Q
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +Y +++ G L + + VY+ M K G K N LI +C+
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDA---VKVYEKMDKDGCKPNSHIYNALISGFCQ 486
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ +++
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + + V P+ IT+S+L+ A ++ A+ L +EM ++ +P+ C N
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
LL C +A +F++ R++ D++ KD +
Sbjct: 233 ALLGGCFKAGEFEKVMRVW--------------------DKLV----KDPGA-------- 260
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+P TYN+++ C + V + M L P+ I++ ILI
Sbjct: 261 --------------RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG+V+GA ++ + + G+ D Y + +K ++ R+++A+ ++ ++
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 616 PNLVTYITLLRARSRYGSLHE 636
NL TY +++ G + E
Sbjct: 367 -NLRTYNIMIKGLFDSGMVDE 386
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 47/240 (19%)
Query: 404 LINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+++A + A + + A+ F + GC P + N LL A V A +F A F S +
Sbjct: 89 VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS-- 146
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ +F +R + P TYNI++
Sbjct: 147 ---------------------------------------HGAFGRRIA--PNLQTYNIVL 165
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
++ C D R L + +R ++P+ I+++ L+ ++ AL +L M +
Sbjct: 166 RSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQ 225
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV Y + C ++ ++ +++++ K +PNL TY +L ++G EV +
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 176/427 (41%), Gaps = 63/427 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 375 PSTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + ++ Y+ ++ A C L E YG + KG+ DV TYST+
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALC---KYQLVSEAYGLFSEMTVKGI-SADVVTYSTL 488
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + P+ T++ L++A G V++A + ML+A
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ + + +A +F + +L
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL---------------------------- 580
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C +AL EM + P+
Sbjct: 581 -------------------MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ L+D SG + ++ MR+ G DV+ Y + I ++ L +A +LF
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+MK I+PN T+ LL + G L + Q+ V+QD+ GY + +I C
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE---VFQDLLTKGYHLDVYIYNVMIYGHC 738
Query: 668 -EGVIQD 673
+G++++
Sbjct: 739 KQGLLEE 745
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 182/428 (42%), Gaps = 50/428 (11%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDG---RLAKPNVEMYNTIID--ALCKYQLVSEAYGLFSEMT 160
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ N+ +++L+ LK L + M + ++ +YNIL+ A C G
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K +V TYST++ + + A V M GVTP+ ++
Sbjct: 221 EAKSVLA----VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN V++A++LF+EM+ + P QF++ F
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFPP--------------IIQFNKILDSFAKMKH 322
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS--HYSSFDKRFS--------- 510
T V+L +E K Q T N + N H FS
Sbjct: 323 YSTAVSLSH----------RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+T T N L+K C KAL +++ G N +S+ LI+ G+ GA+
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L+ + P+V Y+T I + + + +A+ LF EM I ++VTY TL+
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492
Query: 629 SRYGSLHE 636
G L E
Sbjct: 493 CIVGKLKE 500
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 197/491 (40%), Gaps = 48/491 (9%)
Query: 188 VKELDEEFRIVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
VK+ F + L PDV N+ I C + R D +A
Sbjct: 254 VKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD--------------------KAL 293
Query: 245 DASKKHLSS--PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+ K+ + S P + I+D Y + ++ L + + +++ N L+N
Sbjct: 294 NLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353
Query: 303 H--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
H + F V + K G + N L+K CL G A + + L A+G +
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK---LLAQG-FQ 409
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ +Y+T++ + A+K+ + PN +S++I+A LV +A L
Sbjct: 410 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 469
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM G + + L+ + A L L KT Y D +
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL-KTINPDVRTYTILVDALG 528
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
E K K++ + + + KP TYN LM Y KA + N
Sbjct: 529 K-EGKVKEAKSVLAVML----------KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M +G++P+ ++TILI+ S V+ AL + K M + M PD V Y++ + +S R
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ + L +EM+ +++TY +L+ + G L + +A++ M G + N
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHL---DKAIALFNKMKDQGIRPNTFT 694
Query: 659 LKELIEEWCEG 669
L++ C+G
Sbjct: 695 FTILLDGLCKG 705
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 78/416 (18%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 420 NGVCKIGDTRGAIKLLRKIDG---RLTKPNVEMYSTIID--ALCKYQLVSEAYGLFSEMT 474
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +++L+ LK + + M + D+ +Y IL+ A
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA-------- 526
Query: 342 LAQEIYGEVKHLEAKGVL--------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
L +E G+VK EAK VL K DVFTY+T++ + + A V M G
Sbjct: 527 LGKE--GKVK--EAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
VTP+ T++ LIN + +V++A++LF+EM Q P++ + L+ ++
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC------KSG 636
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+ W D I M + + +
Sbjct: 637 RISYVW-----------------DLIDEMRDRGQPA------------------------ 655
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + + AL N+M+ G+ PN ++TIL+D G ++ A ++
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + G DV Y I + L++A ++ +M+ PN VT+ ++ A
Sbjct: 716 QDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P+++ +I+ G C M A+ ++++ +N+ + ++SL++ + + +
Sbjct: 584 TPDVHTYTILIN--GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYV 641
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ M+ G AD+ +YN L+ C G+ A ++ ++K +G+ + + FT++
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD---QGI-RPNTFTFTI 697
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A +V +D+L+ G + ++ +I GL+E+A+ + +M + G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR 457
C PN+ +I++ A + + D+A +L R
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLR 786
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 150/391 (38%), Gaps = 33/391 (8%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K L + + G + SY L+ C G+T A + ++ AK +V
Sbjct: 79 VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKP----NVE 134
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+TI+ + A + +M G++ N +T+S+LI G +++A+ L M
Sbjct: 135 MYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVM 194
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ PN NIL+ A + + A + + + DG
Sbjct: 195 VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDG---YFLV 251
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
E K Q + N + + P +YNI++ C RV +N +
Sbjct: 252 YEVKKAQHVFNAMSLM------------GVTPDVHSYNIMINGFC-KIKRVDKALNLFKE 298
Query: 542 VGLS--PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ LS P I + ++D+ + A+ + + G+ PD+ I ++
Sbjct: 299 MILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQI 358
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
FS+ ++ P+ VT TL++ G +V++ L + + G++ N
Sbjct: 359 TFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG---QVKKALHFHDKLLAQGFQLNQVSY 415
Query: 660 KELIEEWCEGVIQDKNQNQGEVTLCRRTNSQ 690
LI C+ I D +G + L R+ + +
Sbjct: 416 ATLINGVCK--IGD---TRGAIKLLRKIDGR 441
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
SI N + V S + KR + P T T N L+K C +AL +++ G
Sbjct: 38 SIQNVDDAVSLSVLTKILKR-GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQL 96
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +S+ LI+ G+ A++ L+ + P+V Y T I + + + +A+ LF
Sbjct: 97 NQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLF 156
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
EM I N+VTY TL+ G L E L V
Sbjct: 157 SEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNV 193
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P+ +++D G+C G + +++R
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD--GLCKSGRISYVWDLIDEMRD 650
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ +NSL++ N H L + ++ M+ G+ + ++ ILL C G
Sbjct: 651 RGQPADVITYNSLIDGLCKNGH-LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG LDV+ Y+ ++ + AL + M G PN +T+
Sbjct: 710 DAQEVF---QDLLTKG-YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
+INA ++A L +M+ G
Sbjct: 766 DIIINALFKKDENDKAEKLLRQMIARG 792
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +V +A+++ Q A++V E M G P+ + L+N+ A A L ++++M++
Sbjct: 131 SWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVR 190
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN N+L+ AC ++ ++A +L +++ + + NT IS K
Sbjct: 191 VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE---MESRFIFPDLFTYNT-LISLYCKK- 245
Query: 487 KQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
HY + +R P TYN L+ C + +AL
Sbjct: 246 ------------GMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI 293
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G +PNH+++T LID ++E AL++ ++M +G+ P VV Y + ++ ++K
Sbjct: 294 NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L EM +++P+ VT TL+ A + G ++ + V + M +AG K + K
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIG---DMGSAMKVKKKMLEAGLKPDQFTFKA 410
Query: 662 LIEEWCE 668
LI +C+
Sbjct: 411 LIHGFCK 417
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 168/383 (43%), Gaps = 35/383 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E +R +++ L+N A +VYK M ++GV+ ++ +N+L+ ACC
Sbjct: 149 VFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACC 208
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G+ A+++ E +E++ + D+FTY+T++ ++ AL +++ M GV+
Sbjct: 209 KSGDVEKAEQLLNE---MESRFIFP-DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T++SLI G + +A+ LF E+ G PN L+ + A RL
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322
Query: 456 FRSWTLSKTQVAL-------------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + G+ D N ++ M + + T N + N++
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR-LLNEMSERKVEPDNVTCNTLINAYC 381
Query: 503 SSFD--------KRF---SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
D K+ KP T+ L+ C + K + EM G SP++
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ L+D+ N E +++ + G+ D+ Y I+ + +++ A +F M
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501
Query: 610 KHYQIQPNLVTYITLLRARSRYG 632
+ ++ + V Y +L A + G
Sbjct: 502 QGKGMKGDSVVYTSLAYAYFKAG 524
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 55/289 (19%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+ S L+ AN+ + + A+ +FE M G +P+ C +LL + +A
Sbjct: 126 NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA---------- 175
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R++NM K + + VPN H
Sbjct: 176 ---------------------RLTNMVWKVYKKMVRV-GVVPNIH--------------- 198
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+N+L+ ACC D + + L+NEM + + P+ ++ LI G AL I M
Sbjct: 199 IFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPD+V Y + I R R+++A LF E+ PN VTY TL+ R L
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDL 316
Query: 635 HEVQQCLAVYQ-DMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
E + V + + G ++ L++L E EG I+D N+ E++
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCE---EGKIKDANRLLNEMS 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 154/412 (37%), Gaps = 62/412 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP I F + K D+ A + + + P+++ T+I + G + ++
Sbjct: 193 VVPNIHI-FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I + + V+ +I +NS L+ C
Sbjct: 252 LGIQDRMERGGVSPDIVTYNS---------------------------------LIYGFC 278
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ E+ V TY+T++ + + AL+++E M G+
Sbjct: 279 REGRMREALRLFREINGATPNHV------TYTTLIDGYCRVNDLEEALRLREVMEVEGLH 332
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++S++ G ++ A L EM + EP++ CN L+ A + A +
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK- 391
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ K + G D T + + + F+ + D FS P+
Sbjct: 392 -----VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFL----FEMLDAGFS--PSY 440
Query: 516 TTYNILMKACCTDYY------RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+TY+ L+ + YY V L +E+ GL + + LI +E A +
Sbjct: 441 STYSWLVDS----YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAER 496
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
I +M+ GM D V YT+ ++ + A + +EM ++ L Y
Sbjct: 497 IFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 165/388 (42%), Gaps = 67/388 (17%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGN 339
+R Q V +N+ F +M A K VY M+K GV+ ++A++N LL A C + N
Sbjct: 128 MRRQGV-VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKN 186
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQEI+ ++ G D TYS +++ + A KV DML AG P+ +
Sbjct: 187 VRKAQEIFEQMN-----GRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIV 241
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ ++++ G VE+A+ + ++M GC+P + ++L+ + R+
Sbjct: 242 TYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHT------YGVEMRI---- 291
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D ++ K I P YN
Sbjct: 292 ----------------EDAVATFLDMQKDGIV---------------------PDVVVYN 314
Query: 520 ILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
L+ A C + +RV M++M G++PN +W I+++ G + A ++ + M
Sbjct: 315 ALVTAFCKVKKFDNAFRV---MDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRM 371
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ PD YT IK+ + RL+ A +++ M+ Q P++ T+ L+ G
Sbjct: 372 IKR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKG-- 428
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKEL 662
EV Q + +DM + G + + +L
Sbjct: 429 -EVSQACVLLEDMIEKGIRPPGSTFGKL 455
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 20/308 (6%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V ++ T+V A + +Q+ V M GV N T+ ++ A A V++A++ F
Sbjct: 102 VRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVV-NVETFGIIMRKYARAQKVDEAVYTFN 160
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M + G PN N LL A ++ +A +F E +G +
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIF-------------EQMNGRFSPDAKT 207
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
+ PN S +P TY I++ + C +A+ + +M
Sbjct: 208 YSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMT 267
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ G P +++L+ G +E A+ M++DG+ PDVV Y + + K+
Sbjct: 268 SRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFD 327
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
AF + ++M+ + I PN T+ +L ++ SL + + V++ M K +DTY
Sbjct: 328 NAFRVMDDMEGHGITPNSRTWNIIL---NKLISLGKDDEAYRVFRRMIKRCQPDSDTYTM 384
Query: 661 ELIEEWCE 668
+I+ +CE
Sbjct: 385 -MIKMFCE 391
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 126/276 (45%), Gaps = 41/276 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYED 281
F +R++ + + + A+ ++ +K+ PN+ +++ C +C + K++ I+E
Sbjct: 139 FGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLL--CALCKSKNVRKAQEIFEQ 196
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + + ++ L+ A +L +VY +M G D+ +Y I++ + C G
Sbjct: 197 MNGR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGR 255
Query: 340 T----VLAQE-----------IYGEVKH-----------------LEAKGVLKLDVFTYS 367
+ Q+ IY + H ++ G++ DV Y+
Sbjct: 256 VEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVP-DVVVYN 314
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+V F K + A +V +DM G+TPN+ TW+ ++N + G ++A +F M++
Sbjct: 315 ALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR 374
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
C+P+S ++++ E + + A ++++ L +
Sbjct: 375 -CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQ 409
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P +I ++ G+ + A + D++ + ++ V+N+L+ KF V
Sbjct: 273 PTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRV 332
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIV 370
+M+ G+ + ++NI+L G A ++ +K + D TY+ ++
Sbjct: 333 MDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQP------DSDTYTMMI 386
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K+F + +MALKV + M P+ T+S LIN + G V QA L E+M++ G
Sbjct: 387 KMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 446
Query: 431 PNSQCCNILLQ 441
P L Q
Sbjct: 447 PPGSTFGKLRQ 457
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 128/567 (22%), Positives = 224/567 (39%), Gaps = 86/567 (15%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELDE 193
+L ++ E+GV P S +L R+ D G V ++ G++ R + +
Sbjct: 230 ILSRMREVGVRP----SSSAISILFRLLLRVGDYGSVWKLLRGMI------RDGPRPCNH 279
Query: 194 EFRIVQLCV-NKPDVNLAIRYACIVPR----ADI----LFCNFVREFGKKRDLVSALRAY 244
F I+ LC K + +A ++P+ D+ + N R G+ D AL
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD---ALGFL 336
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
K+ P++ TII G+ +++R I+E ++ ++ N+ ++N+LM+ A
Sbjct: 337 HLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKA 396
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ +Y+ M+ G+ D A++NIL+ G + E++ + + L D
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD----WSLSSLVPD 452
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
Y V A A++ EDML G+ P+ + ++S+I A + AG + A ++
Sbjct: 453 CSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYK 512
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML G P+S C+ +L LG G ++
Sbjct: 513 IMLMFGLVPSSSTCSSML---------------------------LGLSKKGRLQEARDL 545
Query: 483 EHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT----YNILMKACCTDYYRVKALM 536
+K DK N F D F T Y + + C D A +
Sbjct: 546 LYKMIDKGLPVNKVAFT-----VLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFI 600
Query: 537 N----------------EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ EM G PN+ + LI G + AL++ + MR+ G+
Sbjct: 601 DGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLL 660
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ I + R+K AF F EM H + P+ VTY TL+ + + +
Sbjct: 661 PDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEF 720
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWC 667
L M+ +G+ + T I+ +C
Sbjct: 721 L---NKMYASGWDPDITTYNIRIQGFC 744
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 192/437 (43%), Gaps = 39/437 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F + ++V A + ++ ++ SPN+ + T++ D ++ +YE+
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEE 408
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYKNMQKLGVMADMASYNILLKACCL 336
+R + + + FN L+ A + K+ + E++++ ++ D + Y++ + C
Sbjct: 409 MRDKGIAPDGATFNILV---AGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG A + ++ + KG + V +++++ ++ A + A K + ML G+ P
Sbjct: 466 AGQLDEAMQF---LEDMLEKG-MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVP 521
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ T SS++ + G +++A L +M+ G N +LL + A L+
Sbjct: 522 SSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLW 581
Query: 457 ---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD------ 506
+ + +A DG + E + S + FVPN+ Y+S
Sbjct: 582 YEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNC 641
Query: 507 -------------KRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHIS 550
++ P T NI++ C + R+K+ + EM +G++P+ ++
Sbjct: 642 GKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE-GRMKSAFDAFAEMHHIGVTPDTVT 700
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI ++ A + L M G PD+ Y I+ S+++ +A ++ +E+
Sbjct: 701 YNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI 760
Query: 611 HYQIQPNLVTYITLLRA 627
+ PN VTY T++ A
Sbjct: 761 AVGVVPNTVTYNTMMNA 777
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 169/430 (39%), Gaps = 46/430 (10%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--------NAHDLKFTLEVY 312
+ V G+C G ++ ED+ + + ++ FNS++ NAH + Y
Sbjct: 458 VSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAH------KAY 511
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M G++ ++ + +L G QE + + KG L ++ ++ ++
Sbjct: 512 KIMLMFGLVPSSSTCSSMLLGLSKKGRL---QEARDLLYKMIDKG-LPVNKVAFTVLLDG 567
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A + +M + G+ P+ I +S+ I+ + AGLVE+A F EM + G PN
Sbjct: 568 YFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPN 627
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ N L+ + A +L R Q L D T+ I N K+ + +
Sbjct: 628 NFVYNSLIHGLCNCGKLHEALKLER----EMRQKGLLPDI-FTTNIIINGFCKEGRMKSA 682
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
F H P T TYN L+ C D +N+M G P+ +
Sbjct: 683 FDAFAEMHH-------IGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITT 735
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ I I S + A+ +L + G+ P+ V Y T + V + L +A L ++
Sbjct: 736 YNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAMVLTAKLL 794
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGV 670
PN+VT LL H +Q + +W G K N + I W +
Sbjct: 795 KMAFVPNVVTTNVLLS--------HFCKQGMPEKALIW--GQKLNKLLRADFIGYWLVYI 844
Query: 671 IQ-DKNQNQG 679
+ DK G
Sbjct: 845 LSMDKQATAG 854
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ T++ ++ A C + V+A + ++ VGLSPN + L+ + +V A
Sbjct: 345 KPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANM 404
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + MR+ G++PD + + + + ++ LF + + P+ Y +
Sbjct: 405 LYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLC 464
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
G L E Q L +DM + G + +I + +D ++ L
Sbjct: 465 WAGQLDEAMQFL---EDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 161/380 (42%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMN--VNAHDLKFTL 309
+P+ Y T+I G + +++++ ++ V N ++N+L+ + +L+ L
Sbjct: 180 APDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVAL 239
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M GV +A+YN+ + + G A E + V+ + KG L D FTY+ +
Sbjct: 240 RYRGEMVDRGVSMTVATYNLFVHTLFMEGR---AAEAHALVEEMGEKG-LAPDAFTYNIL 295
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+K+ E M+ G+ +T++SLI+A + G+V++ LF + ++ G
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + DRAF + M +K+
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEI--------------------------MGEMEKKR 389
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
IT P TYN LM+ C + L+ EM G+ P+
Sbjct: 390 IT---------------------PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+ LI G+++ A+++ M G +P ++ Y IK + + A L +
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 489 EMVGNGITPDDSTYISLIEG 508
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 176/424 (41%), Gaps = 42/424 (9%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S ++Y L+S ++ + + L++ F L + ++ +L + ++NI+L
Sbjct: 66 HTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVL--FADIFRLRLPLSTTTFNIML 123
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG V A E+ ++ A TY+T++ F Q +++ +M
Sbjct: 124 RHLCTAGKPVRALELLRQMPSPNA--------VTYNTVIAGFCARGRVQAGIEIMREMRE 175
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ P+ T++++I+ G VE A +F+EML G EPN+ N L+ +
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNTDR----ISNMEHKDKQSITNTPNF 496
+ A R +R + + Y +G + M K T N
Sbjct: 236 EVALR-YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+ N + ++ + K T TY L+ A L N+ G
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG 354
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + LI++ G+++ A +I+ M + ++PD V Y T ++ RL +A
Sbjct: 355 IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L EEM IQP+LV+Y TL+ S G +++ + V +M G+ +I
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKG---DIKDAVKVRDEMMGKGFNPTLLTYNAMI 471
Query: 664 EEWC 667
+ C
Sbjct: 472 KGLC 475
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 139/370 (37%), Gaps = 64/370 (17%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+L +Y ++ L + AS + LL + A VL +I+ + L L T++
Sbjct: 69 SLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVLFADIF--------RLRLPLSTTTFN 120
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ- 426
+++ A AL++ M S PN +T++++I G V+ + + EM +
Sbjct: 121 IMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRER 176
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ ++ + + + A ++F L++ +V
Sbjct: 177 GGIAPDKYTYATVISGWCKVGKVEDATKVFDEM-LTEGKV-------------------- 215
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGL 544
+P YN L+ C AL EM G+
Sbjct: 216 -------------------------EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGV 250
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S ++ + + G A +++ M E G++PD Y I + + K+A
Sbjct: 251 SMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMK 310
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+FE M I+ +VTY +L+ A S G + E + ++ D + G + + LI
Sbjct: 311 MFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR---LFNDAVRRGIRPDLFMYNALIN 367
Query: 665 EWCEGVIQDK 674
C G D+
Sbjct: 368 SHCTGGDMDR 377
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGN 563
+R P TY ++ C + +EM T G + PN + + LI GN
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN 234
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E AL+ M + G+S V Y + R +A +L EEM + P+ TY
Sbjct: 235 LEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L+ + G + ++ + +++ M G +A LI +G++Q+ ++
Sbjct: 295 LINGYCKEG---KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR 345
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 38/188 (20%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
DA ++ + P++++ +I+ GD ++ I ++ + +T
Sbjct: 349 DAVRRGIR-PDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT---------------- 391
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
D +YN L++ CL G E G ++ + +G+ + D+
Sbjct: 392 -----------------PDDVTYNTLMRGLCLLGRL---DEARGLIEEMTKRGI-QPDLV 430
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ ++ + A+KV+++M+ G P +T++++I G A L +EM
Sbjct: 431 SYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490
Query: 425 LQAGCEPN 432
+ G P+
Sbjct: 491 VGNGITPD 498
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 179/431 (41%), Gaps = 50/431 (11%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++ + + + + N LMN + +KF+ V+ + K G D ++ I
Sbjct: 74 YQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTI 133
Query: 330 LLKACCLAG---------NTVLAQE-----------IYGEVKHLEAKGVLKL-------- 361
L+K CL G + V+AQ I G + E K ++L
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 362 ---DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V YSTI+ K A + +M+S ++P+ +T+SSLI+ G ++ A+
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAV 253
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF M+ PN +IL+ + + A K +A+ + D
Sbjct: 254 DLFNRMISDNINPNVYTFSILIDGFCKEGKVREA----------KNVLAVMMKKNVKLDV 303
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ D + N S ++ +R P +Y+I++ C +A L
Sbjct: 304 VTYNSLMDGYCLVKQVN-KAKSLFNVMAQR-GVTPDVWSYSIMINGFCKIKMVDEAMKLF 361
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM + PN +++ L+D SG AL+++ M + G +++ Y + + ++
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+ +A L ++K IQP++ TY L+ + G L + Q+ V++D+ GY N
Sbjct: 422 NHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQK---VFEDLLVKGYSPNI 478
Query: 657 TYLKELIEEWC 667
LI +C
Sbjct: 479 YTYTSLINGFC 489
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 267 GICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G C M A ++E++ + + N+ +NSL++ + LE+ M G +
Sbjct: 347 GFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPS 406
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN +L A C + A + ++K KG+ + D+FTY+ ++ A
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKE---KGI-QPDIFTYTVLINGLCKVGRLDDA 462
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
KV ED+L G +PN T++SLIN N G ++ + + +M GC PN+ IL+ +
Sbjct: 463 QKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522
Query: 443 CVEACQFDRAFRLFR 457
E + D+A +L R
Sbjct: 523 LFEKDENDKAEKLLR 537
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 140/368 (38%), Gaps = 56/368 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++Y M + D+ +Y+ L+ C+ G A +++ + + +V+T+S
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRM----ISDNINPNVYTFSI 273
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + A V M+ V + +T++SL++ V +A LF M Q G
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +I++ + D A +LF E KQ
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFE-------------------------EMHCKQ 368
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P TYN L+ C AL ++EM G
Sbjct: 369 IF----------------------PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPS 406
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I++ ++DA + +V+ A+ +L ++E G+ PD+ YT I + RL A +F
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E++ PN+ TY +L+ G E LA+ M G N + LI
Sbjct: 467 EDLLVKGYSPNIYTYTSLINGFCNKGFFDE---GLAMLSKMKDNGCIPNAITYEILIHSL 523
Query: 667 CEGVIQDK 674
E DK
Sbjct: 524 FEKDENDK 531
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 140/361 (38%), Gaps = 55/361 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SP++ ++I + G + ++ + S N+ N+Y F+ L++ + K
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKN 289
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M K V D+ +YN L+ CL A+ ++ + +GV DV++YS ++
Sbjct: 290 VLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV---MAQRGVTP-DVWSYSIMI 345
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K A+K+ E+M + PN +T++SL++ +G A+ L +EM G
Sbjct: 346 NGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
N N +L A + D+A L L+K
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVL-----LTKI-------------------------- 434
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
K +P TY +L+ C + + ++ G SPN
Sbjct: 435 ----------------KEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNI 478
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++T LI+ G + L +L M+++G P+ + Y I +A L E
Sbjct: 479 YTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538
Query: 609 M 609
M
Sbjct: 539 M 539
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 148/375 (39%), Gaps = 75/375 (20%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ I+ AK +Q AL + + M G+ P+ IT + L+N + G ++ + +F ++L
Sbjct: 61 FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK----TQVALGEDYDG------N 475
+ G P++ IL++ + +A F +++ QV+ G +G
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKAL-YFHDKVVAQGFQLDQVSYGTLINGLCRVGET 179
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHY-----------SSFD-------KRFSFKPTTTT 517
+ + D + + PN V S +FD KR S P T
Sbjct: 180 KAAVQLLRRVDGKLVR--PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRIS--PDVVT 235
Query: 518 YNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL--- 571
Y+ L+ C Y V L N M + ++PN +++ILID G V A +L
Sbjct: 236 YSSLISGFCVVGKLKYAVD-LFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 572 --------------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+M + G++PDV +Y+ I + K +
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LFEEM QI PN+VTY +L+ + G L + +M G +N
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG---RTSCALELVDEMHDRGQPSNIITY 411
Query: 660 KELIEEWCEGVIQDK 674
+++ C+ DK
Sbjct: 412 NSILDAICKNNHVDK 426
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFT 308
PN+ +++D G+C S A+ +++ + NI +NS+++ N H K
Sbjct: 371 PNVVTYNSLVD--GLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + K +K G+ D+ +Y +L+ C G AQ+++ + L KG +++TY++
Sbjct: 429 VLLTKIKEK-GIQPDIFTYTVLINGLCKVGRLDDAQKVFED---LLVKG-YSPNIYTYTS 483
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ++ L + M G PN IT+ LI++ ++A L EM+ G
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 190/435 (43%), Gaps = 42/435 (9%)
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIY-----VFNSLM 298
A K+ + N + C ++ V Y+K+R + ED L Q+ N++ +N+LM
Sbjct: 92 AGKQSKFTHNRFTCNNLLSV------YVKARRV-EDAHLFFQSHMKNVFEPDEVSYNTLM 144
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N A D+K L ++ M+ G+ A + S+NI+L+ C G +A E++ ++
Sbjct: 145 NGFFKAGDVKKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMS----- 198
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ ++ +Y+ ++ ++ A+ + + M+ + P+ +T+ +LI+ V++
Sbjct: 199 GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKE 258
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A LFEE GC P N ++ + + + A L+ + L D +
Sbjct: 259 AYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMV---REPHLKPDMFTYS 315
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
I+ + +++N + D S P TYN L+ C KA M
Sbjct: 316 ALINGL------NLSNRGEKAYELYEEMLDTGCS--PDVVTYNTLLDGLCKSGCEDKA-M 366
Query: 537 NEMRTVGLS----PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
R +G+ PN I++T+LID + A+++ K M + PD V +TT I+
Sbjct: 367 EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQK 426
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ R+ +A LFE + +P+ V + T+L + Y + + ++ M +G
Sbjct: 427 LCKESRIDEAHELFESIGK-TCKPDSVLFNTML---AGYCKITRIDDAKKLHDRMLDSGC 482
Query: 653 KANDTYLKELIEEWC 667
L+ +C
Sbjct: 483 APTLATYTALVTGFC 497
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + GK+R + A ++ ++ P + T+ID CG + +Y+D
Sbjct: 241 VTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDD 300
Query: 282 L-RSQNVTLNIYVFNSLMN-VN-AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ R ++ +++ +++L+N +N ++ + E+Y+ M G D+ +YN LL C +G
Sbjct: 301 MVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG 360
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A EI+ + + V +V TY+ ++ F A+K+ ++M + P+
Sbjct: 361 CEDKAMEIF---RKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+T++++I +++A LFE + + C+P+S N +L + + D A +L
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKL 473
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 126/335 (37%), Gaps = 58/335 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID G ++ ++E+ R++ + +N++++ ++ L +
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297
Query: 312 YKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
Y +M ++ + DM +Y+ L+ L+ A E+Y E+ DV TY+T++
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP----DVVTYNTLL 353
Query: 371 KVFADAKWWQMALKVKEDMLSAGV-TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+++ M V PN IT++ LI+ + A+ L +EM
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P++ ++Q + + D A LF S + KT
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFES--IGKT------------------------- 446
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
KP + +N ++ C T K L + M G +P
Sbjct: 447 ---------------------CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++T L+ +G AL + M E G P+
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 188/459 (40%), Gaps = 38/459 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN R + + L S+ PN+ +I+ G K+ ++ ++
Sbjct: 175 FCNEKR----AEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM 230
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + N+ + ++++ A + V++ M GV D +YN L+ G
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW- 289
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + A G LK D +TY +++ + + A + + M+ G+ PN +
Sbjct: 290 --KEVVRMLEEMSAHG-LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
LI+ A G + + L M++ G P+ NI+ A + D A +F +
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 459 WTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPN-FVPNSHYSSF-------- 505
LS V G D R+ + K Q + PN FV NS
Sbjct: 407 QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 506 DKRFSF-------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
K F F +P +N ++ CT +KA L++ M VG P IS+T LI
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIG 526
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G ++ A + L +M G+ PD Y T + R+ R+ A+ +F EM I P
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+VTY T+L E ++ +Y +M +G + N
Sbjct: 587 GVVTYSTILHGLFTTRRFSEAKE---LYLNMITSGKQWN 622
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 44/370 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTI 369
K M +LG D+ SYN LLK C N A+E E+ H+ A + +V +Y+ +
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFC---NEKRAEEAL-ELLHMMADSQGRSCPPNVVSYAIV 209
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A + +M+ G+ PN +T++++I+ A +V++A +F++M+ G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P++ N L+ + ++ R+ + + D +
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLK-------------------PDCYT 310
Query: 490 ITNTPNFVPNSHYSSFDKRFSF--------KPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ N++ N+ + RF F KP Y IL+ T + L+N M
Sbjct: 311 YGSLLNYLCNNGRCR-EARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GLSP+H + I+ A ++ A+ I M++ G+SPDVV Y I + R+
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG--SLHEVQQCLAVYQDMWKAGYKANDT 657
A F +M + + PN+ + +L+ YG ++ + ++ Y +M G + +
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLV-----YGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484
Query: 658 YLKELIEEWC 667
+ ++ C
Sbjct: 485 FFNTILCNLC 494
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 33/261 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ ++ K+ SP++ +ID G + + + ++ V N
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+VFNSL+ + E Y M G+ D+ +N +L C G + AQ +
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 349 EVKHLEAK-GV------------------------------LKLDVFTYSTIVKVFADAK 377
++ + + GV LK D +TY+T++ + A
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A V +ML G+TP +T+S++++ +A L+ M+ +G + N N
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627
Query: 438 ILLQACVEACQFDRAFRLFRS 458
I+L + D AF+LF+S
Sbjct: 628 IILNGLSKNNCVDEAFKLFQS 648
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEG 566
P TY+IL+ C R+ L + T GL N+I L+ + +
Sbjct: 92 PDPCTYSILIGCFC----RMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147
Query: 567 ALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ---PNLVTYI 622
A+ IL K M E G +PDVV+Y T +K KR ++A L M Q + PN+V+Y
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
++ G +V + ++ +M G + N +I+ C+ + D+ +
Sbjct: 208 IVINGFFTEG---QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-E 310
P++ TI+ C +C G MK++ + + + + + +L + H L + E
Sbjct: 481 PDVVFFNTIL--CNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL--IGGHCLVGRIDE 536
Query: 311 VYKN---MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+ M +G+ D +YN LL C AG + YG + + G+ V TYS
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI---DDAYGVFREMLRNGITP-GVVTYS 592
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ + + A ++ +M+++G N ++ ++N + V++A LF+ +
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ NI++ A ++ + + A LF
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLF 681
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 164/364 (45%), Gaps = 27/364 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +Q + N N ++ V + +++ +++ M GV D SY +++ C G
Sbjct: 160 EMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIG 219
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A + + + +G + +D T++ I+ F+ + AL ++ G+ PN
Sbjct: 220 NILEADKW---LSVMLERGFV-VDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNL 275
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I ++ +I G ++QA + EEM+ G +PN L+ + ++AFRLF
Sbjct: 276 INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF-- 333
Query: 459 WTLSKTQVALGEDYDGN----TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ E++ N T IS +DK N + S K P
Sbjct: 334 -----LKLVRSENHKPNVLTYTAMISGYCREDK---LNRAEMLL-----SRMKEQGLVPN 380
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TY L+ C ++ R LMN M + G SPN ++ +++ G V+ A ++L+
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++G+ PD Y + + + ++QA +LF +M IQP++ +Y TL+ R
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500
Query: 633 SLHE 636
+ E
Sbjct: 501 RMKE 504
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 139/370 (37%), Gaps = 63/370 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGV-LKL 361
LK +E+ M G++ + + N ++K G A+ ++ E V+ ++ + ++
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
V Y I + KW + ML G + T++ +I+ + G +A+ F
Sbjct: 211 MVVMYCKIGNILEADKWLSV-------MLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++ G EPN +++ + +AF + E+ G
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEML-------------EEMVGK------ 304
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL---MNE 538
+KP T+ L+ C + KA +
Sbjct: 305 ----------------------------GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R+ PN +++T +I + A +L M+E G+ P+ YTT I ++
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++A+ L M PNL TY ++ + G VQ+ + +D ++ G K +
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRG---RVQEAYKMLEDGFQNGLKPDKFT 453
Query: 659 LKELIEEWCE 668
L+ E C+
Sbjct: 454 YNILMSEHCK 463
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN T+ID G++ ++ + + S+ + N+ +N+++N + E YK
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ-EAYK 437
Query: 314 NMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ + G+ D +YNIL+ C N A ++ ++ K ++ D+ +Y+T++
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM----LKIGIQPDIHSYTTLI 493
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
VF + + E+ + G+ P T++S+I G + AM F + GC
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRS 458
P+S ++ + + D A L+ S
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDS 581
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 454 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 182/432 (42%), Gaps = 46/432 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T+N L+ A + V+A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G +
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDGVPPD 469
Query: 656 DTYLKELIEEWC 667
L++ C
Sbjct: 470 IMTYSILLDGLC 481
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 165/360 (45%), Gaps = 17/360 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 295
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 411
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 412 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LF + ++PN+VTY T++ S S +Q+ A+ + M + G N LI
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 442
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 443 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 535 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ C + AL+ +M +G P+ ++ + L++ + A+ ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD + +TT I + +A +L + M QPNLVTY ++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG-- 239
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + M A +A+ +I+ C+
Sbjct: 240 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 41/384 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ + R++ID G+C G+ ++ A++ + + + N+ ++N+L+ N +
Sbjct: 354 PDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M + G++ ++ ++NIL+ C G A G VK + +KG D+FT++ +
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD---GLVKVMISKGYFP-DIFTFNIL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ + AL++ + ML GV P+ T++SL+N E M ++ M++ GC
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNME 483
PN NILL++ + D A L ++ +++ V G DG N D
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL----- 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
+ Y+ F K + +T TYNI++ A + + L E
Sbjct: 583 ---------------DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M L P+ ++ +++D +GNV + L M E+G P + I R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYI 622
+ +A + M + P V I
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 167/418 (39%), Gaps = 61/418 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R KK D+ + D K PN++ I G+C G+ + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGC 276
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT-LEVY-KNMQKLGVMADMASYNILLKACCLAGN 339
L Q ++ +N+L+ + KF EVY M G+ D +YN L+ C G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA+ I G+ G + D FTY +++ AL + + L G+ PN I
Sbjct: 337 VQLAERIVGDAVF---NGFVP-DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRS 458
+++LI +N G++ +A L EM + G P Q NIL+ C C D +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-------A 445
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L K ++ G + P T+
Sbjct: 446 DGLVKVMISKG-----------------------------------------YFPDIFTF 464
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ T AL ++ M G+ P+ ++ L++ + E ++ K M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G +P++ + ++ R ++L +A L EEMK+ + P+ VT+ TL+ + G L
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 179/425 (42%), Gaps = 45/425 (10%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ C + G + + ++ + + V+L + FN L+ V D+K ++
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-----KLDVFTYST 368
+ K GV+ ++ +YN+ ++ C G E+ G V+ + G L K DV TY+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRG------ELDGAVRMV---GCLIEQGPKPDVITYNN 291
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +Q A M++ G+ P++ T+++LI G+V+ A + + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ L+ + +RA LF ALG+ N + + +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNE--------ALGKGIKPNVILYNTL----IK 399
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-----CCTDYYRVKALMNEMRTVG 543
++N + + ++ P T+NIL+ C +D L+ M + G
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ ++ ILI +E AL+IL +M ++G+ PDV Y + + ++ + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++ M PNL T+ LL + RY L E L + ++M + LI
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA---LGLLEEMKNKSVNPDAVTFGTLI 573
Query: 664 EEWCE 668
+ +C+
Sbjct: 574 DGFCK 578
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 150/374 (40%), Gaps = 55/374 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G ++ ++E + + ++ +N++M+V F +VY M+ G+ D+ S+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A + + ++ ++G +++V Y T+V F + + ++
Sbjct: 150 TIRMKSFCKTSRPHAALRL---LNNMSSQGC-EMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
ML++GV+ T++ L+ G V++ L +++++ G PN N+ +Q +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A R+ I P
Sbjct: 266 ELDGAVRMVGCL------------------------------IEQGP------------- 282
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP TYN L+ C + + + + +M GL P+ ++ LI G V+
Sbjct: 283 ----KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +I+ +G PD Y + I +A +LF E I+PN++ Y TL+
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 626 RARSRYGSLHEVQQ 639
+ S G + E Q
Sbjct: 399 KGLSNQGMILEAAQ 412
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT +YN +M Y +A + MR G++P+ S+TI + + + AL+
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M G +VVAY T + + + LF +M + L T+ LLR
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G +V++C + + K G N I+ C+
Sbjct: 228 KKG---DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +V +A+++ Q A++V E M G P+ + L+N+ A A L ++++M++
Sbjct: 131 SWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVR 190
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN N+L+ AC ++ ++A +L +++ + + NT IS K
Sbjct: 191 VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE---MESRFIFPDLFTYNT-LISLYCKK- 245
Query: 487 KQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
HY + +R P TYN L+ C + +AL
Sbjct: 246 ------------GMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI 293
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G +PNH+++T LID ++E AL++ ++M +G+ P VV Y + ++ ++K
Sbjct: 294 NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L EM +++P+ VT TL+ A + G ++ + V + M +AG K + K
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIG---DMGSAMKVKKKMLEAGLKPDQFTFKA 410
Query: 662 LIEEWCE 668
LI +C+
Sbjct: 411 LIHGFCK 417
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 168/383 (43%), Gaps = 35/383 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E +R +++ L+N A +VYK M ++GV+ ++ +N+L+ ACC
Sbjct: 149 VFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACC 208
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G+ A+++ E +E++ + D+FTY+T++ ++ AL +++ M GV+
Sbjct: 209 KSGDVEKAEQLLNE---MESRFIFP-DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T++SLI G + +A+ LF E+ G PN L+ + A RL
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322
Query: 456 FRSWTLSKTQVAL-------------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + G+ D N ++ M + + T N + N++
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR-LLNEMSERKVEPDNVTCNTLINAYC 381
Query: 503 SSFD--------KRF---SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
D K+ KP T+ L+ C + K + EM G SP++
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ L+D+ N E +++ + G+ D+ Y I+ + +++ A +F M
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501
Query: 610 KHYQIQPNLVTYITLLRARSRYG 632
+ ++ + V Y +L A + G
Sbjct: 502 QGKGMKGDSVVYTSLAYAYFKAG 524
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 55/289 (19%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+ S L+ AN+ + + A+ +FE M G +P+ C +LL + +A
Sbjct: 126 NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA---------- 175
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R++NM K + + VPN H
Sbjct: 176 ---------------------RLTNMVWKVYKKMVRV-GVVPNIH--------------- 198
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+N+L+ ACC D + + L+NEM + + P+ ++ LI G AL I M
Sbjct: 199 IFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPD+V Y + I R R+++A LF E+ PN VTY TL+ R L
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDL 316
Query: 635 HEVQQCLAVYQ-DMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
E + V + + G ++ L++L E EG I+D N+ E++
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCE---EGKIKDANRLLNEMS 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 154/412 (37%), Gaps = 62/412 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP I F + K D+ A + + + P+++ T+I + G + ++
Sbjct: 193 VVPNIHI-FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I + + V+ +I +NS L+ C
Sbjct: 252 LGIQDRMERGGVSPDIVTYNS---------------------------------LIYGFC 278
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ E+ V TY+T++ + + AL+++E M G+
Sbjct: 279 REGRMREALRLFREINGATPNHV------TYTTLIDGYCRVNDLEEALRLREVMEVEGLH 332
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++S++ G ++ A L EM + EP++ CN L+ A + A +
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK- 391
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ K + G D T + + + F+ + D FS P+
Sbjct: 392 -----VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFL----FEMLDAGFS--PSY 440
Query: 516 TTYNILMKACCTDYY------RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+TY+ L+ + YY V L +E+ GL + + LI +E A +
Sbjct: 441 STYSWLVDS----YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAER 496
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
I +M+ GM D V YT+ ++ + A + +EM ++ L Y
Sbjct: 497 IFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/530 (21%), Positives = 209/530 (39%), Gaps = 49/530 (9%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P F +R + + AL +D SP++ ++D Y ++ A
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R++ +I +N L+N N D+ L + N+ G D +Y +LK+ C
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Query: 336 LAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
E + EV+ L A+ D T++TIV A++V + M
Sbjct: 368 -------GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G + +T+SS+++ + G V+ A+ L + GC+P++ +L+ Q++RA
Sbjct: 421 GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480
Query: 453 FRLFRSWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNS 500
L S V G DR + M T N + +
Sbjct: 481 EELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDG 540
Query: 501 --HYSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ S D KP T+N L+K C + + LM M P+
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD 600
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +I + G + A++ LKIM E+G P+ Y+ + +++ + + A L
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M + P+L+TY T++ ++ G + E L V M G + T + L
Sbjct: 661 GMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRV---MVSNGLCPDTTTYRSLA---- 711
Query: 668 EGVIQDKNQNQGEVTLCRRTNSQ--RPQSLLLEKVAVHLQKSAAENLAID 715
GV ++ ++ V + RR P + V + + +LAID
Sbjct: 712 YGVCREDGTDRA-VRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 56/312 (17%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG A + +YN ++ C AG A+ + + D FT++ +++
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP-------FPPDTFTFNPLIRALCVRG 265
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL V +DML G +P+ +T+S L++A QAM L +EM GCEP+ N
Sbjct: 266 RIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+L+ A D A + ++N P
Sbjct: 326 VLINAMCNEGDVDEALNI----------------------------------LSNLP--- 348
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
SH KP TY ++K+ C + V+ L+ EM + +P+ +++ ++
Sbjct: 349 --SH--------GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G V+ A++++ M E G D+V Y++ + R+ A L +K Y +
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458
Query: 616 PNLVTYITLLRA 627
P+ + Y T+L+
Sbjct: 459 PDTIAYTTVLKG 470
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 33/288 (11%)
Query: 412 GLVEQAMHLFEEMLQAG---CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G +++A+ LF+ M G C P C NIL++ + A R+F + S T V
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPC-NILIKRLCSDGRVSDAERVFAALGPSATVVTY 222
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH------------------YSSFDKRF- 509
+G R +E D + + N F P++ + FD
Sbjct: 223 NTMVNGYC-RAGRIE--DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279
Query: 510 -SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ TY+IL+ A C + Y + AL++EMR G P+ +++ +LI+A G+V+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL IL + G PD V YT +K S+R K+ L EM P+ VT+ T++
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ + G V + + V M + G A+ +++ C+ G + D
Sbjct: 400 SLCQQGL---VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 139/337 (41%), Gaps = 57/337 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V + M + G D+ +YN ++ C A E+ +++ K D+ T++T
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP----DIVTFNT 571
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K W+ A ++ +M+ + P+ +T++++I + GL+ QA+ + M + G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS +I++ A ++A + A L T
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMT---------------------------- 663
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLS 545
TP+ + TYN ++ T +++ ++ +R + GL
Sbjct: 664 --NGTPDLI-------------------TYNTVISN-LTKAGKMEEALDLLRVMVSNGLC 701
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L + A+++L+ +++ G+SPD Y + R +R A
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F M P+ TY+ LL A + G L E ++ LA
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 10/214 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P ++ F + +K L A+ ++ PN ++D G K++A
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG---KAQA 654
Query: 278 IYEDLRS-QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
E L N T ++ +N++++ A ++ L++ + M G+ D +Y L
Sbjct: 655 ALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGV 714
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C T A + ++ ++ G L D Y+ ++ F + +A+ M+S+G
Sbjct: 715 CREDGTDRAVRM---LRRVQDTG-LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGC 770
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
P+ T+ L+ A A GL+++A L + G
Sbjct: 771 MPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 172/402 (42%), Gaps = 56/402 (13%)
Query: 283 RSQNVTLNIYVFN----SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
R + +++ +N +L NA L + E ++ MQ+ G D +Y+I+L+ C AG
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAY--EKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPN 397
A+E+ G+++ GV KL+V TYS ++ A AL++ + M G P+
Sbjct: 88 ELDKAKELLGQLRE---SGV-KLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SL+ + + +A LFE M +AGCEPN + LL +A + D A RL+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 458 SWT--------LSKTQVALG--------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ T G E D ++ D + + +
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 502 YS----------------------SFDKRFS--FKPTTTTYNILMKACC-----TDYYRV 532
++ +F++ S P+ +N L+ A C D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
M M+ PN ++ I++D + ++ A +++ M G+SPDVV Y+ +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +L +A L EEM + P+ T ++L A S+ G +
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 21/392 (5%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VM 321
G+C G+ K++ + LR V LN+ ++ +++ A + LE++K M G +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ ++N LLK C +G + E + +++ AK + +V +YST++ A
Sbjct: 142 PDVVTFNSLLKGLC-SGERM--SEAFVLFEYM-AKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL- 440
A ++ E+M+ P+ + ++S + A V +A +M+ G + ++ + ++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 441 ----QACVEACQFDRAFRLFRSWTLSKT----QVALGEDYDGNTDRISNMEHKDKQSITN 492
+ E Q L RS L + + + ++ + + + + H +S
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS-KR 316
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
P+ V K F P TYNI++ C + L+NEM GLSP+ ++
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ L+D G ++ A +L+ M ++G+ PD + + ++ ++ A S E MK
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P+LVTY TLL + G + E LA
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 142/368 (38%), Gaps = 61/368 (16%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+E++ S+N + +FN+L++ D + K+M++ ++ +YNI++
Sbjct: 289 FEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN 348
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A AQE+ E+ A L DV TYS +V A + E+M G
Sbjct: 349 LCKAKQLDEAQELVNEM----ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P++ T +S++NA + AG V+ A+ E M G P+ N LL +A + D A
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+K P
Sbjct: 465 TFLAKMVAAKCT-----------------------------------------------P 477
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y I++ A C A+ EM G+ P+ + + L+D +G + AL++L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K PD V + + ++ + + A + E M + TYI ++R +
Sbjct: 538 KTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594
Query: 632 GSLHEVQQ 639
G + + +Q
Sbjct: 595 GKVDKARQ 602
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 185 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 298
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 415
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 416 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 182/432 (42%), Gaps = 46/432 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 30 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 79
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 135
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 136 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 195
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T+N L+ A + V+A L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G +
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDGVPPD 431
Query: 656 DTYLKELIEEWC 667
L++ C
Sbjct: 432 IMTYSILLDGLC 443
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 165/360 (45%), Gaps = 17/360 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 257
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 373
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 374 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 427
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LF + ++PN+VTY T++ S S +Q+ A+ + M + G N LI
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 404
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 405 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 496
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 497 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 536
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 537 SGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ C + AL+ +M +G P+ ++ + L++ + A+ ++ M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD + +TT I + +A +L + M QPNLVTY ++ + G
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG-- 201
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + M A +A+ +I+ C+
Sbjct: 202 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 234
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 194/467 (41%), Gaps = 35/467 (7%)
Query: 216 IVPRAD--ILFCNFVREFG-----KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
++PR+ + F VR FG K + L +++ + P +++ ++
Sbjct: 8 VLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVR 67
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMAS 326
G Y + +++ L S+ +T +I L+N H L F + + K+G +M +
Sbjct: 68 MGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVT 127
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N L+ C+ G A + L AKG LD F+Y +++ + AL++
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLD---LMAKGY-PLDEFSYGSLINGLCKNGQTRDALQLL 183
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M V PN IT+S++I+ L+ A+ LF + G + N L+ C
Sbjct: 184 QKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSV 243
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
Q+ A RL +DY N + + K+ + + ++
Sbjct: 244 GQWREATRLLTMMVRGNIN---PDDYTFNI--LVDALCKEGRIVE------AQGVFAVMM 292
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KR KP TYN LM+ C + + L N M GL P+ +++ +LI+ V
Sbjct: 293 KRGE-KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ + K +R + P++ Y + I + R+ L +EM P++VTY
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411
Query: 625 LRARSRYGSLHEVQQCL-AVYQDMWKAGYKANDTYLKELI-EEWCEG 669
L A + + + Q +W D Y+ ++I E +C+G
Sbjct: 412 LDAFCKSKPYEKAISLFRQIVQGIWP------DFYMYDVIVENFCKG 452
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 161/419 (38%), Gaps = 98/419 (23%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTL 289
G+ RD AL+ ++ L PN+ T+ID G+C D + + A+ + + S+ + +
Sbjct: 174 GQTRD---ALQLLQKMEEDLVRPNLITYSTVID--GLCKDRLIADALRLFSLVTSRGILV 228
Query: 290 NIYVFNSLM----------------------NVNAHDLKFTL---------------EVY 312
++ +NSL+ N+N D F + V+
Sbjct: 229 DVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVF 288
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M K G D+ +YN L++ CL+ N A+E++ + K L+ DV Y+ ++
Sbjct: 289 AVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM----VKRGLEPDVLNYNVLING 344
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A+ + +++ + PN T++SLI+ G + L +EM G P+
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG--EDYDGNTDRISNMEHKDKQSI 490
NI L A ++ +++A LFR Q+ G D+ + N +K I
Sbjct: 405 IVTYNIFLDAFCKSKPYEKAISLFR-------QIVQGIWPDFYMYDVIVENFCKGEKLKI 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
++L+ CC PN +
Sbjct: 458 AE----------------------EALQHLLIHGCC-------------------PNVRT 476
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+TI+I+A + + A+ +L M ++ PD V + T I +A L EM
Sbjct: 477 YTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 166/406 (40%), Gaps = 52/406 (12%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADM 324
G+C + AI + L++ N+ FNSLMN A + E++ M++ G AD+
Sbjct: 287 GLCQAHRLEEAI-QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YNILLK C E Y V+ + +V T+ST+++ +A A +
Sbjct: 346 ITYNILLKGLC---KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWE 402
Query: 385 VKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--------------- 428
V E M++ G++PN T++ L+ AG + FE+ML+
Sbjct: 403 VYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVD 462
Query: 429 ------CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG--NTD 477
C P N L+ ++ A L LS + DG
Sbjct: 463 FLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQ 522
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
RI + + K+++ +P TY+ L+ +AL
Sbjct: 523 RILDAHNVFKRALER-----------------GCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M +G N ++++ ++D G +E A+ +L+ MR+ G PD V Y T I +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+RL++A L EM P++VTY TL R G E + L
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 189/433 (43%), Gaps = 53/433 (12%)
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGN 339
R++ + N+ F++L+ NA + EVY+ M + G+ + +Y LL+ C AG+
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Query: 340 TVLAQEIYGEVKHLEAKG-----------------VLKLDVFTYSTIVKVFADAKWWQMA 382
+ ++ + ++ E + V + + TY+T+V + + + A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + E M+ +G++P+ IT++S+++ + A ++F+ L+ GC PN + L+
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552
Query: 443 CVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDR--ISNMEHKDKQSITN 492
+ + D A +L R+ T++ + V G G + + + +D + +
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612
Query: 493 TPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ N+ F KR F P+ TY L C + +
Sbjct: 613 AVTY--NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 670
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCV 594
++ M G +PN I+++ ++D +G V AL K+ R++ ++P V+AY+ I
Sbjct: 671 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 730
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++ R+ +A+ E M P++VT+ L+ G + L ++ M + G KA
Sbjct: 731 KAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG---RIDTGLELFCGMAERGCKA 787
Query: 655 NDTYLKELIEEWC 667
+ +I +C
Sbjct: 788 DIYAYNAMINAYC 800
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 176/432 (40%), Gaps = 76/432 (17%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V K +L A +D+ + SPN +ID G+C A+ LR +N
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALID--GLCKAGKLDIALGL-LRDKNS 274
Query: 288 TLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ F+SL++ AH L+ +++ K M + ++ +N L+ C A A E
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFE 331
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSL 404
++ +K DV TY+ ++K + A + E M + G +PN +T+S+L
Sbjct: 332 LFDVMKESGCSA----DVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 405 INACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
I NAG V QA ++E M+ G PN LL+ +A R + F
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE------ 441
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
M ++ +S ++ P P + +PT TYN L+
Sbjct: 442 -----------------QMLEREWRSSSSWPIHSPEVDFLMVQ---VCRPTLVTYNTLV- 480
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
GLS SG V AL +L+ M E G+SPDV
Sbjct: 481 ------------------TGLSK--------------SGMVRDALGLLEFMIESGLSPDV 508
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + + + + +R+ A ++F+ +PN+VTY TL+ S+ + E Q LA
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA- 567
Query: 644 YQDMWKAGYKAN 655
M + G +AN
Sbjct: 568 --KMVELGCRAN 577
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 123/314 (39%), Gaps = 55/314 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
M +YN+L+ C AG A + + + V TYST++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFG----FRPTVVTYSTVIDGLCRDNEVDKGC 56
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K+ E+M G PN +T+++L+NA G ++A L E M GC P ++++
Sbjct: 57 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGL 116
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + + AFR+ D DR
Sbjct: 117 CKEGEIEAAFRVV----------------DEMVDR------------------------- 135
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGG 560
F P + +L+ A C + RV ++ +G +P+ +++ ++D
Sbjct: 136 ------GFVPDVEIHTVLLHALC-ELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK 188
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A +L+++ E SP V +T A+ ++ L A+ F+ M + PN VT
Sbjct: 189 AGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVT 248
Query: 621 YITLLRARSRYGSL 634
Y L+ + G L
Sbjct: 249 YDALIDGLCKAGKL 262
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 45/378 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ M G + +Y+ ++ C AG E G + + V+ V YS
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVT---EALGYFEKMARDEVVAPHVIAYSA 724
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A A + E M+ AG P+ +T+S LIN +AG ++ + LF M + G
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALG---EDYDGNTDRISNM 482
C+ + N ++ A +F A+ L ++ ++K V G + GN DRI
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN-DRIDEA 843
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
V H D R +YN L+ + +A L+ M
Sbjct: 844 --------------VSYFHSIPEDCR-----DEISYNTLITSLVASRRSEQALELLRAMV 884
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G SP+ ++ ++D +G+ E A ++L+ MR G SPD+ YT I ++K+L
Sbjct: 885 ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK----AGYKAND 656
A FEEM ++P+ + Y +L+ A + + D WK +G +
Sbjct: 945 LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKV----------DDAWKLLRSSGIEPTI 994
Query: 657 TYLKELIEEWCEGVIQDK 674
T +++ C+ DK
Sbjct: 995 TMYSTMVDSLCKNRGTDK 1012
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 29/359 (8%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+++ V M G + D+ + +LL A C G A + +V + D
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG----FTPDA 176
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T+V A + A V + + + +P T++ ++ + AG + A F+
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M Q G PN+ + L+ +A + D A L R A G
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQ-----A 291
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
H+ +++I K P +N LM C +A L + M+
Sbjct: 292 HRLEEAI-------------QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLK 600
G S + I++ IL+ + A + +++MR +G SP+VV ++T I+ + R+
Sbjct: 339 SGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVN 398
Query: 601 QAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
QA+ ++E M + I PN TY LL + G ++QC ++ M + ++++ ++
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC---FEQMLEREWRSSSSW 454
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 184/433 (42%), Gaps = 41/433 (9%)
Query: 253 SPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--T 308
SP++ +++D G+C + + + +++ + N+ +++L++ + K
Sbjct: 505 SPDVITFNSVLD--GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ M +LG A+ +Y+ ++ G A + ++ + G L D TY+T
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV---LRQMRDAGCLP-DAVTYNT 618
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + A+ + +ML AG P+ +T+++L + +G ++A+ + + M G
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF----RSWTLSKTQVALGEDYDG--NTDRISNM 482
C PN+ + ++ +A + A F R ++ +A DG RI
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738
Query: 483 EHKDKQSI--TNTPNFVPNS-------HYSSFDKRFSF---------KPTTTTYNILMKA 524
++ I P+ V S D K YN ++ A
Sbjct: 739 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINA 798
Query: 525 CC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C ++ AL+ EM+T G++ N ++ I+I A G+ ++ A+ + ED D
Sbjct: 799 YCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRD 856
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++Y T I V S+R +QA L M P+ Y+T++ + GS + L
Sbjct: 857 EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL- 915
Query: 643 VYQDMWKAGYKAN 655
Q+M G+ +
Sbjct: 916 --QEMRSRGHSPD 926
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 177/419 (42%), Gaps = 52/419 (12%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
R+ VT + V + L+ V ++ + V + M+ G + D +YN L+
Sbjct: 575 RANTVTYST-VVDGLLKVGR--MEDAVVVLRQMRDAGCLPDAVTYNTLIDG--------- 622
Query: 343 AQEIYGEVKHLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ + EA G+L+ V TY+T+ + + A+++ + M + G
Sbjct: 623 ---FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAF 453
PN IT+SS+++ AG V +A+ FE+M + P+ + L+ +A + D A+
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739
Query: 454 ----RLFR--------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
R+ R ++++ + D + M + ++ N + N++
Sbjct: 740 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799
Query: 502 ---------YSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS-PNHI 549
Y+ + K T T+ I++KA C + R+ ++ ++ + I
Sbjct: 800 CLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN-DRIDEAVSYFHSIPEDCRDEI 858
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ LI + S E AL++L+ M DG SPD Y T + ++ + A L +EM
Sbjct: 859 SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEM 918
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ P+L TY ++ S+ ++ +++M + K + LI+ +C+
Sbjct: 919 RSRGHSPDLRTYTIMISGLSK---AKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 171/399 (42%), Gaps = 46/399 (11%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKF 307
+PN +I+D G+C G ++ +E + R + V ++ +++L++ A +
Sbjct: 680 APNAITYSSIVD--GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E + M + G + D+ +++IL+ C AG E++ + A+ K D++ Y+
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM----AERGCKADIYAYN 793
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + A + E+M + G+ NT+T +I A +++A+ F + +
Sbjct: 794 AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ S N L+ + V + + ++A L R+ VA G G+ D + M D
Sbjct: 854 CRDEISY--NTLITSLVASRRSEQALELLRA------MVADG----GSPDACNYMTVMDG 901
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK----------ACCTDYYRVKALMN 537
+P + S P TY I++ AC DY+
Sbjct: 902 LFKAGSPEVAAKLLQEMRSRGHS--PDLRTYTIMISGLSKAKQLPLAC--DYF------E 951
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM L P+ I ++ LIDA + V+ A K++R G+ P + Y+T + +++
Sbjct: 952 EMLRKNLKPDAIVYSSLIDAFCKADKVDDAW---KLLRSSGIEPTITMYSTMVDSLCKNR 1008
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+A + EMK +P + + +L A G + E
Sbjct: 1009 GTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDE 1047
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+++F K +F F+PT TY+ ++ C D K L+ EM G +PN +++ L++A
Sbjct: 21 FTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 80
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G G + A +L+ M +G P+++ + IK + ++ AF + +EM P+
Sbjct: 81 LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140
Query: 618 LVTYITLLRARSRYGSLHEV----QQCLAV--------YQDMWKAGYKAN 655
+ + LL A G + E QQ L + Y M YKA
Sbjct: 141 VEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAG 190
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 119/328 (36%), Gaps = 66/328 (20%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ A A + G P +T+S++I+ V++ L EEM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
GC PN+ N L+ A + + AF L
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLL---------------------------- 94
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-----YYRVKALMNEM 539
++ + P P T+ +++K C + +RV ++EM
Sbjct: 95 -ERMAANGCP------------------PELITFGLIIKGLCKEGEIEAAFRV---VDEM 132
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ T+L+ A G V+ A + + G +PD V Y T + ++ RL
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ A + + + P + T+ + S+ G+L + + M + G N
Sbjct: 193 EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYE---FFDSMPQTGVSPNTVTY 249
Query: 660 KELIEEWCE--------GVIQDKNQNQG 679
LI+ C+ G+++DKN G
Sbjct: 250 DALIDGLCKAGKLDIALGLLRDKNSQAG 277
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
RA+ D S + + V + L + ++ L + M+ G D+ +Y I++
Sbjct: 881 RAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL--LQEMRSRGHSPDLRTYTIMISGLS 938
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A LA + + E+ + LK D YS+++ F A A K+ + S+G+
Sbjct: 939 KAKQLPLACDYFEEM----LRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIE 991
Query: 396 PNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +S+++++ C N G ++A+ + EM CEP L A V + D A +
Sbjct: 992 PTITMYSTMVDSLCKNRG-TDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050
Query: 455 L 455
L
Sbjct: 1051 L 1051
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 146/357 (40%), Gaps = 29/357 (8%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y+ + L K GR++E +E ++ + +++ ++ +G+ + GRID +
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMI----RAGRIPDVVTFSILINGLCDA---GRIDTGL 774
Query: 134 GVLKKLNELGV-APLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
+ + E G A + ++ ++ C + GE L+E ++ + +
Sbjct: 775 ELFCGMAERGCKADIYAYNA----MINAYCLK----GEFSAAYALLEEMKTHGIAKNTVT 826
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVP---RADILFCNFVREFGKKRDLVSALRAYDASKK 249
I LC N ++ A+ Y +P R +I + + R AL A
Sbjct: 827 HGIVIKALCGND-RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVA 885
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
SP+ T++D G + + +++RS+ + ++ + +++ A L
Sbjct: 886 DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPL 945
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ ++ M + + D Y+ L+ A C A ++ K L + G+ + + YS
Sbjct: 946 ACDYFEEMLRKNLKPDAIVYSSLIDAFCKA------DKVDDAWKLLRSSGI-EPTITMYS 998
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+V + AL+V +M S P W+SL A G V++A+ L ++
Sbjct: 999 TMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 123/542 (22%), Positives = 226/542 (41%), Gaps = 55/542 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K D+ L ++ K SP ++I +ID G+C + +++++ ++ + +
Sbjct: 564 KLSDVGKGLELFNRMKHDRISPTVFIYNVLID--GLCKVRQMKDAEQLFDEMLARRLLPS 621
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ D + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 622 LITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLT 681
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K +G + D FT+S + ++ AL V E + +G+ N T S L+NA
Sbjct: 682 EMKD---QGFVP-DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G +E+A + + G PN N ++ A +
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797
Query: 461 -----LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
L +T LG D + ++ M+ K T N + + FDK F
Sbjct: 798 LAYNCLIRTFCELG-DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLK 856
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SPN + +LID C G
Sbjct: 857 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKG 916
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + + M + G+ ++V Y T I + +L +A + E+ ++P++ TY
Sbjct: 917 KIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYN 976
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
+L+ S Y VQ+C+A+Y++M +G K LI + I+ + GE++
Sbjct: 977 SLI---SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMS 1033
Query: 683 LCRRTNSQRPQSLLLEKV----AVHLQKSAAENLAIDL----RGLTKVEARIIVLAVLRM 734
L +P L+ V AVH A NL + GL K ++L L++
Sbjct: 1034 L-------QPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 1086
Query: 735 MK 736
K
Sbjct: 1087 GK 1088
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 184/479 (38%), Gaps = 85/479 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP ++L+ + + +K DLV A DA +K P+ +I GD +
Sbjct: 758 LVPN-EVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENA 816
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
++ + V+ ++ +N L+ +F ++ K M+ G M ++ SY L+
Sbjct: 817 EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINC 876
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ +L +I VK DM G
Sbjct: 877 LC-KGSKLLEAQI--------------------------------------VKRDMEDRG 897
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ--------ACVE 445
V+PN ++ LI+ C + G +E A EEM + G E N N L+ A E
Sbjct: 898 VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAE 957
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ + + + + + G + GN R + + K S
Sbjct: 958 DMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTS---------------- 1001
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KPT TY++L+ C + + K + EM L P+ + + ++ G++
Sbjct: 1002 ----GIKPTLKTYHLLISLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDM 1054
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + K M E + D Y + I ++ +L + SL +EMK +++P TY +
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKAN----DTYLKELIEEW----CEGVIQDKN 675
++ + + + Y++M + G + D + L EEW E VI + N
Sbjct: 1115 VKG---HCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMN 1170
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 583
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ + + A ++ ++ML+ + P+ IT+++LI+ G E++
Sbjct: 584 SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ LF++ + + L
Sbjct: 644 VRERMKADNIEPSLITFNTLLKG------------LFKAGMVEDAENVL----------- 680
Query: 480 SNMEHKDKQSITNTPNF-VPNSHYSSFDK------------RFSFKPTTTTYNILMKACC 526
E KD+ + + F + YSS DK K T +IL+ A C
Sbjct: 681 --TEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ KA ++ GL PN + + +ID G++ GA + M + GM PD +
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
AY I+ ++ A +MK + P++ TY L+ YG +E +C +
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDLL 855
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
++M G N LI C+G
Sbjct: 856 KEMEDNGTMPNVVSYGTLINCLCKG 880
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R G+ P+ S T+L+D + + + + E P Y AI+ V+
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + LF MKH +I P + Y L+ + + + +Q
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQ 608
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 43/417 (10%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++++ +N+ N +N+L++ ++ L + M++ V ++ +YN LL
Sbjct: 211 ARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270
Query: 333 ACCLAGNTVLAQEIYGEVK----------------HLEAKG--------VLKLDVFTYST 368
C +G A+E+ E++ H G +++D TY
Sbjct: 271 GLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI 330
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A +V ++ GVTP+ I+++ L+NA G V++A+ E+M + G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EPN N ++ E + D A +W + + + I+ K
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHA----ETWVRRMVEKGVSPTVETYNSLINGYGQKG-- 444
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+FV + + KP +Y L+ C D + A ++ +M G+SP
Sbjct: 445 ------HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +LI+A ++ A + M + G+ +V Y T I R+ R+K+A LF
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+M P+++TY +L+ S Y Q+CL +Y M G K LI
Sbjct: 559 LQMAGKGCNPDVITYNSLI---SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI 612
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 184/448 (41%), Gaps = 49/448 (10%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
H+S P + ++ +C + ++ +Y +R + N L+ V++ +
Sbjct: 83 HVSKP--FFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEK 140
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
TL V+ ++ G D +Y ++A + + E+ +K + G + VF Y+
Sbjct: 141 TLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL---MKSMVKDG-MGPSVFAYN 196
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + A K+ ++M+ + PNT+T+++LI+ G +E+A+ E M +
Sbjct: 197 LVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRL-------------FRSWTLSKTQVALGED--Y 472
E N N LL + + D A + F S+ G+D +
Sbjct: 257 NVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLF 316
Query: 473 DGNTDRISNMEH-----------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
DG RI + + +++ V N P+ +YNIL
Sbjct: 317 DGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN----------GVTPSKISYNIL 366
Query: 522 MKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A C + KA++ +M GL PN I++ +I +G V+ A ++ M E G+
Sbjct: 367 VNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGV 426
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
SP V Y + I + + F +EM I+PN+++Y +L+ + L + +
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWC 667
LA DM G N LIE C
Sbjct: 487 VLA---DMIGRGVSPNAEIYNMLIEASC 511
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 179/426 (42%), Gaps = 37/426 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C G K+ + L VT + +N L+N D+K + + M++ G+
Sbjct: 334 GLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEP 393
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ ++N ++ C G A+ V+ + KGV V TY++++ + +
Sbjct: 394 NRITFNTVISKFCETGEVDHAETW---VRRMVEKGV-SPTVETYNSLINGYGQKGHFVRC 449
Query: 383 LKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ ++M AG+ PN I++ SLIN C + L++ + + +M+ G PN++ N+L++
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI-VLADMIGRGVSPNAEIYNMLIE 508
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNT 493
A + AFR F S L G +G + ++ + N
Sbjct: 509 ASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNP 568
Query: 494 PNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCTD-YYRVKALMN 537
NS S + K KPT T++ L+ AC + + +
Sbjct: 569 DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQ 628
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM + L P+ + +I + GNV A+ + + M + G+ D V Y + I +R +
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
R+ + L ++MK + P + TY L++ L + Y++M + G N +
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLC---DLKDFNGAYFWYREMVERGLLLNVS 745
Query: 658 YLKELI 663
+LI
Sbjct: 746 MCYQLI 751
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 192/468 (41%), Gaps = 58/468 (12%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNE-CQRLLDSGEVEMFVGLMEVLEE 183
R GRI+ VL KL E GV P ++ + +L N CQ G+V+ + E +EE
Sbjct: 337 RVGRIEKAEEVLAKLVENGVTPSKI----SYNILVNAYCQ----EGDVKKAILTTEQMEE 388
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYA------CIVPRADILFCNFVREFGKKRDL 237
L + I + C +V+ A + + P + + + + +G+K
Sbjct: 389 RGLEPNRITFNTVISKFC-ETGEVDHAETWVRRMVEKGVSPTVET-YNSLINGYGQKGHF 446
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFN 295
V D K PN+ ++I+ +C D + + + D+ + V+ N ++N
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINC--LCKDRKLIDAEIVLADMIGRGVSPNAEIYN 504
Query: 296 SLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L+ + LK + M + G+ A + +YN L+ G A++++ +
Sbjct: 505 MLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF---LQM 561
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
KG DV TY++++ +A + Q L++ + M G+ P T+ LI AC G+
Sbjct: 562 AGKGC-NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V +F+EMLQ P+ N ++ + E + ++ +L + V G D D
Sbjct: 621 VTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGN------VMKAMSLHQQMVDQGVDCD 673
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYR 531
T + + + ++ + V + K P TYNIL+K C D+
Sbjct: 674 KVTYNSLILAYLRDRRVSEIKHLVDDM------KAKGLVPKVDTYNILIKGLCDLKDFNG 727
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
EM GL +L NV Q++ +RE+GM
Sbjct: 728 AYFWYREMVERGL--------LL--------NVSMCYQLISGLREEGM 759
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L + MR G P+ S L+ S + E L + + + G PD VAY A++ V
Sbjct: 109 LYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAV 168
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
K L + F L + M + P++ Y +L + + ++ ++ +M +
Sbjct: 169 MLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCK---VRRIKDARKLFDEMIQRNMVP 225
Query: 655 NDTYLKELIEEWCE 668
N LI+ +C+
Sbjct: 226 NTVTYNTLIDGYCK 239
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 176/427 (41%), Gaps = 63/427 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 127 PDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + ++ Y+ ++ A C L E YG + KG+ DV TYST+
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALC---KYQLVSEAYGLFSEMTVKGI-SADVVTYSTL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + PN T++ L++A G V++A + ML+A
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ + L+ + +A +F + +L
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL---------------------------- 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C + +AL EM + P
Sbjct: 333 -------------------MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LID SG + ++ M + G +V+ Y++ I ++ L +A +LF
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+MK I+PN T+ LL + G L + Q+ V+QD+ GY N +I+ C
Sbjct: 434 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE---VFQDLLTKGYHLNVYTYNVMIDGHC 490
Query: 668 -EGVIQD 673
+G++++
Sbjct: 491 KQGLLEE 497
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 171/408 (41%), Gaps = 62/408 (15%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + L+ D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 172 NGVCKIGDTRAAIKLLQKIDG---RLTKPNVVMYSTIIDA--LCKYQLVSEAYGLFSEMT 226
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +++L+ LK + + M + ++ +YNIL+ A C G
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K DV TYST++ + + A V M GVTP+ T+
Sbjct: 287 EAKSVLA----VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN +V++A++LF+EM Q P + L+ ++ R+ W
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC------KSGRIPYVW-- 394
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D I M + + + TY+ L
Sbjct: 395 ---------------DLIDEMHDRGQPA------------------------NVITYSSL 415
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + R AL N+M+ G+ PN ++TIL+D G ++ A ++ + + G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+V Y I + L++A ++ +M+ P+ VT+ ++ A
Sbjct: 476 HLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 66/378 (17%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
LE KG+ + D+ T + ++ F V +L G P+T+T ++LI G
Sbjct: 85 LELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQV---- 466
V++A+H +++L G + N L+ + A +L + L+K V
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYS 203
Query: 467 --------------ALGEDYDGNTDRISN-------------MEHKDKQSI--------- 490
A G + IS +E K K++I
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263
Query: 491 TNTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----------DYY-------RV 532
T PN + N + K K + +++KAC D Y +
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + N M +G++P+ ++TILI+ + V+ AL + K M + M P +V Y++ I
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQP-NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S R+ + L +EM H + QP N++TY +L+ + G L + +A++ M G
Sbjct: 384 LCKSGRIPYVWDLIDEM-HDRGQPANVITYSSLIDGLCKNGHL---DRAIALFNKMKDQG 439
Query: 652 YKANDTYLKELIEEWCEG 669
+ N L++ C+G
Sbjct: 440 IRPNTFTFTILLDGLCKG 457
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 52/279 (18%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
LE KG+ + D+FT + ++ F + +L G P+TIT+++LIN G
Sbjct: 952 LELKGI-QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKG 1010
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A+H +++L G + N L+ + A +L R
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR--------------- 1055
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D R + KP YN ++ A C
Sbjct: 1056 -------------------------------KIDGRLT-KPDVVMYNTIIDALCKHQLVS 1083
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA L EM G+S + +++ LI G ++ A+ +L M ++P+V Y +
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILV 1143
Query: 591 KVCVRSKR--LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + L ++ S+ +M+ + N VT+ ++ A
Sbjct: 1144 DALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I+ G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 994 PDTITFTTLIN--GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 1051
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + D+ YN ++ A C L + YG + KG+ DV TY+T+
Sbjct: 1052 KLLRKIDGRLTKPDVVMYNTIIDALC---KHQLVSKAYGLFFEMNVKGI-SADVVTYNTL 1107
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG--LVEQAMHLFEEMLQA 427
+ F + A+ + M+ + PN T++ L++A G L+++++ + +M
Sbjct: 1108 IYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDN 1167
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFR 457
GC+ N+ I++ A E + D+ +L
Sbjct: 1168 GCKANAVTFEIIISALFEKDENDKVEKLLH 1197
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC+ P I + + + ++ A ++A +P+++ +I+ G C + M
Sbjct: 298 ACVKPDV-ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 274 KSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ ++++ +N+ I ++SL++ + + + ++ M G A++ +Y+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G+ A ++ ++K +G+ + + FT++ ++ + A +V +D+
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKD---QGI-RPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L+ G N T++ +I+ GL+E+A+ + +M GC P++ I++ A
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P T T+ L+ C KAL +++ G N +S+ LI+ G+ A
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++L+ + PDVV Y T I + + + +A+ LF EM I ++VTY TL+
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 628 RSRYGSLHE 636
G L E
Sbjct: 1111 FCIVGKLKE 1119
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++ L + + +++ N L+N H + F + + K G D ++
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 330 LLKACCLAG---------NTVLAQE-----------IYGEVKHLEAKGVLKL-------- 361
L+ CL G + +LAQ I G K + + +KL
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 362 ---DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
DV Y+TI+ + A + +M G++ + +T+++LI G +++A+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 419 HLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
L +M+ PN + NIL+ A C E
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEG 1150
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 107/301 (35%), Gaps = 52/301 (17%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K + A+ + + G+ P+ T + LIN + G + + ++L+ G P++
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ Q ++A F L++
Sbjct: 1000 TTLINGLCLKGQVNKALH-FHDKLLAQ--------------------------------- 1025
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
F+ +Y L+ C D L+ ++ P+ + + +
Sbjct: 1026 -------------GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI-KVCVRSKRLKQAFSLFEEMKHYQ 613
IDA V A + M G+S DVV Y T I C+ K LK+A L +M
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK-LKEAIGLLNKMVLKT 1131
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
I PN+ TY L+ A + G + + L++ M G KAN + +I E D
Sbjct: 1132 INPNVRTYNILVDALCKEGK-DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEND 1190
Query: 674 K 674
K
Sbjct: 1191 K 1191
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 18/191 (9%)
Query: 495 NFVPNSHYS---SFDKRFSFK---PTTTTYNILMKACC-----TDYYRVKALMNEMRTVG 543
+F HYS S R K P T NIL+ C T + V A ++ G
Sbjct: 68 SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA---KILKRG 124
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ ++ LI G V+ AL + G + V+Y T I + + A
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L +++ +PN+V Y T++ A +Y V + ++ +M G A+ LI
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKY---QLVSEAYGLFSEMTVKGISADVVTYSTLI 241
Query: 664 EEWC-EGVIQD 673
+C EG +++
Sbjct: 242 YGFCIEGKLKE 252
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 12/189 (6%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMK--ACCTDYYRVKALMNEM 539
H SI N + V S F++ + P +N ++ A Y +L + +
Sbjct: 31 HSQPPSIQNVDDAV-----SQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I+ ILI+ G + +L + + G PD V T IK ++
Sbjct: 86 ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
K+A +++ Q N V+Y TL+ + G + + + + Q + K N
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG---DTRAAIKLLQKIDGRLTKPNVVMY 202
Query: 660 KELIEEWCE 668
+I+ C+
Sbjct: 203 STIIDALCK 211
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 164/393 (41%), Gaps = 66/393 (16%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP + F + K DL SA K +P++Y + G+C G
Sbjct: 275 VPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQ--GLCKAGRIQD 332
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++E++R + V N VF +L ++AH ++ LE+++ M G+ D+ +YN L
Sbjct: 333 AVEMFEEMRERGVNPNTVVFTTL--IDAHCKEGNVAAGLELHREMATRGIKTDLVAYNAL 390
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C + A +I E+++ LK D TY+T++ F MA+++K++M
Sbjct: 391 ANGLCRVRDLKAANDIVEEMRN----NGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
GV + +T+++LI+ + +G + + EM++AG EP++ +++ A +
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
F+L + M++K +
Sbjct: 507 TGFKLLKE-----------------------MQNKGR----------------------- 520
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP TYN++M C L+N M +G+ P+ I++ IL+D G V A
Sbjct: 521 -KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE 579
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ + GM D YT+ I V+ K K
Sbjct: 580 E---LKSAKGMVSDFGLYTSLINEFVKKKSTKS 609
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 153/405 (37%), Gaps = 59/405 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L V FN LM + + L ++ M + GV + ++N L+
Sbjct: 230 AFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGM 289
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + A + G L AK + DV+TY ++ A Q A+++ E+M GV
Sbjct: 290 CKASDLNSANALRG----LMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGV 345
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+ +++LI+A G V + L EM G + + N L C+
Sbjct: 346 NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGL---CRV----- 397
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
D D + M + KP
Sbjct: 398 ---------------RDLKAANDIVEEMRNN------------------------GLKPD 418
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+ C + A+ EM G++ + +++T LI SG + +IL
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILC 478
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G+ PD YT I ++ +K F L +EM++ +P +VTY ++ G
Sbjct: 479 EMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILG 538
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ L M G +D L++ C+ G ++D +
Sbjct: 539 QMKNADMLL---NAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE 580
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 105/278 (37%), Gaps = 55/278 (19%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV WS L+N + V +A + ++L AG P ++ N+L++ + + + A
Sbjct: 207 GVRVPLPAWSDLMNRLPS---VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASA 263
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+F R
Sbjct: 264 RNMFDEML-----------------------------------------------RRGVP 276
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT T+N LM C +D AL M G++P+ ++ + +G ++ A+++
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ MRE G++P+ V +TT I + + L EM I+ +LV Y L R
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCR 396
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +++ + ++M G K + LI+ +C+
Sbjct: 397 ---VRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCK 431
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 167/410 (40%), Gaps = 55/410 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ S + ++Y++ ++ DL E+ +M+ G ++ YN+L+ C
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E G K L K LK DV TY T+V + +++ L++ ++ML +
Sbjct: 274 KKQKV---WEAVGIKKDLAGKD-LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ SSL+ G +E+A++L + ++ G PN N L+ + + +F A L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKR 508
F DR+ + + PN V S D
Sbjct: 390 F--------------------DRMGKIGLR--------PNDVTYSILIDMFCRRGKLDTA 421
Query: 509 FSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF K + YN L+ C D + M EM L P +++T L+
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + AL++ M G++P + +TT + R+ ++ A LF EM + ++PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
VTY ++ G + + + L ++M + G + + LI C
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFL---KEMTEKGIVPDTYSYRPLIHGLC 588
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 194/491 (39%), Gaps = 95/491 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYE-----------DLRSQNVTLNIYVFNSLMNVN 301
SPN+++ +ID +C K R +E LR +VT +I + M
Sbjct: 364 SPNLFVYNALID--SLC----KGRKFHEAELLFDRMGKIGLRPNDVTYSILID---MFCR 414
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVL 359
L L M G+ + YN L+ C G+ A+ E+ K LE
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT--- 471
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
V TY++++ + AL++ +M G+ P+ T+++L++ AGL+ A+
Sbjct: 472 ---VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM + +PN N++++ E +AF + T
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT------------------- 569
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKALMNE 538
VP++ +S++P ++ C T K ++
Sbjct: 570 -------------EKGIVPDT--------YSYRP------LIHGLCLTGQASEAKVFVDG 602
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ N I +T L+ G +E AL + + M + G+ D+V Y I ++ K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
K F L +EM ++P+ V Y +++ A+S+ G E ++ M G N+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA---FGIWDLMINEGCVPNEVT 719
Query: 659 LKELIEEWCE-GVIQDKNQNQGEVTLCRRTN--SQRPQSL-------LLEKVAVHLQKSA 708
+I C+ G + N+ EV LC + S P + +L K V +QK+
Sbjct: 720 YTAVINGLCKAGFV-----NEAEV-LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 709 AENLAIDLRGL 719
+ AI L+GL
Sbjct: 774 ELHNAI-LKGL 783
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 181/448 (40%), Gaps = 41/448 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + K + ALR Y +P++Y T++ G + ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ NV N +N ++ D+ E K M + G++ D SY L+ CL G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ + H KG +L+ Y+ ++ F + AL V ++M+ GV + +
Sbjct: 593 ASEAK-VFVDGLH---KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ LI+ + L +EM G +P+ ++ A + F AF + W
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI---W 705
Query: 460 TL-----------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
L + T V G G + + K Q +++ PN V Y F
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK-MQPVSSVPNQVT---YGCF--- 758
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+IL K D + L N + GL N ++ +LI G +E A
Sbjct: 759 ---------LDILTKGE-VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ M DG+SPD + YTT I R +K+A L+ M I+P+ V Y TL+
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKAND 656
G E+ + + +M + G N+
Sbjct: 868 CVAG---EMGKATELRNEMLRQGLIPNN 892
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 184/450 (40%), Gaps = 26/450 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R A +D K PN +ID+ G + + ++ + L++Y
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 293 VFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N + D+ M + + +Y L+ C G A +Y E
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE- 497
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ KG+ ++T++T++ A + A+K+ +M V PN +T++ +I
Sbjct: 498 --MTGKGIAP-SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A +EM + G P++ L+ Q A ++F L K L E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVD-GLHKGNCELNE 612
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
Y G E K +++++ V Y +L+
Sbjct: 613 ICYTGLLHGFCR-EGKLEEALSVCQEMVQRG----------VDLDLVCYGVLIDGSLKHK 661
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D L+ EM GL P+ + +T +IDA +G+ + A I +M +G P+ V YT
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ + +A L +M+ PN VTY L ++ G + ++Q+ + ++ +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV-DMQKAVELHNAI 779
Query: 648 WKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
K G AN LI +C +G I++ ++
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRIEEASE 808
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 123/309 (39%), Gaps = 52/309 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T S ++ + + +A+++ DM+S G+ P+ ++ +I + + +A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M GC+ N N+L+ C+ + + V + +D G
Sbjct: 251 AHMEATGCDVNIVPYNVLIDG---LCKKQKVWE----------AVGIKKDLAG------- 290
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
KD KP TY L+ C ++ +M+EM
Sbjct: 291 ---KD------------------------LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ SP+ + + L++ G +E AL ++K + + G+SP++ Y I + ++
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LF+ M ++PN VTY L+ R G L L+ +M G K +
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL---DTALSFLGEMVDTGLKLSVYPY 440
Query: 660 KELIEEWCE 668
LI C+
Sbjct: 441 NSLINGHCK 449
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+++ + + K D A +D PN +I+ G+C G ++ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN--GLCKAGFVNEAEVL 739
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N + +++ D++ +E++ + K G++A+ A+YN+L++ C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ + + GV D TY+T++ + A+++ M G+
Sbjct: 799 RQGRIEEASEL---ITRMIGDGV-SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
P+ + +++LI+ C AG + +A L EML+ G PN++
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 187/447 (41%), Gaps = 46/447 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY- 312
PN+++ ++I+ G ++ ++ + + + N + L++ K + Y
Sbjct: 363 PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYY 422
Query: 313 -KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G+ A + SYN ++ C G +A+ ++ K + KG LK V TY++++
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF---KEMVDKG-LKPTVATYTSLIS 478
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M G+ PNT+T+++LI + +A LF+EM++ P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N+L++ RAF L + G D T R ++
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELL------DEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592
Query: 492 NTPNFVPNSH----------YSSFDKRF-------------------SFKPTTTTYNILM 522
F+ + H Y++ + F + +Y +L+
Sbjct: 593 EAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652
Query: 523 KACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R+ L+ EM G+ P+++ +TILID SGN++ A + IM +G P
Sbjct: 653 SGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVP 712
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ V YT + ++ + +A LF+ M + PN +TY L ++ G++ + L
Sbjct: 713 NSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNM---ENAL 769
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCE 668
++ M + + TY LI +C+
Sbjct: 770 QLHNAMLQGSFANTVTY-NILIRGYCQ 795
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 162/405 (40%), Gaps = 61/405 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A D K SP+ Y R +I G+C G +++ DL ++ L+ + +L
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLI--AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616
Query: 298 MNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ + +K L + M G+ D+ SY +L+ + +L + + + +
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELL----REMHG 672
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
KG ++ D Y+ ++ F + + A + M+ G PN++T+++L+N AG V
Sbjct: 673 KG-MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A LF+ ML PN L + + A +L
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL-------------------- 771
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK 533
H + F+ T TYNIL++ C +
Sbjct: 772 -------------------------HNAMLQGSFA---NTVTYNILIRGYCQIGKFQEAA 803
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M +G+ P+ I+++ I GNV+ A+ + + M + G+ PD V + I C
Sbjct: 804 KLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHAC 863
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ L +A L +M ++P TY +L+ ++ L +VQ
Sbjct: 864 CLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 188/473 (39%), Gaps = 40/473 (8%)
Query: 222 ILFCNFVREFG----------------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
+L N +R++G + R L +D P+ YI ++
Sbjct: 175 VLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKC 234
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
D+ K++ I +L+I +N +N + + +EV +++ + G+ AD
Sbjct: 235 LCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKAD 294
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y L+ C + E+ E+ L G + + S +++ + A
Sbjct: 295 LVTYCTLVLGLCRIQEFEVGMEMMDEMIEL---GYVPSEA-AVSGLIEGLIKMGSIEGAF 350
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + GV PN ++S+IN+ G +E+A LF M + G PN IL+
Sbjct: 351 ELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF 410
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ D AF F + Y N+ + N + K + F
Sbjct: 411 GRRAKLDVAFYYFNKMIECGISATV---YSYNS--MINCQCKFGKMKMAELLF-----KE 460
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
DK KPT TY L+ C D KA L +EM G++PN +++T LI
Sbjct: 461 MVDK--GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI 518
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ A ++ M E + P+ V Y I+ R +AF L +EM + P+ TY
Sbjct: 519 NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
L+ G + E ++ + D+ + ++ L++ +C EG I++
Sbjct: 579 RPLIAGLCSTGRVSEAKEFI---NDLHHKHQRLDELCYTALLQGFCKEGRIKE 628
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 167/412 (40%), Gaps = 41/412 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
+CG+C ++ +++++ + N +N L+ + + T E+ M K G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +Y L+ C G A+E ++ H + LD Y+ +++ F +
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR----LDELCYTALLQGFCKEGRIK 627
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL +++M+ G+ + ++++ LI+ N L EM G +P++ IL+
Sbjct: 628 EALVARQEMVGRGLQMDLVSYAVLISGALNQN-DRILFELLREMHGKGMQPDNVIYTILI 686
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+++ +AF W + +GE Y N+ + T N + +
Sbjct: 687 DGFIKSGNLKKAFEF---W-----YIMIGEGYVPNS-----------VTYTALVNGLFKA 727
Query: 501 HYSSFDKRFSFK--------PTTTTYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISW 551
Y + + + FK P TY + + AL ++ G N +++
Sbjct: 728 GYVN-EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTY 786
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILI G + A ++L +M GM PD + Y+T I + + A ++E M
Sbjct: 787 NILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQ 846
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++P+ V + L+ A G E+ + L + DM G K + L+
Sbjct: 847 RGLKPDRVVFNFLIHACCLNG---ELDRALQLRNDMMLRGLKPTQSTYHSLM 895
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 37/339 (10%)
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+L+ A G+ A+ + +K++ KG K V + + +++ + AK ++ A V
Sbjct: 147 MLVTAYGKLGDFSRAERV---LKYMNKKG-YKPSVISQTALMEAYGRAKQYRKAEAVFRR 202
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---QAGCEPNSQCCNILLQACVE 445
M ++G P+ +T+ ++ + ++A +FE++L +A +P+ + ++++ +
Sbjct: 203 MQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKK 262
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
A + +A +LF R LS ++ + +SN+
Sbjct: 263 AGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSNI------------------ 304
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
Y +R + KP +Y++L+KA +AL EM G+ P S+ ILIDA
Sbjct: 305 -YDQM-QRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAF 362
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG VE A + K MR + PD+ +YTT + V + + A F +K ++PN+
Sbjct: 363 AISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNV 422
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
V Y TL++ Y L+ V++ + VY+ M G + N T
Sbjct: 423 VVYGTLMKG---YSKLNNVERVMRVYERMRMQGVEPNQT 458
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 126/334 (37%), Gaps = 89/334 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +I + GDY ++R ++ + + + L+ FNSLM+ D K +Y
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFET-DYKEVSNIYD 306
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ + D+ SY++L+KA YG+ + E
Sbjct: 307 QMQRTALKPDVVSYSLLIKA-------------YGKARREEE------------------ 335
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL V E+ML AGV P +++ LI+A A +GLVE+A +F+ M + EP+
Sbjct: 336 --------ALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDL 387
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
++ A V A D A + FR RI
Sbjct: 388 CSYTTMVLAYVNASDMDGAEKFFR--------------------RI-------------- 413
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
K KP Y LMK + RV + MR G+ PN +
Sbjct: 414 -------------KEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T ++D G + + A+ K M G D A
Sbjct: 461 TTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKA 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL---------RSQNVTLNIYVF 294
YD ++ P++ +I G ++ A++E++ +S N+ ++ +
Sbjct: 305 YDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAI 364
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ L+ AH V+K M++ V D+ SY ++ A A + A++ + +K
Sbjct: 365 SGLVE-EAHT------VFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIK--- 414
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ LK +V Y T++K ++ + ++V E M GV PN ++++++
Sbjct: 415 -EDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDF 473
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILL 440
A+ F+EM G + + NILL
Sbjct: 474 GNAVIWFKEMEARGYPADKKAKNILL 499
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +L+ A G G+ A ++LK M + G P V++ T ++ R+K+ ++A ++F
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ +P+ VTY +L++ + + ++ A+++D+
Sbjct: 201 RRMQTSGPEPSAVTYQIILKS---FVEGDKYKEAEAIFEDL 238
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 205/491 (41%), Gaps = 76/491 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC--GICGDYMKSRAIYEDLRS 284
V + + RD AL K P++ +I C G+ Y R +++++++
Sbjct: 182 LVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFR-LFQEMQA 240
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ V+N L+ AH + + +Q G++AD SY L+ + G T
Sbjct: 241 EGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAE 300
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ + E+K + LK Y+T++ ++ Q VK + G++ N IT+
Sbjct: 301 AEALLEEMKWYGLRPNLK----AYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYC 356
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----- 457
LI+A A AGL+++ L++EM PN+ ++ + Q+ + +L R
Sbjct: 357 LLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416
Query: 458 ------------------SWTLSKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFV 497
+ L + ++A + DG D +S D P
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
+Y + PT T+NI++ + V ++ EMR+ G+ PN +++T L+
Sbjct: 477 RKLYYKMVND--GCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLV 534
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYT------TAIKVCVRS------------- 596
D + + A++ L+ M+EDGM P AY+ + +C ++
Sbjct: 535 DVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIE 594
Query: 597 ----------------KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
R ++AF++FE +K + + +TY TL++A R L EV
Sbjct: 595 INLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVS-- 652
Query: 641 LAVYQDMWKAG 651
V+ +M KAG
Sbjct: 653 -GVFDEMIKAG 662
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 132/299 (44%), Gaps = 53/299 (17%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
++ A + P A + + + FG+ R L A A+ + P++ ++ID C G
Sbjct: 413 MQQAGVTPDAHV-YNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAG 471
Query: 271 DYMKSRAIY-----------------------------------EDLRSQNVTLNIYVFN 295
+++R +Y E++RS+ + N+ +
Sbjct: 472 QPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYT 531
Query: 296 SLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++V A F +E + M++ G+ +Y+ L A G + ++ ++ +
Sbjct: 532 TLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLG---MCEQTLHVLQTM 588
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E + + ++++ + ++ F+ A Q A V E + AG+T + IT+++L+ A A
Sbjct: 589 EKENI-EINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEK 647
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+++ +F+EM++AGC P+ + ++L AFR F+ LS + E+Y
Sbjct: 648 LDEVSGVFDEMIKAGCRPDGKAKDMLRS----------AFR-FKERELSPKDKSFAEEY 695
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 517 TYNILMKACCTDYYRVKALMNEMRT---VGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY++L Y R + L + +G + + L+ A + + AL+ L
Sbjct: 142 TYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRGYNALVGAYAQNRDYGKALETLSK 201
Query: 574 MREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G PDVV+YT I+ C + F LF+EM+ +Q + Y L+ A G
Sbjct: 202 MKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFA---CG 258
Query: 633 SLHEVQQCLAVYQDMWKAGYKAN-DTYL 659
H+ + + + + +G A+ D+Y+
Sbjct: 259 QAHKPNEGMFFLEKLQASGLVADRDSYI 286
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 192/469 (40%), Gaps = 72/469 (15%)
Query: 233 KKRDLVSALRAYDASKKHLSS-PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL 289
K + +R +D K + PN+ ++D G+C G + + ++E + + N+
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD--GLCKFGRFKEVGEVWERMVANNLQP 297
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ + L++ + D+ VY + K G++ D A YN L+K C AG A + +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 348 GE---------------VKHLEAKGVLK----------------LDVFTYSTIVKVFADA 376
+K L G++ D T+ T++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A + E+ +G + ++SS+IN N G + A+ ++E+M + GC+PNS
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 437 NILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSIT 491
N L+ + + A R++ S T + DG ++ ++ +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 492 NTPNFVPN-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCT---- 527
N F P+ + Y S DK+ K +NIL+ C+
Sbjct: 538 N--GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ V + M E + PN +++ L+D +G ++ A + + EDG+ PD+++Y
Sbjct: 596 DEALHVFSDMKEKKNC--PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
T IK R+ + L +E+ I P ++T+ L+RA +YG +
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 28/433 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + K+ L AL D + P++ ++ C G++ K +++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N+ +N +++ K EV++ M + D+ +Y IL+ C +G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y E+ K L +D Y+++VK F A Q A K + AG+ N
Sbjct: 314 DVDGAARVYSEI----IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ +I ++G+V++A+ L++ + + C P++ L+ + ++AF +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S Q+ + Y + + N+ D + Y DK KP +
Sbjct: 429 EARVSGKQLDVFS-YSSMINGLCNVGRLVDAVKV-----------YEKMDKD-GCKPNSH 475
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN L+ C Y A + ++M G SP I++ LID + + A + + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G +PD+ Y + I+ K++ A S+++++ + ++ +++ + L+ G
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG-- 593
Query: 635 HEVQQCLAVYQDM 647
+V + L V+ DM
Sbjct: 594 -KVDEALHVFSDM 605
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 182/430 (42%), Gaps = 34/430 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHD-LKFTLE 310
+PN+ ++ GD ++ +++ LR + V + +++LM + D L L+
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTI 369
+ M + GV D+ YN LL C AG ++ + VK A+ L TY+ +
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLA----TYNVM 270
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ +V E M++ + P+ IT+ LI+ +G V+ A ++ E+++ G
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGL 330
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK---D 486
++ N L++ +A + A++ + S + + R N+ K D
Sbjct: 331 VIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR----------NLRTYNIMIKGLFD 380
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
+ + +K + P T T+ L+ C + + KA + E R G
Sbjct: 381 SGMVDEAIEL-----WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ S++ +I+ G + A+++ + M +DG P+ Y I + R A
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++ +M P ++TY TL+ + + Q+ +V ++M + G+ + T LI
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCK---AEKYQEASSVAREMVENGFTPDITTYGSLI- 551
Query: 665 EWCEGVIQDK 674
G+ DK
Sbjct: 552 ---RGLFSDK 558
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 158/353 (44%), Gaps = 24/353 (6%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ ++ +YNI+L++ C G+ A ++ ++ + + D TYST++ A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ----VAPDCITYSTLMCGLAKQDRL 209
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNI 438
AL + ++M +GV P+ + +++L+ C AG E+ M +++++++ G PN N+
Sbjct: 210 DHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+L C+F R + W + VA D T I + H + + +
Sbjct: 270 MLDGL---CKFGRFKEVGEVW---ERMVANNLQPDVITYGI--LIH----GLCRSGDVDG 317
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILID 556
+ S + YN L+K C RV+ + G + N ++ I+I
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQ-AGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376
Query: 557 ACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG V+ A+++ ++ +D PD V + T I ++ +AF++FEE + Q
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +Y +++ G L + + VY+ M K G K N LI +C+
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDA---VKVYEKMDKDGCKPNSHIYNALISGFCQ 486
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 135/321 (42%), Gaps = 49/321 (15%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ +++
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + + V P+ IT+S+L+ A ++ A+ L +EM ++G +P+ C N
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
LL C +A +F++ R++ D++ KD +
Sbjct: 233 ALLGGCFKAGEFEKVMRVW--------------------DKLV----KDPGA-------- 260
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+P TYN+++ C + V + M L P+ I++ ILI
Sbjct: 261 --------------RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG+V+GA ++ + + G+ D Y + +K ++ R+++A+ ++ ++
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 616 PNLVTYITLLRARSRYGSLHE 636
NL TY +++ G + E
Sbjct: 367 -NLRTYNIMIKGLFDSGMVDE 386
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
F + + +F +R + P TYNI++++ C D R L + +R ++P+ I+++
Sbjct: 141 FFASLSHGAFGRRIA--PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYST 198
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHY 612
L+ ++ AL +L M G+ PDVV Y + C ++ ++ +++++ K
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PNL TY +L ++G EV +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGE 285
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 170/388 (43%), Gaps = 64/388 (16%)
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLA 343
+ VFN++M V A +F ++ M+ + D+ S+N L+ K+ CLA + A
Sbjct: 62 TVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGS--A 119
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ EV+ + L+ DV TY+T++ + A+ V E+M+++ P+ T+++
Sbjct: 120 FDLLLEVRQVG----LRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNA 175
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+++ G + A +F E+++ G +P++ N LL A + D R+
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELV--- 232
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--IL 521
R FK TYN I
Sbjct: 233 --------------------------------------------RAGFKKDGITYNTMIH 248
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M L +EMR +G +P+ +++T+LID+ G + A ++L+ M + G+ P
Sbjct: 249 MYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKP 308
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+V ++ I + R ++A F M ++P+ + Y+ +L +R G ++++ +
Sbjct: 309 TLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSG---DMRKLM 365
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEG 669
A+YQ M GY+ ++ + ++ +G
Sbjct: 366 ALYQTMMNDGYRPDNALYQVMLAALAKG 393
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 173/411 (42%), Gaps = 74/411 (18%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----- 304
HL + + ++ V G + R + + +R Q + ++ FN+L+N A
Sbjct: 57 HLPGATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAP 116
Query: 305 ---LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
LEV +++G+ D+ +YN L+ AC N A ++ E+ E +
Sbjct: 117 GSAFDLLLEV----RQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRP---- 168
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D++TY+ +V V Q A ++ +++ G P+ +T++SL+ A A G + +
Sbjct: 169 DLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVC 228
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EE+++AG + + N ++ + + D A L+
Sbjct: 229 EELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLY------------------------- 263
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-----CTDYYRVKALM 536
+ +++ TP+ V TY +L+ + +D +V +
Sbjct: 264 ---DEMRALGCTPDAV-------------------TYTVLIDSLGKMDRISDAGKV---L 298
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM GL P ++++ LI A G E A++ M G+ PD +AY + + RS
Sbjct: 299 EEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARS 358
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+++ +L++ M + +P+ Y +L A ++ E++ AV QDM
Sbjct: 359 GDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIE---AVVQDM 406
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 157/357 (43%), Gaps = 39/357 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS-T 368
+V+ +MQ +G+ Y ++ A C G A ++ E + + L++ + T
Sbjct: 540 QVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEA----VQSGISLNILSSRVT 595
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ + K WQ A + + I W++LI+A A +GL E A +F+ M++ G
Sbjct: 596 MIEAYGKIKLWQHAENFVKGLKQEPSIDRRI-WNALIHAYAESGLYEHARAVFDIMIEKG 654
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSKTQVALGEDY---DGNTDRIS 480
P N +++A + + D + + + + +SK+ V L D G+ +
Sbjct: 655 PLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVM 714
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+ + K++ ++PN H Y ++ C + Y V+ ++ E
Sbjct: 715 KIYNGMKEA-----GYLPNMH---------------IYRSMISLLCRNKRYRDVELMVVE 754
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ L+ G+GN + +++ + E G+ P+ Y T I + R+ R
Sbjct: 755 MERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLR 814
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ F+L EM + P L +Y +LL A + + +Q +++++ GY+ N
Sbjct: 815 PEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQ---LFEEIRSKGYRLN 868
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/497 (19%), Positives = 190/497 (38%), Gaps = 70/497 (14%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKH 250
+N + C+ P + VR+ G + D+++ A+ ++
Sbjct: 105 INARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMAS 164
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFT 308
P+++ ++ V G CG + ++ +L + + +NSL+ A D
Sbjct: 165 ECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTV 224
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
V + + + G D +YN ++ G LA +Y E++ L D TY+
Sbjct: 225 ERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTP----DAVTYTV 280
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A KV E+M AG+ P +T+S+LI A A G E+A+ F M+ +G
Sbjct: 281 LIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASG 340
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRS------------WTLSKTQVALGEDYDGNT 476
+P+ ++L + + L+++ + + +A G +YD
Sbjct: 341 VKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIE 400
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
+ +ME P V +IL+KA C + L+
Sbjct: 401 AVVQDME----VVCQMNPQLVS--------------------SILIKAECIS--QGAKLL 434
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ G P+ S ++DA +G E L +L+ +RE S + +I + ++
Sbjct: 435 KKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKN 494
Query: 597 KRLKQAFSLFEEMK-----HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++ A + M+ + NL Y+ + + E Q V+ DM G
Sbjct: 495 QKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEF--FPEASQ---VFSDMQFIG 549
Query: 652 YKANDTYLKELIEEWCE 668
+ + + +I +C+
Sbjct: 550 IEPSRKIYESMISAYCK 566
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 136/318 (42%), Gaps = 18/318 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF---TLEVYKNMQKL 318
++D GD + IY ++ N++++ S++++ + ++ L V + M++
Sbjct: 700 MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVE-MERA 758
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ N LL GN E+Y + LEA L+ + TY+T++ +++
Sbjct: 759 GFEPDLTILNTLLLMYTGNGNFDKTVEVYHSI--LEAG--LEPNEDTYNTLIVMYSRNLR 814
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ + +M G+TP ++ SL+ A A L EQA LFEE+ G N ++
Sbjct: 815 PEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHM 874
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L++ +AC +A +L S + + + T + + + + N+
Sbjct: 875 LMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNS----- 929
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
S S P +T +N +K DY + EM+ G+ P+H WT I A
Sbjct: 930 ---LKSSSLEVSTLPYSTVFNAYLKN--GDYNLGITKLLEMKADGVKPDHQVWTCFIRAA 984
Query: 559 GGSGNVEGALQILKIMRE 576
A+ +L +R+
Sbjct: 985 SLCERTADAILLLNSLRD 1002
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 181/413 (43%), Gaps = 39/413 (9%)
Query: 268 ICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
+CG + + ++ ++ S + FN+++ + ++V +M + G + D
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y+ +L C G A E+ +K K D Y+T++K + W+ A
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP----DTIAYTTVLKGLCSIEQWEHAE 392
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA- 442
++ +M+ + P+ +T++++I + GLV++A+ + E+M + GC P+ N ++
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Query: 443 CVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
C E C D A L +S+ V G + DR + E +
Sbjct: 453 CNERC-IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQ-----------LM 500
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
N +S P TT+N ++ + C ++A+ + M G PN ++ I++
Sbjct: 501 VNMMHSDC------PPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA +G + AL++L M +PD++ Y T I ++ ++++A L M +
Sbjct: 555 DALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P+ +TY +L R + L QDM G + T+ +++ +C+
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDM---GLSPDATFYNDILLGFCQ 662
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 43/368 (11%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG A + +YN ++ C AG + + L + D FT++ +++
Sbjct: 124 LGASATVVTYNTMVNGYCRAGR-------IEDARRLISGMPFPPDTFTFNPLIRALCVRG 176
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL V +DML G +P+ +T+S L++A A QAM L +EM GCEP+ N
Sbjct: 177 RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN 236
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP--- 494
+L+ A D A + +D S+ D ++T TP
Sbjct: 237 VLINAMCNEGDVDEALNIL-------------------SDLPSHGCKPD--AVTYTPVLK 275
Query: 495 NFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
+ + + ++ F+ P T+N ++ + C R +++ M G P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++ ++D G V+ A+++L ++ G PD +AYTT +K ++ + A L
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
EM P+ VT+ T++ + + G V + + V + M + G + +I+
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGL---VDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Query: 667 C-EGVIQD 673
C E I D
Sbjct: 453 CNERCIDD 460
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 167/430 (38%), Gaps = 55/430 (12%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P F +R + + AL +D SP++ ++D Y ++
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R++ +I +N L+N N D+ L + ++ G D +Y +LK+ C
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ +E++ E+ A D T++TIV A+KV + M G
Sbjct: 279 GSERWKEVEELFAEM----ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+SS+++ + G V+ A+ L + GC+P++ +L+ Q++ A L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
S P
Sbjct: 395 MAEMVCSDC-----------------------------------------------PPDE 407
Query: 516 TTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N ++ + C R ++ +M G +P+ +++ +ID ++ A+++L
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
++ G PD+V + T +K R + A L M H P+ T+ T++ + + G
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527
Query: 634 LHEVQQCLAV 643
L + + L +
Sbjct: 528 LLQAIETLKI 537
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 29/261 (11%)
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
CNIL++ + A R+F + S T V +G R +E ++ I+ P
Sbjct: 101 CNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYC-RAGRIEDA-RRLISGMP- 157
Query: 496 FVPNSH------------------YSSFDKRF--SFKPTTTTYNILMKACC--TDYYRVK 533
F P++ + FD P+ TY+IL+ A C + Y +
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++EMR G P+ +++ +LI+A G+V+ AL IL + G PD V YT +K
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
S+R K+ LF EM + P+ VT+ T++ + + G V + + V M + G
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGL---VDRAIKVVDHMSEHGCI 334
Query: 654 ANDTYLKELIEEWCE-GVIQD 673
+ +++ C+ G + D
Sbjct: 335 PDIVTYSSILDGLCDVGRVDD 355
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 140/336 (41%), Gaps = 57/336 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G D+ +YN ++ C N + + +L++ G K D+ T++T
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLC---NERCIDDAMELLSNLQSYGC-KPDIVTFNT 482
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K W+ A ++ +M+ + P+ T++++I + GL+ QA+ + M + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN NI++ A ++A + A +L T
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT---------------------------- 574
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLS 545
TP+ + TYN ++ T +++ ++ +R + GLS
Sbjct: 575 --NGTPDLI-------------------TYNTVISN-ITKAGKMEEALDLLRVMVSNGLS 612
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++ L + A+++L +++ G+SPD Y + ++ R A
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDC 672
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F M P+ TYI LL A + L E +Q L
Sbjct: 673 FAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 33/326 (10%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E GV K D ++ ++ F+D+ A+K+ M G P T T+++LI G
Sbjct: 104 VEENGV-KPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVG 162
Query: 413 LVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------ 465
+AM L E M+Q G +PN + NIL+QA + + A+ + S Q
Sbjct: 163 RPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTY 222
Query: 466 --VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+A +G TD + K +Q Y++ KP T I+++
Sbjct: 223 NTLARAFAQNGETDNAERLILKMQQ-------------YNN-----KVKPNERTCGIIIR 264
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + +AL + +M+ +G+ PN + + LI + +G + L +M E G+ P
Sbjct: 265 GYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKP 324
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DVV Y+T + S + +F++M +I+P++ Y L + R G + +
Sbjct: 325 DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAE--- 381
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWC 667
A+ M K G +AN +I WC
Sbjct: 382 ALLNSMTKYGLQANVVIFTTIISGWC 407
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 149/342 (43%), Gaps = 27/342 (7%)
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FN+++N + K +++++ M++ G +++N L+K + G A ++ +
Sbjct: 115 LFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL---L 171
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G +K + TY+ +++ + + A V M+++G+ P+ +T+++L A A
Sbjct: 172 EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQ 231
Query: 411 AGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQ 465
G + A L +M Q +PN + C I+++ + A R + +
Sbjct: 232 NGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNP 291
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
V G D IT+T + + F KP TY+ +M A
Sbjct: 292 VVFNSLIKGYLD------------ITDTDGV---EEALTLMEEFGIKPDVVTYSTIMNAW 336
Query: 526 CTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ + + ++M + P+ +++IL +G + A +L M + G+ +V
Sbjct: 337 SSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANV 396
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
V +TT I + ++ A L+E+M NL TY TL+
Sbjct: 397 VIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLI 438
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 42/278 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
ILF + F + A++ + K+ P T+I GI G ++ + E
Sbjct: 114 ILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEM 173
Query: 282 L-RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + NV N +N L+ ++L+ V M G+ D+ +YN L +A G
Sbjct: 174 MIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233
Query: 339 NTVLAQEIYGEVKHLEAK--------GVL---------------------KLDV----FT 365
T A+ + +++ K G++ +L V
Sbjct: 234 ETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVV 293
Query: 366 YSTIVKVF---ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+++++K + D + AL + E+ G+ P+ +T+S+++NA +++GL++ +F+
Sbjct: 294 FNSLIKGYLDITDTDGVEEALTLMEEF---GIKPDVVTYSTIMNAWSSSGLMDNCEEIFD 350
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+M++A EP+ Q +IL + V A Q D+A L S T
Sbjct: 351 DMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMT 388
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ N + G P I++T L+ A +L + E+G+ PD + + I
Sbjct: 64 TIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAF 123
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY-QDMWKAGY 652
S ++ +A +F +MK +P T+ TL++ G HE + L + QD
Sbjct: 124 SDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQD---GNV 180
Query: 653 KANDTYLKELIEEWC 667
K N+ LI+ WC
Sbjct: 181 KPNERTYNILIQAWC 195
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS T L+ G A+ I + E+G P ++ YTT + R KR SL +
Sbjct: 44 ISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSK 103
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW-- 666
++ ++P+ + + ++ A S G +HE + +++ M + G K + LI+ +
Sbjct: 104 VEENGVKPDSILFNAMINAFSDSGKVHE---AMKIFRKMKECGCKPTTSTFNTLIKGFGI 160
Query: 667 ----------CEGVIQDKNQNQGEVT 682
E +IQD N E T
Sbjct: 161 VGRPHEAMKLLEMMIQDGNVKPNERT 186
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 135/348 (38%), Gaps = 73/348 (20%)
Query: 127 GRIDCVVGVLKKLNELGVAPLE-----LFDGSGFKLLKNECQRLLD----SGEVEMFVGL 177
G++ + + +K+ E G P L G G +E +LL+ G V+
Sbjct: 127 GKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERT 186
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKK 234
+L + EL+E + ++ VN +PD+ + + R F +
Sbjct: 187 YNILIQAWCTKNELEEAWNVMHKMVNSGMQPDI--------------VTYNTLARAFAQN 232
Query: 235 RD------LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
+ L+ ++ Y+ K PN C II G C + N+T
Sbjct: 233 GETDNAERLILKMQQYNNKVK----PNERTCGIIIR--GYC-------------KEGNMT 273
Query: 289 LNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
L+F +YK M++LGV + +N L+K +T +E
Sbjct: 274 --------------EALRF---LYK-MKELGVHPNPVVFNSLIKGYLDITDTDGVEE--- 312
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E G+ K DV TYSTI+ ++ + ++ +DM+ A + P+ +S L
Sbjct: 313 ALTLMEEFGI-KPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGY 371
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG ++A L M + G + N ++ A + D A RL+
Sbjct: 372 VRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLY 419
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 170/382 (44%), Gaps = 26/382 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P M +ID G GD + +ED+R Q + N+ V+ S++ D+
Sbjct: 131 PGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERT 190
Query: 312 YKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ MQ+ GV + +YN ++ + G + ++ V+ + A L LD FT+S
Sbjct: 191 FAEMQRSSGDGVEPNRTTYNAMVHSY---GQQQMMDKMEALVERMRADPGLGLDNFTHSA 247
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V ++ A AL+ + + + G P+ W+++++ AG ++ + ++M + G
Sbjct: 248 VVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLG 307
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG-EDYDGNTDRISNMEHKDK 487
+P++ N ++ A +A F++ + + VA + Y+ D
Sbjct: 308 VKPSTAVYNTIINAFGKARNIHSMMDTFKA--MRRDGVAADVKTYNTLID---------- 355
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ T V + KR +PT T LM A + +V L++ M+ G +
Sbjct: 356 -TWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRA 414
Query: 546 PNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+++ + +LID G G E A ++L M+E G++ + +T+ I+ R+ L +A
Sbjct: 415 PDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEE 474
Query: 605 LFEEMK-HYQIQPNLVTYITLL 625
M Y +P++ T TLL
Sbjct: 475 WLHRMNTDYATKPDIKTLTTLL 496
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 152/387 (39%), Gaps = 68/387 (17%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ VF+ L+ A D + +V ++M+++GV M++Y IL+ A AG+
Sbjct: 98 LAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDL-------- 149
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ WQ EDM G+ PN + ++S+I
Sbjct: 150 ---------------------------RRMWQ----AWEDMREQGLRPNVVVYTSVIATL 178
Query: 409 ANAGLVEQAMHLFEEMLQA---GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G V F EM ++ G EPN N ++ + + D+ L +
Sbjct: 179 GKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVER---MRAD 235
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTTTYN 519
LG D N H + + V + +FD + S T +
Sbjct: 236 PGLGLD---------NFTHSAVVAAWSRAGRV-DKALEAFDSIAATGGQPSLHAWTAILH 285
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+L A +D + +++M+ +G+ P+ + +I+A G + N+ + K MR DG+
Sbjct: 286 MLGTAGRSD--EMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGV 343
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ DV Y T I ++ + +A + MK +QP + T +L+ A Y + ++
Sbjct: 344 AADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDA---YTRADQFEK 400
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEW 666
L + M K G ++ LI+ +
Sbjct: 401 VLRLISRMKKEGRAPDNVVFNLLIDTY 427
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 127/324 (39%), Gaps = 22/324 (6%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV--FTYSTIVKVFADAKWWQMA 382
A Y +L++ C LA ++Y ++ V + +++ + A Q
Sbjct: 58 AKYEMLIEQCFEEKRPDLATQLYDHLRAETTTTQAAAPVPLAVFDVLLQGYGRAGDRQRL 117
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+V+ DM GV P T++ LI+A AG + + +E+M + G PN ++
Sbjct: 118 AQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIAT 177
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSH 501
+ R F ++ Q + G+ + N + M H +Q + +
Sbjct: 178 LGKLGDVAAMERTF-----AEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMD--------K 224
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRV----KAL--MNEMRTVGLSPNHISWTILI 555
+ +R P N A + R KAL + + G P+ +WT ++
Sbjct: 225 MEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAIL 284
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G +G + L+ L M+ G+ P Y T I +++ + F+ M+ +
Sbjct: 285 HMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVA 344
Query: 616 PNLVTYITLLRARSRYGSLHEVQQ 639
++ TY TL+ ++ G E ++
Sbjct: 345 ADVKTYNTLIDTWAKTGKAVEAEK 368
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 61/122 (50%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+ G +G+ + Q+ + MRE G+ P + YT I ++ L++ + +E+M+
Sbjct: 103 VLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQ 162
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQ 672
++PN+V Y +++ + G + +++ A Q G + N T ++ + + +
Sbjct: 163 GLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMM 222
Query: 673 DK 674
DK
Sbjct: 223 DK 224
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 43/238 (18%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++ + FGK R++ S + + A ++ + ++ T+ID G +++ Y +
Sbjct: 314 VYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLM 373
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + +Y SLM+ A + L + M+K G D +N+L+
Sbjct: 374 KREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLI--------- 424
Query: 341 VLAQEIYGEV-KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ YG + K EA+ VL + Y G+ T
Sbjct: 425 ----DTYGRMGKPEEAEKVLCGAMKEY--------------------------GIALETN 454
Query: 400 TWSSLINACANAGLVEQAMHLFEEM-LQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++S+I A A G +++A M +P+ + LL C+ A R R+
Sbjct: 455 NFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIKTLTTLLSFCIPAADVKRGRRVI 512
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 176/424 (41%), Gaps = 81/424 (19%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY-- 292
+D++ LR A++K L + N I D ++ I + L+ +V L+ +
Sbjct: 328 KDILKQLRWGPATEKALYNLNFSI------------DAYQANQILKQLQDHSVALSFFYW 375
Query: 293 ------------VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ +++ + A + ++ + M K G ++ +YN L+ + A
Sbjct: 376 LKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRAN 435
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ +++ + + D TY T++ + A A + +A+ + E M G++P+T
Sbjct: 436 YLGEALNVFNQMQEMGCEP----DRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDT 491
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S +IN +G + A LF EM+ GC PN NIL+ +A + A +L+R
Sbjct: 492 FTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYR- 550
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
D Q+ FKP TY
Sbjct: 551 ---------------------------DMQNA-------------------GFKPDKVTY 564
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+I+M+ C +A+ EM+ P+ + +LID G +GNVE A + M
Sbjct: 565 SIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLR 624
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ P+V + + +R RL A++L + M + P+L TY LL + S ++
Sbjct: 625 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYD 684
Query: 637 VQQC 640
+ C
Sbjct: 685 MGFC 688
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 41/300 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + A+ + K+ E M+ G PN +T++ LI++ A + +A+++F
Sbjct: 385 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVF 444
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGED 471
+M + GCEP+ L+ +A D A ++ ++T S LG+
Sbjct: 445 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 472 YDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCT 527
GN + E D+ + PN V TYNIL ++A
Sbjct: 505 --GNLSAAHRLFCEMVDQGCV---PNIV-------------------TYNILIALQAKAR 540
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+Y L +M+ G P+ ++++I+++ G G +E A + M+++ PD Y
Sbjct: 541 NYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYG 600
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + ++ +++A+ + M + PN+ T +LL A R +H + + Q+M
Sbjct: 601 LLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLR---VHRLPDAYNLLQNM 657
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYN L+ + Y +AL N+M+ +G P+ +++ LID +G ++ A+
Sbjct: 418 QPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMS 477
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+E G+SPD Y+ I +S L A LF EM PN+VTY L L+A
Sbjct: 478 MYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQA 537
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++R Q L +Y+DM AG+K + ++E
Sbjct: 538 KAR-----NYQTALKLYRDMQNAGFKPDKVTYSIVME 569
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y+ ++ SP+ + +I+ G G+ + ++ +
Sbjct: 457 VTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCE 516
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q NI +N L + A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 517 MVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGY 576
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E+K + D Y ++ ++ A + A + ML AG+ PN
Sbjct: 577 LEEAEAVFFEMK----QNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVP 632
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++A + A +L + M+ G P+ Q +LL C EA +D F
Sbjct: 633 TCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGF 687
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L AL ++ ++ P+ T+ID+ G + ++YE
Sbjct: 422 VTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 481
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ + + ++ ++N + +L ++ M G + ++ +YNIL+ A N
Sbjct: 482 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 541
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ K D TYS +++V + + A V +M P+
Sbjct: 542 YQTALKLYRDMQN----AGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEP 597
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ LI+ AG VE+A + ML+AG PN CN LL A F R RL ++
Sbjct: 598 VYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSA------FLRVHRLPDAY 651
Query: 460 TLSKTQVALG 469
L + V LG
Sbjct: 652 NLLQNMVTLG 661
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ M+ VGLSP+ +++++I+ G SGN+ A ++ M + G P++V Y I +
Sbjct: 477 SMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 536
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+++ + A L+ +M++ +P+ VTY ++ G L E + AV+ +M + +
Sbjct: 537 AKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAE---AVFFEMKQNNWV 593
Query: 654 ANDTYLKELIEEW 666
++ LI+ W
Sbjct: 594 PDEPVYGLLIDLW 606
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L+ M +DG P+VV Y I R+ L
Sbjct: 378 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 437
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+A ++F +M+ +P+ VTY TL+ ++ G L +++Y+ M + G DT+
Sbjct: 438 GEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFL---DVAMSMYERMQEVGLSP-DTF 492
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 157/327 (48%), Gaps = 36/327 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M+K V + +YN L+ + C G A+ + +K D FTY+ ++
Sbjct: 70 IFESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKK-----YCDPDEFTYAALI 124
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F ++ L++ E+ML+ G+ PN ++ +++A + +G EQ + LFE M++ C
Sbjct: 125 NGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECR 184
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI--SNMEHKDKQ 488
P+ + +L++A + + D AF + + S+ LG Y+ +R+ +N H +
Sbjct: 185 PDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGA-YNTLMNRLGKANKAHAALE 243
Query: 489 ---SITNTPNFVP------------------NSHYSSFDK-RFSFKPTTTTYNILM---- 522
I + PN+ P + +S + K R F+P +YN L+
Sbjct: 244 IFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPDIFSYNTLLGRLG 303
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+A D + +++++M G+ + I++ IL++ +GN++ AL L+ M+ G SP
Sbjct: 304 RAGRVDLF--ASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSSGFSPT 361
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A + +++ R A ++ +EM
Sbjct: 362 PSALEVLVNSLLKAGRFGAAEAVVQEM 388
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 155/361 (42%), Gaps = 31/361 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR---AMGLLP-DVITYNSLLNGYC 1271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ LI+ G +E+A L EEM + GC PN
Sbjct: 1272 KAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVC 1331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL++ + A R F LSK L D RI
Sbjct: 1332 TYTILMKGSLNVRSLAMA-REFFDEMLSK---GLQPDCFAYNTRI-------------CA 1374
Query: 495 NFVPNSHYSSFDKRF-----SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+ +F+ R T TYNIL+ C + K L +M + GL P+
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++T LI A G + A +I M DG+ P V +T I R L A+ F
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+M ++PN +TY L+ A R G Q + +M + G AN LI+ C
Sbjct: 1495 KMLEEGVEPNEITYNVLIHALCRMG---RTQLASHHFHEMLERGLVANKYTYTLLIDGNC 1551
Query: 668 E 668
+
Sbjct: 1552 K 1552
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 30/368 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G++ D+ +YN LL
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA-----EMRAMGLLPDVITYNSLLNG 1269
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AGN A ++G+++ + L V TY+ ++ + + A +KE+M G
Sbjct: 1270 YCKAGNLKEALLLFGDLR----RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++ L+ N + A F+EML G +P+ N + A + RAF
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAF 1385
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L +V + E +T + + H + T N +P
Sbjct: 1386 EL--------REVLMLEGISSDTVTYNILIH----GLCKTGNLKDAKELQMKMVSNGLQP 1433
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N M + GL P+ +++T++I A GN+ A
Sbjct: 1434 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 1493
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E+G+ P+ + Y I R R + A F EM + N TY L+ +
Sbjct: 1494 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 1553
Query: 632 GSLHEVQQ 639
G+ + +
Sbjct: 1554 GNWEDAMR 1561
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 49/290 (16%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + + GV DV + +++V DA W V E+ML G+ P+ +T+++L+++
Sbjct: 1073 REMASHGVAP-DVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 411 AGLVEQAMHLFEEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G ++ L +EM +GC PN N+++ + A L LSK +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS- 1190
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
F++ P T +L + C
Sbjct: 1191 ----------------------------------------FTYNPLIT--GLLARGCVKK 1208
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y ++ EM G+ P +++ +I SG VE A MR G+ PDV+ Y +
Sbjct: 1209 VYDLQL---EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 1265
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ LK+A LF +++ + P ++TY L+ R G L E +
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 1315
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 59/376 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL + ++ +P + +ID G C GD ++R +
Sbjct: 1261 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID--GYCRLGDLEEARILK 1318
Query: 280 EDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ Q N+ + LM ++N L E + M G+ D +YN + A +
Sbjct: 1319 EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ A E+ EV LE + D TY+ ++ + A +++ M+S G+ P+
Sbjct: 1379 GDIARAFELR-EVLMLEG---ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A GL+ +A +F M+ G P++ +++ A A+ FR
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L E +P T
Sbjct: 1495 K--------MLEE---------------------------------------GVEPNEIT 1507
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ A C +EM GL N ++T+LID GN E A++ M
Sbjct: 1508 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567
Query: 576 EDGMSPDVVAYTTAIK 591
++G+ PD + + +K
Sbjct: 1568 QNGIHPDYLTHKALLK 1583
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 54/366 (14%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ C G TV A ++ K + G + DV TYSTI+ +
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLF---KKMGEAGC-QPDVVTYSTIIDSLCKDRR 60
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + M + G++PN T++SLI N +A + EM+ PN ++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ F + +F + + KT +G + PN V
Sbjct: 121 LINI------FCKEGNVFEARGVLKTMTEMGVE----------------------PNVVT 152
Query: 499 NSH----YS----SFDKRFSF--------KPTTTTYNILMKACC--TDYYRVKALMNEMR 540
S YS F+ R F KP +YNIL+ C K L NEM
Sbjct: 153 YSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL+P+ +S+ LID G + A + K M +G PD+ Y+ + + L
Sbjct: 213 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 272
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+AF LF M+ ++PN+V Y L+ A + +L E ++ ++ +++ G + N + K
Sbjct: 273 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK---LFSELFVQGLQPNMKHWK 329
Query: 661 ELIEEW 666
L E W
Sbjct: 330 -LFEIW 334
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 65/331 (19%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K R + AL + K SPN++ ++I G+C + ++ A+ ++ S N+ N
Sbjct: 57 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ--GLCNFSRWREASAMLNEMMSLNIMPN 114
Query: 291 IYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
I F+ L+N+ N + + V K M ++GV ++ +Y+ L+ L A++
Sbjct: 115 IVTFSLLINIFCKEGNVFEAR---GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARK 171
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + KG K DVF+Y+ ++ + AK A ++ +M+ G+TP+ +++++LI
Sbjct: 172 LF---DVMITKGC-KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 227
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ G + +A LF+ ML G P+ +ILL + +AFRLFR
Sbjct: 228 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR-------- 279
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
A+ Y KP YNIL+ A
Sbjct: 280 -AMQSTY--------------------------------------LKPNMVMYNILIDAM 300
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
C + + L +E+ GL PN W +
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 17/282 (6%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M++ G P+ T++++IN G A LF++M +AGC+P+ + ++ + + +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ A +F S+ +K Y+ + N + S + N S
Sbjct: 61 VNEALDIF-SYMKAKGISPNIFTYNSLIQGLCNFSRWREASA------MLNEMMS----- 108
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P T+++L+ C + + + ++ M +G+ PN ++++ L++ V
Sbjct: 109 LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFE 168
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ +M G PDV +Y I ++KR+ +A LF EM H + P++V+Y TL+
Sbjct: 169 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 228
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L E ++++M G + L++ +C+
Sbjct: 229 GLCQLGRLREAHD---LFKNMLTNGNLPDLCTYSILLDGFCK 267
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 164/366 (44%), Gaps = 39/366 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK--GVLKLDVFTYST 368
V+ + + G+ D+ SYNILL C + A E+ H+ A G DV +YST
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELL----HIMADDGGDCPPDVVSYST 93
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ML ++PN +T++S+I A A V++AM + M+++G
Sbjct: 94 VINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 429 CEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEH 484
P+ N ++ + Q A + RS + V Y+ D + N
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT----YNSLMDYLCKNGRC 202
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTV 542
+ + I + S KR KP TTY L++ T V+ L++ M
Sbjct: 203 TEARKI-----------FDSMTKR-GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PNH ++IL+ A VE A+ + MR+ G++P+ V Y T I V +S R++ A
Sbjct: 251 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 310
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
FE+M ++P+ + Y +L+ + + + ++ ++ +M G + + +
Sbjct: 311 MLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE---LFLEMLDRGICLSTIFFNSI 367
Query: 663 IEEWCE 668
I+ C+
Sbjct: 368 IDSHCK 373
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 40/371 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q ++ N+ +NS++ A + +EV M K GVM D +YN ++ C +G
Sbjct: 110 QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ--- 166
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+E +K + + GV + DV TY++++ A K+ + M G+ P+ T+
Sbjct: 167 PKEAIVFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
+L+ A G + + L + M++ G PN +IL+ A + + + A +F R
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 460 TLSKTQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L+ V G D + R+ + +Q I +P +
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE-----------------GLRPDSIV 328
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ + C + + + L EM G+ + I + +ID+ G V + ++ +M
Sbjct: 329 YNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMV 388
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PD++ R +A LF + PN TY + G L
Sbjct: 389 RIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 438
Query: 636 EVQQCLAVYQD 646
E+ Q +D
Sbjct: 439 ELDQLFLSMED 449
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 164/378 (43%), Gaps = 32/378 (8%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
V G C AI + +RS V ++ +NSLM+ + + T +++ +M K G+
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y LL+ G V E++G + + G+ + + +S +V +A + +
Sbjct: 218 KPDITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILVCAYAKQEKVE 273
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+ V M G+ PN +T+ ++I+ +G VE AM FE+M+ G P+S N L+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++++A LF + + L + + I + K+ + I + F
Sbjct: 334 HSLCIFDKWEKAEELF--LEMLDRGICLSTIF---FNSIIDSHCKEGRVIESGKLF---- 384
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
R KP T +A K L + GL PN+ ++ ++ + G
Sbjct: 385 ---DLMVRIGVKPDIITLGRNDEA--------KDLFVAFSSNGLVPNYWTYRLMAENIIG 433
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPN 617
G +E Q+ M ++G + D ++ ++ + +A S+ +E KH+ ++ +
Sbjct: 434 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEAS 492
Query: 618 LVTYITLLRARSRYGSLH 635
+ L + +Y H
Sbjct: 493 TASLFIDLLSGGKYQEYH 510
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 218 PRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYICRT 261
P+ I+F +R G + D+V+ A + +D+ K P++ T
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
++ G ++ + + + + N YVF+ L+ A K + V+ M++ G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + +Y ++ C +G A +Y E E L+ D Y++++ W
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAM-LYFEQMIDEG---LRPDSIVYNSLIHSLCIFDKW 342
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A ++ +ML G+ +TI ++S+I++ G V ++ LF+ M++ G +P+
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 103/255 (40%), Gaps = 29/255 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ ++ + K LV D ++ PN Y+ ++ ++ ++ +R
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
Q + N + ++++V + ++ + ++ M G+ D YN L+ + C+
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTI------VKVFADAKWWQMALK--VKEDML--- 390
A+E++ E+ +G+ +F S I +V K + + ++ VK D++
Sbjct: 344 KAEELFLEMLD---RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400
Query: 391 -------------SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
S G+ PN T+ + GL+E+ LF M GC +S N
Sbjct: 401 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 460
Query: 438 ILLQACVEACQFDRA 452
+++ ++ + RA
Sbjct: 461 FIVRELLQRGEITRA 475
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 71/379 (18%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + +QE E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLC---DENRSQEAL-ELLHMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVF--------ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
T++ F A+ A++V M+ GV P+ +T++S+++ ++G ++A+
Sbjct: 206 TVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
++M G EPN + L+ + + A ++F S T
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT------------------- 306
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
KR +P TY L++ C + +++ L +
Sbjct: 307 ---------------------------KR-GLEPDIATYRTLLQGHCKEGRVIESEKLFD 338
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M +G+ P+ I++ LID C +G ++ A ++L M G+ PD+V Y T I R
Sbjct: 339 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 398
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKAN 655
R+ A +LF+EM + PN++TY +L+ G H + A +Y + K+G +
Sbjct: 399 RMDDALALFKEMVSSGVSPNIITYNIILQ-----GLFHTRRTAAAKELYVSITKSGTQLE 453
Query: 656 DTYLKELIEEWCEGVIQDK 674
+ ++ C+ + D+
Sbjct: 454 LSTYNIILHGLCKNNLTDE 472
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 146/367 (39%), Gaps = 54/367 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
D+ S N LN + + + A + +EV M K GVM D +YN +L C +G
Sbjct: 200 DVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 259
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E G +K + + GV + +V TYS+++ A K+ + M G+ P+
Sbjct: 260 ---PKEAIGTLKKMRSDGV-EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ +L+ G V ++ LF+ M++ G +P+ N L+ C A + D A +L S
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V++G KP TY
Sbjct: 376 ------VSVG-----------------------------------------VKPDIVTYG 388
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + AL EM + G+SPN I++ I++ + A ++ + +
Sbjct: 389 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 448
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G ++ Y + ++ +A +F+ + +Q T+ ++ A + G + E
Sbjct: 449 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 508
Query: 638 QQCLAVY 644
+ A +
Sbjct: 509 KDLFAAH 515
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++++ G ++R I++ + + + +I + +L+ + + + + ++
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++GV D+ +YN L+ CCLAG A ++ + + + GV K D+ TY T++
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL---LASMVSVGV-KPDIVTYGTLIN 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + ++M+S+GV+PN IT++ ++ + A L+ + ++G +
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
NI+L + D A R+F++ L+ Q+
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 487
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+ID C + G ++ + + S V +I + +L+N + L +
Sbjct: 347 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 406
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M GV ++ +YNI+L+ T A+E+Y + K +L++ TY+ I+
Sbjct: 407 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI----TKSGTQLELSTYNIILH 462
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AL++ +++ + T T++ +I A G +++A LF G P
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW 459
+ + +++ + +E + LF S
Sbjct: 523 DVRTYSLMAENLIEQGSLEELDDLFLSM 550
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 44/415 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE--QAMHLFEEMLQAG 428
+A + + +L+V + M G P T++ LIN GLVE QA+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-----GLVEKRQAVEILDEMTLAG 651
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SN 481
N ++Q +AF F V + Y+ + R+ S
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSA 710
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
+ + S N P R SF YNIL+ D + L+ +M
Sbjct: 711 LAVTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQM 752
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 867
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 191/464 (41%), Gaps = 66/464 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYD------GNTDR----ISNMEHKDKQSITNTPNFVP--NSHY 502
K V L + GN DR + M+ + T T F+P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT--FMPIIHGYA 600
Query: 503 SSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
S D R S + PT T+N L+ V+ +++EM G+S N ++
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVE-ILDEMTLAGVSANEHTY 659
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 660 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 719
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I N Y L+ +R G + E + Q M K G K +
Sbjct: 720 RNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 760
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 197/477 (41%), Gaps = 69/477 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K +A +D +K+ + N I II C C + ++ A+
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
I ++++I+A G +++A+ +EM + P ++ ++ ++ R+ +F
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 457 -RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T +G ++ +E D+ ++ N H
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVS---ANEH-------------- 657
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK- 572
TY +M+ A D + ++ GL + ++ L+ AC SG ++ AL + K
Sbjct: 658 -TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 716
Query: 573 ----------------------------------IMREDGMSPDVVAYTTAIKVCVRSKR 598
M+++G+ PD+ YT+ I C ++
Sbjct: 717 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 776
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 777 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMGIKPD 830
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 188/442 (42%), Gaps = 46/442 (10%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL-RSQNVTLNIYVF 294
DL+ AL+ +D ++ +ID GDY K + I+E L + +V N+ +
Sbjct: 201 DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTY 260
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N ++N +F +LE+++ M K DM +Y+ L+ C AGN A +Y E+
Sbjct: 261 NIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI-- 318
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED-----MLSAGVTPNTITWSSLINA 407
+ L +D T++ ++ F A K+KE ++ ++++ LI
Sbjct: 319 --VESSLVVDAVTHNAMLNGFCRAG------KIKESFELWMVMGKENCQTVVSYNILIKG 370
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-------- 459
G VE+A+ ++E + + GC P S +L+ + + ++A ++F+
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLD 430
Query: 460 TLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPN--------FVPNSHYS---SFDK 507
+ + + G +G D IS + DK+ P+ FV S +F +
Sbjct: 431 AYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFR 490
Query: 508 RFSFK---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K PT +YN L+K C + + + EM P+ I+ ++L+D
Sbjct: 491 EMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEK 550
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E AL + + + G PD+ Y + +L+ A L+ MK PNLVT
Sbjct: 551 KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRN 610
Query: 623 TLLRARSR---YGSLHEVQQCL 641
TL+ + Y E+ C+
Sbjct: 611 TLMEGLYKVRDYEKASEIWDCI 632
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 18/335 (5%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ +++ + K G + +Y +L+ C G A +I+ E + G KLD + YS
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAE----DGPGKLDAYAYS 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++V A+ + M G + + LIN A +E A++ F EM
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P N L++ +A +F A+ + L K + D I+ D
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKE-MLEK---------EWKPDMITCSLLMDG 545
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
N + DK FKP T YNILM C+ AL + M+
Sbjct: 546 LCQEKKIEMALNLWQQALDK--GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ + E A +I + +DG+ PD+++Y IK R+ A
Sbjct: 604 PNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEF 663
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ + I P VT+ L+RA + + + C
Sbjct: 664 LNDALNRGILPTAVTWNILVRAAVNFRTSSVLSAC 698
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 144/364 (39%), Gaps = 57/364 (15%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ ++NMQ + G + SYN LL A A+ + ++ L+ TY
Sbjct: 99 ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQ----TY 154
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ + + A+ + + M S + P+ ++ +LIN G + A+ +F+EM
Sbjct: 155 NILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSV 214
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G + C N+L+ + +D+ +
Sbjct: 215 RGVVADVTCYNMLIDGFFKHGDYDKGKEI------------------------------- 243
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ K S P TYNI++ C + + M
Sbjct: 244 ---------------WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNER 288
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI +GN++GA+++ K + E + D V + + R+ ++K++F
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L+ M Q +V+Y L++ G +V++ +++++ + K G + T LI
Sbjct: 349 LWMVMGKENCQ-TVVSYNILIKGLFENG---KVEEAISIWELLCKKGCRPESTTYGVLIH 404
Query: 665 EWCE 668
C+
Sbjct: 405 GLCK 408
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 102/271 (37%), Gaps = 54/271 (19%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
++I A A + +A+ F+ M GC+P + N LL A VE ++DRA
Sbjct: 85 TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA--------- 135
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+S + + P TYNIL
Sbjct: 136 --------------------------------------ESFSRYFESMDVSPNLQTYNIL 157
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C KA L++ M + L P+ S+ LI+ G++ GAL++ M G+
Sbjct: 158 IKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGV 217
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
DV Y I + + ++E + K + PN+VTY ++ + G E
Sbjct: 218 VADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDES- 276
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
L +++ M K + + LI CE
Sbjct: 277 --LEIWERMTKNEREKDMFTYSSLIHGLCEA 305
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P S+ L++A + A + +SP++ Y IK+ + +++++A
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
SL + M ++P++ +Y TL+ + G L L V+ +M G A+ T L
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL---LGALKVFDEMSVRGVVADVTCYNML 227
Query: 663 IEEWCEGVIQDKNQNQGE 680
I +G + + ++G+
Sbjct: 228 I----DGFFKHGDYDKGK 241
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 211/481 (43%), Gaps = 72/481 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR-SQNVTLNIYVF 294
DL A ++ K++ + P+ I ++D C GD + + +++ SQ + L+ +
Sbjct: 373 DLKLAFSLFEEYKQY-NQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQLDEITY 431
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L+ L L +++ M+ +G+ + S+N LL +C +A + E++
Sbjct: 432 NTLIKGCGRKKRLNDALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMR- 490
Query: 353 LEAKGVLKLDVFTYSTIVKVF----ADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINA 407
+ G+ D FTYS +V ++ A+ + E + G P+ I ++SLI+A
Sbjct: 491 -KQYGIFP-DNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDA 548
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C +++ M LF EM EP+S IL++A + + AF++F
Sbjct: 549 CVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFE---------- 598
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
E K K+ N TY L+ AC
Sbjct: 599 ---------------EMKQKKIPIND----------------------VTYGCLVDACVR 621
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS-PDVV 584
+ +AL +++M++ L N + +T +I E A++ +M++ + P+++
Sbjct: 622 NDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFDLMKQSPKTYPNLI 681
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + + V++ L QA LF+E+ +I+P+L+T+ TLL+ R G++ + + + +
Sbjct: 682 TYNSLLDGMVKNGLLNQADKLFQELVDSKIKPDLITFSTLLKGHCRKGNMKRLNETVQIM 741
Query: 645 QDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQS--LLLEKVAV 702
+ + D L +LI E C ++ Q V + + Q PQS LLL + +
Sbjct: 742 TGLQISP----DESLLQLILEAC----LNQQQYHIGVQIFDQFCHQIPQSTQLLLTIIRL 793
Query: 703 H 703
H
Sbjct: 794 H 794
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 168/409 (41%), Gaps = 59/409 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF----NSLMNVNAHDLKFTL 309
P + T+ID K+ +E+L+ + + + N L N + DLK
Sbjct: 319 PTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKLAF 378
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ ++ D YN LL AC AG+ ++ E+K
Sbjct: 379 SLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQ----------------- 420
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
S + + IT+++LI C + A++LFEEM G
Sbjct: 421 ---------------------SQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGI 459
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME--HKDK 487
+PN N LL +CV+ + + A+R F + Q + D + ++ ++ H ++
Sbjct: 460 KPNRISFNSLLDSCVKCNKMNIAWRYFEEM---RKQYGIFPDNFTYSILVNGIKTNHSNR 516
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ + + FKP YN L+ AC + + L EM+ +
Sbjct: 517 DELLRAITLLEQIQETG-----QFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIE 571
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ ILI A G ++ GA +I + M++ + + V Y + CVR+ RL QA
Sbjct: 572 PSSVTYGILIKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQF 631
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
++MK + N V Y T+++ + L++ ++ + Y D+ K K
Sbjct: 632 IDQMKSQNLPINTVLYTTIIKG---FCKLNQTEEAIK-YFDLMKQSPKT 676
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 171/444 (38%), Gaps = 71/444 (15%)
Query: 201 CVNKPDVNLA------IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
C+N D+N ++ + + +I + ++ G+K+ L AL ++ K P
Sbjct: 402 CINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIKP 461
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQ------NVTLNIYVFNSLMN-VNAHDLKF 307
N +++D C C + +E++R Q N T +I V N N +L
Sbjct: 462 NRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLR 521
Query: 308 TLEVYKNMQKLGVM-ADMASYNILLKACCLAGNTVLAQEIYGEVKH--LEAKGVLKLDVF 364
+ + + +Q+ G D YN L+ AC E++ E+K+ +E V
Sbjct: 522 AITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSV------ 575
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY ++K + A K+ E+M + N +T+ L++AC ++QA+ ++M
Sbjct: 576 TYGILIKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQM 635
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
N+ +++ + Q + A + F
Sbjct: 636 KSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFDLM------------------------- 670
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQS PN + TYN L+ + + L E+
Sbjct: 671 --KQSPKTYPNLI-------------------TYNSLLDGMVKNGLLNQADKLFQELVDS 709
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ I+++ L+ GN++ + ++IM +SPD ++ C+ ++
Sbjct: 710 KIKPDLITFSTLLKGHCRKGNMKRLNETVQIMTGLQISPDESLLQLILEACLNQQQYHIG 769
Query: 603 FSLFEEMKHYQIQPNLVTYITLLR 626
+F++ H QI + +T++R
Sbjct: 770 VQIFDQFCH-QIPQSTQLLLTIIR 792
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRLK 600
+ L P I + LID VE A +L MR+ + P +V T I ++ + +
Sbjct: 279 INLHPTDIFFNKLIDYAFRKSQVEMAEYLLVFMRDQAKIQPTIVTINTMIDQYFKNNQRE 338
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRA 627
+A+ FE +K Q +P+ TY TL+
Sbjct: 339 KAWKTFENLKLTQTKPDNFTYTTLING 365
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 222/510 (43%), Gaps = 39/510 (7%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
+ +C R+ N + E G+ +++ S L D+ + P++ T++ I
Sbjct: 66 KTSCRTVRSRTKLMNIMIEKGRPQEVQSIL---DSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ +I + + + FN+++N + +++ ++ + M++ G +++N
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K +AG +Q++ + E ++ ++ TY+ +V+ + + K A V M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDEN---VRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVE--- 445
+++G+ P+ +T++++ A A G QA + EM + +PN + CC I+ C E
Sbjct: 240 VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKI 299
Query: 446 --ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A QF +R+ + L V G D + D+ + +
Sbjct: 300 KEALQF--VYRM-KDLGLQPNLVVFNSLIKGFIDAV------DRDGVNEVLTLM------ 344
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ F KP T++ +M A + + + + ++M + P+ ++IL +
Sbjct: 345 ---EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E A +IL M + G P+VV +TT I + R++ A +FE+M I PNL T+
Sbjct: 402 GEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTF 461
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW-CEGVIQDKNQNQGE 680
TL+ YG + + V Q M + + T L + E W G+ ++ N+
Sbjct: 462 ETLIWG---YGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSA 518
Query: 681 VTLCRRTN-SQRPQSLLLEKVAVHLQKSAA 709
V T+ + R + + + H QK +A
Sbjct: 519 VKNEEMTHETDREDKIPVGSLEKHYQKPSA 548
>gi|440794290|gb|ELR15456.1| pentatricopeptide repeat domain/PPR repeatcontaining protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 551
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 180/435 (41%), Gaps = 93/435 (21%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTL 309
++ I T+I + GD+ + A+ + +R + + + + +L+ + H L
Sbjct: 62 DVAIFSTLIKIFAAGGDWARCEALMQHMRDEKIKPTVVTYTNLLKYCERVESWHKAAEVL 121
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E K + G+ D+ Y ++ CC + A + E+++ +GV K ++FTY+++
Sbjct: 122 EQMK-AEAPGLKPDVVFYTAMVNVCCKRNDLTQALRVLAEMRN---EGV-KPNIFTYASL 176
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-G 428
V + K + AL + E+M + PN ++SLIN C + AM LF++M +
Sbjct: 177 VNICEREKNLKKALDLLEEMKDENIQPNVYIYTSLINVCEKKRDLVTAMKLFDDMTRLYR 236
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN+ N LL CVE DR +
Sbjct: 237 IRPNTFTFNSLLNVCVEKRDLDRGMEVL-------------------------------- 264
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
++ VPN T+T+N L C K L+ M+T G+SP
Sbjct: 265 ALMRQHQVVPN---------------TSTFNSLASLCAKTGNAAKGLELLATMKTTGVSP 309
Query: 547 NHISWTILIDACGG---SGN---------------------VEGALQIL-KIMREDGMSP 581
+++++T LI AC GN +E AL +L ++ RE ++P
Sbjct: 310 DNLTFTSLIAACRARDTEGNDAADTADSTAAQARESTASPPLEQALSLLDRMQREFNVAP 369
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK-----HYQIQPNLVTYITLLRARSRYGSLHE 636
D + T + VC+RS+RL A + + K + +Q + Y L+ ++ G +
Sbjct: 370 DNITLITLMSVCLRSRRLGYALRAYGQAKAELARNRALQLDKENYYELVNLCAKNG---Q 426
Query: 637 VQQCLAVYQDMWKAG 651
++ L + DM AG
Sbjct: 427 WRRGLEIVSDMENAG 441
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 175/416 (42%), Gaps = 46/416 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C V + K +++ ++A K P++ +++VC D ++ + ++R
Sbjct: 107 YCERVESWHKAAEVLEQMKAEAPGLK----PDVVFYTAMVNVCCKRNDLTQALRVLAEMR 162
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ V NI+ + SL+N+ +LK L++ + M+ + ++ Y L+ C + V
Sbjct: 163 NEGVKPNIFTYASLVNICEREKNLKKALDLLEEMKDENIQPNVYIYTSLINVCEKKRDLV 222
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ ++ L ++ + FT+++++ V + + ++V M V PNT T+
Sbjct: 223 TAMKLFDDMTRLYR---IRPNTFTFNSLLNVCVEKRDLDRGMEVLALMRQHQVVPNTSTF 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SL + CA G + + L M G P+ N+ + + AC+
Sbjct: 280 NSLASLCAKTGNAAKGLELLATMKTTGVSPD----NLTFTSLIAACR------------- 322
Query: 462 SKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D +GN D + + ++S + P S + F+ P T
Sbjct: 323 -------ARDTEGNDAADTADSTAAQARESTASPPLEQALSLLDRMQREFNVAPDNITLI 375
Query: 520 ILMKACCTD---------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LM C Y + KA + R + L + + L++ C +G L+I
Sbjct: 376 TLMSVCLRSRRLGYALRAYGQAKAELARNRALQLDKEN--YYELVNLCAKNGQWRRGLEI 433
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ M G++P V Y + ++ ++ L+ A + M+ +++ + T + L R
Sbjct: 434 VSDMENAGLTPSVRIYNSFLRNFDPTQDLEDAKEVVRLMRSKEVEEDDTTKVLLRR 489
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN 537
++ ++ K++ S T N + ++ R F + I + A D+ R +ALM
Sbjct: 29 KVKDLSDKERMSAAQTLYERMNKLHDNYSARL-FDVAIFSTLIKIFAAGGDWARCEALMQ 87
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVAYTTAIKVCVR 595
MR + P +++T L+ C + A ++L+ M+ + G+ PDVV YT + VC +
Sbjct: 88 HMRDEKIKPTVVTYTNLLKYCERVESWHKAAEVLEQMKAEAPGLKPDVVFYTAMVNVCCK 147
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L QA + EM++ ++PN+ TY +L+ R +L + L +D
Sbjct: 148 RNDLTQALRVLAEMRNEGVKPNIFTYASLVNICEREKNLKKALDLLEEMKD 198
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 161/356 (45%), Gaps = 23/356 (6%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R I +L + N+ + + L+ H + + LG D SY L+
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQ---AFLFHDKLVALGFHLDQVSYGTLIH 168
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G T A ++ ++ ++ K +++L+ Y+T++ K A + +M+S
Sbjct: 169 GLCKVGETRAALDL---LQRVDGK-LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G++PN +T+S+LI+ G ++ A+ LF +++ +P+ NIL+ + +
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F + + + + Y+ D + E +SI NT +
Sbjct: 285 KTVF-AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM------------AQGGV 331
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YNIL+ C KA L NEM + PN +++ LID SG + ALQ
Sbjct: 332 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ M + G+ P+++ Y + I ++ ++ +A +L + K IQP++ TY L+
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 447
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 155/398 (38%), Gaps = 75/398 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SPN+ +I + G + ++ + +N+ + Y FN L++ D +K
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G++ D+ +YN L+ CL A+ I+ + A+G + D+ +Y+ ++
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM----AQGGVNPDIRSYNILI 342
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K A+ + +M + PN +T++SLI+ + +G + A+ L ++M G
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 402
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N ++ A + Q D+A L + KD+
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKF-------------------------KDQ--- 434
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
+P+ TY IL+ C + G +
Sbjct: 435 -------------------GIQPSMYTYTILIDGLC-------------KVEGYDITVNT 462
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++I G + AL +L M++ P+ V Y I+ + + +A LF EM
Sbjct: 463 YNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM- 521
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+T L R+ S S ++ Q L + Q W
Sbjct: 522 --------ITRGLLNRSASYPCSSMKIHQSLTMVQHTW 551
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 133/334 (39%), Gaps = 41/334 (12%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K++ +YS+ F A+ + +L TP ++ ++ + + +
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 420 LFEEMLQAGCEPNSQCCNILL----QACVEACQFDRAFRLFR----SWTLSKTQVALGED 471
L ++M G +PN CNIL+ Q + CQ +AF LF + QV+ G
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAF-LFHDKLVALGFHLDQVSYGTL 166
Query: 472 YDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
G + ++ D + + + YN ++
Sbjct: 167 IHGLCKVGETRAALDLLQRVDGKLV---------------------QLNAVMYNTVIYGM 205
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C D + A L +EM + G+SPN ++++ LI G ++ A+ + + + + PD
Sbjct: 206 CKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDG 265
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + + +++K+ ++F M I P++VTY +L+ Y + EV ++
Sbjct: 266 YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG---YCLVKEVNTAKSI 322
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ M + G + LI +C+ DK N
Sbjct: 323 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 356
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 27/203 (13%)
Query: 497 VPNSHYS---SFDKRFSF---KPTTTTYNILMKACCT------DYYRVKALMNEMRTVGL 544
V + HY S ++ F KP NIL+ C ++ +++ +G
Sbjct: 97 VKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGF 156
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDG--MSPDVVAYTTAIKVCVRSKRLKQA 602
+ +S+ LI G AL +L+ R DG + + V Y T I + K + A
Sbjct: 157 HLDQVSYGTLIHGLCKVGETRAALDLLQ--RVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 214
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL--AVYQDMWKAGYKANDTYLK 660
F L+ EM I PN+VTY L+ G L + + +++ GY N
Sbjct: 215 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN----- 269
Query: 661 ELIEEWCEGVIQDKNQNQGEVTL 683
L++ +C +D+ +G+
Sbjct: 270 ILVDGFC----KDRKMKEGKTVF 288
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 195/453 (43%), Gaps = 39/453 (8%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+ LAI C + R ++L + + +G + A D ++H S + I +I +
Sbjct: 593 LRLAISQGCELDRENLL--SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIM- 649
Query: 267 GICGDYMKSRAIYEDLRSQNVTL---NIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVM 321
+C + A+ E ++++ L + ++ SL+ + F +++ +M+ GV
Sbjct: 650 -LCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 708
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
Y ++ C G A + + E KG+L DV ++ +++ + K WQ
Sbjct: 709 PSDHLYRSMVVTYCKMGFPETAHYL---IDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 765
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A + + + W++LI+A A +G E+A +F M++ G P N L+Q
Sbjct: 766 AESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 825
Query: 442 ACVEACQFDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
A + + D + + + + +SK+ + L D + I F
Sbjct: 826 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI----------------F 869
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
Y K + PT Y I++ A V+A+++EM P+ W +
Sbjct: 870 EVKKIYQGM-KAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSV 928
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ G G+ + Q+ ++++E G+ PD Y T I + R +R ++ SL EM+ +
Sbjct: 929 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 988
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L TY +L+ A +G L V+Q +++ +
Sbjct: 989 EPKLDTYKSLISA---FGKLQMVEQAEELFEGL 1018
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 32/433 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G+ AL Y+ + +H SPN + TI+ V G + I+
Sbjct: 156 FCFVVKWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-- 212
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ + N + V+N++M V A +FT E+ M+ G D+ S+N L+ A +G
Sbjct: 213 RAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGT 272
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V LA E+ EV+ + ++ D+ TY+T++ + + A+KV DM++ P+
Sbjct: 273 MVTNLAIELLNEVR----RSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 328
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ G+ +A LF+++ G P++ N LL A D+ +
Sbjct: 329 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 388
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-PTTT 516
++ G+D + + I +M K Q + + YS D + S + P
Sbjct: 389 D----MVKMGFGKD-EMTYNTIIHMYGKRGQ------HDLAFQLYS--DMKLSGRSPDAV 435
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY +L+ + +A +M+EM + P +++ LI +G A + M
Sbjct: 436 TYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCM 495
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PD +AY+ + + +R +A L++EM + +P+ Y +LR +
Sbjct: 496 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 555
Query: 635 HEVQQCLAVYQDM 647
+V + V +DM
Sbjct: 556 EDVHK---VVKDM 565
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+R + I P DI+ N + ++ +L A++ Y+ H P+++ +I V G C
Sbjct: 285 VRRSGIQP--DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRC 342
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G ++ +++DL S+ + +NSL+ A + + E+ ++M K+G D +Y
Sbjct: 343 GMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTY 402
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ G LA ++Y ++K L + D TY+ ++ A + A +V
Sbjct: 403 NTIIHMYGKRGQHDLAFQLYSDMK-LSGRSP---DAVTYTVLIDSLGKANMIKEAAEVMS 458
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML+A V P T+S+LI A AG +A F+ ML++G +P+ +++L +
Sbjct: 459 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 518
Query: 448 QFDRAFRLFRSWTL 461
+ +A +L++ L
Sbjct: 519 ESGKAMKLYQEMVL 532
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 21/254 (8%)
Query: 415 EQAMHLFEEM-LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
++A+ ++E + L+ PN++ +L +A Q A +F A E
Sbjct: 169 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIF----------ARAEAAS 218
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
GNT ++ N T F + +P ++N L+ A V
Sbjct: 219 GNTVQVYNAMMG---VYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVT 275
Query: 534 ----ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L+NE+R G+ P+ I++ LI AC N+E A+++ M PD+ Y
Sbjct: 276 NLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAM 335
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I V R ++A LF++++ P+ VTY +LL A +R G++ +V++ + +DM K
Sbjct: 336 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE---ICEDMVK 392
Query: 650 AGYKANDTYLKELI 663
G+ ++ +I
Sbjct: 393 MGFGKDEMTYNTII 406
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 160/389 (41%), Gaps = 49/389 (12%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY---KN 314
+ +I G Y ++RAI+ + + + N LM D + E+Y +
Sbjct: 784 VWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLD-ELYVVIQE 842
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK--------HLE-------AKGV- 358
+Q +G +S ++L A AGN ++IY +K HL AKG
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 902
Query: 359 ---------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
K D+ +++++K++ ++ +V + + AG+ P+ T+++
Sbjct: 903 VRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 962
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI E+ + L EM + G EP L+ A + ++A LF LSK
Sbjct: 963 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEG-LLSK 1021
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ DR + H + N+ N K +PT T ++LM
Sbjct: 1022 ---------ECKLDR--SFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1070
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ +A +++ ++ GL + + ++ +IDA +G+ A+Q L M++DG+ P
Sbjct: 1071 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1130
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
D +T ++ S+ +A L + ++
Sbjct: 1131 DHRIWTCFVRAASLSQHTSEAIVLLKALR 1159
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 174/425 (40%), Gaps = 36/425 (8%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
R IYE+ + + FN+L+N +K LE+ M + G D+ +YN L+
Sbjct: 290 RFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A EI + H+ ++ + + TY+T++ + A ++ + S G
Sbjct: 347 LCKLGEIDEAVEI---LHHMVSRDC-EPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ T++SLI E AM LFEEM + GC+P+ +IL+++ + A
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 454 RLFRSWTLS---KTQVALGEDYDG---------NTDRISNMEHKDKQSITNTPNFVPNSH 501
L + LS + V DG D ME + T N + N
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522
Query: 502 YSS---------FDKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
S D+ KP TY ++K C D R ++ M G P+
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G V+ A ++L+ ++ GM AY I+ + KR K+A LF E
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M P+++TY + R G +Q+ + +M + G L E C
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGG--PIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCS 700
Query: 669 GVIQD 673
++D
Sbjct: 701 LSMED 705
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 151/357 (42%), Gaps = 27/357 (7%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ V D YN+ L A L + ++ ++ + DV T++ +++
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKM----VADAVPPDVSTFNILIRALCK 211
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + A+ + EDM + G+ P+ T+++L+ VE A+ + E M+++GCE S
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271
Query: 436 CNILLQACVEACQFDRAFR-LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N+L+ + + + A R ++ QV +G + T
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNG---------------LCRTG 316
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ F F+ TYN L+ C + +++ M + PN +++
Sbjct: 317 HIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYN 376
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKH 611
LI +VE A ++ +++ G+ PDV + + I+ +C+ S R + A LFEEMK
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR-EIAMELFEEMKE 435
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
P+ TY L+ + S +++ L + ++M +G N LI+ C+
Sbjct: 436 KGCDPDEFTYSILIESLC---SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 445
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 506 TYNIMMDLHAKARNYQSALKLYR----------------------------DMQNA---- 533
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 534 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 639 GLRPSLQTYTLLL 651
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 35/349 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A ++ + A G D T + I N
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMY------QRMQAGGLSPDTFTYSV----------IINC- 478
Query: 495 NFVPNSHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSP 546
H + K F P TYNI+M A +Y L +M+ G P
Sbjct: 479 -LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++I+++ G G +E A + M++ PD Y + + ++ +++A+ +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ M H + PN+ T +LL R + E + L Q+M G + +
Sbjct: 598 QAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELL---QNMLALGLRPS 643
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++ + +A L + ML G P+ Q +LL C +
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQSALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 110/267 (41%), Gaps = 48/267 (17%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ DR++ T +
Sbjct: 426 ----------QEAGCKPDRVT---------------------------------YCTLID 442
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M + G
Sbjct: 443 IHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L E +
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE- 559
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEW 666
AV+ +M + + ++ L++ W
Sbjct: 560 --AVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M +AG + DT+
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRM-QAGGLSPDTFT 471
Query: 660 KELI 663
+I
Sbjct: 472 YSVI 475
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L+ + YG + + + + V+ M +AG K + LI+
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 191/467 (40%), Gaps = 27/467 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D +F +R + + R L A A+ + + ++ C +I G + +Y+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ V +N+Y N ++N D K +Q+ GV D+ +YN L+ A G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
L +E + + + KG V+TY+T++ ++ A +V +ML +G++P++
Sbjct: 285 ---LMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+ SL+ G V + +F +M P+ C + ++ + D+A F S
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ L D T I K S+ + D TY
Sbjct: 401 V----KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD--------VVTY 448
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C +A L NEM L P+ + TILID GN++ A+++ + M+E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ DVV Y T + + + A ++ +M +I P ++Y L+ A G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
V+ +M K +I+ +C + N + GE L
Sbjct: 569 A---FRVWDEMISKNIKPTVMICNSMIKGYC----RSGNASDGESFL 608
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 186/414 (44%), Gaps = 29/414 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP+ R+++ GD +++ ++ D+RS++V ++ F+S+M++ + +L L
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++++ G++ D Y IL++ C G +A + E+ +G +DV TY+TI+
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ---QGC-AMDVVTYNTIL 452
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A K+ +M + P++ T + LI+ G ++ AM LF++M +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N LL + D A ++ +SK + Y + + + H +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADM-VSKEILPTPISYSILVNALCSKGHLAEA-- 569
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ +D+ S KPT N ++K C + ++ + +M + G P
Sbjct: 570 -----------FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ IS+ LI N+ A ++K M E+ G+ PDV Y + + R ++K+A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +M + P+ TY ++ + S + + ++ +M + G+ +D +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMING---FVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 174/429 (40%), Gaps = 57/429 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ T+I G ++ + + + + +Y +N+++N K+ EV
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G+ D +Y LL C G+ V ++++ +++ ++ V+ D+ +S+++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR---SRDVVP-DLVCFSSMMS 383
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F + AL + AG+ P+ + ++ LI G++ AM+L EMLQ GC
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N +L + A +LF T + AL D T I H ++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMT----ERALFPDSYTLTILIDG--HCKLGNLQ 497
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
N +KR TYN L+ D K + +M + + P I
Sbjct: 498 NAMELFQKMK----EKRIRLD--VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 550 SWTILIDA----------------------------CGG-------SGNVEGALQILKIM 574
S++IL++A C SGN L+ M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYITLLRARSRYG 632
+G PD ++Y T I VR + + +AF L ++M+ Q + P++ TY ++L R
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 633 SLHEVQQCL 641
+ E + L
Sbjct: 672 QMKEAEVVL 680
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 219 RADILFCN-FVREFGKKRDLVSA--LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
R D++ N + FGK D+ +A + A SK+ L +P Y I V +C G
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS----ILVNALCSKGHLA 567
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++++ S+N+ + + NS++ + NA D + LE M G + D SYN
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE---KMISEGFVPDCISYN 624
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEA-KGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ N A +G VK +E +G L DVFTY++I+ F + A V
Sbjct: 625 TLIYGFVREENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
M+ GV P+ T++ +IN + + +A + +EMLQ G P+ +
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>gi|356529805|ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1092
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 57/348 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 528 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDV 587
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + LLKAC AG A+E+Y V+ KG ++ Y+
Sbjct: 588 LAEMTAETQPIDPDHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEV----YTIA 643
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V DM G+ P+ I S+LI+ +A ++ A + +E + G
Sbjct: 644 INSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEARKGGI 703
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ L+ AC A + +A L+
Sbjct: 704 LIGIMSYSSLMGACSNARNWQKALELYE-------------------------------- 731
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL + EM+ +GL PN
Sbjct: 732 ---------------YLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLRPN 776
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I+++ILI A ++E A +L + ++DG+ P+++ I +C R
Sbjct: 777 SITFSILIVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCIIGMCQR 824
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 153/342 (44%), Gaps = 19/342 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L+ D Y+T++ A + +
Sbjct: 460 LSTFNMLMSVCASSQDS----EGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMF 515
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI+ CA AG V +A + M +P+ N L+ AC
Sbjct: 516 EVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAAC 575
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + T ++TQ D + I + ++ T
Sbjct: 576 AQSGALDRAFDVLAEMT-AETQ-----PIDPDHVTIGAL----LKACTKAGQVERAKEVY 625
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++++ K Y I + +C D+ + N+M G+ P+ I + LID G +
Sbjct: 626 KMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHA 685
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A +L+ R+ G+ +++Y++ + C ++ ++A L+E +K ++ + T
Sbjct: 686 KKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTV 745
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LL A + Q+ L V +M G + N LI
Sbjct: 746 NALLTALC---DGDQFQKALEVLFEMKGLGLRPNSITFSILI 784
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ + L PN + ++ +L+ C S + EGA Q+L+++++ + PD YTT I
Sbjct: 443 KAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLYTTLI 502
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
C +S ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 503 LTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIMRSK 559
Query: 651 GYKANDTYLKELI 663
K + LI
Sbjct: 560 NVKPDRVVFNALI 572
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R P +T+N+LM C + ++V L+ + R L P+ +T LI C SG
Sbjct: 453 RLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDAR---LEPDCKLYTTLILTCAKSG 509
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V +
Sbjct: 510 KVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFN 569
Query: 623 TLLRARSRYGSLHEVQQCLA 642
L+ A ++ G+L LA
Sbjct: 570 ALIAACAQSGALDRAFDVLA 589
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/507 (20%), Positives = 218/507 (42%), Gaps = 33/507 (6%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
+ +C R+ N + E G+ +++ S L D+ + P++ T++ I
Sbjct: 66 KTSCRTVRSRTKLMNIMIEKGRPQEVQSIL---DSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ +I + + + FN+++N + +++ ++ + M++ G +++N
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K +AG +Q++ + E ++ ++ TY+ +V+ + + K A V M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDEN---VRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+++G+ P+ +T++++ A A G QA + EM + +PN + C I++ + +
Sbjct: 240 VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKI 299
Query: 450 DRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
A + + L V G D + D+ + +
Sbjct: 300 KEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAV------DRDGVNEVLTLM--------- 344
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F KP T++ +M A + + + + ++M + P+ ++IL +G
Sbjct: 345 EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEP 404
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A +IL M + G P+VV +TT I + R++ A +FE+M I PNL T+ TL
Sbjct: 405 EKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETL 464
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW-CEGVIQDKNQNQGEVTL 683
+ YG + + V Q M + + T L + E W G+ ++ N+ V
Sbjct: 465 IWG---YGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKN 521
Query: 684 CRRTN-SQRPQSLLLEKVAVHLQKSAA 709
T+ + R + + + H QK +A
Sbjct: 522 EEMTHETDREDKIPVGSLEKHYQKPSA 548
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 189/495 (38%), Gaps = 84/495 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC + + + L +A++ +K PN+ +C T I V + K+ E ++
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------ 335
+ N+ +N L+ + H ++ +E+ M G D SY ++ C
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240
Query: 336 --------------LAGNTVLAQEIYGEVKHLEAKGVLK-----------LDVFTYSTIV 370
LA I+ KH A L+ +D YS IV
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ +M + G P+ +T++++IN + AG V QA + ++M + GC+
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCK 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN T+S T G GN+ M K +
Sbjct: 361 PN---------------------------TVSYTAFLKGLCQKGNSSEAREM-MKASEEQ 392
Query: 491 TNTPNFVPNS---HYSSFDKRFS-------------FKPTTTTYNILMKACCT--DYYRV 532
TPN + S H + + S F PT N+L+++ C
Sbjct: 393 WWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K M E +G + N +++T +I ++E AL +L M PD V YTT I
Sbjct: 453 KKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDA 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ R+++A L +M I P VTY T++ RYG + V+ L + M
Sbjct: 513 LGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIH---RYGQIGRVEDLLNLLDKMLTR-- 567
Query: 653 KANDTYLKELIEEWC 667
+ T ++IE+ C
Sbjct: 568 QECRTAFNQVIEKLC 582
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 128/312 (41%), Gaps = 25/312 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y ++ V + K Q A +V M+ G+ + ++ + + AG + AM +
Sbjct: 82 DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--- 472
M +AG EPN CN + V A ++A R L T L + Y
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201
Query: 473 ---DGNTDRISNMEHK----DKQSITNTPNFVPNSH-----YSSFDKRFSFK--PTTTTY 518
+ + IS M K DK S F+ + +K K TY
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ C + +AL + E + G + + ++ ++D+ G ++ A +I+ M
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G PDVV YT I ++ + QA + ++M + +PN V+Y L+ + G+ E
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381
Query: 637 VQQCLAVYQDMW 648
++ + ++ W
Sbjct: 382 AREMMKASEEQW 393
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ M+ +G+ PN +++ LI VE A++++ M G SPD V+Y T +
Sbjct: 175 FLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLC 234
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+++R+++ + E+M+ ++ + VTY TL+ ++ E Q L Q K G++
Sbjct: 235 KNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQ---KRGFQV 291
Query: 655 NDTYLKELIEEWCE 668
+ +++ +C+
Sbjct: 292 DKVGYSAIVDSYCK 305
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 34/318 (10%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K++ KG K V + + +++ + AK ++ A V M ++G P+ +T+ ++ +
Sbjct: 165 LKYMNKKG-YKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFV 223
Query: 410 NAGLVEQAMHLFEEML---QAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
++A +FE++L +A +P+ + ++++ +A + +A +LF R L
Sbjct: 224 EGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPL 283
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
S ++ N +S++ Y +R + KP +Y++L
Sbjct: 284 STVTFNSLMSFETNYKEVSSI-------------------YDQM-QRTALKPDVVSYSLL 323
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+KA +AL EM G+ P S+ ILIDA SG VE A + K MR +
Sbjct: 324 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRV 383
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD+ +YTT + V + + A F +K ++PN+V Y TL++ Y L+ V++
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKG---YSKLNNVER 440
Query: 640 CLAVYQDMWKAGYKANDT 657
+ VY+ M G + N T
Sbjct: 441 VMRVYERMRMQGVEPNQT 458
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 126/334 (37%), Gaps = 89/334 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +I + GDY ++R ++ + + + L+ FNSLM+ + K +Y
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFET-NYKEVSSIYD 306
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ + D+ SY++L+KA YG+ + E
Sbjct: 307 QMQRTALKPDVVSYSLLIKA-------------YGKARREEE------------------ 335
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL V E+ML AGV P +++ LI+A A +GLVE+A +F+ M + EP+
Sbjct: 336 --------ALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDL 387
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
++ A V A D A + FR RI
Sbjct: 388 CSYTTMVLAYVNASDMDGAEKFFR--------------------RI-------------- 413
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
K KP Y LMK + RV + MR G+ PN +
Sbjct: 414 -------------KEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T ++D G + + A+ K M G D A
Sbjct: 461 TTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKA 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F N + F VS++ YD ++ P++ +I G ++
Sbjct: 281 IPLSTVTF-NSLMSFETNYKEVSSI--YDQMQRTALKPDVVSYSLLIKAYGKARREEEAL 337
Query: 277 AIYEDL---------RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
A++E++ +S N+ ++ + + L+ AH V+K M++ V D+ SY
Sbjct: 338 AVFEEMLDAGVRPTRKSYNILIDAFAISGLVE-EAHT------VFKAMRRHRVEPDLCSY 390
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
++ A A + A++ + +K + LK +V Y T++K ++ + ++V E
Sbjct: 391 TTMVLAYVNASDMDGAEKFFRRIK----EDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
M GV PN ++++++ A+ F+EM G + + NILL
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILL 499
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +L+ A G G+ A ++LK M + G P V++ T ++ R+K+ ++A ++F
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ +P+ VTY +L++ + + ++ A+++D+
Sbjct: 201 RRMQTSGPEPSAVTYQIILKS---FVEGDKYKEAEAIFEDL 238
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ R + ++ M G P+ IS T L++A G + A + + M+ G P V Y
Sbjct: 157 DFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQ 216
Query: 588 TAIKVCVRSKRLKQAFSLFEEM---KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+K V + K+A ++FE++ K +P+ + ++ + G + ++ A
Sbjct: 217 IILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFA 274
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 197/453 (43%), Gaps = 39/453 (8%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+ LAI C + R ++L + + +G + A D ++H S + I +I +
Sbjct: 625 LRLAISQGCELDRENLL--SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIM- 681
Query: 267 GICGDYMKSRAIYEDLRSQNVTL---NIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVM 321
+C + A+ E ++++ L + ++ SL+ + F +++ +M+ GV
Sbjct: 682 -LCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 740
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
Y ++ C G A + + E KG+L DV ++ +++ + K WQ
Sbjct: 741 PSDHLYRSMVVTYCKMGFPETAHYL---IDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 797
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A + + + W++LI+A A +G E+A +F M++ G P N L+Q
Sbjct: 798 AESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 857
Query: 442 ACVEACQFDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
A + + D + + + + +SK+ + L D + I ++ K Q + F
Sbjct: 858 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVK-KIYQGMKAAGYF 916
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
PT Y I++ A V+A+++EM P+ W +
Sbjct: 917 ----------------PTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSV 960
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ G G+ + Q+ ++++E G+ PD Y T I + R +R ++ SL EM+ +
Sbjct: 961 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 1020
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L TY +L+ A +G L V+Q +++ +
Sbjct: 1021 EPKLDTYKSLISA---FGKLQMVEQAEELFEGL 1050
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 195/433 (45%), Gaps = 32/433 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G+ AL Y+ + +H SPN + TI+ V G + I+
Sbjct: 188 FCFVVKWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-- 244
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ N + V+N++M V A +FT E+ M+ G D+ S+N L+ A +G
Sbjct: 245 RAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGT 304
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V LA E+ EV+ + ++ D+ TY+T++ + + A+KV DM++ P+
Sbjct: 305 MVTNLAIELLNEVR----RSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 360
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ G+ +A LF+++ G P++ N LL A D+ +
Sbjct: 361 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 420
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-PTTT 516
++ G+D + + I +M K Q + + YS D + S + P
Sbjct: 421 D----MVKMGFGKD-EMTYNTIIHMYGKRGQ------HDLAFQLYS--DMKLSGRSPDAV 467
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY +L+ + +A +M+EM + P +++ LI +G A + M
Sbjct: 468 TYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCM 527
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PD +AY+ + + +R +A L++EM + +P+ Y +LR +
Sbjct: 528 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 587
Query: 635 HEVQQCLAVYQDM 647
+V + V +DM
Sbjct: 588 EDVHK---VVKDM 597
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+R + I P DI+ N + ++ +L A++ Y+ H P+++ +I V G C
Sbjct: 317 VRRSGIQP--DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRC 374
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G ++ +++DL S+ + +NSL+ A + + E+ ++M K+G D +Y
Sbjct: 375 GMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTY 434
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ G LA ++Y ++K L + D TY+ ++ A + A +V
Sbjct: 435 NTIIHMYGKRGQHDLAFQLYSDMK-LSGRSP---DAVTYTVLIDSLGKANMIKEAAEVMS 490
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML+A V P T+S+LI A AG +A F+ ML++G +P+ +++L +
Sbjct: 491 EMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 550
Query: 448 QFDRAFRLFRSWTL 461
+ +A +L++ L
Sbjct: 551 ESGKAMKLYQEMVL 564
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVK----ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+P ++N L+ A V L+NE+R G+ P+ I++ LI AC N+E A
Sbjct: 286 EPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEA 345
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++ M PD+ Y I V R ++A LF++++ P+ VTY +LL A
Sbjct: 346 VKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA 405
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+R G++ +V++ + +DM K G+ ++ +I
Sbjct: 406 FAREGNVDKVKE---ICEDMVKMGFGKDEMTYNTII 438
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 160/389 (41%), Gaps = 49/389 (12%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY---KN 314
+ +I G Y ++RAI+ + + + N LM D + E+Y +
Sbjct: 816 VWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLD-ELYVVIQE 874
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK--------HLE-------AKG-- 357
+Q +G +S ++L A AGN ++IY +K HL AKG
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 934
Query: 358 --------------VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
K D+ +++++K++ ++ +V + + AG+ P+ T+++
Sbjct: 935 VRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 994
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI E+ + L EM + G EP L+ A + ++A LF LSK
Sbjct: 995 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEG-LLSK 1053
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ DR + H + N+ N K +PT T ++LM
Sbjct: 1054 ---------ECKLDR--SFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1102
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ +A +++ ++ GL + + ++ +IDA +G+ A+Q L M++DG+ P
Sbjct: 1103 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1162
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
D +T ++ S+ +A L + ++
Sbjct: 1163 DHRIWTCFVRAASLSQHTSEAIVLLKALR 1191
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 178/404 (44%), Gaps = 50/404 (12%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A KV + M S G+ PN IT+++
Sbjct: 288 FKLFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI+ G + +A+ L ++ G P+ NIL+ + A ++ +
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ +++ Y D + M++ +K +P + P TY++
Sbjct: 404 IKPSKIT----YTILIDTFARMDNMEKAIQLRSPM-----------EELGLTPDVHTYSV 448
Query: 521 LMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
L+ C +K MNE M L PN + + ++ G+ AL++ +
Sbjct: 449 LIHGFC-----IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
M E + P+V +Y I+V + ++ K+A L E+M I P+
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 176/390 (45%), Gaps = 31/390 (7%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F ++ A +++ + ++ +++ G ++ Y L+ CC G A+
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ K L + +TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEM----GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTL 461
+N G + A LF+EM + G N N L+ C E A + ++ +S +
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYNIL
Sbjct: 335 NPNLITYNTLIDGFCGV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNIL 379
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ I++TILID N+E A+Q+ M E G+
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PDV Y+ I C++ ++ +A LF+ M +++PN V Y T++ + GS +
Sbjct: 440 TPDVHTYSVLIHGFCIKG-QMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSY--- 495
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L ++++M + N + +IE C+
Sbjct: 496 RALRLFREMEEKELPPNVASYRYMIEVLCK 525
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 28/274 (10%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +INA + ++ ++ F EM+ G P S C N LL V + F++ +R F
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
SK +V D D + I + I SFD + F F P
Sbjct: 155 -SKIKV----DLDVYSFGIVIKGCCEAGEIE-----------KSFDLLVELREFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM GL N ++T+LI +G + ++ +
Sbjct: 199 VIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+EDG+ P++ Y + + R K AF LF+EM+ + N+VTY TL+ R
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+E + V M G N LI+ +C
Sbjct: 319 ANEANK---VMDQMKSDGINPNLITYNTLIDGFC 349
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E+K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A LF EM + G N +L+ + + F ++ L Y
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNL---YT 270
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
N + N KD ++ + FD + TYN L+ C +
Sbjct: 271 YNC--VMNQHCKDGRT---------KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A +M++M++ G++PN I++ LID G G + AL + + ++ G+SP +V Y
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + A + +EM+ I+P+ +TY L+ +R ++ + Q
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQ 429
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKL 318
I V G C GD + + +++ + + + + L++ A +++ +++ M++L
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADA 376
G+ D+ +Y++L+ C+ G A ++ + K LE V+ Y+T+V +
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVI------YNTMVLGYCKE 491
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
AL++ +M + PN ++ +I ++A L E+M+ G +P+
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551
Query: 437 NILLQA 442
N++ +A
Sbjct: 552 NLISRA 557
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 44/415 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE--QAMHLFEEMLQAG 428
+A + + +L+V + M G P T++ LIN GLVE QA+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-----GLVEKRQAVEILDEMTLAG 651
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SN 481
N ++Q +AF F V + Y+ + R+ S
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSA 710
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
+ + S N P R SF YNIL+ D + L+ +M
Sbjct: 711 LAVTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQM 752
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 867
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 191/462 (41%), Gaps = 62/462 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSS 504
K V L + + NM+ K+ Q + + P F+P + + S
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTI 553
D R S + PT T+N L+ V+ +++EM G+S N ++T
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVE-ILDEMTLAGVSANEHTYTK 661
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 662 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 721
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I N Y L+ +R G + E + Q M K G K +
Sbjct: 722 IPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 760
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 197/477 (41%), Gaps = 69/477 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K +A +D +K+ + N I II C C + ++ A+
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
I ++++I+A G +++A+ +EM + P ++ ++ ++ R+ +F
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 457 -RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T +G ++ +E D+ ++ N H
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVS---ANEH-------------- 657
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK- 572
TY +M+ A D + ++ GL + ++ L+ AC SG ++ AL + K
Sbjct: 658 -TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 716
Query: 573 ----------------------------------IMREDGMSPDVVAYTTAIKVCVRSKR 598
M+++G+ PD+ YT+ I C ++
Sbjct: 717 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 776
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 777 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMGIKPD 830
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 159/363 (43%), Gaps = 50/363 (13%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G D+ +YNIL+ C G+ A+++ V + +G + +V TY+ +V
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL---VNEMSRRGC-EPNVITYAILVNG 434
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + A V +M + G+T N++ ++ LI A V A++L EM GC+P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N L+ + + D AFRLF + L DG ++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLL-----------DG--------------AVAN 529
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTT---------------TYNILMKACCT--DYYRVKAL 535
N N+ + +R +F+ T TYN L+KA C + + L
Sbjct: 530 --NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M GL + IS I+I+ G V+ A + L+ G PD+V Y + + +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
R+K+A +LF+ ++ ++P+ TY T + + + G +++ C Y+ + +N
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA--CSFFYRGIENGFVPSN 705
Query: 656 DTY 658
T+
Sbjct: 706 LTW 708
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 163/394 (41%), Gaps = 34/394 (8%)
Query: 276 RAIY---EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
RA+Y +S ++ L I V + V + V+ +M GV + ++ I++K
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATN-------VFYDMLSKGVSPTVFTFGIVMK 226
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C+ A + ++ + G + + Y T++ + ALK+ E+M
Sbjct: 227 ALCMFNEVDSACSL---LRDMTKHGCVP-NSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ T++ +I+ + A L + ML G P++ LL + + A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + L +G + + + K+ QS N F F+
Sbjct: 343 RKILIKIPCPNNAI-LNTLING---YVMSGQLKEAQSFLNETMI-----------NFGFQ 387
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNILM C + + L+NEM G PN I++ IL++ +G +E A +
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G++ + V Y I R +++ A +L EM +P+L TY +L+ +
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ + + ++ +M G AN+ LI
Sbjct: 508 ---VDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 67/382 (17%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
RDLV+ + + PN+ +++ G+C G ++ + ++ ++ +T+N
Sbjct: 410 RDLVNEM------SRRGCEPNVITYAILVN--GLCKAGLLEEAGLVLHEMSARGLTINSV 461
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+ + L + M G D+ +YN L+ C E +
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI---DEAFRLF 518
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
++ G + +V TY+T++ +Q AL + DML G T + IT++ LI A
Sbjct: 519 HNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + L+E+M+ G ++ CNI++ + + D AF R
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR------------- 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D I+ F P TYN ++ C
Sbjct: 625 ------DAINR----------------------------GFVPDIVTYNSVLNGLC-KVG 649
Query: 531 RVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K +N ++ G+ P+ ++ I G V A E+G P + +
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ + F + +E+
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 535 LMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ +MR V L P S+ ++++ + A + M G+SP V + +K
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ A SL +M + PN + Y TL+ A S+ ++V + L + ++M+ G
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK---NQVSEALKLLEEMFVMGCM 285
Query: 654 ANDTYLKELIEEWCE 668
+ ++I C+
Sbjct: 286 PDVQTFNDVIHGLCK 300
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 43/362 (11%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + M++ + D Y+I++ C G+ A ++ E +E KG K D+ Y
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE---MEIKG-FKADIIIY 285
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+++ F A W K+ DM+ +TP+ + +S+LI+ G + +A L +EM+Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ L+ + Q D+A + + M K
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHM-----------------------LDLMVSKG 382
Query: 487 KQSITNTPNFVPNSHYSS--------FDKRFSFKPT---TTTYNILMKACCT--DYYRVK 533
T N + N + + ++ S + T TYN L++ C K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L EM + + P+ +S+ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ ++ A+ LF + ++P++ TY ++ + GSL E +++ M + G+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD---LLFRKMEEDGHS 559
Query: 654 AN 655
N
Sbjct: 560 PN 561
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 153/383 (39%), Gaps = 58/383 (15%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+F+ + +DL L++ K M+ G+ ++ + +I++ CC LA G++
Sbjct: 78 LFSVVARTKQYDL--VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L + D T+ST++ AL++ + M+ G P IT ++L+N G
Sbjct: 136 LGYEP----DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V A+ L + M++ G +PN +L+ ++ Q A L R
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR--------------- 236
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
ME + K Y+I++ C D
Sbjct: 237 --------KMEER------------------------KIKLDAVKYSIIIDGLCKDGSLD 264
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A L NEM G + I +T LI +G + ++L+ M + ++PDVVA++ I
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V+ +L++A L +EM I P+ VTY +L+ + L + L + M
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL---MVSK 381
Query: 651 GYKANDTYLKELIEEWCEGVIQD 673
G N LI +C+ + D
Sbjct: 382 GCGPNIRTFNILINGYCKANLID 404
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 234/541 (43%), Gaps = 80/541 (14%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
++ + + L +GR+ E +V+ +V + ++++L + +G+ + G++ V
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMV----EMGHKPTLITLNALVNGLCLN---GKVSDAV 197
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ ++ E G P E+ G K++ C+ SG+ + + L+ +EE ++ + +
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVM---CK----SGQTALAMELLRKMEERKIKLDAVKY 250
Query: 194 EFRIVQLCVNKP---DVNLAIRYACIVPRADIL-FCNFVREF---GKKRDLVSALRAYDA 246
I LC + NL +ADI+ + +R F G+ D LR D
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR--DM 308
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K+ ++ P++ +ID G ++ +++++ + ++ + + SL++ +
Sbjct: 309 IKRKIT-PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + M G ++ ++NIL+ C A E++ + + +GV+ D
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF---RKMSLRGVVA-DTV 423
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T+++ F + ++A ++ ++M+S V P+ +++ L++ + G E+A+ +FE++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ E + NI++ A + D A+ LF S L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK---------------------- 521
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
KP TYNI++ C +A L +M
Sbjct: 522 -------------------------GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G SPN ++ ILI A G G+ + ++++ ++ G S D + + + RLK++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM-LSDGRLKKS 615
Query: 603 F 603
F
Sbjct: 616 F 616
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 159/396 (40%), Gaps = 40/396 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + N+Y + ++N L + KLG D +++ L+ CL G
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ + + K L T + +V A+ + + M+ G PN +T+
Sbjct: 161 ALELVDRMVEMGHKPTL----ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++ +G AM L +M + + ++ +I++ + D AF LF +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 463 K--------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------------- 500
T + G Y G D + + +D TP+ V S
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKL-LRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 501 ----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
H + S P T TY L+ C + KA +++ M + G PN ++ IL
Sbjct: 336 AEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ + ++ L++ + M G+ D V Y T I+ +L+ A LF+EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+P++V+Y LL G E ++ L +++ + K+
Sbjct: 454 RPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 51/268 (19%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S + V A K + + L + + M G+ N T S +IN C + A
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EP++ + L+ C+E + A L DR+
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 170
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M HK PT T N L+ C + A L++ M
Sbjct: 171 MGHK---------------------------PTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++ ++ SG A+++L+ M E + D V Y+ I + L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA 627
AF+LF EM+ + +++ Y TL+R
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 21/337 (6%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+TLN V +N D ++ M + G + +Y +LK C +G T LA E+
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLID---RMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E + + KLD YS I+ A + +M G + I +++LI
Sbjct: 235 ---LRKMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG + L +M++ P+ + L+ V+ + A L + Q
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QR 346
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ D T I +++ N H P T+NIL+ C
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKAN--------HMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
L +M G+ + +++ LI G +E A ++ + M + PD+V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+Y + + ++A +FE+++ +++ ++ Y
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 14/202 (6%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM P I ++ L + + L + K M G++ ++ + I C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R ++L AFS ++ +P+ VT+ TL+ G V + L + M + G+K
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG---RVSEALELVDRMVEMGHKP 175
Query: 655 NDTYLKELIEEWC-EGVIQDKNQNQGEVTLCRRT--NSQRPQSLLLEKVAVHLQKSAAEN 711
L L+ C G + D V L R +P + V + KS
Sbjct: 176 TLITLNALVNGLCLNGKVSDA------VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 712 LAIDLRGLTKVEARIIVLAVLR 733
LA++L L K+E R I L ++
Sbjct: 230 LAMEL--LRKMEERKIKLDAVK 249
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + +I+ FN +++ + K F ++ + M + G D+ SY IL+
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAG 393
AG A EI+ + + + D + +V A+ +A + V E++ SA
Sbjct: 160 FRAGKVTDAVEIWNAM----IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V +T+ +++LI+ AG +E+A L M + GCEP+ N+LL + RA
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S Q+ Y+ R + H DK P
Sbjct: 276 GVMAEMVRSGIQLD-AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD---------- 324
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y+ L++ C ++ + L EMR G+ N +++T LI A GN A ++L
Sbjct: 325 -VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+SPD + YTT + +S + +A+ +F +M ++I P+ ++Y +L+ R
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 632 GSLHEVQQCLAVYQDM 647
G V + + +++DM
Sbjct: 444 G---RVTEAIKLFEDM 456
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
YM DL + NV LN Y N++ LK V M + G+ D SYN LL
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNM-------LKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 332 KACCLAGNTVLAQEIYG-EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
K C + + Y VK +E +G DV +YST+++ F A + A ++ E+M
Sbjct: 298 KRHCRVSH---PDKCYNFMVKEMEPRGF--CDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ N +T++SLI A G A L ++M + G P+ +L ++ D
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 451 RAFRLF 456
+A+ +F
Sbjct: 413 KAYGVF 418
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 45/365 (12%)
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA+ IY ++K + L FTYS + K + + + DM + G P+ +
Sbjct: 62 LAEAIYWDMKPMG----FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAF 117
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ V A+ F M+Q G EP+ IL+ A + A ++ +
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177
Query: 462 SKTQ--------VALGEDYDGNTDRISNMEHKD-KQSITNTPNFVPNSHYSSFDK----- 507
S + +G + D M ++ K + V N+ S F K
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237
Query: 508 ----------RFSFKPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSPNHIS 550
+ +P TYN+L+ +YY R + +M EM G+ + S
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLL-----NYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 551 WTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ L+ C S + ++K M G DVV+Y+T I+ R+ ++A+ LFEEM
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ + N+VTY +L++A R G+ ++ L M + G + + +++ C+
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL---DQMTELGLSPDRIFYTTILDHLCKS 408
Query: 670 VIQDK 674
DK
Sbjct: 409 GNVDK 413
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + + +++ M++ G++ ++ +Y L+KA GN+ +A+++ ++ L L
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG----LSP 393
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+TI+ + A V DM+ +TP+ I+++SLI+ +G V +A+ LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M C P+ ++ + + A++++
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
K+ ++E++R + + +N+ + SL+ + ++ ++ M +LG+ D Y +L
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +GN A ++ ++ E + D +Y++++ + A+K+ EDM
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHE----ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +T+ +I + A ++++M+ G + + L++A
Sbjct: 459 KECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 174/421 (41%), Gaps = 39/421 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
EFG D A++ + +KKH C+ +++ M + Y ++
Sbjct: 174 EFGYVSD---AIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPP 230
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+Y FN LMN +K ++ ++K G+ S+N L+ C +GN +E +
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN---LEEGF 287
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+E V DVFTYS ++ + A + ++M G+ PN +T+++LIN
Sbjct: 288 RLKMVMEEFRVFP-DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT------- 460
G V+ A+ ++++M G + + N L+ + F A + T
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406
Query: 461 -LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T + G +G+ + M + + N +
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN--------------------VAFT 446
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C D V A + EM GL P+ ++T+++D G+V+ ++LK M+ D
Sbjct: 447 AIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD 506
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P V+ Y + + ++K A L M + + P+ +TY LL+ ++G L +
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDF 566
Query: 638 Q 638
Q
Sbjct: 567 Q 567
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P T+N+LM C + + + +E+R GL P +S+ LI+ SGN+E
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ +M E + PDV Y+ I + +L+ A LF+EM + PN VT+ TL+
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVT 682
+ + G V L +YQ M+ G KA+ LI+ C+ G ++ + GE+T
Sbjct: 347 QCKNG---RVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMT 399
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 53/304 (17%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+AL+ ++L +G PN T++ L+N G V+ A +F+E+ + G +P + N L+
Sbjct: 215 VALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
++ + FRL ++ + E
Sbjct: 275 NGYCKSGNLEEGFRL---------KMVMEE------------------------------ 295
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
F P TY+ L+ C + A L EM GL PN +++T LI+
Sbjct: 296 --------FRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQ 347
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G V+ AL+I + M G+ D+V Y T I + ++A EM + P+
Sbjct: 348 CKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDK 407
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQN 677
TY TLL + G L + L + ++M K G + ++ +I C +G I D +
Sbjct: 408 FTYTTLLDGSCKEGDL---ELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERT 464
Query: 678 QGEV 681
E+
Sbjct: 465 LREM 468
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 152/357 (42%), Gaps = 30/357 (8%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+EG++ + ++ + G+ P + S L+ C+ SG +E L V+EEF
Sbjct: 244 KEGKVKDAQLIFDEIRKTGLQPTAV---SFNTLINGYCK----SGNLEEGFRLKMVMEEF 296
Query: 185 RLPVKELDEEFRIVQLC--VNKPDVNLAIRYAC---IVPRADILFCNFVREFGKKRDLVS 239
R+ I LC D N + C +VP D+ F + K +
Sbjct: 297 RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPN-DVTFTTLINGQCKNGRVDL 355
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL Y ++ + T+ID G+C G + ++R ++ + + + + + +L
Sbjct: 356 ALEIYQQMFTKGLKADLVLYNTLID--GLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413
Query: 298 MNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ + DL+ LE+ K M K G+ D ++ ++ C G V A+ E+
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM----L 469
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ LK D TY+ ++ F +M K+ ++M S G P IT++ L+N G V+
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
A L ML G P+ NILLQ C+ + + KT++ L DY
Sbjct: 530 NADMLLNAMLNLGVVPDDITYNILLQG---HCKHGK----LGDFQNVKTEMGLVSDY 579
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 184/424 (43%), Gaps = 36/424 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLK 332
+R E+ R + + +N LM+ + T+ ++ K G+ D+ +ILLK
Sbjct: 103 NRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLK 162
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-- 390
CL + + ++ + H + ++ D +Y+T+VK + Q AL + M+
Sbjct: 163 --CLY-HAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKK 219
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN +T++++I+ G V +A +LF EM+Q G P+ ++ A +A D
Sbjct: 220 SGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMD 279
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSH 501
+A + R + Q + G G + M ++ S PN V NS+
Sbjct: 280 KAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGM-FREMTSQGLMPNIVTCNSY 338
Query: 502 YSS-------------FDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGL 544
SS FD + KP TY++L+ T+ + + L N M G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ + I+IDA G G ++ + I M+E G+ PD Y I R RL A
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F +M ++P + Y +L++ +G+L + ++ V + M + + N + +I
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKEL--VSEMMSRGIPRPNIVFFNSIIN 516
Query: 665 EWCE 668
C+
Sbjct: 517 SLCK 520
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 19/325 (5%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K T +++ M G+M ++ + N + + C G + A E + + AKG K ++ T
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF---DSMAAKG-HKPNLVT 369
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YS ++ +A + L + M G+ + ++ +I+A G++++ M +F +M
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G P++ I++ A F R RL + +A+G +G + H
Sbjct: 430 EQGVIPDACTYGIVIAA------FSRMGRLADAMDKFNQMIAMGLKPEGI------VYHS 477
Query: 486 DKQSITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
Q N V S R +P +N ++ + C + V+A + + + +
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ I++ LID G G +E A +L M G+ PDVV+Y T I R+ R+
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM ++P +TY +L
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHG 622
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 190/429 (44%), Gaps = 55/429 (12%)
Query: 268 ICGDYMKSRAIYEDL------RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+C D RA+ DL +S + N+ +N++++ ++ ++ M + G
Sbjct: 200 LCEDSRSQRAL--DLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQG 257
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ D+ +Y ++ A C A A+ + ++ + + G + + TY+ ++ ++ + W
Sbjct: 258 VVPDVVTYTSIIDALCKARAMDKAELV---LRQMISNG-FQPNKVTYNCMIHGYSISGQW 313
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M S G+ PN +T +S +++ G ++A F+ M G +PN ++L
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 440 LQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT----DRISN--MEHKDKQSITN 492
L E C D LF S +GN R+ N ++ K+ + +
Sbjct: 374 LHGYATEGCFVD-MLNLFNSM-------------EGNGIVADQRVFNIVIDAYGKRGMMD 419
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSP 546
+ ++ ++ P TY I++ A + R+ L N+M +GL P
Sbjct: 420 ETMLI----FTQMQEQ-GVIPDACTYGIVIAA----FSRMGRLADAMDKFNQMIAMGLKP 470
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMS-PDVVAYTTAIKVCVRSKRLKQAFSL 605
I + LI GN+ A +++ M G+ P++V + + I + R+ +A +
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F+ + H +P+++T+ +L+ YG + ++++ V M AG + + LI+
Sbjct: 531 FDFVIHIGERPDVITFNSLIDG---YGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587
Query: 666 WCE-GVIQD 673
+C G I D
Sbjct: 588 YCRNGRIDD 596
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 164/411 (39%), Gaps = 57/411 (13%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG 319
+ID G G ++ I+ ++ Q V + + ++ + L ++ + M +G
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + Y+ L++ C+ GN V A+E+ V + ++G+ + ++ +++I+
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKEL---VSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A + + ++ G P+ IT++SLI+ G +E+A + + M+ AG EP+ N L
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + D LF LSK
Sbjct: 585 IDGYCRNGRIDDGLILF-GEMLSK------------------------------------ 607
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV--KALMNEMRTVGLSPNHISWTILIDA 557
KPTT TY I++ D V K + +EM G + + + I++
Sbjct: 608 ----------GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + A+ + K + + ++ T I + ++ ++A LF+ + + PN
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
TY +++ + GS+ E ++ M K+G + L +I E
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSL---MEKSGCAPSSRLLNYIIRVLLE 765
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 157/392 (40%), Gaps = 69/392 (17%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTL-NIYVFNSLMN--------VNAHDLKFTLEVYKNM 315
G C G+ +K++ + ++ S+ + NI FNS++N V AHD ++ +
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHD------IFDFV 534
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+G D+ ++N L+ L G ++ +G + + + G+ + DV +Y+T++ +
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKI---EKAFGVLDAMISAGI-EPDVVSYNTLIDGYCR 590
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
L + +MLS GV P TIT+ +++ N G A + EM+++G +
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 436 CNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
C I+L C C D A +F+ ++ M K +I NT
Sbjct: 651 CGIILGGLCRNNCD-DEAIAMFK--------------------KLGAMNVKFNIAIINT- 688
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
D + + K L + + GL PN ++ ++
Sbjct: 689 ---------MIDAMYKVRKRE---------------EAKELFDSISATGLVPNASTYGVM 724
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G+VE A + +M + G +P I+V + + +A + ++ +I
Sbjct: 725 IKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRI 784
Query: 615 QPNLVTYITLLRARSRYGSLHE-VQQCLAVYQ 645
T L+ SR G E V+ A YQ
Sbjct: 785 SLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 13/212 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEM--RTVGLSPNHISWTILIDACGGSGNVEGA 567
+P T +YN ++K C D +AL ++ M ++ G SPN +++ +I G V A
Sbjct: 187 EPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKA 246
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M + G+ PDVV YT+ I +++ + +A + +M QPN VTY ++
Sbjct: 247 CNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHG 306
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRT 687
S G E ++++M G N + C+ K++ E
Sbjct: 307 YSISGQWKETA---GMFREMTSQGLMPNIVTCNSYMSSLCK---HGKSKEAAEFFDSMAA 360
Query: 688 NSQRPQSLLLEKVAVHLQKSAAENLAIDLRGL 719
+P L +V L A E +D+ L
Sbjct: 361 KGHKPN---LVTYSVLLHGYATEGCFVDMLNL 389
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 513 PTTTTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYNILM CC T V AL GL + I +IL+ + + + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 571 L-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRA 627
L M E G+ PD ++Y T +K R ++A L M K PN+VTY T++
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
R G EV + ++ +M + G + +I+ C+ DK +
Sbjct: 237 LFREG---EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAE 282
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 36/271 (13%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR +I+F N + K+ +V A +D P++ ++ID G+ G K+
Sbjct: 503 IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKA 562
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
+ + + S + ++ +N+L++ + + L ++ M GV +Y I+L
Sbjct: 563 FGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHG 622
Query: 334 CCLAGNTVLAQEIYGEV--------------------------------KHLEAKGVLKL 361
G TV A+++ E+ K L A V K
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNV-KF 681
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
++ +T++ + + A ++ + + + G+ PN T+ +I G VE+A ++F
Sbjct: 682 NIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMF 741
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
M ++GC P+S+ N +++ +E + +A
Sbjct: 742 SLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 178/438 (40%), Gaps = 67/438 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K RD A R D +K P+ + TII G+C + A+ Y
Sbjct: 34 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK--GLCDNGRVDSALVHY 91
Query: 280 EDLRSQN----VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
D++ +T I V + D LE +M + G ++ +YN L+ C
Sbjct: 92 RDMQRHCAPSVITYTILVDALCKSARISDASLILE---DMIEAGCAPNVVTYNTLINGFC 148
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
GN A ++ ++ + DVFTY+ ++ + + Q K+ ++M+ G
Sbjct: 149 KLGNMDEAVVLFNQM----LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN IT+++L+++ +G A +L + ML+ C+P+ N+++ + Q D A+ L
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ T D+ + P
Sbjct: 265 FQLMT-------------------------DRGCL----------------------PDI 277
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYNI++ C + L+ M G P+ +++ ++ + V+ A ++ ++
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+R G DVV +T I +S+RL A L EM+ P++V Y L+ +
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG---FCK 394
Query: 634 LHEVQQCLAVYQDMWKAG 651
++ + LA + +M G
Sbjct: 395 ADQLDKSLAFFSEMLDKG 412
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 24/386 (6%)
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+++L+N A D + + M+K G++ A YN ++K C G A Y +++
Sbjct: 36 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
A V+ TY+ +V + A + EDM+ AG PN +T+++LIN
Sbjct: 96 RHCAPSVI-----TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +++A+ LF +ML+ C P+ NIL+ + + +L +
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV----------K 200
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DY 529
Y + I+ D S+ + ++ + + R KP+ T+N+++ C
Sbjct: 201 YGCEPNFITYNTLMD--SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 258
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M G P+ ++ I+I + ++ A Q+L+ M E G PDVV Y +
Sbjct: 259 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 318
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ ++ ++ +A+ ++E +++ ++VT TL+ + L + ++ L ++M +
Sbjct: 319 VSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL---REMER 375
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKN 675
G + LI +C+ DK+
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKS 401
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 143/350 (40%), Gaps = 26/350 (7%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D +Y+ L+ C A + Q+ Y + +E +G++ + Y+TI+K D A
Sbjct: 32 DSITYSTLINGFCKARDF---QQAYRLLDEMEKRGIVPHNA-VYNTIIKGLCDNGRVDSA 87
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L DM P+ IT++ L++A + + A + E+M++AGC PN N L+
Sbjct: 88 LVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A LF + + Y+ D E P
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFT-YNILIDGYCKQER-------------PQDGA 192
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+ ++ +P TYN LM + + A L M P+H ++ ++ID
Sbjct: 193 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 252
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A ++ ++M + G PD+ Y I R+ R+ A L E M P++
Sbjct: 253 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
VTY +++ + + E + VY+ + GY + LI+ C+
Sbjct: 313 VTYNSIVSGLCKASQVDEAYE---VYEVLRNGGYFLDVVTCSTLIDGLCK 359
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ F K Q A + ++ L +P++IT+S+LIN A +QA L +EM +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ N +++ + + D A +R
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYR----------------------------- 92
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
D + P+ TY IL+ A C A ++ +M G
Sbjct: 93 -------------------DMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGC 133
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LI+ GN++ A+ + M E+ SPDV Y I + +R +
Sbjct: 134 APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 193
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYG 632
L +EM Y +PN +TY TL+ + + G
Sbjct: 194 LLQEMVKYGCEPNFITYNTLMDSLVKSG 221
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + TY+ L+ C D+ + L++EM G+ P++ + +I +G V+ AL
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+ +P V+ YT + +S R+ A + E+M PN+VTY TL+ +
Sbjct: 91 YRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
G++ E + ++ M + + LI+ +C+ Q++ Q+ ++
Sbjct: 150 LGNMDEA---VVLFNQMLENSCSPDVFTYNILIDGYCK---QERPQDGAKL 194
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ + +ID+ G + +++ + + +IY +N +++ A+ + ++
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G D+ +YN ++ C A A E+Y +++ G LDV T ST++
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN----GGYFLDVVTCSTLID 355
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A K+ +M G P+ + ++ LI+ A +++++ F EML GC P
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + E + ++ +NS+++ A + EVY+ ++ G D+ + + L+
Sbjct: 296 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C + A+++ ++ +E G DV Y+ ++ F A +L +ML
Sbjct: 356 GLCKSRRLDDAEKL---LREMERNGSAP-DVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
G P IT+S +I+ + V L + ML+ G
Sbjct: 412 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
>gi|449457967|ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 189/409 (46%), Gaps = 51/409 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G L +A++ Y K + PN++I T+ID+ I G + +Y
Sbjct: 518 LLICS-CKELGH---LENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLS 573
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LRS + L++ +N ++ + K G + D AC +
Sbjct: 574 LRSSGIPLDLIAYNVVVRMYV--------------KAGSLED---------ACSVLDLMA 610
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
Q+I ++ L L ++ +V AD + +L +GV+ + +
Sbjct: 611 EQQDIVPDIYLLRDM----LRIYQRCGMVHKLADLYY---------RILKSGVSWDQEMY 657
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN C+ A V++ LF+EMLQ G PN+ N++L ++ F +A LF L
Sbjct: 658 NCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF---GL 714
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
++ + L + NT ++KD +++++T V ++ F S + +
Sbjct: 715 AQKR-GLVDAISYNTMISVYGKNKDFKNMSST---VQKMKFNGFS--VSLEAYNCMLDAY 768
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
K C + +R +++ M+ +H ++ I+I+ G G ++ ++L ++ G+ P
Sbjct: 769 GKECQMENFR--SVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEP 826
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
D+ +Y T IK + +++A L +EM+ +I+P+ +TYI ++RA R
Sbjct: 827 DLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQR 875
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 62/323 (19%)
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLIN 406
G + + + G LK +V Y+ +++V + W A K+ E++ + G + +++LI
Sbjct: 149 GFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIY 208
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR---AFRLFRSWTLSK 463
AC + VEQ F ML+ +PN +L+ + C AF R++ +
Sbjct: 209 ACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGI-- 266
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY---NI 520
V + Y+S T Y N+
Sbjct: 267 ---------------------------------VCETAYASM---------ITIYIRMNL 284
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA V LM E + + PN +W ++++A G +E A + M E G S
Sbjct: 285 YDKA-----EEVIQLMQEDKVI---PNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFS 336
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+++AY T I ++ + A LF +K+ ++P+ TY +++ R G+ +
Sbjct: 337 SNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEW- 395
Query: 641 LAVYQDMWKAGYKANDTYLKELI 663
Y+++ + GY N + L LI
Sbjct: 396 --YYKELKRRGYMPNSSNLFTLI 416
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 146/394 (37%), Gaps = 102/394 (25%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ +M++ G +++ +YN L+ A N AQ ++ +K+ GV + D TY +++
Sbjct: 326 VFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKN---SGV-EPDETTYRSMI 381
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A ++MA +++ G PN+ +LIN A + +ML+ GC
Sbjct: 382 EGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCR 441
Query: 431 PNS----------------------------------QCCNILLQACVEACQFDRAFRLF 456
P+S C+IL+ A V+ C D A ++
Sbjct: 442 PSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVL 501
Query: 457 R--SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R W + L + + ++E+ K Y+ KR + KP
Sbjct: 502 REKEWKDHHFEENLYHLLICSCKELGHLENAIKI-------------YTQLPKREN-KP- 546
Query: 515 TTTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGA 567
N+ + D Y + ++ +R+ G+ + I++ +++ +G++E A
Sbjct: 547 ----NLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDA 602
Query: 568 LQILKIMRED------------------------------------GMSPDVVAYTTAIK 591
+L +M E G+S D Y I
Sbjct: 603 CSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVIN 662
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
C R+ + + LF+EM PN VT +L
Sbjct: 663 CCSRALPVDELSRLFDEMLQCGFAPNTVTLNVML 696
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV + MQ+ V+ ++ ++ ++L A C G A+ ++ +E G ++ Y+T+
Sbjct: 290 EVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFAS---MEEAG-FSSNIIAYNTL 345
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A ++ + ++GV P+ T+ S+I AG + A ++E+ + G
Sbjct: 346 ITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGY 405
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDK 487
PNS N+ ++A D A L KT + + + + N+ ++
Sbjct: 406 MPNSS--NLFTLINLQAKHEDEAGTL-------KTLNDMLKIGCRPSSIVGNVLQAYEKA 456
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM---KACCTDYYRVKALMNEMRTVGL 544
+ + + P + S Y R T+ ++M K C D + +R
Sbjct: 457 RRMKSVPVLLTGSFY-----RKVLSSQTSCSILVMAYVKHCLVD-----DALKVLREKEW 506
Query: 545 SPNHIS---WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+H + +LI +C G++E A++I + + P++ T I + R
Sbjct: 507 KDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSD 566
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE---VQQCLAVYQDM 647
L+ ++ I +L+ Y ++R + GSL + V +A QD+
Sbjct: 567 GEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDI 615
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 518 YNILMKACCTDYYRVKAL---MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN ++ CC+ V L +EM G +PN ++ +++D G S A + +
Sbjct: 657 YNCVIN-CCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 715
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ G+ D ++Y T I V ++K K S ++MK +L Y +L A YG
Sbjct: 716 QKRGL-VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDA---YGKE 771
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQ 693
+++ +V Q M + + + +I + E G I + + E+ C
Sbjct: 772 CQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSY 831
Query: 694 SLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKEN 738
+ L++ + A L ++R RI + ++R ++ N
Sbjct: 832 NTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRN 876
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 167/399 (41%), Gaps = 59/399 (14%)
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F++L+N + K +E++ M G ++ SY+I++K C G T E+
Sbjct: 160 NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTT---EVI 216
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++H++ G + DV Y+TIV + A+ + M G+ P +T++SLI+
Sbjct: 217 KLLEHMKVVGC-EPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
N G ++A L EM P+ ++L+ + + A + ++ T
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT------- 328
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+P TYN LM C
Sbjct: 329 ----------------------------------------EMGVEPDVATYNTLMNGYCL 348
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
V+A + M + G P+ S++IL++ + ++ A Q+ M G+ PD V+
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T I +++R +A LF++M PNLVTY LL S+ G L Q + +++
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYL---DQAMGLFR 465
Query: 646 DMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTL 683
M +G K + +I+ C+ G +D + E+++
Sbjct: 466 AMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSV 504
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 53/342 (15%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ DV + + ++ F V ++ G+ PN IT+S+LIN
Sbjct: 115 KQMEMAGI-SHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCI 173
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A+ LF+ M+ G +PN +I+++ + +L + + +
Sbjct: 174 EGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDV-V 232
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
Y+ DR+ K + N H K PT TY L+
Sbjct: 233 IYNTIVDRLC------KDRLVNEA-----VHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L+NEM+ + P+ +++++LID G V A ILK M E G+ PDV Y T
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341
Query: 589 AIK-VCVR----------------------------------SKRLKQAFSLFEEMKHYQ 613
+ C+R +KR+ +A LF+EM H
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ P+ V+Y TL+ + E ++ +++DM GY N
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEE---LFKDMHSNGYPPN 440
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL---- 309
P++ +ID+ G+ ++R I + + V ++ +N+LMN + L+ +
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMN--GYCLRMEVVEAR 356
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V++ M G M D+ S++IL+ C A A++++ E+ H +G++ D +Y+T+
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH---RGLIP-DTVSYNTL 412
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ A ++ +DM S G PN +T+S L++ + G ++QAM LF M +G
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+P+ NI++ + +F A LF ++ Q
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 119/308 (38%), Gaps = 54/308 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ + + K ++ + + + M AG++ + ++ + LIN V+ +
Sbjct: 91 IVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLG 150
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EPN + L+ C+E + RA LF VA G
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEG-KIGRAIELF------DVMVARG------------ 191
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
+KP +Y+I++K C V L+ M
Sbjct: 192 -----------------------------YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM 222
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ VG P+ + + ++D V A+ I M+ G+ P VV YT+ I R
Sbjct: 223 KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRW 282
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
K+AF L EMK I P+LV + L+ + G EV + + + M + G + +
Sbjct: 283 KEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEG---EVSEARVILKTMTEMGVEPDVATY 339
Query: 660 KELIEEWC 667
L+ +C
Sbjct: 340 NTLMNGYC 347
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 92/189 (48%), Gaps = 6/189 (3%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
+ +++R ++E + S+ +++ F+ L+N A + +++ M G++ D SYN
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYN 410
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ C A + A+E++ K + + G ++ TYS ++ + + A+ +
Sbjct: 411 TLISGLCQARRPLEAEELF---KDMHSNG-YPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M ++G+ P+ +T++ +I+ G + A LF E+ G +PN+ C + +
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526
Query: 449 FDRAFRLFR 457
D A + FR
Sbjct: 527 LDEAHKAFR 535
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++K+M G ++ +Y+ILL CL+ L Q + G + +E G LK D+ TY+ +
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLD--CLSKQGYLDQAM-GLFRAMENSG-LKPDLVTYNIM 482
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ A ++ ++ G+ PN + I+ GL+++A F +M + C
Sbjct: 483 IDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDC 542
Query: 430 EPNSQCCN 437
P C N
Sbjct: 543 SPAQGCIN 550
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y V +L +M G+S + +S TILI+ +V+ +L + + G+ P+V+ ++T
Sbjct: 107 YKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFST 166
Query: 589 AIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I C+ K + +A LF+ M +PN+ +Y +++ R G EV + L + M
Sbjct: 167 LINGFCIEGK-IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL---EHM 222
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCR 685
G + + +++ C +D+ N+ C+
Sbjct: 223 KVVGCEPDVVIYNTIVDRLC----KDRLVNEAVHIFCK 256
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 174/399 (43%), Gaps = 35/399 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGV--MA 322
G+C GD + +Y D+ + L++ V+NSL+ ++ T E +K G +
Sbjct: 308 GLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK-GFCEVGRTGEAWKFWDSTGFSGIR 366
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ +YNI+ K +G A E+ +K LE D T+ T++ + + A
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATEL---LKQLENDASCSPDKVTFGTLIHGLCENGYANRA 423
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ ED ++G + ++SS+IN G A +++ M++ GC+PNS N L+
Sbjct: 424 FEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALING 483
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSITN---TPNFVP 498
+ + A +++ T S Y+ D + E +++ S+T F P
Sbjct: 484 FCRVSKINDAIKIYIEMT-SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542
Query: 499 N-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ Y+S DK+ + +NIL+ C+ +A +
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIY 602
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ SPN +++ L+D G+++ A + + ++G+ PD+V Y T IK
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
R + L E+ I P ++T+ L+RA +YG +
Sbjct: 663 NRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 56/335 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-----VNAHDL 305
SP+ T+I G+C + +RA I ED R+ L+++ ++S++N HD
Sbjct: 401 SPDKVTFGTLIH--GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
EVYKNM K G + YN L+ C A +IY E + + G + T
Sbjct: 459 N---EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE---MTSNGCCPT-IIT 511
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A+ +Q A + ++ML G P+ T++SLI V+ A+ +++E+L
Sbjct: 512 YNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL 571
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG + + NIL+ A + D AF ++ +E K
Sbjct: 572 DAGLQVDVMVHNILIHGLCSAGKVDEAFCIY-------------------------LEMK 606
Query: 486 DKQSITN--TPNFVPNSHY--SSFDKRFS---------FKPTTTTYNILMKACCTDYYRV 532
+K N T N + + Y S DK S KP TYN +K C+
Sbjct: 607 EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTP 666
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ L+NE+ G+ P I+W+IL+ A G ++
Sbjct: 667 EGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 173/419 (41%), Gaps = 22/419 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ I+ GD ++ +++ LR + V + +++LM+ + HD L L+
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M GV AD YN LL C G A +++ + L ++ TY ++
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVW---EQLVRDPGASPNLATYKVML 271
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A +V M++ +T+T+ LI+ +G V+ A ++ +M++AG
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N L++ E + A++ + S S + T I D +
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI-------TTYNIMTKGLLDSGMV 384
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+ + + S P T+ L+ C + Y +A ++ + R G +
Sbjct: 385 SEATELL-----KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S++ +I+ G A ++ K M +DG P+ Y I R ++ A ++ E
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M P ++TY TL+ + + Q+ ++ ++M + G+K + LI C
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCK---AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLC 555
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 175/458 (38%), Gaps = 66/458 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K L +AL D + + ++ C G + K+ ++E
Sbjct: 194 VTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQ 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L R + N+ + +++ K EV+ M AD +Y IL+ C +G
Sbjct: 254 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y ++ K L LDV Y++++K F + A K + +G+ T
Sbjct: 314 DVDSAARVYSDM----VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT 369
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ + ++G+V +A L +++ A C P+ L+ E +RAF +
Sbjct: 370 -TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S ++ + Y +R K T+ N V Y + K KP +
Sbjct: 429 DARNSGEELDVFS-YSSMINRFC------KDGRTHDANEV----YKNMVKD-GCKPNSHV 476
Query: 518 YNILMKACCTDYYRVKALMN------EMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN L+ C RV + + EM + G P I++ LID + + A +
Sbjct: 477 YNALINGFC----RVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLT 532
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSK---------------------------------- 597
K M E G PD+ Y + I+ R K
Sbjct: 533 KEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSA 592
Query: 598 -RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ +AF ++ EMK PNLVTY TL+ GS+
Sbjct: 593 GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 154/377 (40%), Gaps = 31/377 (8%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ I++
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + GV P+ +T+S+L++ A ++ A+ L +EM G + ++ C N
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFR--------SWTLSKTQVALG-----EDYDGNTDRISNMEH 484
LL C F++A +++ S L+ +V L + + S M
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTT-----------TTYNILMKACCTDYYRVK 533
+ Q+ T T + + S D + + + + YN L+K C + R
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC-EVGRTG 351
Query: 534 ALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAI 590
+ G S ++ I+ SG V A ++LK + D SPD V + T I
Sbjct: 352 EAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ +AF + E+ ++ + ++ +Y +++ + G H+ + VY++M K
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE---VYKNMVKD 468
Query: 651 GYKANDTYLKELIEEWC 667
G K N LI +C
Sbjct: 469 GCKPNSHVYNALINGFC 485
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++PN ++ I++ + G+V+ A+ + +R G++PD V Y+T + + +L A
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK-AGYKANDTYLKEL 662
L +EM +Y +Q + V Y LL R G ++ + V++ + + G N K +
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMF---EKAMKVWEQLVRDPGASPNLATYKVM 270
Query: 663 IEEWCE 668
++ C+
Sbjct: 271 LDGLCK 276
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ I+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A + E+K + K+ Y+ I+ +F AL + E+M
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKI----YTMIISLFFKLDNVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H + EM + GC+P++ N ++ +A + D
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KR 508
+LF +S + NT + E K + S +S F+ K
Sbjct: 353 DGLKLFEEMGVSH---CIPNVVTYNTIIKALFESKSRVSEV----------FSWFERMKG 399
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ TY+IL+ C KA+M EM G P ++ LIDA G + +
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ + ++E+ S Y IK ++ RL A +LF+EM PN+ Y L+
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMS 519
Query: 627 ARSRYGSLHE 636
+R L E
Sbjct: 520 GLARACMLDE 529
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 53/410 (12%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R + K++ P I II + + + +++E++R +++ + L+
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELI 307
Query: 299 NV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + Y MQ+ G D N ++ AG + +K E
Sbjct: 308 RGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAG------RLDDGLKLFEEM 361
Query: 357 GVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLIN 406
GV +V TY+TI+K ++K W+ E M +G++P+ T+S LI+
Sbjct: 362 GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF-------ERMKGSGISPSPFTYSILID 414
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+E+AM L EEM + G P L+ A +A ++D A LF+
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE-------- 466
Query: 467 ALGEDYDGNTDRISN--MEHKDKQS-ITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNIL 521
L E+ ++ R+ ++H K + + N FD+ + P YN L
Sbjct: 467 -LKENCGSSSARVYAVMIKHLGKAGRLDDAINL--------FDEMSKLGCTPNVYAYNAL 517
Query: 522 M----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
M +AC D M +M+ G P+ S+ I+++ +G A+++L M+
Sbjct: 518 MSGLARACMLD--EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS 575
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ PD V+Y T + + ++A L +EM + +L+TY ++L A
Sbjct: 576 TIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
+PT YN I+M Y +V L NEM G P+ ++++ LI A G + A+
Sbjct: 191 QPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAI 250
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M+E+GM P YT I + + + A SLFEEM++ +P++ TY L+R
Sbjct: 251 RLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGL 310
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G + E Y +M + G K + + +I
Sbjct: 311 GKAGRIDEAYH---FYHEMQREGCKPDTVVMNNMI 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 131/321 (40%), Gaps = 38/321 (11%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D TY ++ + + K+ ++M+ + VTP + S +I NA ++ +A+
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVIRMLGNAKMIGKAI 179
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+++ L+ +
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELY--------------------NE 219
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD---------KRFSFKPTTTTYNILMKAC--CT 527
+SN H ++T + D K +PT Y +++
Sbjct: 220 MSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLD 279
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +L EMR + P+ ++T LI G +G ++ A M+ +G PD V
Sbjct: 280 NVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMN 339
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ RL LFEEM PN+VTY T+++A + S V + + ++ M
Sbjct: 340 NMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA--LFESKSRVSEVFSWFERM 397
Query: 648 WKAGYKANDTYLKELIEEWCE 668
+G + LI+ +C+
Sbjct: 398 KGSGISPSPFTYSILIDGFCK 418
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ+ G + D+ SYNI+L
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ +K+ +K D +Y+T++ + A ++ A ++ ++M + G
Sbjct: 558 KTGGPHRAMEMLTNMKN----STIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 614 YDLITYSSILEA 625
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 193/442 (43%), Gaps = 65/442 (14%)
Query: 228 VREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V+ + D +ALR + A K+ N T+ID+ G + + +++ + +++Q
Sbjct: 187 VKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQG 246
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADM--ASYNILLKACCLAGNTVL 342
+ + +S + +F +LE + M+++G + +YN +L + +
Sbjct: 247 REITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDM 306
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ ++ ++ + GV + TY+++++ F + + A+K+ +DM+ P+ +T++
Sbjct: 307 AENLFAQMIN---NGV-SCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYT 362
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I+A ++EQA + ++M + GCEPN N L+Q + + A L
Sbjct: 363 IVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL------- 415
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ ME VP P TY IL
Sbjct: 416 ----------------VTLMEQGG----------VP--------------PNIYTYTILT 435
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGM 579
C R K + NE GL PN +++ L++ C GS +E A+ ILK M ++
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE-AMDILKEMHQNDC 494
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PD V YTT I+ V+ +L A + +EM++ N T L R +R G+ +
Sbjct: 495 TPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDAS- 553
Query: 640 CLAVYQDMWKAG--YKANDTYL 659
Y+ M G Y A+D YL
Sbjct: 554 --IFYRRMKDRGFAYSASDYYL 573
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 36/307 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M++ G ++ +YN L++ C V E E+ L +G + +++TY+ +
Sbjct: 380 VLQKMRENGCEPNIYTYNALIQGLC----AVRRPEEALELVTLMEQGGVPPNIYTYTILT 435
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+ A ++ + L+ G+ PN +T+++L+N C + L+E AM + +EM Q C
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE-AMDILKEMHQNDC 494
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD----------RI 479
P+ L+Q V+ Q A R+ + YD N D R+
Sbjct: 495 TPDHVTYTTLIQGLVQGNQLPDALRMHDEME--------NKGYDVNFDTLNILARGLARV 546
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
N HKD + D+ F++ + I + + +AL+ EM
Sbjct: 547 GN--HKDASIF----------YRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEM 594
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G SPN ++ +I G ++ A +L M E+G+ PD +Y IK R
Sbjct: 595 INKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRT 654
Query: 600 KQAFSLF 606
+ A L+
Sbjct: 655 QDADQLY 661
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+++M +P+ +++TI+I A +E A +L+ MRE+G P++ Y I+
Sbjct: 345 LLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLC 404
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+R ++A L M+ + PN+ TY L + L + + ++ + G K
Sbjct: 405 AVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCK---LRRLDRAKEMFNEALARGLKP 461
Query: 655 NDTYLKELIEEWCEG 669
N L+ +C G
Sbjct: 462 NRVTYNTLLNGYCRG 476
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 506 DKRFSFKPTTTTY----NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
DK+ + T Y +IL +A + +++L+ +M+T G + + G S
Sbjct: 207 DKQEGYDHNTDAYFTMIDILGRA--KMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRS 264
Query: 562 GNVEGALQILKIMREDGMSPDVV--AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + +L+ +M+E G P ++ AY + + V++K+L A +LF +M + + N +
Sbjct: 265 GRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNL 324
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE--------GVI 671
TY ++++ + +++ + + DM + Y + +I C+ GV+
Sbjct: 325 TYTSMIQC---FFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVL 381
Query: 672 QDKNQNQGEVTL 683
Q +N E +
Sbjct: 382 QKMRENGCEPNI 393
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 201/477 (42%), Gaps = 38/477 (7%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N V KK ++ SA + KK +P++++ +I+ G ++ +++ ++ +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ L L M ++G+ A + Y+ L+ C G A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ E + A G LK +V Y++++ + A ++ +M G++PNT T+++
Sbjct: 445 KSLFDE---MIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ +A + +A LF EM++ PN N+L++ + RAF L + K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE-MVEK 559
Query: 464 TQVALGEDYDG------NTDRISNMEH-----KDKQSITNTPNFVPNSHYSSFDKRF--- 509
V Y +T R+S + +Q N F H + R
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619
Query: 510 ----------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
Y++L+ D + L+ +M GL P+++ +T +IDA
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A + IM +G P+VV YT I + + +A L EM PN
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
TY L + G++ + Q D+ G+ AN LI +C+ G IQ+
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQ----LHDVLLEGFLANTVTYNILIRGFCKLGRIQE 792
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 163/379 (43%), Gaps = 46/379 (12%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S ++ + ++MAL + ++++S+G+ P+ +++++ + +A + M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 425 LQAGCEPNSQCCNILL------QACVEACQFDR--AFRLFRSWTLSKTQVALG----EDY 472
+GC+ + N+ + Q EA + +++ R+ + + LG E++
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 473 DGNTDRISNM-EHKDKQSITNTPNFVPNSHY-----SSFD-----KRFSFKPTTTTYNIL 521
+ + ++ M E S N V S+FD K+F P+ YN L
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C D ++L N M GL PN ++++ILID+ G ++ AL L M E G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V Y++ I + +L+ A SLF+EM ++PN+V Y +L+ + G LH
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA-- 479
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE-----------GVIQDKNQNQGEVTL----- 683
+Y +M G N LI C G + + N EVT
Sbjct: 480 -FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 684 --CRRTNSQRPQSLLLEKV 700
C+ N+ R LL E V
Sbjct: 539 GHCKEGNTVRAFELLDEMV 557
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 131/606 (21%), Positives = 237/606 (39%), Gaps = 85/606 (14%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + + KDG+L+E ES+ + G+ F + ++ ++ K G++D +
Sbjct: 358 YNALINSMCKDGKLDE----AESLFNNMGHKGLFPNDVTYSILIDSFCK---RGKLDVAL 410
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
L K+ E+G+ S L+ C+ L + R K L +
Sbjct: 411 HFLGKMTEVGIKATVYPYSS---LISGHCK-----------------LGKLR-AAKSLFD 449
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
E L KP+V +++ + + + K+ +L +A R Y S
Sbjct: 450 EMIANGL---KPNV--------------VIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN Y +I G+C + A ++ ++ NV N +N L+ + +
Sbjct: 493 PNTYTFTALIS--GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M + G++ D +Y L+ C G A+E +++ + K L+ +S +
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK----LNEMCFSAL 606
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL +ML GV + + +S LI + L ++M G
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL 666
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGNTDRISNMEHKDK 487
P++ ++ A +A AF L W + ++ L Y + + + DK
Sbjct: 667 RPDNVLYTTMIDANAKAGNLKMAFGL---WDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV-----KAL-MNEMRT 541
+ NS P TY AC DY KA+ ++++
Sbjct: 724 AELLCREMLASNS-----------LPNQNTY-----ACFLDYLTSEGNIEKAIQLHDVLL 767
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G N +++ ILI G ++ A ++L M + G+SPD ++Y+T I R LK+
Sbjct: 768 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 827
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L+E M + + P+ V Y L+ G E+ + + DM + G K N
Sbjct: 828 AIKLWESMLNRGVNPDTVAYNFLIYGCCVTG---ELTKAFELRDDMMRRGVKPNRATYNS 884
Query: 662 LIEEWC 667
LI C
Sbjct: 885 LIHGTC 890
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 164/410 (40%), Gaps = 53/410 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ ++K GV + YN L+ + C G A+ ++ + H KG+ DV TYS
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH---KGLFPNDV-TYSI 395
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F +AL M G+ +SSLI+ G + A LF+EM+ G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN----TDRISNMEH 484
+PN L+ + + AFRL+ T G+ N T IS + H
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMT--------GKGISPNTYTFTALISGLCH 507
Query: 485 KDKQSITNTP-------NFVPN---------SHYSSFDKRFSFK-----------PTTTT 517
++ + N N +PN H + +F+ P T T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ C+ + MN+++ N + ++ L+ G ++ AL + M
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G++ D+V Y+ I +R + + L ++M ++P+ V Y T++ A ++ G+L
Sbjct: 628 GRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL- 686
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCR 685
+ ++ M G N LI C+ + DK + LCR
Sbjct: 687 --KMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE-----LLCR 729
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 165/405 (40%), Gaps = 45/405 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ S + ++YV+ +++ D EV M+ G +A+YN+ ++ C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N + + + E+K+L + L+ DV TY T+V + ++ ++ +M+ G
Sbjct: 262 --KNQRVWEAV--EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ S+L++ G + A L ++ + G P+ N L+ + + + D A L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
F +NM HK T + + +S H+
Sbjct: 378 F-----------------------NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K T Y+ L+ C K+L +EM GL PN + +T LI G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A ++ M G+SP+ +T I + R+ +A LF EM + + PN VTY
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ + G+ + + +M + G + + LI C
Sbjct: 535 VLIEGHCKEGN---TVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 24/324 (7%)
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
NVNA L+ T V M++ G + Y+ K L + + ++ G ++ + G
Sbjct: 136 NVNAGRLEDTWSVINEMKQKGFQLNSFVYS---KVIGLYRDNGMWKKAIGIIEEIREMG- 191
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD Y++I+ F AL+V +M G+TP+ +TW+SLI AG + +A+
Sbjct: 192 MPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKAL 251
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFD---RAFRLFRSWTLSKTQV--ALGEDYD 473
LF +M G P+ + ++ E +++ F + +SW K+ A+ D
Sbjct: 252 ELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIY 311
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
G R + E + S + +P++ F Y + C +V
Sbjct: 312 GQYGRFQDAE--ECISALKSEGILPSASM--------FCVLANAYA--QQGLCEQTVKVL 359
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LM G+ PN I +LI+A G +G AL I M+E G+SPDVV Y+T +K
Sbjct: 360 QLM---EAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAY 416
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPN 617
+R+++ + ++ EM+ P+
Sbjct: 417 IRARKFDEVPEIYSEMESSGCTPD 440
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 186/402 (46%), Gaps = 31/402 (7%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y C +I+ G +++ A+Y+++ + + ++N ++ + L+ V +
Sbjct: 59 YTC--LIETLLSVGRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRI 116
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+ LG+ + +Y ILL AG ++ + + ++ KG +L+ F YS ++ ++
Sbjct: 117 LDDLGLHRNQETYEILLDYNVNAGRL---EDTWSVINEMKQKG-FQLNSFVYSKVIGLYR 172
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D W+ A+ + E++ G+ + ++S+I+ G +++A+ + M Q G P+
Sbjct: 173 DNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIV 232
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQV-ALGEDYDGNTDRISNMEHKDKQSITNT 493
N L++ +A +A LF SK Q L D IS + + K +I
Sbjct: 233 TWNSLIRWHCKAGNLSKALELF-----SKMQAQGLYPDPKILVTIISRLAEQGKWNIIR- 286
Query: 494 PNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHI 549
+FD K + +K + Y IL+ + + ++ +++ G+ P+
Sbjct: 287 ---------ENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSAS 337
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ +L +A G E +++L++M +G+ P+++ I + R ++A S++ M
Sbjct: 338 MFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHM 397
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K I P++VTY TL++A R EV + +Y +M +G
Sbjct: 398 KESGISPDVVTYSTLMKAYIRARKFDEVPE---IYSEMESSG 436
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
Query: 167 DSGEVEMFVGLMEVLEEFRLPVK---------------ELDEEFRIVQLCVNKPDVNLAI 211
D+G + +G++E + E +P+ ELDE ++ +
Sbjct: 173 DNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLS----------NM 222
Query: 212 RYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ I P DI+ N +R K +L AL + + P+ I TII G
Sbjct: 223 QQQGITP--DIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQG 280
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+ R ++ ++S + ++ L+++ +F E ++ G++ + +
Sbjct: 281 KWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFC 340
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+L A G L ++ ++ +EA+G+ + ++ + ++ F A + AL +
Sbjct: 341 VLANAYAQQG---LCEQTVKVLQLMEAEGI-EPNLIMLNVLINAFGIAGRHREALSIYHH 396
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M +G++P+ +T+S+L+ A A ++ ++ EM +GC P+ + IL A + +
Sbjct: 397 MKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDKKAREILQAALMVLGR 456
Query: 449 FDRAFRLF 456
+ F++F
Sbjct: 457 RNCKFQIF 464
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C G+V+ A+ +L M+ G P ++YT I+ + R +A +L++EM + ++P
Sbjct: 31 CCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEMMCFGLKPR 90
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L Y +LR + G L ++ L + D+
Sbjct: 91 LKLYNIMLRGFLKKGLLRVAERVLRILDDL 120
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M++ GV AD +YN L+ C +G A + ++ + + ++ +V T++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL---MRDMVMRDIVP-NVITFTA 249
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF + A+K+ E+M V P+ T++SLIN G V++A + + M+ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ ++ + D +LFR Q L D I +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFR----EMAQRGLVGDTITYNTIIQGYFQAGR- 364
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
P++ F R +P TY+IL+ C ++ KAL+ M+ +
Sbjct: 365 ---------PDAAQEIF-SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+I GNVE A + + + G+ PDVV+YTT I R ++ ++ L+
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 607 EEMKHYQIQP 616
+M+ + P
Sbjct: 475 RKMQEDGLLP 484
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+E G+ D+++Y+ ++ + +AL V M+ G P+ +T SSLIN
Sbjct: 94 HMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 152
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSK 463
V A+ L +M + G P+ N ++ + + A LF R+ ++
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ G G R S+ + + + VPN +F T ++ +K
Sbjct: 213 NSLVAGLCCSG---RWSDAARLMRDMVMR--DIVPNV--------ITF---TAVIDVFVK 256
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L EM + P+ ++ LI+ G V+ A Q+L +M G PDV
Sbjct: 257 E--GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T I +SKR+ + LF EM + + +TY T+++ + G Q+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN+ +IDV G + ++ +YE++ + V +++ +NSL +N + ++ K
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL--INGLCMHGRVDEAK 299
Query: 314 NMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M L G + D+ +YN L+ C + +++ E+ G D TY+TI
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTI 355
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A A ++ M S PN T+S L+ VE+A+ LFE M ++
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRS 458
E + NI++ + + A+ LFRS
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 6/172 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+F ++P T + L+ C A L+++M +G P+ + + +ID G V
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M DG+ D V Y + + S R A L +M I PN++T+ ++
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+ G E + +Y++M + + LI C G + + Q
Sbjct: 252 DVFVKEGKFSEA---MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 183/445 (41%), Gaps = 68/445 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY---EDLRS-QNV 287
G+ D +S L + + P++ + I+D G+C +A+ E +RS
Sbjct: 186 GRVGDALSVLDGMSGPESDVC-PDVVMLNNIVD--GLCKTGRLQQAVKFVEERMRSVHGC 242
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +N L + A ++ E+ M+K V + + N ++ C G A E
Sbjct: 243 APNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALE 302
Query: 346 IYGEVKHL--EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E + + EA+G + TYST+V F +A+++ +M+ G +P+ I + +
Sbjct: 303 FFREKRTVWPEARG----NAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I+ AG ++ A + M +AG + +++ NIL+ F R RL ++ L
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGG------FCRRKRLNEAYEL-- 410
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
LGE K +P TYN L+
Sbjct: 411 ----LGEM-----------------------------------KEAGLQPDVYTYNTLLS 431
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D+ V L+ +M G P+ +++ LI G ++ AL+I + M E G+ P
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQP 491
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ V Y T I +S+ A LF+EM+ + N+ T+ LL+ + + +
Sbjct: 492 NTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551
Query: 642 AVYQDMWKAGYKANDTYLKELIEEW 666
D+ + G D +++ EW
Sbjct: 552 ----DLMREGRCTPDYVTIDILMEW 572
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 160/398 (40%), Gaps = 52/398 (13%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + + L + + FN+L++ A DL +++ +M+ V ++ +Y IL+K
Sbjct: 121 ARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVK 180
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLS 391
C AG A + + E+ + DV + IV Q A+K V+E M S
Sbjct: 181 GLCKAGRVGDALSVLDGMSGPESD--VCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238
Query: 392 A-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G PNT+T++ L +A AG V A L +M + PN+ N ++ +
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A FR + + + GN ++T YS+ F
Sbjct: 299 AALEFFRE------KRTVWPEARGN-------------AVT----------YSTLVGAFL 329
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T + M+ L +EM G SP+ I + +I +G ++ A +
Sbjct: 330 H---TNNVGVAME-----------LFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSM 375
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M++ G D AY I R KRL +A+ L EMK +QP++ TY TLL +
Sbjct: 376 ATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCK 435
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G V + L M G + + LI +C+
Sbjct: 436 AGDFLAVDELLG---KMIDGGCRPSVVTFGTLIHGYCK 470
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y IL ++ + + L + + P+ ++ L+DA +G++ G Q+ MR+
Sbjct: 107 YKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDA 166
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYITLLRARSRYGSLH 635
+ P+VV Y +K ++ R+ A S+ + M + + P++V ++ + G L
Sbjct: 167 SVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQ 226
Query: 636 E 636
+
Sbjct: 227 Q 227
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 168/393 (42%), Gaps = 26/393 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
II + G K+ AI+ ++++ + +NS++ + H+ ++ E+Y M G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220
Query: 320 -VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D +Y+ L+ A C G A + E+K + K+ Y+ ++ +
Sbjct: 221 QCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKI----YTMLMALLFKLDN 276
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + E+M P+ T++ LI AG +++A + F EM + GC P++ N
Sbjct: 277 VHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNN 336
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A + D A +LF +T + NT + E K + S
Sbjct: 337 MINFLGKAGRLDDAIKLFEEM---ETLRCIPSVVTYNTIIKALFESKSRVS--------- 384
Query: 499 NSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTI 553
SS+ +R P+ TY+IL+ C KA+M EM G P ++
Sbjct: 385 --EISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA G + + A ++ + ++E+ S Y IK ++ RL A LF+EM
Sbjct: 443 LIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLG 502
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
PN+ Y L+ +R G L E + QD
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQD 535
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 197/486 (40%), Gaps = 49/486 (10%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V++ E ++++Q V P C+V ++ + +R G + + A+ +
Sbjct: 132 VEQYGEMWKMIQEMVRNP--------VCVVTPMEL--SDIIRMLGNAKMISKAVAIFYQI 181
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL-NIYVFNSLMN----VNA 302
K P + ++I + G+Y K +Y ++ ++ + +++L++ +
Sbjct: 182 KARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGR 241
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D L M+ G+ Y +L+ N A ++ E++H + D
Sbjct: 242 QDSAIWL--LNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRH----QYCRPD 295
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VFTY+ +++ A A +M G P+T+ +++IN AG ++ A+ LFE
Sbjct: 296 VFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFE 355
Query: 423 EMLQAGCEPNSQCCNILLQACVEA----CQFDRAFRLFRSWTLSKTQVALGEDYDG--NT 476
EM C P+ N +++A E+ + F + +S + DG T
Sbjct: 356 EMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKT 415
Query: 477 DRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
+R +E D++ P S + K + + L + C + RV
Sbjct: 416 NRTEKAMMLLEEMDEKGFPPCPA-AYCSLIDALGKAKRYDLANELFQELKENCGSSSARV 474
Query: 533 KALM-----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
A+M +EM +G +PN ++ L+ +G ++ AL ++ M+
Sbjct: 475 YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G PD+ +Y + ++ +A + MK I+P+ V+Y T+L A S G
Sbjct: 535 DHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFE 594
Query: 636 EVQQCL 641
E + +
Sbjct: 595 EAAKLM 600
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 39/365 (10%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++E++R Q +++ + L+ A L + M++ G D N ++
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL 341
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVK 386
AG A +++ E++ L V TY+TI+K ++K W+
Sbjct: 342 GKAGRLDDAIKLFEEMETLRCIP----SVVTYNTIIKALFESKSRVSEISSWF------- 390
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E M +G++P+ T+S LI+ E+AM L EEM + G P L+ A +A
Sbjct: 391 ERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++D A LF+ L E+ ++ R+ + K + V FD
Sbjct: 451 KRYDLANELFQE---------LKENCGSSSARVYAVMIKHLGKAGRLDDAV-----DLFD 496
Query: 507 K--RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
+ R P YN LM +AL M M+ G P+ S+ I+++A +G
Sbjct: 497 EMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A+ +L M++ + PD V+Y T + + ++A L +EM +L+TY
Sbjct: 557 GPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYS 616
Query: 623 TLLRA 627
++L A
Sbjct: 617 SILEA 621
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLS-PNHISWTILIDACGGSGNVEGAL 568
+PT YN I+M +Y +V L NEM G P+ ++++ LI A G + A+
Sbjct: 187 QPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAI 246
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L M+++GM P YT + + + + A LFEEM+H +P++ TY L+R
Sbjct: 247 WLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGL 306
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ G L E + +M + G + + + +I
Sbjct: 307 GKAGRLDEAYN---FFHEMRREGCRPDTVLMNNMI 338
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 130/312 (41%), Gaps = 20/312 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV---TPNTITWSSLINACANAGLVEQAM 418
D TY +++ + + K+ ++M+ V TP + S +I NA ++ +A+
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTP--MELSDIIRMLGNAKMISKAV 175
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P + N ++ + ++++ L+ + Y
Sbjct: 176 AIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISA 235
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALM 536
+ +D + ++ N K +PT Y +LM + + L
Sbjct: 236 FCKLGRQD------SAIWLLNEM-----KDNGMQPTAKIYTMLMALLFKLDNVHGALGLF 284
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR P+ ++T LI G +G ++ A MR +G PD V I ++
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA 344
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
RL A LFEEM+ + P++VTY T+++A + S V + + ++ M +G +
Sbjct: 345 GRLDDAIKLFEEMETLRCIPSVVTYNTIIKA--LFESKSRVSEISSWFERMKGSGISPSP 402
Query: 657 TYLKELIEEWCE 668
LI+ +C+
Sbjct: 403 FTYSILIDGFCK 414
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVD 493
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ G + D+ SYNI+L A
Sbjct: 494 LFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALA 553
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + +K + +K D +Y+T++ + A ++ A K+ ++M + G
Sbjct: 554 KTGGPDRAMGMLCNMK----QSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFD 609
Query: 396 PNTITWSSLINACANAGLVEQ 416
+ IT+SS++ A G V+Q
Sbjct: 610 YDLITYSSILEAI---GKVDQ 627
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 173/392 (44%), Gaps = 42/392 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ K++ ++ ++ + N + L+N K E
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ MQ+ GV ++ +YN ++ C G T A +++ E++ +GV ++ TY+T++
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE---RGV-SCNIVTYNTLI 310
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A KV + M S G+ PN IT+++LI+ G + +A+ L ++ G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ NIL+ A ++ R SK + D +D NME
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD---NMEKA 427
Query: 486 DKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE------ 538
+ ++ VP+ H TY++L+ C +K MNE
Sbjct: 428 IQLRLSMEELGLVPDVH---------------TYSVLIHGFC-----IKGQMNEASRLFK 467
Query: 539 -MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M PN + + +I G+ AL++LK M E ++P+V +Y I+V + +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K+A L E+M I P+ + RA++
Sbjct: 528 KSKEAERLVEKMIDSGIDPSTSILSLISRAKN 559
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 31/390 (7%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F L+ A +++ + ++ + + G ++ Y L+ CC G A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ L L + TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEMGKLG----LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTL 461
+N G + A +F+EM + G N N L+ + + A ++ +S +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYNIL
Sbjct: 335 NPNLITYNTLIDGFCGV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNIL 379
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ +++TILID S N+E A+Q+ M E G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV Y+ I C++ ++ +A LF+ M +PN V Y T++ + GS +
Sbjct: 440 VPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY--- 495
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + ++M + N + +IE C+
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +IN+ + + ++ F EM+ G P S C N LL V + F++ + F
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
+K++V L + Y E + + SFD F F P
Sbjct: 155 -NKSKVVL-DVYSFGILIKGCCEAGEIEK--------------SFDLLIELTEFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM +GL N ++T+LI+ +G + ++ +
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+EDG+ P++ Y + + R K AF +F+EM+ + N+VTY TL+ R
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+E + V M G N LI+ +C
Sbjct: 319 LNEANK---VVDQMKSDGINPNLITYNTLIDGFC 349
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ +D A + +D ++ S N+ T+I G+C + + A + + ++S +
Sbjct: 282 GRTKD---AFQVFDEMRERGVSCNIVTYNTLIG--GLCREMKLNEANKVVDQMKSDGINP 336
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N+L++ L L + ++++ G+ + +YNIL+ C G+T A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM- 395
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
VK +E +G+ K TY+ ++ FA + + A++++ M G+ P+ T+S LI+
Sbjct: 396 --VKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCN-ILLQACVEACQFDRAFRLFR 457
G + +A LF+ M++ CEPN N ++L C E + RA +L +
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY-RALKLLK 502
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 49/281 (17%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A LF EM + G N + +L+ + + F ++ + ED
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK---------MQED-- 262
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
P TYN +M C D
Sbjct: 263 ------------------------------------GVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 534 AL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A +EMR G+S N +++ LI + A +++ M+ DG++P+++ Y T I
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+L +A SL ++K + P+LVTY L+ R G
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--MSPDVVAYTTAIK 591
+ NEM G P + L+ GS + Q E+ + DV ++ IK
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN---QWWSFFNENKSKVVLDVYSFGILIK 171
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C + ++++F L E+ + PN+V Y TL+ + G E+++ ++ +M K G
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG---EIEKAKDLFFEMGKLG 228
Query: 652 YKANDTYLKELIEEWCEGVIQDKNQNQG 679
AN+ LI G+ ++ + QG
Sbjct: 229 LVANERTYTVLI----NGLFKNGVKKQG 252
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 179/401 (44%), Gaps = 37/401 (9%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + N Y + L+ + D VY +M + G D+ ++N+LL A
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQK 238
Query: 340 TVLAQEIYGEVK--HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A +++ ++K H E D FTY+ ++++ A +L + + ML G T N
Sbjct: 239 VDKAYKVFEDMKRRHCEP------DTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLN 292
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ---FDRAFR 454
I ++++I A A + ++A+ LF +M++ GC+PN ++LL V Q D
Sbjct: 293 LIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVE 352
Query: 455 LFRSWT-------LSKTQVALGEDYDGNTDRISNM----EHKDKQSITNTPNFVPNSH-- 501
+ + + +T LG + + NM + DK + + + +S
Sbjct: 353 MSKKYMNKQIYAYFVRTLSKLGHSSEAHR-LFCNMWNVHDKGDKDAYMSMLESLCSSGKI 411
Query: 502 YSSFD--KRFSFKPTTT---TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ D RF K TT YN + A + L +M+ G P+ ++ IL
Sbjct: 412 AEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNIL 471
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I + G +G V+ A++I + + PDV++Y + I ++ + +A F+EM+ +
Sbjct: 472 ISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 531
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
P++VTY TL+ +G +V+ +++ +M G N
Sbjct: 532 NPDVVTYSTLIEC---FGKTDKVEMACSLFDEMIAEGCSPN 569
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 42/394 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ +Y D+ +L+I+ FN L++ A D K +V+++M++ D +Y I++
Sbjct: 206 KAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMI 265
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ AG T E + + KG L++ Y+T+++ A + A+ + M+
Sbjct: 266 RMTGKAGKT---DESLALFQAMLEKG-FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVE 321
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN T+S L+N G + + ++ E + N Q ++ +
Sbjct: 322 NGCQPNEFTYSVLLNVLVAEGQLNKLDNIVE---MSKKYMNKQIYAYFVRTLSKLGHSSE 378
Query: 452 AFRLF-RSWTL-----SKTQVALGEDY--DGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A RLF W + +++ E G ++ ++ + T + N+ ++
Sbjct: 379 AHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFT 438
Query: 504 SFD---------------KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
+ K+ P TYNIL+ + Y R + E+
Sbjct: 439 ALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILI----SSYGRAGRVDSAVKIFEELENS 494
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
P+ IS+ LI+ G +G+V+ A K M+E G++PDVV Y+T I+ ++ +++ A
Sbjct: 495 NCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMA 554
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
SLF+EM PNLVTY LL R G E
Sbjct: 555 CSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAE 588
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 136/326 (41%), Gaps = 25/326 (7%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LD+F ++ ++ A + A KV EDM P+T T++ +I AG ++++ L
Sbjct: 221 LDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLAL 280
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-----------VALG 469
F+ ML+ G N N +++A + D+A LF + Q V +
Sbjct: 281 FQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVA 340
Query: 470 EDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYNI 520
E D I M K +KQ + +SS R K Y
Sbjct: 341 EGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMS 400
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++++ C+ +A L+N ++ + I + + A G V + + M++DG
Sbjct: 401 MLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDG 460
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD+ Y I R+ R+ A +FEE+++ QP++++Y +L+ + G + E
Sbjct: 461 PPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAH 520
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIE 664
+++M + G + LIE
Sbjct: 521 M---RFKEMQEKGLNPDVVTYSTLIE 543
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 174/457 (38%), Gaps = 89/457 (19%)
Query: 221 DILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
DI N + + K + + A + ++ K+ P+ + +I + G G +S A++
Sbjct: 222 DIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALF 281
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDL--------------------KFTLEVYKN----- 314
+ + + TLN+ +N+++ A +FT V N
Sbjct: 282 QAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAE 341
Query: 315 --MQKLGVMADMAS-------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ KL + +M+ Y ++ G++ A ++ + ++ KG D
Sbjct: 342 GQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKG----DKDA 397
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y ++++ + A+ + +T +TI ++++ A V L+E+M
Sbjct: 398 YMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMK 457
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
Q G P+ NIL+ + A + D A ++F S Q
Sbjct: 458 QDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQ-------------------- 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
P +YN L+ D EM+ G
Sbjct: 498 ---------------------------PDVISYNSLINCLGKNGDVDEAHMRFKEMQEKG 530
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+P+ ++++ LI+ G + VE A + M +G SP++V Y + RS R +A
Sbjct: 531 LNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAV 590
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARS-RYGSLHEVQQ 639
L+ ++K + P+ +TY L R +S R+G L +Q
Sbjct: 591 DLYAKLKQQGLTPDSITYAVLERLQSGRHGKLRVRRQ 627
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 160/367 (43%), Gaps = 38/367 (10%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL---DVFTYSTI 369
+ M +LG M D SY ILLK C N A+E E+ H+ A + +V +YS +
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLC---NEKRAEEAL-ELLHMMADDHGRRCPPNVVSYSIV 205
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +M+ G+ P+ +T++++I+ A L ++A +F++M+ G
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L+ + ++ ++ + A G D T S + + K
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMS------ARGLKPDCYTYG-SLLNYLCKNG 318
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV------- 542
F +S R KP +TY IL+ Y K ++EM +
Sbjct: 319 RCREARFFFDSMI-----RKGIKPKVSTYGILIHG-----YATKGALSEMHSFLDLMVEN 368
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GLSP+H + I A G ++ A+ I MR+ G+SP+VV Y I + R+ A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYG--SLHEVQQCLAVYQDMWKAGYKANDTYLK 660
F +M + + PN+V + +L+ YG ++ + ++ + +M G N +
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLV-----YGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483
Query: 661 ELIEEWC 667
LI C
Sbjct: 484 TLICNLC 490
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 156/381 (40%), Gaps = 39/381 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V++ M G + +YN L+ G +E+ ++ + A+G LK D +TY +++
Sbjct: 256 VFQQMIDNGFKPNNYTYNCLIHGYLSIGKW---KEVVQMLEEMSARG-LKPDCYTYGSLL 311
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A + M+ G+ P T+ LI+ A G + + + M++ G
Sbjct: 312 NYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS 371
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHK 485
P+ NI A + D+A +F R LS V G D R+ + E K
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 486 DKQSITN--TPNFVPNSH------------------YSSFDKRFSFKPTTTTYNILMKAC 525
Q I TPN V + Y D+ P +N L+
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC--PNAVFFNTLICNL 489
Query: 526 CTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + RV + L++ M VG+ P+ S+T LI +G + A ++ M G+SP
Sbjct: 490 C-NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T + + R+ A+ LF EM + P +VTY T+L + E ++
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE--- 605
Query: 643 VYQDMWKAGYKANDTYLKELI 663
+Y +M +G K D Y +I
Sbjct: 606 LYLNMINSGTKC-DIYTYNII 625
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 162/399 (40%), Gaps = 55/399 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F F + K + A+ ++ ++H SPN+ +ID G + + +
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT NI VFNSL+ + E+ M G+ + +N L+ C G
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ + + ++H+ GV + D F+Y+ ++ + A KV + M+S G++P +T
Sbjct: 496 MEGRRLIDLMEHV---GV-RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ +A ++ A LF EML+ G P N +L + +F A L+ +
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S T+ + TYNI
Sbjct: 612 NSGTKCDI-----------------------------------------------YTYNI 624
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C +A + + + GL N I++TI+I A G E A+ + + +G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ P+VV Y + + L++ SLF M+ PN
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 723
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 169/420 (40%), Gaps = 51/420 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFT 308
PN Y +I G + + + E++ ++ + + Y + SL+N + +F
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF- 325
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ +++Y IL+ G E++ + + G L D ++
Sbjct: 326 --FFDSMIRKGIKPKVSTYGILIHGYATKGAL---SEMHSFLDLMVENG-LSPDHHIFNI 379
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+A A+ + M G++PN + + +LI+A G V+ A F +M+ G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW-------------TLSKTQVALGEDYDGN 475
PN N L+ +++RA L TL +G +G
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
I MEH + P++ FS+ P + Y + + TD + +
Sbjct: 500 R-LIDLMEHVGVR---------PDA--------FSYTPLISGYCLTGR---TD--EAEKV 536
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ M ++GLSP +++ L+ + ++ A + + M G++P VV Y T + +
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+KR +A L+ M + + ++ TY +L + V + ++Q + G + N
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC---VDEAFKMFQSLCSKGLQLN 653
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL-----MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T +Y IL+K C + +AL M + PN +S++I+I+ G V+
Sbjct: 159 PDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKP 218
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M + G+ PDVV YTT I +++ +A +F++M +PN TY L+
Sbjct: 219 YNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHG 278
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G EV Q L ++M G K + L+ C+
Sbjct: 279 YLSIGKWKEVVQML---EEMSARGLKPDCYTYGSLLNYLCK 316
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ + VT + +N++++ +F+ E+Y NM G D+ +YNI+L C
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC 630
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N V E + + L +KG L+L++ T++ ++ + A+ + + + G+
Sbjct: 631 -KSNCV--DEAFKMFQSLCSKG-LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 686
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
PN +T+ + G +E+ LF M + G PNSQ N L++ + RA
Sbjct: 687 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 500 SHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKALMNEMRTVGL------SPNHISW 551
SH++ + S K P TY+IL+ C R+ L + GL +HI+
Sbjct: 73 SHFNRMVRECSDKVAPNLCTYSILIGRFC----RMGHLEHGFAAFGLILKTGWRMDHIAI 128
Query: 552 TILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
L+ C G E +L+ M E G PD V+YT +K KR ++A L M
Sbjct: 129 NQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMA 188
Query: 611 H---YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ PN+V+Y ++ G +V + ++ +M G + +I+ C
Sbjct: 189 DDHGRRCPPNVVSYSIVINGFFTEG---QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245
Query: 668 EGVIQDKNQN 677
+ + D+ +
Sbjct: 246 KAQLFDRAEG 255
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 64/384 (16%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ + FNSL+ L +++ M G D SY L++ C G A E++
Sbjct: 163 DAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF 222
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E++ + D++T++ +VK DA+ + L + + M G P T +++L++
Sbjct: 223 RELE--------QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
E+A + EM G P + C ++ A + A R+F S L +
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE-- 332
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
P TYN +++ C
Sbjct: 333 ---------------------------------------------PNVWTYNAMVQGFCN 347
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y+ AL+++MR G+ P+ +++ +LI G++E A ++L++M +G++ D
Sbjct: 348 VGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYT 407
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I ++ ++ +A SLF+ +++ I+PN VT+ T++ + G L +
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFL---E 464
Query: 646 DMWKAGYKANDTY-LKELIEEWCE 668
M AG A DTY IE C+
Sbjct: 465 KMVSAGC-APDTYTYSPFIENLCK 487
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 29/349 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M++LG +Y L+ C A+++ E + G++ V T +
Sbjct: 250 LYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE---MFDNGLVPCAV-TCTA 305
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V + A++V E M G PN T+++++ N G V +AM L ++M + G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNMEHK 485
EP+ N+L++ C++ + AFRL R L + + Y N D +
Sbjct: 366 VEPDVVTYNLLIRGQCIDG-HIESAFRLLR---LMEGNGLAADQYTYNVLIDALCKTGKV 421
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
D+ S + + R +P + T+N ++ C + + +M + G
Sbjct: 422 DEAC----------SLFDGLEYR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 544 LSPNHISWTILID-ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+P+ +++ I+ C G+ EG I +++++D + P V YT I + + A
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD-VKPSTVNYTIVIDRLFKERNYGLA 529
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +M P++VTY T +RA G LHE + V +M K G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN---VVMEMKKGG 575
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 144/369 (39%), Gaps = 36/369 (9%)
Query: 309 LEVYKNMQKLGVMADM-ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L ++ +M G A A+YN L++A C + AQ L + + D FT++
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLS----LMVRSGWRPDAFTFN 168
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ + + +A + + M G + + +++++LI G V++A+ LF E+ Q
Sbjct: 169 SLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ- 227
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNM 482
P+ L++ +A + + + + W + A D +
Sbjct: 228 ---PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEA 284
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
E + N P T ++ A C + A+ M+
Sbjct: 285 EKMLNEMFDN-----------------GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN ++ ++ G V A+ +L MRE G+ PDVV Y I+ ++
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
AF L M+ + + TY L+ A + G +V + +++ + G + N
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTG---KVDEACSLFDGLEYRGIRPNSVTFN 444
Query: 661 ELIEEWCEG 669
+I C+G
Sbjct: 445 TVINGLCKG 453
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/494 (17%), Positives = 187/494 (37%), Gaps = 77/494 (15%)
Query: 201 CVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY 257
C +PDV NL IR CI + SA R + + + + Y
Sbjct: 364 CGVEPDVVTYNLLIRGQCI-----------------DGHIESAFRLLRLMEGNGLAADQY 406
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNM 315
+ID G ++ ++++ L + + N FN+++N KF + + M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G D +Y+ ++ C T ++E + + K V K Y+ ++
Sbjct: 467 VSAGCAPDTYTYSPFIENLC---KTKGSREGLSFIDEMLQKDV-KPSTVNYTIVIDRLFK 522
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ + +A ++ M+S G +P+ +T+++ + A N G + +A ++ EM + G ++
Sbjct: 523 ERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMA 582
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ + D A + + T + + PN
Sbjct: 583 YNTLIDGHTSIGKTDHAVTILKHMT----------------------------GVASMPN 614
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISW 551
H++ F ++ +K + V L M+ + + ++
Sbjct: 615 -----HFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAY 669
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ ++ ++ M+ED + + YT+ + + + A++L M
Sbjct: 670 LAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIG 729
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM-WKAGYKANDTYLKELIEEWCEGV 670
+ PNL++Y LL + G ++ +++ + WK Y ++ K +I +G+
Sbjct: 730 HGFLPNLISYQYLLSGFTAEGQADRAKE---IFRGLRWKE-YNTDEIVWKIII----DGL 781
Query: 671 IQDKNQNQGEVTLC 684
I+ QG +C
Sbjct: 782 IR-----QGHPDMC 790
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 53/318 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M K G ++ +YN L+ + A A ++ +++ + + D TY T+
Sbjct: 404 KLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEP----DRVTYCTL 459
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A + +A+ + E M G++P+T T+S +IN +G + A LF EM+ GC
Sbjct: 460 IDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 519
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN NIL+ +A + A L+R D Q+
Sbjct: 520 VPNIVTYNILIALQAKARNYQTALELYR----------------------------DMQN 551
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPN 547
FKP TY+I+M+ C +A+ EMR P+
Sbjct: 552 A-------------------GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPD 592
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ +L+D G +GNVE A + M G+ P+V + + +R RL A++L +
Sbjct: 593 EPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQ 652
Query: 608 EMKHYQIQPNLVTYITLL 625
M + P+L TY LL
Sbjct: 653 NMVTLGLNPSLQTYTLLL 670
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 41/300 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + A+ + K+ E M+ G PN +T++ LI++ A + +A+++F
Sbjct: 382 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGED 471
+M + GCEP+ L+ +A D A ++ ++T S LG+
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 472 YDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCT 527
GN + E D+ + PN V TYNIL ++A
Sbjct: 502 --GNLSAAHRLFCEMVDQGCV---PNIV-------------------TYNILIALQAKAR 537
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+Y L +M+ G P+ ++++I+++ G G +E A + MR++ PD Y
Sbjct: 538 NYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYG 597
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + ++ +++A+ + M + PN+ T +LL A R +H + + Q+M
Sbjct: 598 LLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLR---VHRLPDAYNLLQNM 654
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYN L+ + Y +AL N+M+ +G P+ +++ LID +G ++ A+
Sbjct: 415 QPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMS 474
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+E G+SPD Y+ I +S L A LF EM PN+VTY L L+A
Sbjct: 475 MYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQA 534
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++R Q L +Y+DM AG+K + ++E
Sbjct: 535 KAR-----NYQTALELYRDMQNAGFKPDKVTYSIVME 566
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L AL ++ ++ P+ T+ID+ G + ++YE
Sbjct: 419 VTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 478
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ + + ++ ++N + +L ++ M G + ++ +YNIL+ A N
Sbjct: 479 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 538
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+Y ++++ K D TYS +++V + + A V +M P+
Sbjct: 539 YQTALELYRDMQN----AGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEP 594
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A + ML+AG PN CN LL A F R RL ++
Sbjct: 595 VYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSA------FLRVHRLPDAY 648
Query: 460 TLSKTQVALG 469
L + V LG
Sbjct: 649 NLLQNMVTLG 658
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y+ ++ SP+ + +I+ G G+ + ++ +
Sbjct: 454 VTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCE 513
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q NI +N L + A + + LE+Y++MQ G D +Y+I+++ G
Sbjct: 514 MVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGY 573
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E++ + D Y +V ++ A + A + ML AG+ PN
Sbjct: 574 LEEAEAVFFEMR----QNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVP 629
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++A + A +L + M+ G P+ Q +LL C EA +D F
Sbjct: 630 TCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGF 684
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ M+ VGLSP+ +++++I+ G SGN+ A ++ M + G P++V Y I +
Sbjct: 474 SMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 533
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+++ + A L+ +M++ +P+ VTY ++ G L E + AV+ +M + +
Sbjct: 534 AKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAE---AVFFEMRQNHWV 590
Query: 654 ANDTYLKELIEEW 666
++ L++ W
Sbjct: 591 PDEPVYGLLVDLW 603
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L+ M +DG P+VV Y I R+ L
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++A ++F +M+ +P+ VTY TL+ ++ G L +++Y+ M + G DT+
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFL---DVAMSMYERMQEVGLSP-DTF 489
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M++ GV AD +YN L+ C +G A + ++ + + ++ +V T++
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL---MRDMVMRDIVP-NVITFTA 190
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF + A+K+ E+M V P+ T++SLIN G V++A + + M+ G
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ ++ + D +LFR Q L D I +
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLVGDTITYNTIIQGYFQAGR- 305
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
P++ F R +P TY+IL+ C ++ KAL+ M+ +
Sbjct: 306 ---------PDAAQEIF-SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 355
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+I GNVE A + + + G+ PDVV+YTT I R ++ ++ L+
Sbjct: 356 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 415
Query: 607 EEMKHYQIQP 616
+M+ + P
Sbjct: 416 RKMQEDGLLP 425
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+E G+ D+++Y+ ++ + +AL V M+ G P+ +T SSLIN
Sbjct: 35 HMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 93
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSK 463
V A+ L +M + G P+ N ++ + + A LF R+ ++
Sbjct: 94 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 153
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ G G R S+ + + + VPN +F T ++ +K
Sbjct: 154 NSLVAGLCCSG---RWSDAARLMRDMVMR--DIVPNV--------ITF---TAVIDVFVK 197
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L EM + P+ ++ LI+ G V+ A Q+L +M G PDV
Sbjct: 198 E--GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T I +SKR+ + LF EM + + +TY T+++ + G Q+ +
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 314
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN+ +IDV G + ++ +YE++ + V +++ +NSL +N + ++ K
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL--INGLCMHGRVDEAK 240
Query: 314 NMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M L G + D+ +YN L+ C + +++ E+ G D TY+TI
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTI 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A A ++ M S PN T+S L+ VE+A+ LFE M ++
Sbjct: 297 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRS 458
E + NI++ + + A+ LFRS
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRS 382
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+F ++P T + L+ C A L+++M +G P+ + + +ID G V
Sbjct: 73 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M DG+ D V Y + + S R A L +M I PN++T+ ++
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192
Query: 626 RARSRYGSLHEVQQCLAVYQDM 647
+ G E + +Y++M
Sbjct: 193 DVFVKEGKFSEA---MKLYEEM 211
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 197/438 (44%), Gaps = 29/438 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + F K L +D + SPN+ + +I+ G C G + ++ A+
Sbjct: 81 VVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN--GFCKKGLWREATAVL 138
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++Y + ++ D + L+++ M + G +YN+L+ C
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VT 395
G A +I+ + + KG +L+V +Y+T++ + A+K+ +L G V
Sbjct: 199 GCIGDAFKIF---ETMLEKGK-RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ IT++++I G +++A+ +++ M++ G N C+IL+ +++ D+A L
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ V Y D M + NF S K PT
Sbjct: 315 WKR-VHKLGLVPSSTTYSVMIDGFCKM---------HMLNFAKG--LFSRMKISGLSPTL 362
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN LM + C + + + L EM+ P+ IS+ I+ID +G++ A ++L
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ G++PD Y++ I + ++++A F+ M I P+ Y +L++ +G
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG---FGL 479
Query: 634 LHEVQQCLAVYQDMWKAG 651
E+++ + + + M G
Sbjct: 480 NDEIEEVINLLRQMADMG 497
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 191/451 (42%), Gaps = 29/451 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+C + K+ + A+R K+ ++ + T+I G C G + +A++++
Sbjct: 48 YCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLIS--GFCSKGCLDRGKALFDE 105
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ N+ V++ L+N + V M + G+ D+ +Y ++ C G
Sbjct: 106 MLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR 165
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +++ + KG + TY+ ++ A K+ E ML G +
Sbjct: 166 ARKALDLF---DLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACVEACQFDRAFRLFR 457
++++LI N G +++AM LF +L+ G EP+ N ++Q + + D+A ++
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY- 280
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T + G + T I E+ I H + P++TT
Sbjct: 281 -----DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH------KLGLVPSSTT 329
Query: 518 YNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y++++ C + K L + M+ GLSP + L+ + ++E A ++ + M+
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E PD +++ I +++ + A L +M+ + P+ TY + + S+ G +
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E + + M +G ++ LI+ +
Sbjct: 450 EAK---GAFDSMIASGITPDNHVYDSLIKGF 477
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 185/432 (42%), Gaps = 51/432 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ TII+ G+C + +A+ ++ + N + + LM+ ++ +
Sbjct: 8 PDIVSYNTIIN--GLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M++ G+ D+ Y+ L+ C G + ++ E+ LE KG+ +V YS +
Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM--LE-KGI-SPNVVVYSCL 121
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F W+ A V M G+ P+ T++ +I G +A+ LF+ M + G
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 430 EPNSQCCNILLQA-CVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRIS 480
EP++ N+L+ C E C D AF++F R +S + +G +G D
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGD-AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE-- 238
Query: 481 NMEHKDKQSITNTPNFV-PN---------------------SHYSSFDKRFSFKPTTTTY 518
K S+ N+V P+ Y + +R SF T +
Sbjct: 239 --AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 519 NIL---MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
++ +K+ D + L + +GL P+ +++++ID + A + M+
Sbjct: 297 ILIGEYIKSGIID--KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+SP + Y T + + L+QA LF+EMK +P+ +++ ++ + G +H
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414
Query: 636 EVQQCLAVYQDM 647
++ L Q M
Sbjct: 415 SAKELLNDMQQM 426
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 109/276 (39%), Gaps = 52/276 (18%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ ++++++IN +E+A+ L EM + CEPNS IL+ + + + A
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL LGE KR +
Sbjct: 66 RL------------LGEM-----------------------------------KRKGLEV 78
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y+ L+ C+ R KAL +EM G+SPN + ++ LI+ G A +L
Sbjct: 79 DVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVL 138
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+ PDV YT I + R ++A LF+ M +P+ VTY L+ +
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
G + + +++ M + G + LI C
Sbjct: 199 GCIGDA---FKIFETMLEKGKRLEVVSYNTLIMGLC 231
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KR + P +YN ++ C + KA L+ EM PN ++ IL+D G V
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A+++L M+ G+ DVV Y+T I L + +LF+EM I PN+V Y L
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ + G E AV M + G + +
Sbjct: 122 INGFCKKGLWREAT---AVLHTMTERGIQPD 149
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+ + PD+V+Y T I + KRL++A L EM+ +PN TY L+ + G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
+ E + L +M + G + + LI +C D+ +
Sbjct: 61 VEEAMRLLG---EMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ + + P+ +S+ +I+ +E A+ +L M P+ Y + + R
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+++A L EMK ++ ++V Y TL+ G L + A++ +M + G N
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK---ALFDEMLEKGISPNVVV 117
Query: 659 LKELIEEWCE 668
LI +C+
Sbjct: 118 YSCLINGFCK 127
>gi|356532361|ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 646
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 142/323 (43%), Gaps = 46/323 (14%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ +K+F + K ++ A K+ ++ML GV PN IT+S++I + L +A+ FE
Sbjct: 121 VILYNVTLKLFREVKDFEGAEKLFDEMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFE 180
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------------ALGE 470
M GCEP+ C+ ++ + D A RL+ K V +
Sbjct: 181 MMPSFGCEPDDNVCSSMIYSYARTGNADMALRLYDRAKAEKWHVDTVVFSGLIKMHGMSG 240
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
+YDG + +++ K KP TYN L+ A
Sbjct: 241 NYDGCLNVYNDL------------------------KVLGAKPNLVTYNALLYAMGRAKR 276
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYT 587
KA+ EM GL+PN ++ L+ A C N + AL + K M+E G D++ Y
Sbjct: 277 ARDAKAIYEEMINNGLTPNWPTYAALLQAYCRARFNRD-ALNVYKEMKEKGKDLDILLYN 335
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+C +A +FE+MK +P+ TY +L+ S G + E++ A++ +
Sbjct: 336 MLFDMCANVGCEGEAVKIFEDMKSSGTCRPDSFTYASLINMYSSIGKISEME---AMFNE 392
Query: 647 MWKAGYKANDTYLKELIEEWCEG 669
M ++G++ N L L+ C G
Sbjct: 393 MMESGFEPNIIVLTSLVH--CYG 413
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR YD +K + + +I + G+ G+Y +Y DL+ N+ +N+L+
Sbjct: 210 ALRLYDRAKAEKWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKPNLVTYNALLY 269
Query: 300 V-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
A D K +Y+ M G+ + +Y LL+A C A A +Y E+K
Sbjct: 270 AMGRAKRARDAK---AIYEEMINNGLTPNWPTYAALLQAYCRARFNRDALNVYKEMKE-- 324
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT-PNTITWSSLINACANAGL 413
KG LD+ Y+ + + A+ A+K+ EDM S+G P++ T++SLIN ++ G
Sbjct: 325 -KGK-DLDILLYNMLFDMCANVGCEGEAVKIFEDMKSSGTCRPDSFTYASLINMYSSIGK 382
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + +F EM+++G EPN L+ +A + D ++F
Sbjct: 383 ISEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIF 425
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F ++ G + L Y+ K + PN+ ++ G ++AIYE+
Sbjct: 227 VVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKPNLVTYNALLYAMGRAKRARDAKAIYEE 286
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +T N + +L+ A + L VYK M++ G D+ YN+L C G
Sbjct: 287 MINNGLTPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGC 346
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNT 398
A +I+ ++K + G + D FTY++++ +++ K +M E M+ +G PN
Sbjct: 347 EGEAVKIFEDMK---SSGTCRPDSFTYASLINMYSSIGKISEMEAMFNE-MMESGFEPNI 402
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
I +SL++ A + + +F +++ G P+ + C+ LL A +
Sbjct: 403 IVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQ 449
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 167/409 (40%), Gaps = 54/409 (13%)
Query: 179 EVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRY---ACIVPRADILFCNFVREFGKKR 235
E+L+ V E D F I+ VN LA+ Y R IL+ ++ F + +
Sbjct: 77 EILKVLGDNVLEADAVF-ILNSMVNPYTALLAVEYFKQKIKHARHVILYNVTLKLFREVK 135
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
D A + +D + +PN+ T+I +C K+ +E + S + V +
Sbjct: 136 DFEGAEKLFDEMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCS 195
Query: 296 SLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
S++ A + L +Y + D ++ L+K ++GN +Y ++K L
Sbjct: 196 SMIYSYARTGNADMALRLYDRAKAEKWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVL 255
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
AK ++ TY+ ++ AK + A + E+M++ G+TPN T+++L+ A A
Sbjct: 256 GAKP----NLVTYNALLYAMGRAKRARDAKAIYEEMINNGLTPNWPTYAALLQAYCRARF 311
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
A+++++EM + G + + N+L C A ++F ED
Sbjct: 312 NRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCEGEAVKIF-------------EDM- 357
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
K S T P+ F++ Y+ + K ++
Sbjct: 358 -------------KSSGTCRPD------------SFTYASLINMYSSIGKIS-----EME 387
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
A+ NEM G PN I T L+ G + + ++I + + G+SPD
Sbjct: 388 AMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPD 436
>gi|399216092|emb|CCF72780.1| unnamed protein product [Babesia microti strain RI]
Length = 1520
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 180/434 (41%), Gaps = 98/434 (22%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY--VFNSLMNVNAHDLKFTLEVYKNM 315
IC+ + + C C + ++ + DL +++ + Y + ++ + +N+ D LE
Sbjct: 878 ICQVLNNTC--CINQLQQLLMMTDLLQYHMSNDFYSAILDACIRINSPD--HLLESVNKY 933
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-------------------------- 349
+K G D+ +Y +L+K + N + ++ E
Sbjct: 934 KKFGFHPDLQTYGLLIKFFSSSDNVMECFHLWNEMTSLYGYELNEVTYGCMFDALVSNNM 993
Query: 350 -------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+K ++ +K + YST++K F K AL + ML GV PNTIT++
Sbjct: 994 LDEALSLLKDMKKNSNIKPNTIIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYN 1053
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTL 461
S+I+ACA G + +A +L E+ML EP+ + +++ CV++ DR+ +L R
Sbjct: 1054 SIIDACARVGDMNKAANLLEDMLNNNIEPDLITFSTVIKGYCVQS-NMDRSLQLLR---- 1108
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
A+ E KP YN L
Sbjct: 1109 -----AMSER--------------------------------------GIKPDGILYNSL 1125
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDG 578
+ C + + L +EM+ G++P++ + TILI G G ++ A Q++ ++ R+
Sbjct: 1126 LDGCVKSGRPWLCQQLWDEMQENGIAPSNFTLTILIKMYGRLGQLDKAFQLMDELPRKYN 1185
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ + YT + C+ + + K A +F M I P+ TY T++ + L++V
Sbjct: 1186 IQTNTHVYTCLMSACITNGKYKMALDVFNCMNGNGIVPDSKTYETIIFGAIKGRLLYQV- 1244
Query: 639 QCLAVYQDMWKAGY 652
D+ KA Y
Sbjct: 1245 ------IDIIKAAY 1252
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ ++ FG+ + L AL Y PN +IID C GD K+ + ED
Sbjct: 1015 IIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYNSIIDACARVGDMNKAANLLED 1074
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N+ ++ F++++ ++ +L++ + M + G+ D YN LL C +G
Sbjct: 1075 MLNNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGR 1134
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNT 398
L Q+++ E ++ G+ + FT + ++K++ A ++ +++ + NT
Sbjct: 1135 PWLCQQLWDE---MQENGIAPSN-FTLTILIKMYGRLGQLDKAFQLMDELPRKYNIQTNT 1190
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ L++AC G + A+ +F M G P+S+ ++ ++
Sbjct: 1191 HVYTCLMSACITNGKYKMALDVFNCMNGNGIVPDSKTYETIIFGAIKG 1238
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 534 ALMNEMR-TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+L+ +M+ + PN I ++ LI G + + AL I M ++G+ P+ + Y + I
Sbjct: 999 SLLKDMKKNSNIKPNTIIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYNSIIDA 1058
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
C R + +A +L E+M + I+P+L+T+ T+++ Y + + L + + M + G
Sbjct: 1059 CARVGDMNKAANLLEDMLNNNIEPDLITFSTVIKG---YCVQSNMDRSLQLLRAMSERGI 1115
Query: 653 KANDTYLKELIE 664
K + L++
Sbjct: 1116 KPDGILYNSLLD 1127
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D K PN I T+I G + N LNIY+
Sbjct: 1003 DMKKNSNIKPNTIIYSTLIKGFG-------------QTKQLNKALNIYL----------- 1038
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
M GV+ + +YN ++ AC G+ A + ++ ++ D+
Sbjct: 1039 ---------TMLDEGVVPNTITYNSIIDACARVGDMNKAANLLEDM----LNNNIEPDLI 1085
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+ST++K + +L++ M G+ P+ I ++SL++ C +G L++EM
Sbjct: 1086 TFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGRPWLCQQLWDEM 1145
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ G P++ IL++ Q D+AF+L
Sbjct: 1146 QENGIAPSNFTLTILIKMYGRLGQLDKAFQL 1176
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 181/432 (41%), Gaps = 62/432 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ I +IID +C D + A ++ + Q ++ +I+ + S
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIID--SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M ++ D+ ++ ++ A C G A EI V +
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI---VDMMI 293
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + DV TY+T++ A+KV + M+ G P+ I++++LIN +
Sbjct: 294 QRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 352
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++AM+LFEEM + P+++ N L+ + A LF VA G+
Sbjct: 353 DKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE------MVARGQ---- 402
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P TY+IL+ + C + +
Sbjct: 403 -------------------------------------MPDLVTYSILLDSLCKNCHLEEA 425
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + L+P+ + I+ID +G +E A + + G+ P V Y I
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L +A LF EM P+ TY T+ R + +E + + + ++M G+
Sbjct: 486 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG---FLQNNETLRAIQLLEEMLARGF 542
Query: 653 KANDTYLKELIE 664
A+ + L+E
Sbjct: 543 SADVSTTTLLVE 554
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 157/367 (42%), Gaps = 31/367 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + M GV ++ + NIL+ + C A + ++ L + D T++T
Sbjct: 76 LSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQP----DPTTFTT 131
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ AL + + M+ G PN +T+ +LIN G A+ L M Q
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--- 485
C+P+ ++ + + Q AF LF +G+ + +++ H
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQ--------MVGQGISPDIFTYTSLVHALCN 243
Query: 486 --DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+ + +T N + NS P ++ ++ A C + +A +++ M
Sbjct: 244 LCEWKHVTTLLNQMVNS---------KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ +++T L+D ++ A+++ +M G +PDV++YTT I + ++ +
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A LFEEM + P+ TY TL+ G L Q +A++ +M G +
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL---QDAIALFHEMVARGQMPDLVTYSI 411
Query: 662 LIEEWCE 668
L++ C+
Sbjct: 412 LLDSLCK 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 172/384 (44%), Gaps = 32/384 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ +++ + + N+ + +L+N + + + ++M++
Sbjct: 135 GLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 194
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y ++ + C A ++ + + +G+ D+FTY+++V + W+
Sbjct: 195 DVVIYTSIIDSLCKDRQVTEAFNLFSQ---MVGQGI-SPDIFTYTSLVHALCNLCEWKHV 250
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+++ + P+ + +S++++A G V +A + + M+Q G EP+ L+
Sbjct: 251 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 310
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNFVPNS 500
+ D A ++F + D T I+ HK +++
Sbjct: 311 HCLQSEMDEAVKVFDM----MVRKGFAPDVISYTTLINGYCKIHKIDKAMY--------- 357
Query: 501 HYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILI 555
F++ R + P T TYN LM C R++ AL +EM G P+ ++++IL+
Sbjct: 358 ---LFEEMCRKEWIPDTKTYNTLMHGLC-HVGRLQDAIALFHEMVARGQMPDLVTYSILL 413
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D+ + ++E A+ +LK + ++PD+ Y I R+ L+ A LF + +
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473
Query: 616 PNLVTYITLLRARSRYGSLHEVQQ 639
P++ TY ++ + G L+E +
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANK 497
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/416 (17%), Positives = 164/416 (39%), Gaps = 57/416 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ +++ +C +C ++ +
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC-EWKHVTTLLN 255
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ +F+++++ + K T E+ M + GV D+ +Y L+ CL
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 315
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + + DV +Y+T++ + A+ + E+M P+T
Sbjct: 316 EMDEAVKVF----DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++L++ + G ++ A+ LF EM+ G P+ +ILL + + C + A L ++
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S + P Y
Sbjct: 432 IEAS-----------------------------------------------NLNPDIQVY 444
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + + L + + + GL P+ ++ I+I G + A ++ M
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ SPD Y T + +++ +A L EEM ++ T L+ S G
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 503 SSFDKRFSFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
SSF++ P + + + A Y V +L +M + G+ PN + ILI++
Sbjct: 42 SSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSF 101
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
V A +L + + G PD +TT I+ +CV K + +A LF++M QPN
Sbjct: 102 CHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK-IGEALHLFDKMIDEGFQPN 160
Query: 618 LVTYITLLRARSRYGS 633
+VTY TL+ + G+
Sbjct: 161 VVTYGTLINGLCKVGN 176
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 179/422 (42%), Gaps = 72/422 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G L SA++ Y K PN++I T+ID+ G + + +Y
Sbjct: 294 LLICS-CKELGH---LDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQFNEGEKLYMK 349
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+S + L++ F+ + M V A LK V + M+K DM
Sbjct: 350 LKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEK---EKDMVP------------- 393
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
D++ + +++V+ + +L +GV +
Sbjct: 394 ----------------------DIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQE 431
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LIN CA A V + LF EMLQ G +PN+ N++L +A F++A LF
Sbjct: 432 LYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELF--- 488
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + L + NT + +D +++ +T H FD F + YN
Sbjct: 489 -MMARKRGLVDVISYNTIIAAYGRKRDFKNMASTI------HTMQFD---GFSVSLEAYN 538
Query: 520 ILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILK 572
C D Y + M R+V + +H ++ I+++ G G ++ +L
Sbjct: 539 -----CVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLT 593
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---ITLLRARS 629
+RE G+ PD+ +Y T IK + ++ A L +EM+ ++P+ +TY IT L+
Sbjct: 594 ELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRQNGVEPDKITYTNLITTLQKND 653
Query: 630 RY 631
+Y
Sbjct: 654 KY 655
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 177/434 (40%), Gaps = 69/434 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASY 327
Y K+ + +R V LN+ N L+ +NA+ + LE + MQ+ + +Y
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLE--NWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAY 118
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA------DAKWWQM 381
NIL+ A N V AQ ++ +++ L+ D TY ++++ + +A+W+
Sbjct: 119 NILITGYGKASNMVAAQRLFSGIQN----AGLEPDDTTYRSMIEGWGRVGNYKEAEWYYK 174
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK G PN+ +LIN A G E A ++ML+ GC+ +S LL+
Sbjct: 175 ELK------RLGFKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSS-ILGTLLK 227
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + + D+ L + V + N+ I + + + + +
Sbjct: 228 AYEKVGRIDKIPFLLKGSFYQHVTV------NQNSCSILVIAYVKNLLVDEAIKLLGDKK 281
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN-------HISWTIL 554
++ D F Y++L+ +C + L + ++ L P HIS T +
Sbjct: 282 WN--DPVFE----DNLYHLLICSC----KELGHLDSAVKIYSLMPKSDDRPNLHISCT-M 330
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQ 613
ID G ++ ++ G+ DV+A++ I++ V++ LK A S+ E M K
Sbjct: 331 IDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKD 390
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
+ P++ + +LR + G + K ND Y K L GV+ D
Sbjct: 391 MVPDIYLFRDMLRVYQQCGMMD-----------------KLNDLYFKILK----SGVVWD 429
Query: 674 KNQNQGEVTLCRRT 687
+ + C R
Sbjct: 430 QELYNCLINCCARA 443
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 134 GVLKKLNELGVAPLE---LFDGSGFKLLKNECQRLLDSGEVEMFVG--LMEVLEEFRLPV 188
G++ KLN+L L+ ++D + L N C R L GE+ L + +
Sbjct: 409 GMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITF 468
Query: 189 KELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDAS 247
+ + + +L ++ + R +V D++ N + +G+KRD +
Sbjct: 469 NVMLDVYAKAKLFNKARELFMMARKRGLV---DVISYNTIIAAYGRKRDFKNMASTIHTM 525
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ S ++ ++D G G R++ + +++ + T + Y +N +MN+ +L +
Sbjct: 526 QFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYG-ELGW 584
Query: 308 TLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
EV + +L G+ D+ SYN L+KA +AG + ++ G VK + GV + D
Sbjct: 585 IDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAG---MVEDAVGLVKEMRQNGV-EPDKI 640
Query: 365 TYSTIVKV------FADAKWWQMALK 384
TY+ ++ + +A W + +K
Sbjct: 641 TYTNLITTLQKNDKYLEAVKWSLWMK 666
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 70/379 (18%), Positives = 141/379 (37%), Gaps = 72/379 (18%)
Query: 340 TVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPN 397
T + Q GE +++ K + LDV +S +++++ A + A V E M + P+
Sbjct: 335 TTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPD 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++ G++++ L+ ++L++G + + N L+ C A RLF
Sbjct: 395 IYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLF- 453
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ M + F P T T
Sbjct: 454 ----------------------NEMLQR------------------------GFDPNTIT 467
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNH------ISWTILIDACGGSGNVEGALQIL 571
+N+++ D Y L N+ R + + IS+ +I A G + + +
Sbjct: 468 FNVML-----DVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAYGRKRDFKNMASTI 522
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ DG S + AY + + +++ S+ + MK+ + TY ++ Y
Sbjct: 523 HTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNI---Y 579
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW-CEGVIQDKNQNQGEVTLCR--RTN 688
G L + + V ++ + G + LI+ + G+++D V L + R N
Sbjct: 580 GELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDA------VGLVKEMRQN 633
Query: 689 SQRPQSLLLEKVAVHLQKS 707
P + + LQK+
Sbjct: 634 GVEPDKITYTNLITTLQKN 652
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 57/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+++I + C G Y K + +++ S + N+Y++ + D K ++
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K GV+ ++ +Y+ ++ C GN A +Y E+ E L +V + T+V
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE----LLPNVVVFGTLVD 312
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A+ A + M+ GV PN ++ LI+ +G + +A+ L EM P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 432 NSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ IL+ C+E Q A RLF Q +
Sbjct: 373 DVFTYTILINGLCIED-QVAEANRLF-------------------------------QKM 400
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N F P++ TYN L+ C +Y +A L +EM G+ PN
Sbjct: 401 KNERIF----------------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I+++ LID +++ A+ + M G+ PDVV YT I + +K+A L+ +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSL 634
M I PN T+ L+ + G L
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRL 530
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 163/377 (43%), Gaps = 29/377 (7%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M G++ D+ Y +L + C G +++ E+ L +K +V+ Y+ +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG----IKPNVYIYTIYIL 242
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E M GV PN T+S++I+ G V QA L++E+L A P
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ F +A L + +L V G D N + + H +S
Sbjct: 303 NVVVFGTLVDG------FCKARELVTARSLFVHMVKFG--VDPNLYVYNCLIHGHCKS-- 352
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + S + + P TY IL+ C + +A L +M+ + P+
Sbjct: 353 --GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI N+E AL + M G+ P+++ ++T I + +K A L+ EM
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCE 668
I P++VTY L+ A + ++ E L +Y DM +AG ND L++ W E
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEA---LRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 669 GVI-------QDKNQNQ 678
G + Q+ NQ +
Sbjct: 528 GRLSVAIDFYQENNQQR 544
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 178/410 (43%), Gaps = 32/410 (7%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
++ + + + A + ++ KKH PN+Y +ID G C G+ ++ +Y+++
Sbjct: 240 YILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID--GYCKTGNVRQAYGLYKEILV 297
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ N+ VF +L++ A +L ++ +M K GV ++ YN L+ C +GN +
Sbjct: 298 AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + E++ L L DVFTY+ ++ A ++ + M + + P++ T++
Sbjct: 358 AVGLLSEMESLN----LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ +EQA+ L EM +G EPN + L+ A L+ T+
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 463 K------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T AL D + + E S PN H + +K
Sbjct: 474 GIVPDVVTYTAL---IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ I D+Y+ N+ R+ NH+ +T LI+ +G + A + MR
Sbjct: 531 SVAI-------DFYQEN---NQQRSCW---NHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
G++PD+ +Y + +K ++ KR+ L +M I PNL+ L R
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F V F K R+LV+A + K PN+Y+ +I G+ +++ + +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S N++ +++ + L+N + +++ M+ + A+YN L+ C N
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E + A GV + ++ T+ST++ + + + + A+ + +M G+ P+ +
Sbjct: 425 MEQALDLCSE---MTASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
T+++LI+A +++A+ L+ +ML+AG PN
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 33/390 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV+ +M K+GV D+ ++N+L+ CL G ++ G ++ + ++ + D TY+TI
Sbjct: 190 EVFDDMVKIGVSLDVKTFNVLVNGYCLEGK---LEDALGMLERMVSEFNVNPDNVTYNTI 246
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K + + DM G+ PN +T+++L+ G +++A + E M Q
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
P+ NIL+ A L +S L V DG + ++E K
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366
Query: 487 KQSITNTPNFVPN--SHYSSF------DKR-------------FSFKPTTTTYNILMKAC 525
PN +H S +KR F P TY+ L+KA
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
D +M EM G+ N I+ ++DA V+ A +L + G D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y T I R +++++AF +++EMK +I P + T+ +L+ +G + + +
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG---KTELAMEK 543
Query: 644 YQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
+ ++ ++G +D +I +C EG ++
Sbjct: 544 FDELAESGLLPDDCTFNSIILGYCKEGRVE 573
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 184/423 (43%), Gaps = 61/423 (14%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G ++ I E ++ N+ ++ +N L+N NA ++ LE+ M+ L +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKL 341
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWW 379
D+ +YN L+ C G ++ A+++ ++ +E GV K + T++ +K + + K
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEAKKL---MEQMENDGV-KPNQVTHNISLKWLCKEEKRE 397
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++ KVKE + G +P+ +T+ +LI A G + A+ + EM Q G + N+ N +
Sbjct: 398 EVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
L A + + D A L S K + E G E K +++
Sbjct: 458 LDALCKERKVDEAHNLLDSA--HKRGYIVDEVTYGTLIMGYFREEKVEKA---------- 505
Query: 500 SHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
+ +D KR PT TT+N L+ C A+ +E+ GL P+ ++ +I
Sbjct: 506 --FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSII 563
Query: 556 DACGGSGNVEGALQ-------------------ILKIMREDGMSP--------------- 581
G VE A + +L + ++GM+
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV 623
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T I + K+LK+A+ L EM+ +++P+ TY +++ + G L E + L
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELL 683
Query: 642 AVY 644
+
Sbjct: 684 KKF 686
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 21/266 (7%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++A +AG A+ +F++M++ +PN CN LL V ++ +F +
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFSI 185
Query: 456 FRSWTLSKTQVALGEDYDGNT-DRISN---MEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ + V +G D T + + N +E K + ++ V F+
Sbjct: 186 ASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMV---------SEFNV 236
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN ++KA VK L+ +M+ GL PN +++ L+ G+++ A Q
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I+++M++ + PD+ Y I + +++ L + MK ++QP++VTY TL+
Sbjct: 297 IVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCF 356
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKAN 655
G E ++ + + M G K N
Sbjct: 357 ELGLSLEAKKLM---EQMENDGVKPN 379
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILL 331
K+ ++++++ +T + FNSL+ H K +E + + + G++ D ++N ++
Sbjct: 504 KAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSII 563
Query: 332 KACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C G A E Y E +KH K D +T + ++ + AL ++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKH-----SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ +T+T++++I+A +++A L EM + EP+ N ++ + +E +
Sbjct: 619 TEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677
Query: 451 RAFRLFRSWT 460
A L + ++
Sbjct: 678 EADELLKKFS 687
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P + A+ + + + A +F++M +++PNL+T TLL RY S +
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
V+ DM K G + L+ +C EG ++D
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLED 222
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 163/379 (43%), Gaps = 55/379 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--T 308
L N+ + T+I C G ++ +YE + S+ +++ ++ LM+ +F
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + M++ G ++ +Y+ LL + C G + + + + AKG ++ Y+
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNG---MWDDARAMLDQMLAKG-FSMNSQGYNG 423
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ A ++ ++M S G P+ T++++I N L+E+A H+F +++ G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N N L+ A + ++ RL L Q+ D IS
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL----------DVIS-------- 525
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
YN L+KA C + R AL+ EM T G+ P
Sbjct: 526 -----------------------------YNGLIKALCKEGNVDRSMALLEEMVTKGIKP 556
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N+ S+ +LI+ +G V AL++ K M G++PD+V Y T I + A +L
Sbjct: 557 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616
Query: 607 EEMKHYQIQPNLVTYITLL 625
E++ + + P++VTY L+
Sbjct: 617 EKLPNENVHPDIVTYNILI 635
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 34/318 (10%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N +++ C G A E+Y + + +KG DV TYS ++ + A+++ +
Sbjct: 317 NTVIRGCLTEGKLARATELY---EMMGSKGCPP-DVHTYSILMHGLCKLGRFGSAVRMLD 372
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G PN +T+S+L+++ G+ + A + ++ML G NSQ N ++ A +
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNT--------DRISNMEHKDKQSITNTPNFVPN 499
+ D+A RL + K+Q + NT D + EH + I V N
Sbjct: 433 KLDQATRLVQEM---KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE--GVVAN 487
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
TYN L+ A + + L +EM G + IS+ LI A
Sbjct: 488 G---------------ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GNV+ ++ +L+ M G+ P+ +Y I ++ +++ A L +EM + + P+
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592
Query: 618 LVTYITLLRARSRYGSLH 635
+VTY TL+ + G H
Sbjct: 593 IVTYNTLINGLCKVGWTH 610
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 26/324 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R D ++ +PN+ T++ G + +RA+ + + ++ ++N +N ++
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D K + + M+ G D+ +YN ++ C N L +E ++L +
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC---NNDLMEEAEHIFRNLIEE 482
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+T++ WQ L++ +ML G + I+++ LI A G V++
Sbjct: 483 GVVA-NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+M L EEM+ G +PN+ N+L+ E C +A ++ + LSK + G D T
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLIN---ELC---KAGKVRDALELSKEMLNQGLTPDIVT 595
Query: 477 -DRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ + N K + N +PN + P TYNIL+ C
Sbjct: 596 YNTLINGLCKVGWTHAALNLLEKLPNE---------NVHPDIVTYNILISWHCKVRLLDD 646
Query: 534 A--LMNEMRTVGLSPNHISWTILI 555
A L+++ + G+ PN +W +++
Sbjct: 647 AAMLLDKAISGGIVPNERTWGMMV 670
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 173/455 (38%), Gaps = 59/455 (12%)
Query: 271 DYMKSR-AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
D M R A+ RS NV V ++L + H L +Y+ M + V ++ +
Sbjct: 130 DQMPRRFAVSPSFRSYNV-----VLSTLARADCH--ADALLLYRRMLRDRVPPTTFTFGV 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+A C G A + ++ + G + D Y T++ A + ++M
Sbjct: 183 AARALCRLGR---AGDALALLRGMARHGCVP-DAVLYQTVIHALVAQGGVAEAAMLLDEM 238
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G + T++ L+ G V +A L + M+ GC P+ LLQ Q
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298
Query: 450 DRAF----RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
D A RL + V G +G R + + + + P+ H
Sbjct: 299 DEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATEL-----YEMMGSKGCPPDVH---- 349
Query: 506 DKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TY+ILM C + +++EM G +PN ++++ L+ + +G
Sbjct: 350 -----------TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 398
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A +L M G S + Y I + +L QA L +EMK +P++ TY T
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE------EWCEGV------- 670
++ + E + +++++ + G AN LI W EG+
Sbjct: 459 MIYHLCNNDLMEEAEH---IFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML 515
Query: 671 -----IQDKNQNQGEVTLCRRTNSQRPQSLLLEKV 700
+ + N LC+ N R +LL E V
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 64/403 (15%)
Query: 273 MKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYN 328
MK AI +E + +++ L+N A D +VYK M ++GV A++ YN
Sbjct: 145 MKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYN 204
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+L+ ACC +G+ A + E +E+K V D+FTY+T++ ++ AL V++
Sbjct: 205 VLIHACCKSGDVEKADNLLSE---MESKCVFP-DLFTYNTLISLYCKKGMHYEALSVQDR 260
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P+ +T++SLI+ G + +AM LF+E+ A PN L+
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLND 318
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D+A RL E + Q +
Sbjct: 319 LDQALRL--------------------------REEMEAQGLY----------------- 335
Query: 509 FSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
PT TYN +++ C + R++ L+NEM + P++++ LI+A G+++
Sbjct: 336 ----PTVVTYNSILRKLC-EIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMK 390
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M E G+ D Y I + + + A L M P+ TY L+
Sbjct: 391 SALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLV 450
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y + + L + + + G + + + LI +C+
Sbjct: 451 DG---YCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCK 490
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 29/310 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+S +V V+A+ K Q A++V E M+ G P+ + L+N+ A L + ++++M
Sbjct: 133 FSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMA 192
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N N+L+ AC ++ ++A L +++ + + NT IS K
Sbjct: 193 RIGVEANIHVYNVLIHACCKSGDVEKADNLLSE---MESKCVFPDLFTYNT-LISLYCKK 248
Query: 486 DKQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
HY + +R KP TYN L+ C + +A L E
Sbjct: 249 -------------GMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE 295
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R +PNH+++T LID +++ AL++ + M G+ P VV Y + ++ R
Sbjct: 296 IRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGR 353
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
++ A L EM +I+P+ VT TL+ A + G +++ L V M +AG K +
Sbjct: 354 IRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIG---DMKSALKVKNRMVEAGLKLDQFT 410
Query: 659 LKELIEEWCE 668
K LI +C+
Sbjct: 411 YKALIHGFCK 420
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 155/374 (41%), Gaps = 22/374 (5%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-LKF-TLEVY 312
N+++ +I C GD K+ + ++ S+ V +++ +N+L+++ + + L V
Sbjct: 199 NIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQ 258
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++ G+ D+ +YN L+ C G A ++ E++ V TY+T++
Sbjct: 259 DRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHV------TYTTLIDG 312
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ AL+++E+M + G+ P +T++S++ G + A L EM + EP+
Sbjct: 313 YCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPD 372
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ CN L+ A + A + + V G D T + + +
Sbjct: 373 NVTCNTLINAYCKIGDMKSALK------VKNRMVEAGLKLDQFTYKALIHGFCKIREMDG 426
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHIS 550
+ S D FS P+ TY+ L+ C V L +E GL +
Sbjct: 427 AKELL----LSMLDAGFS--PSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI V+ A +I +M+E G D V YT+ + + A L +EM
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540
Query: 611 HYQIQPNLVTYITL 624
++ L Y L
Sbjct: 541 KRRLMITLKIYRAL 554
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
+ DI+ N + F K+ + A+R + + ++PN T+ID G C D ++
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTTLID--GYCRLNDLDQA 322
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E++ +Q + + +NS++ ++ ++ M + + D + N L+ A
Sbjct: 323 LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINA 382
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A + VK+ + LKLD FTY ++ F + A ++ ML AG
Sbjct: 383 YCKIGDMKSALK----VKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAG 438
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+P+ T+S L++ N E + L +E ++ G + L++ + Q D A
Sbjct: 439 FSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAK 498
Query: 454 RLFRSWTLSKTQVALGE 470
++F +L + + LG+
Sbjct: 499 KIF---SLMQEKGTLGD 512
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 173/397 (43%), Gaps = 38/397 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ MQ +G + +YN+L+ +G A+E+ ++ L L++ V+TY
Sbjct: 222 LQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG----LEVSVYTYDP 277
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ + + + A ++ E+MLS G P +T+++++ G V A L + M+
Sbjct: 278 LIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNM 482
P+ N L+ AF LF R +L+ + V DG D M
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397
Query: 483 EHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------SFKPTTTTY--NI 520
KD + I + P+ P+ +++F + F +P Y I
Sbjct: 398 RLKD-EMIKHGPD--PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRI 454
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ + D + + EM G P+ I++ + ID GN++ A +++K M +G+
Sbjct: 455 VGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 514
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD V YT+ I + + L++A +LF EM I P++VTY L+ + + G L +
Sbjct: 515 PDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL---KLA 571
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ + +M + G N LI C+ D+ N
Sbjct: 572 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYN 608
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 167/390 (42%), Gaps = 31/390 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLG 319
G C G ++ + E++ S+ + +N++M D + L+V N
Sbjct: 281 GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN--- 337
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+M D+ SYN L+ GN A ++ E+++ L V TY+T++
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS----LAPSVVTYNTLIDGLCRLGDL 393
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+A+++K++M+ G P+ T+++ + G + A LF+EML G +P+
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ ++ +AF + + +A G D T + ++ V
Sbjct: 454 IVGELKLGDPSKAF------GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
Y+ P TY ++ A + +AL EM + G+ P+ +++T+LI +
Sbjct: 508 MLYNGL------VPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHS 561
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G ++ A+ M E G+ P+V+ Y I + +++ QA++ F EM+ I PN
Sbjct: 562 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPN 621
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ G Q+ L +Y+DM
Sbjct: 622 KYTYTILINENCNLGHW---QEALRLYKDM 648
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 167/383 (43%), Gaps = 43/383 (11%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV-LAQ 344
++ L IYV SL+ K L YK + K G++ D+ + N +L+ N + +A+
Sbjct: 135 DLLLWIYVKKSLLE------KCLLVFYKMVSK-GLLPDVKNCNRVLRLLRDRDNNIDVAR 187
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E+Y + G+ V TY+T++ F Q AL++ M + G +PN +T++ L
Sbjct: 188 EVYNVMVEC---GICP-TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+N +++G +EQA L ++ML+ G E + + L++ E Q + A RL LS+
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE-MLSRG 302
Query: 465 QVALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPN-----------SHYSSFDK 507
V Y+ R+S + + + N +P+ + + +
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVS--DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 360
Query: 508 RF---------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
F S P+ TYN L+ C D L +EM G P+ ++T +
Sbjct: 361 AFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVR 420
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN+ A ++ M G+ PD AY T I ++ +AF + EEM P
Sbjct: 421 GFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 480
Query: 617 NLVTYITLLRARSRYGSLHEVQQ 639
+L+TY + + G+L E +
Sbjct: 481 DLITYNVFIDGLHKLGNLKEASE 503
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 167/392 (42%), Gaps = 59/392 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+I G+ ++ ++ +LR +++ ++ +N+L++ DL + +
Sbjct: 340 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL 399
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M K G D+ ++ ++ C GN +A+E++ E+ + +G L+ D F Y I +
Sbjct: 400 KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN---RG-LQPDRFAY--ITR 453
Query: 372 VFADAKWWQ--MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + K A ++E+ML+ G P+ IT++ I+ G +++A L ++ML G
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 513
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ ++ A + A +A LF LSK
Sbjct: 514 VPDHVTYTSIIHAHLMAGHLRKARALFLE-MLSK-------------------------- 546
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPN 547
P+ TY +L+ + A+++ EM G+ PN
Sbjct: 547 --------------------GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 586
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LI+ ++ A M+ G+SP+ YT I ++A L++
Sbjct: 587 VITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYK 646
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+M +IQP+ T+ +LL+ ++ LH V+
Sbjct: 647 DMLDREIQPDSCTHRSLLKHLNKDYKLHVVRH 678
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 218 PRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPN--MYICRTIIDVCGICGDYMK 274
P D+ F FVR F K +L A +D P+ YI R + ++ GD K
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK--LGDPSK 465
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + E++ ++ ++ +N ++ H +LK E+ K M G++ D +Y ++
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFID-GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +AG+ A+ ++ E + +KG+ V TY+ ++ +A ++A+ +M
Sbjct: 525 HAHLMAGHLRKARALFLE---MLSKGIFP-SVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV PN IT+++LIN ++QA + F EM G PN IL+ +
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640
Query: 452 AFRLFR 457
A RL++
Sbjct: 641 ALRLYK 646
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYN ++ + C +AL + +M+ +G SPN +++ +L++ SG +E A ++
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ M G+ V Y I+ ++++A L EEM P +VTY T++ +
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319
Query: 631 YGSLHEVQQCLAV 643
+G + + ++ L V
Sbjct: 320 WGRVSDARKLLDV 332
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
P+ +II + G K+RA++ ++ S+ + ++ + L++ A LK +
Sbjct: 515 PDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 574
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV ++ +YN L+ C A + E ++AKG+ + +TY+ ++
Sbjct: 575 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE---MQAKGI-SPNKYTYTILIN 630
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ WQ AL++ +DML + P++ T SL+ + HL E ++ AG
Sbjct: 631 ENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHL-ENVIAAG 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N++ A ++ +M E G+ P VV Y T + + +++A L +M+ PN VTY
Sbjct: 182 NIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
L+ S G E++Q + QDM + G + + LI +CE ++ GE
Sbjct: 242 VLVNGLSHSG---EMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298
Query: 683 LCR 685
L R
Sbjct: 299 LSR 301
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 163/383 (42%), Gaps = 26/383 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
II + G K+ AI+ ++ + +NS++ + H+ ++ E+Y M G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 320 -VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D +Y+ L+ A C G A + E+K + K+ Y+ ++ +F
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKI----YTMLIALFFKLNN 276
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + E+M P+ T++ LI AG ++A + F EM + GC P++ N
Sbjct: 277 VHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINN 336
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A + D A +LF T + NT + E K + S
Sbjct: 337 MINFLGKAGRLDDAVKLFEEMG---TLQCIPSVVTYNTIIKALFESKSRIS--------- 384
Query: 499 NSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTI 553
SS+ +R P+ TY+IL+ C KA+M EM G P ++
Sbjct: 385 --EISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA G + + A ++ + ++E+ S Y IK ++ RL A +LF+EM
Sbjct: 443 LIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLG 502
Query: 614 IQPNLVTYITLLRARSRYGSLHE 636
PN+ Y L+ +R G L E
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDE 525
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 43/405 (10%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R + K + P I +I + + + ++E++R Q +++ + L+
Sbjct: 244 SAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELI 303
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+F + M++ G D N ++ AG A VK E
Sbjct: 304 RGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA------VKLFEEM 357
Query: 357 GVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLIN 406
G L+ V TY+TI+K ++K W+ E M +G++P+ T+S LI+
Sbjct: 358 GTLQCIPSVVTYNTIIKALFESKSRISEISSWF-------ERMKGSGISPSPFTYSILID 410
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
E+AM L EEM + G P L+ A +A ++D A LF+
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQE-------- 462
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKA 524
L E+ ++ R+ + K + V + FD+ + P YN LM
Sbjct: 463 -LKENCGSSSARVYAVMIKHLGKAGRLDDAV-----NLFDEMNKLGCTPNVYAYNALMSG 516
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+AL M M+ G P+ S+ I+++ +G A+++L M++ + PD
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V+Y T + + ++A L +EM + +L+TY ++L A
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 194/489 (39%), Gaps = 55/489 (11%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V++ E ++++Q V P C+V ++ + +R G + + A+ +
Sbjct: 132 VEQYGEMWKMIQEMVRNP--------VCVVTPMEL--SDIIRMLGNAKMISKAVAIFYQI 181
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
K P ++I + G Y K +Y ++ ++ + F + +A F
Sbjct: 182 KVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG-----HCFPDTVTYSALISAF 236
Query: 308 --------TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
+ + M+ G+ Y +L+ N A ++ E++H +
Sbjct: 237 CKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRP-- 294
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DVFTY+ +++ A + A +M G P+T+ +++IN AG ++ A+
Sbjct: 295 --DVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVK 352
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEA----CQFDRAFRLFRSWTLSKTQVALGEDYDG- 474
LFEEM C P+ N +++A E+ + F + +S + DG
Sbjct: 353 LFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGF 412
Query: 475 -NTDRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
T+R +E D++ P S + K + + L + C +
Sbjct: 413 CKTNRTEKAMMLLEEMDEKGFPPCPA-AYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471
Query: 530 YRVKALM-----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
RV A+M +EM +G +PN ++ L+ +G ++ AL ++
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+E G PD+ +Y + ++ +A + MK I+P+ V+Y T+L A S G
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 633 SLHEVQQCL 641
E + +
Sbjct: 592 LFEEAAKLM 600
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 38/321 (11%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV---TPNTITWSSLINACANAGLVEQAM 418
D TY +++ + + K+ ++M+ V TP + S +I NA ++ +A+
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTP--MELSDIIRMLGNAKMISKAV 175
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+++ L+ +
Sbjct: 176 AIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELY--------------------NE 215
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD---------KRFSFKPTTTTYNILMKAC--CT 527
+SN H ++T + D K +PT Y +L+
Sbjct: 216 MSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLN 275
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + L EMR P+ ++T LI G +G + A MR +G PD V
Sbjct: 276 NVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVIN 335
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ RL A LFEEM Q P++VTY T+++A + S + + + ++ M
Sbjct: 336 NMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKA--LFESKSRISEISSWFERM 393
Query: 648 WKAGYKANDTYLKELIEEWCE 668
+G + LI+ +C+
Sbjct: 394 KGSGISPSPFTYSILIDGFCK 414
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVN 493
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ+ G + D+ SYNI+L
Sbjct: 494 LFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLA 553
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ +K + +K D +Y+T++ + A ++ A K+ ++M G
Sbjct: 554 KTGGPHRAMEMLSNMK----QSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFE 609
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 610 YDLITYSSILEA 621
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 171/412 (41%), Gaps = 79/412 (19%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA------- 376
+++YN+LL CC AG+ A +G L+ G K D Y+T++ + A
Sbjct: 64 LSTYNMLLSVCCNAGDMNGA---FGAFAALKRAG-FKPDCMIYTTLISTCSKALKTDLVF 119
Query: 377 ---------KWWQMAL-KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
W L +V +M S GV N +T+ ++I+ CA G + +A ++ ML
Sbjct: 120 QARNPGPILHWTNSVLAQVYREMESVGVEANLLTYGAIIDGCARTGELAKAFGIYRIMLS 179
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+P+ N L+ AC + RAF +F E K
Sbjct: 180 KKIKPDRVIFNSLINACGRSGAVKRAFEVF-------------------------TELKS 214
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRT 541
+ I PN V T L+ AC Y V +M + R
Sbjct: 215 ENPIN--PNHV-------------------TMCSLIDACSKAGDGDSAYEVYTMMRK-RG 252
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G P +T + AC SGN+E A I M++DG+ PD + ++ I V + ++
Sbjct: 253 IGGCPE--PYTAAVHACSSSGNLERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDC 310
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
AF + +E++ Y + P V + +L+ S G+ ++ + +Y+++ G + + + L
Sbjct: 311 AFDVLQEVEKYSLVPGPVIFSSLMGVCSNTGNW---EKAIFLYENIQAVGIRPSVSTLNA 367
Query: 662 LIEEWCEG-VIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENL 712
L+ C G Q+ Q+ E+ + +Q S+LLE + A NL
Sbjct: 368 LMTALCRGKQFQNALQSLEELKEAGVSPNQLTYSILLEACEKENEAGIALNL 419
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 194/455 (42%), Gaps = 58/455 (12%)
Query: 178 MEVLEEF-RLPVKELDEEF--RIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG-K 233
+EVLEE + ++++ + R Q C + V A RY ++ + N +
Sbjct: 17 LEVLEEMEKKGTLDMNKVYHARFYQECKRQLAVEEAFRYTGLIKSPTLSTYNMLLSVCCN 76
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL--RSQNVTLNI 291
D+ A A+ A K+ P+ I T+I C S+A+ DL +++N +
Sbjct: 77 AGDMNGAFGAFAALKRAGFKPDCMIYTTLISTC--------SKALKTDLVFQARNPGPIL 128
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ NS++ +VY+ M+ +GV A++ +Y ++ C G A IY
Sbjct: 129 HWTNSVL----------AQVYREMESVGVEANLLTYGAIIDGCARTGELAKAFGIY---- 174
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACAN 410
+ +K D +++++ + + A +V ++ S + PN +T SLI+AC+
Sbjct: 175 RIMLSKKIKPDRVIFNSLINACGRSGAVKRAFEVFTELKSENPINPNHVTMCSLIDACSK 234
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG + A ++ M + G + + AC + +RAF ++ + K V E
Sbjct: 235 AGDGDSAYEVYTMMRKRGIGGCPEPYTAAVHACSSSGNLERAFSIYDD--MKKDGVKPDE 292
Query: 471 -------DYDGNTDRISN----MEHKDKQSITNTPNFVPN-----SHYSSFDKRF----- 509
D G+ +I ++ +K S+ P + S+ +++K
Sbjct: 293 IFFSALIDVAGHASKIDCAFDVLQEVEKYSLVPGPVIFSSLMGVCSNTGNWEKAIFLYEN 352
Query: 510 ----SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGN 563
+P+ +T N LM A C AL + E++ G+SPN ++++IL++AC
Sbjct: 353 IQAVGIRPSVSTLNALMTALCRGKQFQNALQSLEELKEAGVSPNQLTYSILLEACEKENE 412
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
AL + DG+ P++ I +C+ R
Sbjct: 413 AGIALNLYTHAIADGIVPNLAMCDNIIGICLEGIR 447
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 531 RVKALMNEMRTVGL--SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
R A+ R GL SP ++ +L+ C +G++ GA ++ G PD + YTT
Sbjct: 45 RQLAVEEAFRYTGLIKSPTLSTYNMLLSVCCNAGDMNGAFGAFAALKRAGFKPDCMIYTT 104
Query: 589 AIKVCVRSKRLKQAF-----------------SLFEEMKHYQIQPNLVTYITLLRARSRY 631
I C ++ + F ++ EM+ ++ NL+TY ++ +R
Sbjct: 105 LISTCSKALKTDLVFQARNPGPILHWTNSVLAQVYREMESVGVEANLLTYGAIIDGCART 164
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
G E+ + +Y+ M K + LI
Sbjct: 165 G---ELAKAFGIYRIMLSKKIKPDRVIFNSLI 193
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 73/351 (20%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
++Y I +C ++ + D++ + V N++ ++LMNV LK L+V+
Sbjct: 135 DVYTYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVF------- 364
++MQ+ G++ ++ +YN L+ ++YG++ E A VL+ F
Sbjct: 195 EDMQRDGIVPNVVTYNTLI-------------DVYGKLGQWEQALQVLRRMKFQGIEPVT 241
Query: 365 -TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + WQ AL++ E+M +AG NT ++++LI+A + AG + Q + + +
Sbjct: 242 RTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQ 301
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+Q GCE + + L+ AC ++ ++ A R F
Sbjct: 302 MVQQGCERSVITYSSLISACEKSGEWQLALRFFDECL----------------------- 338
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
KD N PN T+N L+ AC + + + L M+
Sbjct: 339 -KD--------NCRPN---------------VITFNSLITACAQGAQWEKARELFELMQQ 374
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G +P+ +++T LI A G + ALQ + M+ G PD + Y I
Sbjct: 375 QGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDT 425
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 152/357 (42%), Gaps = 53/357 (14%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+AD+ +Y + C A A E+ +++ +GV + +V T+S ++ V +
Sbjct: 133 LADVYTYTAAISICVSAQQLERALELSADMQR---RGVQR-NVHTHSALMNVCIKCGQLK 188
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+AL V EDM G+ PN +T+++LI+ G EQA+ + M G EP ++ N L+
Sbjct: 189 LALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLM 248
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AC + Q+ A +L+ E + NT ++ N+
Sbjct: 249 IACNTSGQWQTALQLYE-------------------------EMRAAGHALNTTSY--NA 281
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
S+ K TY +++ C R+V I+++ LI AC
Sbjct: 282 LISAHSKAGDLPQVLDTYRQMVQQGCE------------RSV------ITYSSLISACEK 323
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
SG + AL+ +D P+V+ + + I C + + ++A LFE M+ P++VT
Sbjct: 324 SGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVT 383
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEGVIQDKNQ 676
Y L+ A R G + Q L +Q M G K + +I+ W G + Q
Sbjct: 384 YTALISAYERGG---KWQLALQAFQAMQAKGCKPDSIVYNAIIDTLWDTGCAWPQRQ 437
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+IDV G G + ++ + ++ Q + +N+LM + + L++
Sbjct: 204 PNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQL 263
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M+ G + SYN L+ A AG+ + Y + + +G + V TYS+++
Sbjct: 264 YEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTY---RQMVQQGCER-SVITYSSLIS 319
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ WQ+AL+ ++ L PN IT++SLI ACA E+A LFE M Q GC P
Sbjct: 320 ACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTP 379
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRS 458
+ L+ A ++ A + F++
Sbjct: 380 DVVTYTALISAYERGGKWQLALQAFQA 406
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP + + + +GK AL+ K P T++ C G + +
Sbjct: 202 IVPNV-VTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTA 260
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+YE++R+ LN +N+L++ + A DL L+ Y+ M + G + +Y+ L+ A
Sbjct: 261 LQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISA 320
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +G LA + E K + +V T+++++ A W+ A ++ E M G
Sbjct: 321 CEKSGEWQLALRFFDECL----KDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQG 376
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
TP+ +T+++LI+A G + A+ F+ M GC+P+S N ++
Sbjct: 377 CTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAII 423
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 45/442 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNIL 330
K+ I+ L+S+ V LN Y F +M + + + V++ +++ G+ ++ Y L
Sbjct: 142 KAWWIFNVLKSK-VVLNAYSF-GIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTL 199
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ CC G+ +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLG----LVPNQHTYSVLMNGFFKQGLQREGFQMYENMN 255
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 451 RAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +L LS V +G D + M+ T + N SS
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCD-VGKMD---------TAVRLFNQLKSS--- 362
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGS 561
PT TYN L+ Y +V+ L+ EM ++ + +++TILIDA
Sbjct: 363 --GLSPTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARL 416
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ A ++ +M + G+ PDV Y+ I + +K+A F+ + +QPN V Y
Sbjct: 417 NYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIY 476
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEV 681
T++ + GS + + L + +M +G N + C +D+ + E+
Sbjct: 477 NTMIHGYCKEGSSY---RALRLLNEMVHSGMVPNVASFCSTMGLLC----RDEKWKEAEL 529
Query: 682 TLCRRTNSQRPQSLLLEKVAVH 703
L + NS S+ L K+ VH
Sbjct: 530 LLGQMINSGLKPSVSLYKM-VH 550
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 172/377 (45%), Gaps = 28/377 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM + G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + G ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + +++++V Y D + + + DK
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT----YTILIDAFARLNYTDK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG---L 544
S ++ P TY++L+ C + +K +++G L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLIHGXCVN-GNMKEASKPFKSLGEMHL 469
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN + + +I G+ AL++L M GM P+V ++ + + + R ++ K+A
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAEL 529
Query: 605 LFEEMKHYQIQPNLVTY 621
L +M + ++P++ Y
Sbjct: 530 LLGQMINSGLKPSVSLY 546
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 118/291 (40%), Gaps = 28/291 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y IV + + AL M+ G P + T+++L+ + ++A +F +L
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN-VL 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ N+ I++ C EA F R FRL + LS V DG M
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------------------PTTTTYNILM 522
K+ + VPN H S FK P YN L+
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGM 579
C D KA + EMR G++ +++ ILI C G E A++++ + + G+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE-AVKLVHKVNKVGL 329
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
SP++V Y I ++ A LF ++K + P LVTY TL+ S+
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 501 HYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
H S D+ +F P + T+N L+ Y KA + N +++ + N
Sbjct: 101 HSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS-KVVLNAY 159
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ I+I C +G ++L ++ E G+SP+VV YTT I C ++ + A +LF +M
Sbjct: 160 SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ PN TY L+ + G E Q +Y++M ++G N LI E+C
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQ---MYENMNRSGIVPNAYAYNCLISEYCND 276
Query: 670 VIQDK 674
+ DK
Sbjct: 277 GMVDK 281
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 29/381 (7%)
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VF++L +V + F L+ + M++ V S N LL G T + +
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFF--- 121
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + G K VFTY+ ++ + A + E+M G+ P+T+T++S+I+
Sbjct: 122 KDMIGAGS-KPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G ++ ++ FEEM CEP+ N L+ + + + FR S + +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV-V 239
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC---- 526
Y D E +Q++ + +R P TY L+ A C
Sbjct: 240 SYSTLVDAFCK-EDMMQQALKFYVDM----------RRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 527 -TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+D +R L +EM VG+ N +++T LID ++ A ++ M G+ P++ +
Sbjct: 289 LSDAFR---LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLAS 345
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I V++K + +A L +EMK I+P+L+ Y T + + L +++ V
Sbjct: 346 YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC---GLEKIEAAKVVMN 402
Query: 646 DMWKAGYKANDTYLKELIEEW 666
+M + G KAN L++ +
Sbjct: 403 EMQEKGIKANTFIYTTLMDAY 423
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 175/452 (38%), Gaps = 75/452 (16%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P ++ +ID GD + ++E+++ + + + +NS+++ L T+
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G E + E+K + LK +V +YST+
Sbjct: 189 YFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK----QSGLKPNVVSYSTL 244
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q ALK DM G+ PN T++SL++A G + A L +EM Q G
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNTDRISN 481
E N L+ + + A LF S T + G N DR
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA-- 362
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
+E D+ K KP Y + + C K +MNEM
Sbjct: 363 LELLDEM------------------KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEM 404
Query: 540 RTVGLSPNHISWTILIDACGGSGN-----------------------------------V 564
+ G+ N +T L+DA S N V
Sbjct: 405 QEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLV 464
Query: 565 EGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
A+ +I + G+ + YT I + +++ A +LFE+M + P+ Y +
Sbjct: 465 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTS 524
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
L+ + + G+ V Q LA+ M + G ++
Sbjct: 525 LIDGKLKQGN---VVQALALRDKMAEIGVESG 553
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KPT TYNI++ C D L EM+ GL P+ +++ +ID G G ++ +
Sbjct: 130 KPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVY 189
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M+ PDV+ Y T I + +L + F EMK ++PN+V+Y TL+ A
Sbjct: 190 FFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFC 249
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + QQ L Y DM + G N+ L++ +C+
Sbjct: 250 KEDMM---QQALKFYVDMRRLGLVPNEHTYTSLVDAYCK 285
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 176/416 (42%), Gaps = 42/416 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++S + ++
Sbjct: 145 KEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE ++ M++ G+ ++ SY+ L+ A C A + Y ++
Sbjct: 205 TYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDM 264
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L L + TY+++V + A ++ ++M GV N +T+++LI+ +
Sbjct: 265 RRLG----LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCD 320
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
+++A LF +M+ AG PN L+ V+A DRA L
Sbjct: 321 VERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLL 380
Query: 459 -----WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
W+L E + ++ M+ K ++ T + ++++ S +
Sbjct: 381 YGTFIWSLCGL-----EKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHL 435
Query: 514 -----------TTTTYNILMKACCTDYYRVKALMNEMR---TVGLSPNHISWTILIDACG 559
T T+ +L+ C + KA+ R GL N +T +ID
Sbjct: 436 LEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLC 495
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
VE A + + M + G+ PD AYT+ I ++ + QA +L ++M ++
Sbjct: 496 KEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+K +M G P ++ I+ID G++E A + + M+ G+ PD V Y + I
Sbjct: 117 MKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMID 176
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ RL FEEMK +P+++TY TL+ ++G L + L +++M ++G
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKL---PKGLEFFREMKQSG 233
Query: 652 YKANDTYLKELIEEWCE 668
K N L++ +C+
Sbjct: 234 LKPNVVSYSTLVDAFCK 250
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 117/309 (37%), Gaps = 60/309 (19%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ + V + ++ AL+ M V P T + + L++ A G + F++M+
Sbjct: 66 FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG +P NI++ + + A LF
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR----------------------- 162
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEM 539
P T TYN ++ Y +V L EM
Sbjct: 163 ------------------------GLIPDTVTYNSMIDG----YGKVGRLDDTVYFFEEM 194
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+++ P+ I++ LI+ G + L+ + M++ G+ P+VV+Y+T + + +
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+QA + +M+ + PN TY +L+ A + G+L + + +M + G + N
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDA---FRLADEMSQVGVEWNVVTY 311
Query: 660 KELIEEWCE 668
LI+ C+
Sbjct: 312 TALIDGLCD 320
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+++ ++P + + + + +GK L + ++ K P++ T+I+ G
Sbjct: 159 MKFRGLIPDT-VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFG 217
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYN 328
K + +++ + N+ +++L++ + ++ L+ Y +M++LG++ + +Y
Sbjct: 218 KLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYT 277
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ A C GN A + E+ + GV + +V TY+ ++ D + + A ++
Sbjct: 278 SLVDAYCKIGNLSDAFRLADEMSQV---GV-EWNVVTYTALIDGLCDVERIKEAEELFGK 333
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
M++AGV PN ++++LI+ A +++A+ L +EM G +P+
Sbjct: 334 MVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPD 377
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V F K+ + AL+ Y ++ PN + +++D G+ + + ++
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V N+ + +L++ + +K E++ M GV+ ++ASY L+ A N
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+ E+K +G+ K D+ Y T + + + A V +M G+ NT
Sbjct: 359 MDRALELLDEMK---GRGI-KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTF 414
Query: 400 TWSSLINA 407
+++L++A
Sbjct: 415 IYTTLMDA 422
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 94/214 (43%), Gaps = 7/214 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDL 282
+ + F K +++ AL D K P++ + T I +CG+ ++ + ++
Sbjct: 346 YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGL-EKIEAAKVVMNEM 404
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + N +++ +LM+ + + L + + M +L + ++ +L+ C
Sbjct: 405 QEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLV 464
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A + +G + + L+ + Y+ ++ + A + E M G+ P+
Sbjct: 465 SKAIDYFGRISNDFG---LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTA 521
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++SLI+ G V QA+ L ++M + G E ++
Sbjct: 522 YTSLIDGKLKQGNVVQALALRDKMAEIGVESGAR 555
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 144/333 (43%), Gaps = 33/333 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K+D F T D + A KV M G PN ++ ++L+ A G A
Sbjct: 136 KMDFFMLITAYGKLGD---FNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAEA 192
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-------- 471
+F M + G EP++ I+L+ V+ +F A LF + L+ L D
Sbjct: 193 IFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDN-LLNDENSPLKPDQKMFNMMI 251
Query: 472 --------YDGNTDRISNMEHKDKQSITNTPN----FVPNSHYSS--FDK--RFSFKPTT 515
Y+ + M Q T T N F N S +D+ R +P
Sbjct: 252 YMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNYKEVSNIYDQMQRADLRPDV 311
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+Y +L+ A +AL EM G+ P ++ IL+DA SG VE A + K
Sbjct: 312 VSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKS 371
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR D PD+ +YTT + + + ++ A F+ + +PN+VTY TL++ Y
Sbjct: 372 MRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKG---YAK 428
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+++++ + Y++M G KAN T L +++ +
Sbjct: 429 INDLEMVMKKYEEMLMRGIKANQTILTTIMDAY 461
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 161/375 (42%), Gaps = 38/375 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +GK D A + K+ +PN+ +++ G G Y + AI+ ++
Sbjct: 139 FFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQ 198
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMASYNILLKACCLAG 338
+ + + ++ V + + E++ N+ + + D +N+++ AG
Sbjct: 199 KWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAG 258
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A++ + ++ L G+ + V TY++++ + ++ + + M A + P+
Sbjct: 259 SYEKARKTFAQMAEL---GIQQTTV-TYNSLMSFETN---YKEVSNIYDQMQRADLRPDV 311
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++ L++A A E+A+ +FEEML AG P + NILL A + ++A +F+S
Sbjct: 312 VSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKS 371
Query: 459 WTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ + + Y N D + E K+ I + F+
Sbjct: 372 MRRDRYFPDLCSYTTMLSAYI-NADDMEGAEKFFKRLIQD-----------------GFE 413
Query: 513 PTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L+K A D V EM G+ N T ++DA G SG+ + A+
Sbjct: 414 PNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHW 473
Query: 571 LKIMREDGMSPDVVA 585
K M +G+ PD A
Sbjct: 474 FKEMESNGIPPDQKA 488
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
YD ++ P++ ++ G ++ A++E++ + +N L++ A
Sbjct: 299 YDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLD--AF 356
Query: 304 DLKFTLE----VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
+ +E V+K+M++ D+ SY +L A A + A++ + K L G
Sbjct: 357 SISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFF---KRLIQDG-F 412
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ +V TY T++K +A +M +K E+ML G+ N +++++A +G + A+H
Sbjct: 413 EPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVH 472
Query: 420 LFEEMLQAGCEPNSQCCNILL 440
F+EM G P+ + N+LL
Sbjct: 473 WFKEMESNGIPPDQKAKNVLL 493
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 182/437 (41%), Gaps = 68/437 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D ++ + + K +D A + K+ P + I+D G+C G + +
Sbjct: 45 DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD--GLCKAGRTKDAVKL 102
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+++R + + NIY +N ++ + K E K ++++ G D+ +YN +K C
Sbjct: 103 LDEMRDKGCSPNIYTYNVIVEGLCEERKLD-EAKKMLEEMAVRGYFPDVVTYNSFIKGLC 161
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E + A+ + DV +Y+T++ + A ++ + M + G T
Sbjct: 162 KCDRV-------DEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+SSLI+ G VE+AM L + ML+ GC PN N LL A L
Sbjct: 215 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA------------L 262
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R + K + D + ME R F P
Sbjct: 263 HRLGHIGKAE-----------DMLVEME------------------------RRGFTPDV 287
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+YN + C + KA+ + M G +PN S+++L++ ++ A+ +++
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYG 632
RE D++ YT + + R +A +LF ++ +I +P++ Y +L + +
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR- 406
Query: 633 SLHEVQQCLAVYQDMWK 649
++ + L +++ M +
Sbjct: 407 --RQIDKALQIHKQMLE 421
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 24/348 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D ++ ILL+ C + A+++ G +K + G + D Y+ ++ ++ AK + A
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEM---GCVPDDAI-YNALISGYSKAKDFGQA 64
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K +M+ P +T++++++ AG + A+ L +EM GC PN N++++
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
E + D A ++ + + Y+ + + D+
Sbjct: 125 LCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDRVDEAR------------- 170
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F R P +Y ++ C D ++++M G +P+ ++++ LID
Sbjct: 171 -KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCK 229
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G VE A+ +L M + G P++VAY + + R + +A + EM+ P++V+
Sbjct: 230 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 289
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
Y + + V++ AV+ M + G N + L+EE C+
Sbjct: 290 YNACIDGLCK---AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 181/445 (40%), Gaps = 45/445 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
+ + N V K A++ D + SPN+Y I++ G+C + +++ +
Sbjct: 81 VTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE--GLCEERKLDEAKKML 138
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E++ + ++ +NS + E K + ++ V D+ SY ++ C +G+
Sbjct: 139 EEMAVRGYFPDVVTYNSFIK-GLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD 197
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + + + +G DV TYS+++ F + A+ + + ML G PN +
Sbjct: 198 LDSASRM---LDQMTNRGCTP-DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
++SL+ A G + +A + EM + G P+ N + +A + +A +F
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313
Query: 457 ---------RSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNT-------PNFVPN 499
S+++ ++ ++ D D I+ +E ++K I +
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELD---DAITLVEQAREKYQIVDILLYTVLLDGLCKG 370
Query: 500 SHYSSFDKRFS-------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP-NHISW 551
+ FS +P YN+++ + C KAL + + + N ++W
Sbjct: 371 GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTW 430
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
IL+ + A +L M ++G PD V Y T + + + A LFEE
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Query: 612 YQIQPNLVTYITLLRARSRYGSLHE 636
P++VTY L+ G +HE
Sbjct: 491 GGCVPDVVTYSALIT-----GLVHE 510
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ IL+ S +E A Q+L M+E G PD Y I ++K QAF
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
EM P +VTY ++ + G + + L +M G N ++E
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLL---DEMRDKGCSPNIYTYNVIVEG 124
Query: 666 WCE 668
CE
Sbjct: 125 LCE 127
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 135/340 (39%), Gaps = 57/340 (16%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K++A+++ + + T N ++ L+ +L + + + ++ + D+ Y +LL
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML- 390
C G A ++ +V L+ K + + DVF Y+ ++ + AL++ + ML
Sbjct: 365 DGLCKGGRFDEACALFSKV--LDEK-ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421
Query: 391 ---------------------------------SAGVTPNTITWSSLINACANAGLVEQA 417
G P+ +T+ +L++A G A
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 481
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK-TQVALGEDYDGNT 476
+ LFEE ++ GC P+ + L+ V + A+ LF ++ + LG +G+
Sbjct: 482 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSG 541
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
D + + +S + PN+ +F K S K L+KA + + L
Sbjct: 542 DLGLKLFVELIES-----DVEPNAR--TFGKEISGK--------LVKA--ESLGKARGLF 584
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ G P+ LID G++E A +I M++
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/241 (17%), Positives = 108/241 (44%), Gaps = 40/241 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
V E KK++L A+ + +++ ++ + ++D G+C G + ++ A++ +
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLD--GLCKGGRFDEACALFSKVLD 385
Query: 285 QNVT-LNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +++ +N +++ + + L+++K M + ++ ++NIL+ C+
Sbjct: 386 EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLS 444
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + + +G + D TY T+V AL++ E+ + G P+ +T+
Sbjct: 445 DAETM---LLTMVDEGFIP-DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 500
Query: 402 SSLINACANAGLVEQA----------------------------MHLFEEMLQAGCEPNS 433
S+LI + + E+A + LF E++++ EPN+
Sbjct: 501 SALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560
Query: 434 Q 434
+
Sbjct: 561 R 561
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 163/392 (41%), Gaps = 59/392 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN I T++ G+C G+ KS ++ + +Q +N + +L+N + + +
Sbjct: 200 PNTIILTTLMK--GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + ++ D+ YN ++ C L E Y + ++G+ DV TYST+
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLC---KDKLVNEAYDFYTEMNSRGIFP-DVITYSTL 313
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A A + +M + P+ T++ LI+A G +++A +L M + G
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN + L+ + A ++F + +T+V
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV--QTEV----------------------- 408
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
P+ +YNI++ C +A L+ EM + PN
Sbjct: 409 ----------------------NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LID SG + AL ++K + G DV+ YT+ + +++ L +A +LF
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+MK IQPN TY L+ + L Q+
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 37/353 (10%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E KG+ + D+ T S ++ F + V +L G PNTI ++L+
Sbjct: 156 KQMEVKGI-EPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCL 214
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VA 467
G V++++H ++++ G + N LL + + A +L R T+ V
Sbjct: 215 KGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVM 274
Query: 468 LGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF---------------- 509
DG D++ N E D + N+ P+ YS+ F
Sbjct: 275 YNTIIDGLCKDKLVN-EAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEM 333
Query: 510 ---SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TY IL+ A C + K L+ M G+ PN ++++ L+D G V
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A QI M + ++P V +Y I + K + +A +L EM H + PN VTY +L
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ + G + L + +++ G A+ L++ C KNQN
Sbjct: 454 IDGLCKSG---RITSALDLMKELHHRGQPADVITYTSLLDGLC------KNQN 497
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 20/321 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ Y M G+ D+ +Y+ L+ CLAG + A + E + K + DV+TY+ +
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE---MTLKNI-NPDVYTYTIL 348
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A + M GV PN +T+S+L++ G V A +F M+Q
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ NI++ + D A L R L K V Y+ D +
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLREM-LHKNVVPNTVTYNSLIDGLCK-----SGR 462
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
IT+ + + H+ +P TY L+ C + + AL +M+ G+ P
Sbjct: 463 ITSALDLMKELHHRG-------QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQP 515
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LID ++ A ++ + + G DV Y I + L +A ++
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
+M+ P+ VT+ ++R+
Sbjct: 576 SKMEDNGCIPDAVTFEIIIRS 596
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 62/399 (15%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGIC--GDYM 273
R D++ N + + K LV+ AYD + S P++ T+I CG C G M
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVN--EAYDFYTEMNSRGIFPDVITYSTLI--CGFCLAGQLM 324
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
+ ++ ++ +N+ ++Y + L++ + LK + M K GV ++ +Y+ L+
Sbjct: 325 GAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
CL G A++I+ H + + V +Y+ ++ K A+ + +ML
Sbjct: 385 DGYCLVGEVHNAKQIF----HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V PNT+T++SLI+ +G + A+ L +E+ G + LL + D+
Sbjct: 441 KNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A LF M+ K++ N + + K
Sbjct: 501 AIALF-------------------------MKMKERGIQPN--KYTYTALIDGLCKGARL 533
Query: 512 KPTTTTY-NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
K + +IL+K CC D Y ++ ++I G ++ AL +
Sbjct: 534 KNAQKLFQHILVKGCCIDVY-------------------TYNVMIGGLCKEGMLDEALAM 574
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M ++G PD V + I+ +A L EM
Sbjct: 575 KSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 32/310 (10%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ I + ++ + A+ L ++M G EP+ +IL+ Q +F
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 455 L--------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK------QSITNTPNFVPNS 500
+ ++ T+ T + G G + ++ DK Q + + N
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKK--SLHFHDKVVAQGFQMNQVSYGTLLNG 246
Query: 501 HYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ R + K P YN ++ C D +A EM + G+ P+
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ LI +G + GA +L M ++PDV YT I + +LK+A +L
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
M ++PN+VTY TL+ G +H +Q ++ M + + +I C
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQ---IFHAMVQTEVNPSVCSYNIMINGLC 423
Query: 668 EGVIQDKNQN 677
+G D+ N
Sbjct: 424 KGKSVDEAMN 433
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN ++ID G+C G + + ++L + ++ + SL++ +L +
Sbjct: 445 PNTVTYNSLID--GLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI 502
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G+ + +Y L+ C AQ+++ +H+ KG +DV+TY+ +
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLF---QHILVKGCC-IDVYTYNVM 558
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ AL +K M G P+ +T+ +I + ++A L EM+ G
Sbjct: 559 IGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 101/256 (39%), Gaps = 22/256 (8%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC----------CNILL 440
+ G+ PN +T S LIN + G + + + ++L+ G +PNS C I L
Sbjct: 4 AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKL 63
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+E DR+ R + S + H SI + V +
Sbjct: 64 PRMIE----DRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHD----VVHD 115
Query: 501 HYSSFDKRFSFK--PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
S F+ + P+ + ++ + + +L +M G+ P+ ++ +ILI+
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + + +L + + G P+ + TT +K +K++ +++ Q
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235
Query: 617 NLVTYITLLRARSRYG 632
N V+Y TLL + G
Sbjct: 236 NQVSYGTLLNGLCKIG 251
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 78/372 (20%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-- 349
+V ++L+ N ++ VY++M++ G ++ +YN+LLKA C A+++ E
Sbjct: 150 HVLDTLLGEN--RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 207
Query: 350 --------------VKHLEAKGVLKLD----------VFTYSTIVKVFADAKWWQMALKV 385
+ + G++K V Y+ ++ + ++ +++
Sbjct: 208 NKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVEL 267
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-V 444
+M+ G++PN I++S+LIN +N+G +E A L +ML+ GC PN + L++ C V
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
FD AL ++
Sbjct: 328 RGTTFD----------------AL-------------------------------DMWNQ 340
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ F +P YN L++ C+ + + ++ M +G SPN ++ LI+ G
Sbjct: 341 MIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRG 400
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++EGA+ I M G P+VV YT+ ++ R + K+A SL E M P++ T+
Sbjct: 401 SLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 460
Query: 623 TLLRARSRYGSL 634
++ G L
Sbjct: 461 AFIKGLCDAGRL 472
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 39/386 (10%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + ++ + ++ N+ +++L+N N+ ++ + M K G
Sbjct: 254 GLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHP 313
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C + G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 314 NIHTLSSLVKGCFVRGTTFDALDMWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIDKA 370
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN G +E A++++ +ML +GC PN +++A
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 431 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRC 488
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +T+TYN L+ C AL
Sbjct: 489 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQ 548
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A+Q+L ++ PDV++YT I
Sbjct: 549 LVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWG 608
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNL 618
RS + LFE M +I P L
Sbjct: 609 LCRSNCREDGVILFERMISERIIPIL 634
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 174/451 (38%), Gaps = 53/451 (11%)
Query: 273 MKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNIL 330
+K A+ + LR ++ V L ++ F S+ N N T EV ++KL + + S L
Sbjct: 40 IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVM--IRKLAMDGQVDSVQYL 97
Query: 331 LKACCLAG----------------NTVLAQ---EIYGEVKHLEAKGVLKLDVFTYSTIVK 371
L+ L G LA+ E++ +K +K+ Y+ ++
Sbjct: 98 LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKI----YNHVLD 153
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
QM V DM G PN T++ L+ A V+ A L EM GC P
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213
Query: 432 NSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALG----EDYDGNTDRISNMEH 484
N+ ++ + E +L F + G DY G + +S M
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVK 533
K + + + N +S +F P T + L+K C
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333
Query: 534 AL--MNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
AL N+M R GL PN +++ L+ GN++ A+ + M E G SP++ Y + I
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY-QDMWK 649
+ L+ A ++ +M PN+V Y +++ A R+ E + + + ++
Sbjct: 394 NGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCA 453
Query: 650 AGYKANDTYLKELIE----EWCEGVIQDKNQ 676
+ ++K L + +W E V + Q
Sbjct: 454 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 484
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 11/198 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T++ G C G+ K+ +++ + + NI + SL+N L+ +
Sbjct: 349 PNVVAYNTLVQ--GFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 407 YIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 462
Query: 370 VKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522
Query: 429 CEPNSQCCNILLQACVEA 446
E ++ N LL A
Sbjct: 523 VEWSTSTYNTLLHGSCNA 540
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 151/360 (41%), Gaps = 53/360 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV+ + N ++K C A+ I V+ + G+ D+FTYS I+
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI---VQKMVDSGIAP-DLFTYSLII 287
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+K A +V E M+ AG PN+IT++SLI+ + +G+ +++ +F++M G
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 347
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P CN + A + + + A +F S L +
Sbjct: 348 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK------------------------- 382
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P+ + S+ Y +C D V + N M T G++PN
Sbjct: 383 ---PDII------------SYSTMLHGYATATDSCLAD---VHNIFNLMLTKGIAPNKHV 424
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILI+A G ++ A+ I + M+ GM PD V + T I R RL A F M
Sbjct: 425 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 484
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKANDTYLKELIEEWCE 668
+ P+ Y L++ +G L + ++ ++ + +D+ G K Y +I C+
Sbjct: 485 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK----YFSSIINNLCK 540
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 166/415 (40%), Gaps = 57/415 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN ++ +I+ CG K+ I+ED++++ + + F ++++ L L
Sbjct: 419 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 478
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M +GV A Y L++ CC G V A+E+ E+ + K + V +S+I+
Sbjct: 479 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN---KDIPPPGVKYFSSII 535
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + M+ G PN +T++SL+ G +E+A L + M G E
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 595
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A +FR +M HK
Sbjct: 596 PNCYIYGTLVDGYCKNGRIDDALTVFR-----------------------DMLHK----- 627
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
KPT+ Y+I++ K + +EM G + +
Sbjct: 628 -------------------GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 668
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +++ + + A +L+ + + D++ + I + R ++A LF+
Sbjct: 669 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 728
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ Y + PN+ TY ++ + S E ++ + K+G+ ++ L ++
Sbjct: 729 ISTYGLVPNIQTYSMMITNLIKEESYEEADN---LFISVEKSGHASDSRLLNHIV 780
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 513 PTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYNIL+ Y RV A++ + GL P+ S++ LI G V+
Sbjct: 174 PTIHTYNILIDC----YRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 228
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E G+ P ++ + IK + K + +A S+ ++M I P+L TY ++
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ ++ + ++ L + M +AG + N LI +
Sbjct: 289 GLCKSKAMDKAERVL---EQMVEAGTRPNSITYNSLIHGY 325
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM G+ P + +I ++ A I++ M + G++PD+ Y+ I
Sbjct: 228 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 287
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+SK + +A + E+M +PN +TY +L+ S G +E + V++ M
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE---SVRVFKQMSSC 344
Query: 651 G 651
G
Sbjct: 345 G 345
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN YI T++D G C G + ++ D+ + V +++ +++ A
Sbjct: 596 PNCYIYGTLVD--GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M + G + +Y ++L C T A + ++ L A V K D+ T++ +
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML---LEKLFAMNV-KFDIITFNIV 709
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ Q A ++ + + + G+ PN T+S +I E+A +LF + ++G
Sbjct: 710 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769
Query: 430 EPNSQCCNILLQACVEACQFDRA 452
+S+ N +++ + + +A
Sbjct: 770 ASDSRLLNHIVRMLLNKAEVAKA 792
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 29/299 (9%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LDV +Y+T++K AD+K A ++ E++ +AG +PN + ++++I+ AG +E +
Sbjct: 106 LDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 165
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FEEM + C P +++ +A A ++F + K V Y D S
Sbjct: 166 FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM-VQKGCVPDTITYTTLIDGFS 224
Query: 481 NMEHKDKQS------ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYY-RV 532
D+ +T P +PT TY ++ C D
Sbjct: 225 KASKMDEARKLLDVMLTKGP-----------------EPTAVTYGSIVHGFCKLDMINEA 267
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K ++ +MR G P +T L+ G E A Q+L M G +PDV+ YT+ I +
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 327
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R+ +A +F+ M P+ +TY T+++ S+ G++ + L + M K+G
Sbjct: 328 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL---MAKSG 383
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 173/427 (40%), Gaps = 61/427 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
I + + F K + A + D P +I+ G C M +++ +
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH--GFCKLDMINEAKEVI 271
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R + +++F SL++ ++ + +V M G D+ Y L+
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 331
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + KG D TY TI++ F+ + A ++ E M +GV P+
Sbjct: 332 GRVPEARHVF---DSMIEKGCAP-DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++SL++ V+QA +++ M+ +G +PN+ N+L+ + + DRAF LF+
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L K +V PT +
Sbjct: 448 EM-LEKEEVP---------------------------------------------PTLVS 461
Query: 518 YNILMKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ +A + EM G+ P ++T LI + +G + A ++++ M
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL---LRARSRYG 632
+ G++PDV AY+ I + S + A+ +F+EM PN VTY L RA R
Sbjct: 522 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 581
Query: 633 SLHEVQQ 639
L V+Q
Sbjct: 582 DLEAVKQ 588
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 198/479 (41%), Gaps = 60/479 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+L++ + N+ + ++++ + A ++ L+ ++ M + +Y +++ C
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A +++ + + KG + D TY+T++ F+ A A K+ + ML+ G
Sbjct: 190 KAQMLPDACKVF---EQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+ S+++ ++ +A + +M + GCEP LL + + + A+++
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 456 FRSWTLS--KTQVALGE---DYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF 509
T V L D +T R+ H I P++ Y + + F
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNF 363
Query: 510 S-------------------FKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGL 544
S P YN LM Y +++ + + M G+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG----YVKLERVDQAFGVYDRMVASGI 419
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ +L+ G + A + K M E + + P +V+YT I ++ R+ +AF
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
F+EM I P TY +L+ + ++ G + E ++ + +DM K G + LI
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV---EDMVKLGVNPDVQAYSALI 536
Query: 664 EEWCEGVIQD-----------KNQNQGEVT--LCRRTNSQRPQSLLLEKVAVHLQKSAA 709
+ + D + EVT + RR ++L LE V H + A
Sbjct: 537 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVA 595
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 113/299 (37%), Gaps = 64/299 (21%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P ++++++I+ A+ +++A F M+ GCEP+ L+ +A Q
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+L Q++ KRF +
Sbjct: 62 HKLL------------------------------NQAL----------------KRF--R 73
Query: 513 PTTTTYNILMKACC------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P Y ++ C T Y+R T S + IS+T +I S ++
Sbjct: 74 PDVFLYTSVIHGYCKAGDLDTGYFRAV-------TPKASLDVISYTTVIKGLADSKRIDE 126
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ + ++ G SP+VVAYT I +++ R++ FEEM P TY ++
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVID 186
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCR 685
+ L + + V++ M + G + LI+ + + D+ + +V L +
Sbjct: 187 GLCKAQMLPDACK---VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
>gi|110288710|gb|AAP52447.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215694798|dbj|BAG89989.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 735
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 107 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 160
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 161 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 221 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 277
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 278 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 336
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 337 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 396
Query: 620 TYITLLRA 627
L+ A
Sbjct: 397 MMNALITA 404
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 50 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 109
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 110 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 169
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 170 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 229
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 230 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 290 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 350 DARAKGYQVG-----------------------------------------------TIA 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 363 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 423 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 474
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 104 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 163
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 164 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 665 EWCE 668
E
Sbjct: 221 ACGE 224
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 134 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 193
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 194 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 253
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 254 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 313
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 314 EDMNKIGVQPDEMFLSALVD 333
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 273 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 327 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 386
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 387 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 442
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 443 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 499
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 105 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 164
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 165 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 224
Query: 631 YGSL 634
G++
Sbjct: 225 SGAV 228
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 180/415 (43%), Gaps = 29/415 (6%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
D++ A +D + P + ++ Y + ++Y +R ++ +++ N
Sbjct: 70 DVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLN 129
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC---CLAGNTVLAQEIYGEV 350
L N N + + L + + G + D+ +YN L+K C G+ A+EI+ E+
Sbjct: 130 ILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM 189
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K A+G++ +V +YS++V F A + + ++ +M+ GV PN + ++ LI+
Sbjct: 190 K---AQGMIP-NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCK 245
Query: 411 AGLV---EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A LF M GCE N IL+ + + + A L+ QV
Sbjct: 246 EGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP----QVG 301
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ + ++ + K N V + S D + Y I + C
Sbjct: 302 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVD--------SCIYVIFLDGLCK 353
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + L NE+++ + S++ LID +G VE A + K + ++G+ P+VV
Sbjct: 354 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 413
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYGSLHEV 637
I R +++ +A LFE+M+ + P+++TY TLLR L EV
Sbjct: 414 CNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 468
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 159/383 (41%), Gaps = 64/383 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ L +N + F+L Y M+ G+ D+ + NIL C N E +
Sbjct: 96 LLGGLAKINHYSQLFSL--YNKMRLAGLSPDLFTLNILANCLC---NLNRVSEGLAAMTG 150
Query: 353 LEAKGVLKLDVFTYSTIVK-VFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACA 409
+ +G + D+ TY+T++K ++ K A ++ E+M + G+ PN I++SSL++
Sbjct: 151 ILRRGYIP-DIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFC 209
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA--CQFDRAFRLFRSWTLSKTQV 466
AG +E++ LF EM+ G +PN N+L+ C E A +LF S SK
Sbjct: 210 CAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMP-SK--- 265
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
EH + +Y IL+ C
Sbjct: 266 --------------GCEHNE-----------------------------ISYTILINGYC 282
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A L NEM VG PN +++ L+ +G V A ++ +M+ G+S D
Sbjct: 283 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 342
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + ++ L +A LF E+K Y + + +Y L+ + G +V+ +
Sbjct: 343 IYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAG---KVEIAWEFF 399
Query: 645 QDMWKAGYKANDTYLKELIEEWC 667
+ + + G + N +I +C
Sbjct: 400 KQLSQEGLQPNVVTCNIMIHGFC 422
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 113/318 (35%), Gaps = 58/318 (18%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC---ANAGLVE 415
L D+FT + + + L +L G P+ +T+++LI G +
Sbjct: 121 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHED 180
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A +FEEM G PN + L+ A + + + RLF Q
Sbjct: 181 EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQ---------- 230
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYY 530
P +N+L+ C D
Sbjct: 231 -------------------------------------PNLVQFNVLIDILCKEGKIGDLS 253
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L M + G N IS+TILI+ VE A+ + M + G P+V Y+T +
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 313
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++ ++ A LF MK I + Y+ L + G L E + ++ ++
Sbjct: 314 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME---LFNELKSY 370
Query: 651 GYKANDTYLKELIEEWCE 668
+K + LI+ C+
Sbjct: 371 NFKLDFESYSRLIDGLCK 388
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 500 SHYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHIS 550
+HYS ++ P T NIL C + RV A M + G P+ ++
Sbjct: 104 NHYSQLFSLYNKMRLAGLSPDLFTLNILANCLC-NLNRVSEGLAAMTGILRRGYIPDIVT 162
Query: 551 WTILIDACGG---SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ LI G G+ + A +I + M+ GM P+V++Y++ + + +L+++ LF
Sbjct: 163 YNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFN 222
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM +QPNLV + L+ + G + ++ ++ M G + N+ LI +C
Sbjct: 223 EMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 282
Query: 668 E 668
+
Sbjct: 283 K 283
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC---GICGDY 272
++P I + + V F L + R ++ PN+ +ID+ G GD
Sbjct: 194 MIPNV-ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDL 252
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
+R ++ + S+ N + L+N K + +Y M ++G ++ +Y+ L
Sbjct: 253 SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTL 312
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L G A +++G +K A G+ +D Y + A+++ ++
Sbjct: 313 LTGLLQTGKVGDANKLFGVMK---ASGI-SVDSCIYVIFLDGLCKNGVLFEAMELFNELK 368
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S + ++S LI+ AG VE A F+++ Q G +PN CNI++ Q D
Sbjct: 369 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 428
Query: 451 RAFRLF 456
+A LF
Sbjct: 429 KANILF 434
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ ++ D SY+ L+ C AG +A E + K L +G L+ +V T +
Sbjct: 361 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF---KQLSQEG-LQPNVVTCNI 416
Query: 369 IVKVFADAKWWQMA---LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ F + A + E M G TP+ IT+++L+ + +E+ ++L +M
Sbjct: 417 MIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 476
Query: 426 Q 426
+
Sbjct: 477 K 477
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 30/367 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +++++ Q ++ N +N L++ ++ K + +++ M + GV D+ +Y
Sbjct: 220 GQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTY 279
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G ++ A++++ + K K D Y T++ +A + ++ +
Sbjct: 280 NTLMVYLCKNGRSMEARKVFDSM----VKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M+ G P+ ++ LI A A G+V++AM F +M Q G PN ++ A
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395
Query: 448 QFDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A F S L+ V G D+ E + I
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR---------- 445
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T +N L+ C + R K + + M V + + I++T LID
Sbjct: 446 -------GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCL 498
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A ++L+ M DG+ P+ V Y T I ++ R++ A SLF +M + P +V
Sbjct: 499 DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVI 558
Query: 621 YITLLRA 627
Y T+L
Sbjct: 559 YSTILHG 565
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 166/403 (41%), Gaps = 61/403 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILL 331
R I +Q +T F+ L+ HD + + + + M LG + SYNILL
Sbjct: 120 GRVIRTGWTAQAIT-----FSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILL 174
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K C + A + + + +G DV +Y+T++ A + ++ML
Sbjct: 175 KGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLD 234
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G++PN IT++ L++ ++G ++A+ +F +M + G EP+ N L+ V C+ R
Sbjct: 235 QGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM---VYLCKNGR 291
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ + + + V H
Sbjct: 292 SMEARKVFD----------------------------------SMVKKGH---------- 307
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP ++ Y L+ T+ Y V+ L++ M G P+H + ILI A G V+ A+
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAML 367
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
MR+ G+ P++V Y T + R ++ A S F+ + + PN V + TL+
Sbjct: 368 AFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLC 427
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVI 671
+ ++ LAV +M G N + L+ C EG++
Sbjct: 428 ACDKWDKAEE-LAV--EMIGRGICPNTIFFNTLLNHLCKEGMV 467
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 33/338 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ D+ TYS ++ + A +A ++ G T IT+S L+ + AM
Sbjct: 93 RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 420 L-FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ M GC PN+ NILL+ + + +A L + T+ D T
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 479 ISNMEHKDKQSITN-----------TPNFV--------------PNSHYSSFDK--RFSF 511
I+ + + + +PN + P F K R
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYN LM C + ++A + + M G P+ + L+ G + Q
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L +M +G PD + I + + +A F +M+ + PN+VTY T++ A
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
R G +V ++ + + G N + LI C
Sbjct: 393 RVG---KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLC 427
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K + A+ A+ ++ PN+ T++D G + + ++ L
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +T N VF +L++ K+ E+ M G+ + +N LL C G
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ I+ + ++ ++ DV TY+T++ + A K+ E M+ GV PN +T
Sbjct: 468 TRAKNIFDLMVRVD----VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVT 523
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++++IN G +E A LF +M G P
Sbjct: 524 YNTIINGYCKNGRIEDACSLFRQMASKGVNPG 555
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--E 310
+PN + RT+I C + K+ + ++ + + N FN+L+N + T
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M ++ V D+ +Y L+ CL G A ++ ++ + GV K + TY+TI+
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL---LEGMVLDGV-KPNEVTYNTII 528
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A + M S GV P + +S++++ + A L+ M++ G +
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
NI+LQ + D A R+F + L
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCL 619
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN TII+ G C G + +++ + S+ V I +++++++ +
Sbjct: 519 PNEVTYNTIIN--GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M K G+ + +YNI+L+ C T A ++ + ++ L T++ +
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID----FHLQNRTFNIM 632
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + +L+ G+ PN +T+ ++ + GL+E+ LF + + GC
Sbjct: 633 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 692
Query: 430 EPNSQCCNILL 440
+S+ N L+
Sbjct: 693 TADSRMLNALV 703
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 174/407 (42%), Gaps = 43/407 (10%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEV--YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N + +LM D + V ++MQ GV D+ +Y L++ C A + A E+
Sbjct: 93 NAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELL 152
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E+ + ++ +V YS ++ + W+ KV E+M G+ P+ + +++LI++
Sbjct: 153 NEM----CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDS 208
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G V++A + + M + G EPN N+L+ + + A L ++ + Q
Sbjct: 209 LCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ T S +E + ++ +P T+N ++ C
Sbjct: 269 VVTYNTLITGLSSVLEMDEAMALLE----------EMMQGETRVRPDLMTFNSVIHGLCK 318
Query: 528 -----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+V+A+M E G N +++ +LI V+ A++++ M G+ PD
Sbjct: 319 IGWMRQALQVRAMMAEN---GCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPD 375
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL- 641
Y+ I + +++++A S EM+H ++P V YI LL+A G + + +
Sbjct: 376 SFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFN 435
Query: 642 ----------AVYQDMWKAGYKANDT-----YLKELIEEWCEGVIQD 673
A Y M +K+ + +LK++I+ EG+I D
Sbjct: 436 EMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMID---EGLIPD 479
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 129/624 (20%), Positives = 256/624 (41%), Gaps = 120/624 (19%)
Query: 30 NKHPVTKLFPLASSSSL-SSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLE 88
N+H +L PL S +L S++P+V RD S N A L + G L+
Sbjct: 32 NRH--LRLLPLPESPALLSALPSV------------RDAVSYNTVLA----ALCRQGCLD 73
Query: 89 EFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLE 148
A+ + V+ E ++ + +S + + R + VG+L+ + + GV P
Sbjct: 74 A-ALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ---AVGLLRSMQDCGVRPDV 129
Query: 149 LFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVN 208
+ G+ L++ C D+ +V+ V L+ ++C + + N
Sbjct: 130 VTYGT---LIRGLC----DAADVDTAVELLN-------------------EMCESGIEPN 163
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
+ + Y+C++ + K S + ++ P++ + +ID
Sbjct: 164 VVV-YSCLL-----------HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR 211
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMAS 326
G K+ + + + + + N+ +N L+N + ++ L++ KNM + GV D+ +
Sbjct: 212 HGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN L+ A + E+ E + ++ D+ T+++++ W + AL+V+
Sbjct: 272 YNTLITGLSSVLEMDEAMALLEEMMQGETR--VRPDLMTFNSVIHGLCKIGWMRQALQVR 329
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M G N + ++ LI V++AM L +EM +G +P+S +IL+ +
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKM 389
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
Q +RA E Y +S M H+
Sbjct: 390 RQVERA-----------------ESY------LSEMRHQ--------------------- 405
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEM-RTVGLSPNHISWTILIDACGGSGN 563
+P Y L+KA C + + L NEM R L + +++ +I SG
Sbjct: 406 ---GMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL--DAAAYSTMIHGAFKSGE 460
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + LK M ++G+ PD V Y+ I + +S L A + ++M P++ + +
Sbjct: 461 KKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDS 520
Query: 624 LLRARSRYGSLHEVQQCLAVYQDM 647
L++ YG+ + ++ L + ++M
Sbjct: 521 LIQG---YGAKGDTEKILELTREM 541
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
S + R + +P +Y LM+A C D +A L+ M+ G+ P+ +++ LI +
Sbjct: 83 SHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDA 142
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+V+ A+++L M E G+ P+VV Y+ + ++ R + +FEEM I+P++V Y
Sbjct: 143 ADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMY 202
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
L+ + R+G +V++ V M + G + N LI C EG +++
Sbjct: 203 TALIDSLCRHG---KVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVRE 252
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ FN L+ + H +K +E+ M G+ D +Y+IL+ C A+
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL 399
Query: 348 GEVKH-------------LEA---KGVL--------------KLDVFTYSTIVKVFADAK 377
E++H L+A +G++ KLD YST++ +
Sbjct: 400 SEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSG 459
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++A + +DM+ G+ P+ +T+S IN A +G + A + ++M +G P+ +
Sbjct: 460 EKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFD 519
Query: 438 ILLQACVEACQFDRAFRLFRSWT 460
L+Q ++ L R T
Sbjct: 520 SLIQGYGAKGDTEKILELTREMT 542
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 33/349 (9%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 155 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLI 210
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG E
Sbjct: 211 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 270
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEH 484
P+ N L++A + RA + + + +G + D + I H
Sbjct: 271 PDVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 324
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
+D Q++ KR PT ++ +L+ A + + ++N+M
Sbjct: 325 EDAQAVFEV------------MKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 372
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 373 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 432
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 433 EELFRSLPARNLIPDVVTWTSRIGAYSRR---KQYNRCLEVFEEMIDAG 478
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV Y+ ++ + ++ A ++L A P T++ L+ A +GL+E+A +F
Sbjct: 97 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 156
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G P++ N + ++ +A +F + Q + + N
Sbjct: 157 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-----TATYTMLIN 211
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K +S F H K KP T+ L+ A + KA + ++
Sbjct: 212 LYGKASKSYMALKVF----HEMRSQK---CKPNICTFTALVNAFAREGLCEKAEEIFEQL 264
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL P+ ++ L++A +G GA +I +M+ G PD +Y + R+
Sbjct: 265 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 324
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ A ++FE MK I P + +++ LL A SR G +V +C + M K+G K + L
Sbjct: 325 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG---KVAKCEEIVNQMHKSGIKPDTFVL 381
Query: 660 KELI 663
++
Sbjct: 382 NSML 385
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 138/316 (43%), Gaps = 29/316 (9%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 45 SNRIWGSLDSLSPNHTTWDDIINVA--VQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 102
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 103 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 162
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTT 517
+ V DG M+ D Q F+ KR +P+T T
Sbjct: 163 GFPPSAVVYNAYIDG------LMKGGDTQKAVEI-----------FERMKRDRCQPSTAT 205
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y +L+ + Y + +EMR+ PN ++T L++A G E A +I + ++
Sbjct: 206 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 265
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LH
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LH 324
Query: 636 EVQQCLAVYQDMWKAG 651
E Q AV++ M + G
Sbjct: 325 EDAQ--AVFEVMKRLG 338
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 165 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 224
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 225 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 284
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 285 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 340
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 396
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY +L+KA CT + +A+ EMR G P+ + + ID G+ + A++I
Sbjct: 131 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 190
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+ D P YT I + ++ + A +F EM+ + +PN+ T+ L+ A +R
Sbjct: 191 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR 250
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G + ++ +++ + +AG + + L+E +
Sbjct: 251 EGLCEKAEE---IFEQLQEAGLEPDVYAYNALMEAY 283
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 106/288 (36%), Gaps = 69/288 (23%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK AL+ + + PN+ +++ G K+ I+E L+ + +
Sbjct: 213 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI------------------- 329
+Y +N+LM A E++ MQ +G D ASYNI
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 330 ----------------LLKACCLAGNTVLAQEI----------------------YGEVK 351
LL A AG +EI YG +
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 392
Query: 352 HLEA---------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E KG D+ TY+ ++ ++ A ++ ++ + + + P+ +TW+
Sbjct: 393 QFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWT 452
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC-NILLQACVEACQF 449
S I A + + + +FEEM+ AGC P+ N+LL+ + F
Sbjct: 453 SRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVLLKVAIFMASF 500
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 173/422 (40%), Gaps = 44/422 (10%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD---LKFTLEVYKNMQKL--GVMADMASYNILLKACC 335
+LRS + L + N ++ V E + M + GV D S+ L+ CC
Sbjct: 133 ELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCC 192
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E + + A+G LD T + +V+ F ++ + M G
Sbjct: 193 REGRF---EEADALLAAMWAQGFC-LDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTP 248
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +S+ I+ G V+QA H+ EEM+ G +PN L+ + +RAFRL
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308
Query: 456 FRSWTLSK---------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSH- 501
F S T + G +G R + M + TNT + + H
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHC 368
Query: 502 -YSSFDKRF---------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSP 546
SFD+ F F P TYN ++ C + Y+V + + GL
Sbjct: 369 KGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV---LRMATSQGLHL 425
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++TILI G++ AL + K M E PD+ YTT I + + ++++Q+ LF
Sbjct: 426 DKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLF 485
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ + P TY +++ R G L L V++ M + G + LI
Sbjct: 486 DKCLSIGLVPTKQTYTSMIAGYCRLGKL---TSALKVFERMVQHGCLPDSITYGALISSL 542
Query: 667 CE 668
C+
Sbjct: 543 CK 544
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 165/405 (40%), Gaps = 44/405 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ R ++ C G + ++ A+ + +Q L+ ++ +F ++
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M ++G +M +Y+ + C G ++ + ++ + KG LK +V+T+++++
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERG---YVKQAFHVLEEMVGKG-LKPNVYTHTSLID 294
Query: 372 VFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
W + A ++ ++ S+ PN T++ +I G + +A L M++ G
Sbjct: 295 GLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTL--------------------SKTQVAL-- 468
PN+ L+ + FDRAF L L K Q A
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV 414
Query: 469 -------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G D T I EH + IT + + ++ S P TY +
Sbjct: 415 LRMATSQGLHLDKVTYTILITEHCKQGHITCALDL-----FKQMAEK-SCHPDIHTYTTI 468
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C ++ L ++ ++GL P ++T +I G + AL++ + M + G
Sbjct: 469 IAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGC 528
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
PD + Y I + RL++A +LFE M + P VT +TL
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 121/258 (46%), Gaps = 23/258 (8%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN T+I G C G + ++ + ++ + NIY +N+++ K E
Sbjct: 354 APNTNTYTTLIH--GHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ-E 410
Query: 311 VYKNMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
YK ++ G+ D +Y IL+ C G+ A +++ ++ A+ D+ TY+
Sbjct: 411 AYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM----AEKSCHPDIHTYT 466
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ ++ + + + ++ + LS G+ P T++S+I G + A+ +FE M+Q
Sbjct: 467 TIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQH 526
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY---DGNTD 477
GC P+S L+ + + + + A LF + L K T+V L +Y D T
Sbjct: 527 GCLPDSITYGALISSLCKESRLEEARALFETM-LDKHLVPCDVTRVTLAYEYCRRDKITI 585
Query: 478 RISNMEHKDKQSITNTPN 495
+S ++ DK+ +T +
Sbjct: 586 AVSFLDRLDKRQQAHTAD 603
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 153/353 (43%), Gaps = 37/353 (10%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +EAKG++ D+ T S ++ F + V +L G PNTI ++L+
Sbjct: 34 KQMEAKGIVP-DLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCL 92
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VA 467
G V++++H ++++ G + + ILL + + A +L R+ T+ V
Sbjct: 93 KGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVM 152
Query: 468 LGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF---------------- 509
DG D++ + E D S N P+ Y++ F
Sbjct: 153 YSTIIDGLCKDKLVD-EAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211
Query: 510 ---SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TYN L+ C + K L+ M G+ P+ + ++IL+D G V
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A QI +M + G++PDV +Y I + KR+ +A +L EM H + P+ VTY +L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
+ + G + + L + ++M G AN L++ C KNQN
Sbjct: 332 IDGLCKLGRITTI---LDLTKEMHHRGQPANLVTYNSLLDGLC------KNQN 375
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 64/406 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN I T++ G+C G+ KS ++ + +Q ++ + L+N + + +
Sbjct: 78 PNTIILNTLMK--GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + ++ D+ Y+ ++ C L E Y + A+G+ DV TY+T+
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLC---KDKLVDEAYDLYSEMNARGIFP-DVITYTTL 191
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A A + +M+ + PN T+++LI+ G V+++ +L M + G
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ +IL+ + +A ++F + +T V
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIF--LVMVQTGV----------------------- 286
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSP 546
P +YNI++ C RV MN +R + + P
Sbjct: 287 ----------------------NPDVYSYNIIINGLCKG-KRVDEAMNLLREMLHKNMIP 323
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++ LID G + L + K M G ++V Y + + +++ L +A +LF
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+MK IQPN TY L+ + G L + Q A++Q + GY
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRLKKGQ---ALFQHLLVKGY 426
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 132/366 (36%), Gaps = 86/366 (23%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+PN+Y T+ID G +S+ +L+ V
Sbjct: 217 NPNIYTYNTLIDTLCKEGKVKESK-------------------NLLAV------------ 245
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M K GV D+ Y+IL+ CL G A++I+ + + + DV++Y+ I+
Sbjct: 246 --MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF----LVMVQTGVNPDVYSYNIIING 299
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
K A+ + +ML + P+T+T+SSLI+ G + + L +EM G N
Sbjct: 300 LCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPAN 359
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL + D+A LF M+ K++
Sbjct: 360 LVTYNSLLDGLCKNQNLDKAIALF-------------------------MKMKER----- 389
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+P TY L+ C + +AL + G + +
Sbjct: 390 -----------------GIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWT 432
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T++I G + AL + M ++G P+ V + I+ + +A L EM
Sbjct: 433 YTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMI 492
Query: 611 HYQIQP 616
+ P
Sbjct: 493 AKGLLP 498
>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13800
gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 883
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/574 (22%), Positives = 233/574 (40%), Gaps = 84/574 (14%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
I + I GR D VVG ++ LG+ D + L+ R D E+E + +
Sbjct: 189 ISRMIASGRSDMVVGFFWEIERLGLDA----DAHTYVLVVQALWRNDDKEELEKLLSRL- 243
Query: 180 VLEEFRLP-VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKK---- 234
++ E R P V L+ I LC+N+ I Y + P D + G
Sbjct: 244 LISETRNPCVFYLN---FIEGLCLNQ---MTDIAYFLLQPLRDANILVDKSDLGIAYRKV 297
Query: 235 -RDLVSALRAYDAS------KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R L +R DA +KH P++Y+ II+ + K+ ++ + +
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 288 TLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N + +S++ F+ +++K ++ + D YN+ A G A E
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E + KG+ DV Y+T++ A + +M G TP+ + ++ L
Sbjct: 418 LFRE---MTGKGIAP-DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A GL ++A + M G +P N++++ ++A + D+A + S
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES------- 526
Query: 466 VALGEDYDGNTDRISNMEHKDKQS-ITNTPNFVPNSHYS-SFDK--RFSFKPTTTTYNIL 521
+EHK +++ + F +F++ R F + Y L
Sbjct: 527 ----------------LEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTL 570
Query: 522 MKACCT--DYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+ C DY + + L++ M +G+ P + LI A NV A + +I+
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR---------- 628
+ PD+ YT I R KQA++LFE+MK ++P++VTY LL +
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME 690
Query: 629 ---------------SRYGSLHEVQQCLAVYQDM 647
+RY L+++++ A+++DM
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 180/424 (42%), Gaps = 46/424 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K ++ A+ ++ K N I +I+ G++ ++ ++++ R N++L+
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N + ++ +E+++ M G+ D+ +Y L+ CCL G A ++
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL---- 453
Query: 351 KHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+E G K D+ Y+ + A Q A + + M + GV P +T + +I
Sbjct: 454 -MIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI 512
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC---QFDRAFRL----------- 455
+AG +++A +E + E ++ +++ C C F+R RL
Sbjct: 513 DAGELDKAEAFYESLEHKSRENDA---SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT 569
Query: 456 -FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--------TPNFVPNSHYSSFD 506
F S K ++ +D DR+ + + ++S+ N +
Sbjct: 570 LFTSLCAEKDYISKAQDL---LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TY I++ C + + AL +M+ + P+ +++++L+ N
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NS 679
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ L + + M + PDVV YT I LK+ ++LF++MK +I P++VTY L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 625 LRAR 628
L+ +
Sbjct: 740 LKNK 743
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 66/345 (19%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M KLGV + + Y L+ A C N A+E + + L K ++ D+FTY+ ++ +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF---EILVTKKIVP-DLFTYTIMINTYC 646
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A + EDM V P+ +T+S L+N+ + + + EM P+
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVV 699
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
I++ + + LF+
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDM----------------------------------- 724
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
KR P TY +L+K + L EM+ + P+ +T+L
Sbjct: 725 ------------KRREIVPDVVTYTVLLKNKPE-----RNLSREMKAFDVKPDVFYYTVL 767
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID G++ A +I M E G+ PD YT I C + LK+A +F+ M +
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV 827
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+P++V Y L+ R G V + + + ++M + G K L
Sbjct: 828 KPDVVPYTALIAGCCRNGF---VLKAVKLVKEMLEKGIKPTKASL 869
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L E R +S + + + + DA G G VE A+++ + M G++PDV+ YTT I C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW-KAGYK 653
+ AF L EM P++V Y L + G E + L + ++ K Y
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Query: 654 ANDTYLKELIE 664
++ ++ LI+
Sbjct: 503 THNMVIEGLID 513
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D K A+++D++ + + ++ + L+ N + + E M+ V D+ Y +L
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLK-NKPERNLSRE----MKAFDVKPDVFYYTVL 767
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G+ A+ I+ ++ + + D Y+ ++ + + A + + M+
Sbjct: 768 IDWQCKIGDLGEAKRIFDQM----IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+GV P+ + +++LI C G V +A+ L +EML+ G +P
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 181/420 (43%), Gaps = 68/420 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G +L SA+R Y K PN++I T+ID+ + G + ++ +Y+
Sbjct: 579 LLICS-CKELG---NLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQ 634
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L+ + L++ F+ ++ + K G + D AC +V
Sbjct: 635 LKCSGIALDMVAFSIVVRMYV--------------KAGSLKD---------AC-----SV 666
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA +E + + D++ Y +++++ + +L + V + +
Sbjct: 667 LAT--------MEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELY 718
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN CA A V + LF EMLQ G PN+ N++L +A F++A LF W
Sbjct: 719 NCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELF--WMA 776
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + Y NT + +KD N + V N + F + YN
Sbjct: 777 RKRGLVDVISY--NTVIAAYGHNKD---FKNMASAVRNMQFDGFS------VSLEAYN-- 823
Query: 522 MKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C D Y + M R V + +H ++ I+I+ G G ++ +L +
Sbjct: 824 ---CMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTEL 880
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRY 631
RE G+ PD+ +Y T IK + ++ A L +EM+ I+P+ +TY IT L+ +Y
Sbjct: 881 RECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKY 940
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 52/309 (16%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L+ ++ Y+ I++V + W A + + E S G + +++LI AC+ G +
Sbjct: 219 GKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNML 278
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDG 474
F ML+ G +PN +L+ L+ + W + + +
Sbjct: 279 LGGKWFRMMLELGVQPNIATFGMLMG-------------LYQKGWNVEEAEFVF------ 319
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
S + + S YS+ T Y L + Y + +
Sbjct: 320 --------------SKMRSFGIICQSAYSAM---------ITIYTRL-----SLYNKAEE 351
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ M ++ N +W +L++A G +E A Q+L M+E SP++VA+ T I
Sbjct: 352 IIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYG 411
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+ + A LF ++++ ++P+ TY +++ R G+ E + Y+++ + GY
Sbjct: 412 KLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEW---YYKELKRLGYMP 468
Query: 655 NDTYLKELI 663
N + L LI
Sbjct: 469 NSSNLYTLI 477
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 184/475 (38%), Gaps = 63/475 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + +GK ++ +A R + + P+ R++I+ G G+Y ++ Y++
Sbjct: 401 VAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKE 460
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ N +L+N+ A D + + +M K+G + LLKA AG
Sbjct: 461 LKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHS-SILGTLLKAYEKAGR 519
Query: 340 T-----VLAQEIYGEVKHLEAKGVLKLDVFTY------STIVKVFADAKWWQMALKVKED 388
+L Y V L + + V TY +KV D KW ED
Sbjct: 520 INKVPLLLKDSFYQHV--LVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTF---ED 574
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVEAC 447
L + LI +C G +E A+ ++ +M ++ +PN C ++ V C
Sbjct: 575 NL----------YHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGC 624
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT----PNFVPNSH-Y 502
F A +L++ S + + + KD S+ T N +P+ + Y
Sbjct: 625 -FAEAEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLY 683
Query: 503 SSFDKRFS----FKPTTTTYNILMKA--------------CCTDYYRV---KALMNEMRT 541
+ + Y+ ++K+ CC V L +EM
Sbjct: 684 RDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQ 743
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G SPN I++ +++D G + A ++ + R+ G+ DV++Y T I +K K
Sbjct: 744 RGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLV-DVISYNTVIAAYGHNKDFKN 802
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA-VYQDMWKAGYKAN 655
S M+ +L Y +L + G + +C V Q M ++ Y ++
Sbjct: 803 MASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQM----ECFRNVLQRMKQSSYTSD 853
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 44/451 (9%)
Query: 228 VREFGKKRDLVSALRAY-DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R G++ D +A R + S S + + T+I C G+ + + +
Sbjct: 232 LRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELG 291
Query: 287 VTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V NI F LM + N + +F V+ M+ G++ A Y+ ++
Sbjct: 292 VQPNIATFGMLMGLYQKGWNVEEAEF---VFSKMRSFGIICQSA-YSAMITIYTRLSLYN 347
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+EI G L + + ++V + ++ ++ + A +V +M A +PN + +
Sbjct: 348 KAEEIIG----LMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAF 403
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--- 458
++LI + A LF ++ AG EP+ +++ + A ++
Sbjct: 404 NTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKR 463
Query: 459 ----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNT----------PNF 496
+TL Q A +D +G + +M Q SI T N
Sbjct: 464 LGYMPNSSNLYTLINLQ-AKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINK 522
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
VP SF + T+ + ++ +K C D ++ + + + + +L
Sbjct: 523 VPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVD--EALKVLGDKKWKDQTFEDNLYHLL 580
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I +C GN+E A++I M + P++ T I + +A L++++K I
Sbjct: 581 ICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKCSGI 640
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
++V + ++R + GSL + LA +
Sbjct: 641 ALDMVAFSIVVRMYVKAGSLKDACSVLATME 671
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 28/286 (9%)
Query: 176 GLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRY--ACIVPRADILFCNFVREFGK 233
G+ + +E+ + ELD + ++ ++ NL ++ C + F ++R GK
Sbjct: 161 GIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGK 220
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY-MKSRAIYEDLRSQNVTLNIY 292
L L AY+ I+ V G D+ R I E S L+
Sbjct: 221 ---LEKNLNAYN---------------VILRVLGRREDWGTAERMIGEVSDSFGSELDFR 262
Query: 293 VFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VFN+L+ + L + ++ M +LGV ++A++ +L+ N A+ ++ ++
Sbjct: 263 VFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKM 322
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G++ YS ++ ++ + A ++ M V N W L+NA +
Sbjct: 323 RSF---GIICQS--AYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQ 377
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +E+A + EM +A PN N L+ + A RLF
Sbjct: 378 QGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLF 423
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +I+ +M ED ++ +V + + + RL++A + EM+ PN+V + TL+
Sbjct: 349 AEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLIT 408
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
YG L + ++ D+ AG + ++T + +IE W
Sbjct: 409 G---YGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGW 445
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 182/456 (39%), Gaps = 65/456 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN Y ++ G + A+ +D+ R T +Y A + +
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V +++ G D+ + N++L+A C G E ++ L + DV +Y+ ++
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPV---DEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC- 429
+ A+ W + E+M++AG PN +T+S+LI GL E+ + +M + GC
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 430 ----------------------------------EPNSQCCNILLQACVEACQFDRAFRL 455
PN C N LL+ A +++ A L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 456 F-----RSWTLSKTQVALGEDY---DGNTDRI-----SNMEHKD-KQSITNTPNFVPNSH 501
+ L + D+ +G DR+ +EH IT T
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 502 YSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
D+ +P T +Y I++K C+ V A LM++M G PN ++
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +A L M
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ PN + Y ++ A S G +++V Q QD
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 215/552 (38%), Gaps = 102/552 (18%)
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
VGVL+ L+ G A D L+ Q + D G V+ E RL +++L
Sbjct: 166 VGVLRDLHGRGCA----LDVGNCNLVL---QAVCDQGPVD---------EAVRL-LRDLL 208
Query: 193 EEFRIVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
F +PDV N +R C+ R +G +DL+ + A
Sbjct: 209 PSFGC------EPDVVSYNAVLRGLCMA-----------RRWGHVQDLMEEMVAAGCP-- 249
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
PN+ T+I G + + ++ + ++ ++ ++++ L+
Sbjct: 250 ----PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ M G+ ++ YN LLK C A A+ + E+ + LD T++
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP----LDDVTFN 361
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+V ++V E ML G P+ IT++++IN GL+++A+ L M
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN+ I+L+ A +R + E
Sbjct: 422 GCRPNTVSYTIVLKGLCSA------------------------------ERWVDAEELMS 451
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
Q I P T+N L+ C +A L+ +M G S
Sbjct: 452 QMIQQ-----------------GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ IS++ +ID G +GN + AL++L +M + GMSP+ + Y++ R+ + +
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE ++ ++ + V Y ++ + + G + LA M +G N++ LI
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY---MVSSGCVPNESTYTILIRG 611
Query: 666 WC-EGVIQDKNQ 676
EG +++ +
Sbjct: 612 LASEGFVKEAQE 623
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 133/350 (38%), Gaps = 58/350 (16%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ C AG A+ + V + + +TY +V+ AL V
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVP-------VAPNAYTYFPLVRALCARGRIADALAVL 134
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DM G P + + A A A+ + ++ GC + CN++LQA +
Sbjct: 135 DDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQ 194
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D A RL R + +P+
Sbjct: 195 GPVDEAVRLLR-------------------------------------DLLPS------- 210
Query: 507 KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
F +P +YN +++ C + V+ LM EM G PN ++++ LI +G
Sbjct: 211 --FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLF 268
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ++ M E G +PDV Y T I + +RL+ A + M Y + PN+V Y TL
Sbjct: 269 ERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL 328
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
L+ E + LA +M+ +D L++ C+ + D+
Sbjct: 329 LKGLCSADRWEEAEGLLA---EMFDKDCPLDDVTFNILVDFLCQNGLVDR 375
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 253 SPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFT 308
SPN+ T++ G+C + ++ + ++ ++ L+ FN L++ + +
Sbjct: 319 SPNVVCYNTLLK--GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+EV + M + G M D+ +Y ++ C G L E ++ + A G + + +Y+
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEG---LIDEAVMLLRSMAACGC-RPNTVSYTI 432
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A+ W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C P+ + ++ +A D A L T+ + +A +G +++
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
M + + + + N+ SS KR TD R + M
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGE----------------TD--RAIEFLAYMV 594
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ G PN ++TILI G V+ A +IL
Sbjct: 595 SSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
>gi|18642701|gb|AAL76193.1|AC092173_5 Putative crp1 protein [Oryza sativa Japonica Group]
Length = 1089
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 461 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 514
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 515 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 575 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 631
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 632 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 674
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 675 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 735 QLFEEIKSIKLMPTVSMMNALITA 758
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 404 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 463
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 464 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 523
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 524 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 583
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 584 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 643
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 644 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 703
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 704 DARAKGYQVG-----------------------------------------------TIA 716
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 717 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 777 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 828
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 458 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 517
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 518 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 665 EWCE 668
E
Sbjct: 575 ACGE 578
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 488 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 547
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 548 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 607
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 608 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 667
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 668 EDMNKIGVQPDEMFLSALVD 687
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 627 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 681 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 740
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 741 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 797 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 853
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 459 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 518
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 519 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 578
Query: 631 YGSL 634
G++
Sbjct: 579 SGAV 582
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 62/383 (16%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ Y FNSL+ + + +++ M G D+ SY L++ C AG A E++
Sbjct: 187 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 246
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
GE+ + D+ Y+ +VK +A+ + L + M G P+T ++++++
Sbjct: 247 GEMD--------QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
++A + +EM + G P C ++ A + + A R+ L
Sbjct: 299 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC--- 355
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
KP TYN L++ C
Sbjct: 356 --------------------------------------------KPNVWTYNALVQGFCN 371
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ ++ L+N+MR G++P+ +++ +LI G++E A ++L++M DG+ D
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I + R QA SLF+ ++ I+PN VT+ +L+ + G + L +
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL---E 488
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
M AG + IE C+
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCK 511
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 57/402 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + C +I+ G + + E ++ + N++ +N+L+ N + +
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ GV D +YN+L++ C+ G+ + + ++ +E G++ D +TY+ ++
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHI---ESAFRLLRLMEGDGLIA-DQYTYNALI 436
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + + + + G+ PN +T++SLIN +G + A E+M+ AGC
Sbjct: 437 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 496
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ + ++ C+ + +Q L I M KD
Sbjct: 497 PDTYTYSSFIE---HLCK------------MKGSQEGLS--------FIGEMLQKD---- 529
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
KP+T Y I++ + Y V EM + G +P+
Sbjct: 530 --------------------VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T + A G + A +L M ++G++ D +AY T + + A S+ ++
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
M PN TY LLR R + +V +WKA
Sbjct: 630 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA--GVWKA 669
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 193/467 (41%), Gaps = 56/467 (11%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYI--------CRT-I 262
R+A P A + +R ++ DL ALR + P+ Y CRT
Sbjct: 145 RHAPPAPTAPT-YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQ 203
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTL----------------------NIYVFNSLMN- 299
+DV D M R +D+ S + +++++ +L+
Sbjct: 204 VDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKG 263
Query: 300 -VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
NA + L + + M++LG +Y ++ C A+E+ E+ KG+
Sbjct: 264 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE---KGL 320
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
V T + ++ + AL+V E M G PN T+++L+ N G V +AM
Sbjct: 321 APC-VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 379
Query: 419 HLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
L +M G P++ N+L++ C++ + AFRL R L + + + Y N
Sbjct: 380 TLLNKMRACGVNPDAVTYNLLIRGQCIDG-HIESAFRLLR---LMEGDGLIADQYTYNA- 434
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--L 535
+ N KD ++ S + S + R KP T+N L+ C A
Sbjct: 435 -LINALCKDGRTDQAC------SLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKF 486
Query: 536 MNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ +M + G +P+ +++ I+ C G+ EG I +++++D + P V YT I +
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD-VKPSTVNYTIVIHKLL 545
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + + EM P++VTY T +RA G L+E + L
Sbjct: 546 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 592
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 180/451 (39%), Gaps = 66/451 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + K+ + ALR + K PN++ ++ G C G K+ + +R+
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ--GFCNEGKVHKAMTLLNKMRAC 388
Query: 286 NVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V + +N L+ ++ H ++ + + M+ G++AD +YN L+ A C G T
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ LE +G+ K + T+++++ + +A K E M+SAG TP+T T+S
Sbjct: 448 ACSLF---DSLETRGI-KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503
Query: 403 SLINACANAGLVEQAMHLFEEMLQ-----------------------------------A 427
S I ++ + EMLQ +
Sbjct: 504 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563
Query: 428 GCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQV---ALGEDYDGNTDRISNME 483
GC P+ ++A C+E + + A + + + V A DG+ I +
Sbjct: 564 GCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS-IGQTD 621
Query: 484 H-----KDKQSITNTPN----FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
H K S+ + PN F+ H P T + TD +
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA-GVWKAIELTDVF---G 677
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L + M+ PN +++ +++ G E A ++ +M+ED +S + YT +
Sbjct: 678 LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 737
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SKR A+ L M + P L++Y LL
Sbjct: 738 KSKRYLDAWVLVCSMIQHGFIPQLMSYQHLL 768
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 36/349 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++MQ GV D+ +Y L++ C A + A E+ E+ + ++ +V YS ++
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM----CESGIEPNVVVYSCLL 190
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A W+ KV E+M G+ P+ + ++ LI++ G V++A + ++M++ G E
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--------------DYDGNT 476
PN N+L+ + + A L R+ L K VAL + D
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSL-RNNMLEKG-VALDAVTYNTLITGLSGVLEMDEAM 308
Query: 477 DRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKP-----------TTTTYNILMK 523
+ M H + N T N V + + R +F+ T+N+L+
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ KA LM+EM + GL P+ +++ILI+ V+ A +L MR DG+ P
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++V Y + ++QA + F+EM H + ++V Y T++ R
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACR 476
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 162/354 (45%), Gaps = 31/354 (8%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYN +L A C G + A V E + +Y+T+++ + A
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPT----AVSYTTLMRALCAERRTGQA 132
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ + DM ++GV P+ +T+ +LI +A V++A+ L EM ++G EPN + LLQ
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+A +++ ++F + + V + Y G D + E K K++
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVM---YTGLIDSLCR-EGKVKKAT---------- 238
Query: 501 HYSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
DK +P TYN+L+ + C + +L N M G++ + +++ LI
Sbjct: 239 --QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLIT 296
Query: 557 ACGGSGNVEGALQILK--IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G ++ A+ +L+ I E + P+VV + + I ++ R++QAF + + M
Sbjct: 297 GLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
NLVT+ L+ R +H+V++ + + +M +G + + LI +C+
Sbjct: 357 ACNLVTFNLLIGGLLR---VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCK 407
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 72/445 (16%)
Query: 268 ICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+C + +A+ D+++ V ++ + +L+ +A D+ +E+ + M + G+ +
Sbjct: 123 LCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPN 182
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ Y+ LL+ C AG +++ E + +G+ + DV Y+ ++ + A
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEE---MSGRGI-EPDVVMYTGLIDSLCREGKVKKAT 238
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V + M+ G+ PN +T++ LIN+ G V++AM L ML+ G ++ N L+
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Query: 444 VEACQFDRAFRLFRSWTLSKTQ-----VALGEDYDG--NTDRISN-MEHKDKQSITNTP- 494
+ D A L +T V G T R+ + +D +
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358
Query: 495 NFVP--------------NSHYSSFDKRFS--FKPTTTTYNILMKACCTDYY--RVKALM 536
N V D+ S +P + TY+IL+ C + R ++L+
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVE------------------------------- 565
++MR G+ P + + L+ A G +E
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLR 478
Query: 566 ---GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
A + LK M ++G+ PD V Y+ I + S L A + ++M P++ +
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFD 538
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDM 647
+L++ YG+ + ++ L + ++M
Sbjct: 539 SLIKG---YGAKGDTEKVLELIREM 560
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT +Y LM+A C + +A L+ +M+ G+ P+ +++ LI + +V+ A++
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L+ M E G+ P+VV Y+ ++ ++ R + +FEEM I+P++V Y L+ +
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R G + + Q V M + G + N LI C EG +++
Sbjct: 230 REGKVKKATQ---VMDKMMERGLEPNVVTYNVLINSMCKEGSVKE 271
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 149/400 (37%), Gaps = 89/400 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ + +ID G K+ + + + + + N+ +N L+N + +K + +
Sbjct: 216 PDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSL 275
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG-------NTVLAQEIYGE--------------- 349
NM + GV D +YN L+ L+G +L + I+GE
Sbjct: 276 RNNMLEKGVALDAVTYNTLITG--LSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ + A+ ++ T++ ++ + A+++ ++M S+G+ P
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ T+S LIN V++A L +M + G EP LL A E ++A F
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
HK+ K
Sbjct: 454 DEM------------------------HKN------------------------CKLDVV 465
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y+ ++ C D + + M GL P+ +++++LI+ SG++ A ++LK M
Sbjct: 466 AYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G PDV + + IK ++ L EM I
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDI 565
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 196/451 (43%), Gaps = 60/451 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
++RA+YE++ ++ ++S++N D + + E+ + M+K+GV + +Y L+
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315
Query: 332 KACCLAGN-----------------------TVLAQEIYGEVKHLEAKGVL----KLDVF 364
+ AG+ T L ++ K EA+ + KL++
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI 375
Query: 365 ----TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TY+ ++ + + + ++M + PN IT+SS+IN G++++A+++
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV--ALGEDYDGNTDR 478
++ML PN+ IL+ +A + + A L+ LS +V L + N R
Sbjct: 436 MKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKR 495
Query: 479 ISNMEHKDK--QSITNTPNFVPNSHYSSFDKRF-------------------SFKPTTTT 517
M+ ++ + +T+ + + +Y+S F S T
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVT 555
Query: 518 YNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
YN+L+ Y K++ + M +GL+PN ++ I+I A G ++ AL++ M+
Sbjct: 556 YNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ P + T + + +++A ++ EM I PNLV + LL A S+ G +
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V Q +++ + G K N LI +C
Sbjct: 676 VLQ---MHEQLVDMGLKINQEAYNNLIVVFC 703
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 182/437 (41%), Gaps = 44/437 (10%)
Query: 282 LRSQNVTLNIYVFNSLM-NVNAHDLKFTL-EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N+ + ++N L+ + NA L + ++Y M V ++ ++N+L+ A C GN
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 340 TVLAQE-----------------IYGEVKHL---EAKGVLKL--------DVFTYSTIVK 371
+LA + I+G +H +A G L + D T + +VK
Sbjct: 61 LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + ++ ++++S G + I +++LI+ AG + A+ L E M + G
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
+ N L+ + ++D+A L + S K V D D N+E
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240
Query: 489 SITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
T + + F P TY+ ++ C D + L+ EM+
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+G+ PNH+++T LID+ +G+ A + GM+ D+V TT + +S + K
Sbjct: 301 KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPK 360
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A +F + + PN +TY L+ + G + V+ L Q+M + N
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLL---QEMEEKHINPNVITYS 417
Query: 661 ELIEEWCEGVIQDKNQN 677
+I + + I D+ N
Sbjct: 418 SIINGYTKKGILDEAIN 434
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 190/456 (41%), Gaps = 34/456 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + KK L A+ PN Y+ +ID G C G + +Y
Sbjct: 414 ITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILID--GYCKAGKQEIATDLY 471
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + +N +F+ L+N + E+ K++ G++ D +Y L+ A
Sbjct: 472 NEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKA 531
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + V+ + K + DV TY+ ++ + ++ A V M+ G+ PN
Sbjct: 532 GKESAALNM---VEEMTEKSI-PFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPN 586
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ +I A G ++ A+ L+ EM P+S CN L+ EA + ++A +
Sbjct: 587 QATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLN 646
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHK---DKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ L + H+ + S + N V H D K
Sbjct: 647 EMSVMGIHPNL-------------VIHRVLLNASSKSGKANAVLQMHEQLVD--MGLKIN 691
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
YN L+ C KA ++ M G + +++ LI S +V+ AL
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYT 751
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G+SP++V Y + + + + + LF++MK + P+ TY TL+ S YG
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLI---SGYG 808
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++ + +Y +M G+ + LI ++ +
Sbjct: 809 KIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAK 844
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 162/405 (40%), Gaps = 52/405 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN +ID G C GD + ++ +++ +++ N+ ++S++N L +
Sbjct: 376 PNSITYTALID--GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAI 433
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK------------------ 351
V K M ++ + Y IL+ C AG +A ++Y E+K
Sbjct: 434 NVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL 493
Query: 352 -----HLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
EA+ +LK LD Y++++ F A AL + E+M + +
Sbjct: 494 KRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDV 553
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T++ LIN G E A ++ M++ G PN NI+++A + + D A L
Sbjct: 554 VTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALEL--- 609
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
W K+ + NT + E + + N N + P +
Sbjct: 610 WNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM---------SVMGIHPNLVIH 660
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ A V + ++ +GL N ++ LI + A +LK M
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR 720
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
DG D V Y I+ S +K+A + + +M + + PN+VTY
Sbjct: 721 DGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 113/267 (42%), Gaps = 41/267 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
++ + K+ +L +AL ++ K H P+ C T++ G+ K+ + ++
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMG 652
Query: 287 VTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N+ + L+N ++ K L++++ + +G+ + +YN L+ C T A
Sbjct: 653 IHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKAT 712
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW--- 401
+ +K++ G + D TY+ +++ + ++ + AL ML+ GV+PN +T+
Sbjct: 713 SV---LKYMIRDGFVA-DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLL 768
Query: 402 --------------------------------SSLINACANAGLVEQAMHLFEEMLQAGC 429
+LI+ G ++++ L+ EM+ G
Sbjct: 769 LGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGF 828
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P + N+L+ + + D+A L
Sbjct: 829 VPKTSTYNVLISDFAKVGKMDQARELL 855
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT---LE 310
PN+ I R +++ G ++E L + +N +N+L+ V L+ T
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCR-LRMTKKATS 713
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-------------------- 350
V K M + G +AD +YN L++ C + + A Y ++
Sbjct: 714 VLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLL 773
Query: 351 ------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
++ G L D TY T++ + + ++++ +M++ G P T
Sbjct: 774 GAGLMAERDELFDKMKENG-LNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKT 832
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
T++ LI+ A G ++QA L EM G P+S +IL+
Sbjct: 833 STYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 179/427 (41%), Gaps = 62/427 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ I +IID +C D + A ++ + Q ++ +I+ + S
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIID--SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M ++ D+ ++ ++ A C G A EI V +
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI---VDMMI 302
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + DV TY+T++ A+KV + M+ G P+ I++++LIN +
Sbjct: 303 QRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++AM+LFEEM + P+++ N L+ + A LF VA G+
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE------MVARGQ---- 411
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P TY+IL+ + C + +
Sbjct: 412 -------------------------------------MPDLVTYSILLDSLCKNRHLEEA 434
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + L+P+ + I+ID +G +E A + + G+ P V Y I
Sbjct: 435 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 494
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ L +A LF EM P+ TY T+ R + +E + + + ++M G+
Sbjct: 495 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG---FLQNNETLRAIQLLEEMLARGF 551
Query: 653 KANDTYL 659
A+ +L
Sbjct: 552 SADSCFL 558
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 151/375 (40%), Gaps = 72/375 (19%)
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S V N+Y N L+N H + F V + KLG D ++ L++ C+ G
Sbjct: 93 SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI- 151
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
GE HL K M+ G PN +T+
Sbjct: 152 ------GEALHLFDK--------------------------------MIDEGFQPNVVTY 173
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+LIN G A+ L M Q C+P+ ++ + + Q AF LF
Sbjct: 174 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQ--- 230
Query: 462 SKTQVALGEDYDGNTDRISNMEHK-----DKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+G+ + +++ H + + +T N + NS P
Sbjct: 231 -----MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS---------KILPDVV 276
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ ++ A C + +A +++ M G+ P+ +++T L+D ++ A+++ +M
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G +PDV++YTT I + ++ +A LFEEM + P+ TY TL+ YG
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM-----YGLC 391
Query: 635 H--EVQQCLAVYQDM 647
H +Q +A++ +M
Sbjct: 392 HVGRLQDAIALFHEM 406
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 173/397 (43%), Gaps = 28/397 (7%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
H P + T+I + G ++ +++ + + N+ + +L+N +
Sbjct: 131 HQPDPTTFT--TLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 188
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ + ++M++ D+ Y ++ + C A ++ + + +G+ D+FTY+
Sbjct: 189 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQ---MVGQGI-SPDIFTYT 244
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++V + W+ + M+++ + P+ + +S++++A G V +A + + M+Q
Sbjct: 245 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHK 485
G EP+ L+ + D A ++F + D T I+ HK
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM----MVRKGFAPDVISYTTLINGYCKIHK 360
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTV 542
+++ R + P T TYN LM C R++ AL +EM
Sbjct: 361 IDKAMYLFEEMC----------RKEWIPDTKTYNTLMYGLC-HVGRLQDAIALFHEMVAR 409
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++++IL+D+ + ++E A+ +LK + ++PD+ Y I R+ L+ A
Sbjct: 410 GQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA 469
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
LF + + P++ TY ++ + G L+E +
Sbjct: 470 RDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/393 (17%), Positives = 155/393 (39%), Gaps = 57/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ +++ +C +C ++ +
Sbjct: 206 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC-EWKHVTTLLN 264
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ +F+++++ + K T E+ M + GV D+ +Y L+ CL
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + + DV +Y+T++ + A+ + E+M P+T
Sbjct: 325 EMDEAVKVF----DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++L+ + G ++ A+ LF EM+ G P+ +ILL + + + A L ++
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S + P Y
Sbjct: 441 IEAS-----------------------------------------------NLNPDIQVY 453
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + + L + + + GL P+ ++ I+I G + A ++ M
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ SPD Y T + +++ +A L EEM
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 503 SSFDKRFSFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
SSF++ P + + + A Y V +L +M + G+ PN + ILI++
Sbjct: 51 SSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSF 110
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
V A +L + + G PD +TT I+ +CV K + +A LF++M QPN
Sbjct: 111 CHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK-IGEALHLFDKMIDEGFQPN 169
Query: 618 LVTYITLLRARSRYGS 633
+VTY TL+ + G+
Sbjct: 170 VVTYGTLINGLCKVGN 185
>gi|110288709|gb|ABG65945.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110288711|gb|ABG65946.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 614
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 107 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 160
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 161 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 221 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 277
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 278 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 336
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 337 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 396
Query: 620 TYITLLRA 627
L+ A
Sbjct: 397 MMNALITA 404
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 50 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 109
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 110 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 169
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 170 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 229
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 230 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 290 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 350 DARAKGYQVG-----------------------------------------------TIA 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 363 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 423 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 474
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 104 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 163
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 164 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 665 EWCE 668
E
Sbjct: 221 ACGE 224
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 134 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 193
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 194 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 253
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 254 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 313
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 314 EDMNKIGVQPDEMFLSALVD 333
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 105 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 164
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 165 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 224
Query: 631 YGSL 634
G++
Sbjct: 225 SGAV 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 273 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 327 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 386
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 387 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 442
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 443 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 499
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 26/273 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+L+V Y+ ++++ A+ W + + M + G+ T+ +LI+ + GL E A+
Sbjct: 153 LELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVATNSTYGTLIDVYSKGGLREDAL 212
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
E ML+ G EP+ I++Q +A +F +A FR W+L G R
Sbjct: 213 FWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWSL------------GEPLR 260
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALM 536
SN + + + P V + +S+ SF + TYN L+ +
Sbjct: 261 PSN------KHMMDAPESVERALFSN----ASF--GSHTYNTLIDTYGKAGQHKEASETF 308
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M G+ P +++ +I CG G +E +L+ M E SPD Y T I + +
Sbjct: 309 AKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKH 368
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ A F+ MK ++P+ V+Y TLL A S
Sbjct: 369 NDIDMATKYFKRMKESYLEPDPVSYRTLLYAYS 401
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 176/444 (39%), Gaps = 59/444 (13%)
Query: 230 EFGKKRDLVSALRAYDASKKHL--------------SSPNMYICRTIIDVCGICGDYMKS 275
EF +K L LR S KH+ +S + T+ID G G + ++
Sbjct: 248 EFFRKWSLGEPLRP---SNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEA 304
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + Q + FN+++++ N L+ + + M +L D +YN L+
Sbjct: 305 SETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISL 364
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ +A + + +K + L+ D +Y T++ ++ K A ++ +M G
Sbjct: 365 HTKHNDIDMATKYFKRMK----ESYLEPDPVSYRTLLYAYSIRKMVCEAEELITEMDEKG 420
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ + T S+L AG+ E+++ F+ +AG S+C + A E A
Sbjct: 421 LEIDQFTQSALTRMYIEAGMPERSLLWFQRFHRAG-NMTSECYAANIDAYGERGHISEAE 479
Query: 454 RLFRSWTLSKTQVA------------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++F W + ++ +G+ YD +M DK +
Sbjct: 480 KVFL-WCQERKNLSAVEFNVMIKAYGVGKYYDKACQLFDSM---DKHGVA-----ADRCS 530
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
YSS I + A + K + M+ GL N I + +I
Sbjct: 531 YSSL--------------IQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKL 576
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A + K M G+ PD++ Y I + R+K+A S E+K + N V Y
Sbjct: 577 GQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNTVIY 636
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQ 645
+L++ ++ G+L E Q+ + Q
Sbjct: 637 NSLIKLYTKVGNLREAQETYRLLQ 660
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 169/390 (43%), Gaps = 39/390 (10%)
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + +N+L++ A K E + M K G+ ++N ++ C GN
Sbjct: 280 NASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHIC---GNHGRL 336
Query: 344 QEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + G L+ D TY+T++ + MA K + M + + P+ +++
Sbjct: 337 EEVSSLLRKM---GELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSY 393
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+L+ A + +V +A L EM + G E + + L + +EA +R+ F+ +
Sbjct: 394 RTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEAGMPERSLLWFQRFHR 453
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-----KPTTT 516
+ + E Y N D + H S +K F + +
Sbjct: 454 AGNMTS--ECYAANIDA-----------------YGERGHISEAEKVFLWCQERKNLSAV 494
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+N+++KA Y KA L + M G++ + S++ LI + A LK M
Sbjct: 495 EFNVMIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRM 554
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ + + Y I V+ +L+ A +++EM + ++P+++ Y L+ A YG+
Sbjct: 555 QVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINA--LYGA- 611
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
V++ ++ ++ +AG N LI+
Sbjct: 612 GRVKEAISYANEIKRAGLPGNTVIYNSLIK 641
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 25/270 (9%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ +M K GV AD SY+ L++ A +A+ +K ++ G++ + Y +
Sbjct: 514 QLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPY---LKRMQVAGLVT-NCIPYCAV 569
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F +MA V ++M+ GV P+ I + LINA AG V++A+ E+ +AG
Sbjct: 570 ISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGL 629
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN-----TDRISNMEH 484
N+ N L++ + A +R S+ A+ Y N + S +E
Sbjct: 630 PGNTVIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAV---YSSNCMIGLYTKQSMVEQ 686
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
+ T N N FSF Y + + + + N+MR + L
Sbjct: 687 AKEIFETLKKNGTAN--------EFSFAMMLCLYKNIER-----FDVAIQIANQMRKLEL 733
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIM 574
+ +S+ I++D +G + A++I K M
Sbjct: 734 LTDSLSYNIVLDLYATAGRPKEAIEIFKDM 763
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 124/305 (40%), Gaps = 47/305 (15%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N+++KA + A +++ ++ GV D +YS++++V A A +A
Sbjct: 496 FNVMIKAYGVGKYYDKACQLFDS---MDKHGVAA-DRCSYSSLIQVLASADQPHIAKPYL 551
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M AG+ N I + ++I+ G +E A +++EM+ G +P+ +L+ A A
Sbjct: 552 KRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGA 611
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ A S+ + L GNT + NS +
Sbjct: 612 GRVKEAI----SYANEIKRAGL----PGNT-------------------VIYNSLIKLYT 644
Query: 507 KRFSFKPTTTTYNILMKA----------CCTDYYRVKALMNEMRTV------GLSPNHIS 550
K + + TY +L + C Y ++++ + + + + N S
Sbjct: 645 KVGNLREAQETYRLLQSSEEGPAVYSSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEFS 704
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +++ + A+QI MR+ + D ++Y + + + R K+A +F++M
Sbjct: 705 FAMMLCLYKNIERFDVAIQIANQMRKLELLTDSLSYNIVLDLYATAGRPKEAIEIFKDMV 764
Query: 611 HYQIQ 615
IQ
Sbjct: 765 TASIQ 769
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLEVY-KNMQKLG 319
+I G+ Y K+ +++ + V + ++SL+ V A D + Y K MQ G
Sbjct: 499 MIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRMQVAG 558
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ + Y ++ G +A+ +Y K + GV K D+ Y ++ A
Sbjct: 559 LVTNCIPYCAVISCFVKLGQLEMAEGVY---KEMIGHGV-KPDIIVYGVLINALYGAGRV 614
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-PNSQCCNI 438
+ A+ ++ AG+ NT+ ++SLI G + +A + +LQ+ E P N
Sbjct: 615 KEAISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQETY-RLLQSSEEGPAVYSSNC 673
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVA 467
++ + ++A +F TL K A
Sbjct: 674 MIGLYTKQSMVEQAKEIFE--TLKKNGTA 700
>gi|215694797|dbj|BAG89988.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 930
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 302 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 355
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 356 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 415
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 416 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 472
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 473 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 515
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 516 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 575
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 576 QLFEEIKSIKLMPTVSMMNALITA 599
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 245 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 304
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 305 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 364
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 365 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 424
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 425 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 484
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 485 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 544
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 545 DARAKGYQVG-----------------------------------------------TIA 557
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 558 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 617
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 618 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 669
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 299 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 358
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 359 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 415
Query: 665 EWCE 668
E
Sbjct: 416 ACGE 419
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 329 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 388
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 389 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 448
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 449 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 508
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 509 EDMNKIGVQPDEMFLSALVD 528
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 468 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 521
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 522 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 581
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 582 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 637
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 638 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 694
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 300 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 359
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 360 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 419
Query: 631 YGSL 634
G++
Sbjct: 420 SGAV 423
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 172/420 (40%), Gaps = 76/420 (18%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
SSP Y +ID+ G + + + + ++S+ V + + F+ L+ V A +
Sbjct: 141 SSPEPY--NEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAV 198
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ G D S++I++ + C A+ + +KH + DV Y+++
Sbjct: 199 HAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKH-----KFEPDVIVYTSL 253
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + A A +V DM AGV PN T+S +I++ G + +A +F EM+ AGC
Sbjct: 254 VHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 313
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L++ V+A + ++ +++
Sbjct: 314 DPNAVTFNSLMRVHVKAGRTEKVLQVYNQM------------------------------ 343
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
KR T +YN L+++ C D +A +++ M G++PN
Sbjct: 344 -----------------KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPN 386
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + +V GA ++ M+E P+ + Y +++ SK + L +
Sbjct: 387 ASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKK 446
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM +++PN+ TY L+ G W Y +KE++EE C
Sbjct: 447 EMDESEVEPNVNTYRILILMFCEKGH--------------WNNAY----NLMKEMVEEKC 488
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ + V + + D+ A + K+ PN+Y +ID CG ++ ++ +
Sbjct: 248 IVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSE 307
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ N FNSLM +V A + L+VY M++LG AD SYN L+++ C
Sbjct: 308 MIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDEN 367
Query: 336 ---------------LAGNTVLAQEIYGEVKHL-EAKGVLKL-----------DVFTYST 368
+A N I+G + L + G ++ + TY+
Sbjct: 368 LDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNI 427
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++++FAD+K M LK+K++M + V PN T+ LI G A +L +EM++
Sbjct: 428 LMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEK 487
Query: 429 C-EPNSQCCNILLQACVEACQFDR 451
C +PN +L+ A Q +
Sbjct: 488 CLKPNLSIYETVLELLRNAGQLKK 511
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 149/358 (41%), Gaps = 61/358 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ GV ++++++L++ AG LA E +E G K D ++S ++
Sbjct: 169 MKSRGVRITVSTFSVLVRRYVRAG---LAAEAVHAFNRMEDYGC-KPDKVSFSIVISSLC 224
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A ++ D L P+ I ++SL++ AG + +A +F +M +AG +PN
Sbjct: 225 KKRRASEA-ELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY 283
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+I++ + Q RA +F E D D
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVF------------SEMIDAGCD----------------- 314
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHIS 550
P T+N LM KA T+ +V + N+M+ +G + + IS
Sbjct: 315 ------------------PNAVTFNSLMRVHVKAGRTE--KVLQVYNQMKRLGCAADTIS 354
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI++ N++ A+++L M + G++P+ + + + A ++ +MK
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ PN +TY L+R + + L + ++M ++ + N + LI +CE
Sbjct: 415 ELKCMPNTLTYNILMRM---FADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCE 469
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 19/242 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + KKR A +D S KH P++ + +++ GD K+ ++ D
Sbjct: 214 VSFSIVISSLCKKRRASEAELFFD-SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSD 272
Query: 282 LRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ V N+Y ++ +++ AHD V+ M G + ++N L++
Sbjct: 273 MKEAGVKPNVYTYSIVIDSLCRCGQITRAHD------VFSEMIDAGCDPNAVTFNSLMRV 326
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG T ++Y ++K L D +Y+ +++ + A+KV + M+ G
Sbjct: 327 HVKAGRTEKVLQVYNQMKRLGCAA----DTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN T++S+ A V A ++ +M + C PN+ NIL++ ++ D
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVL 442
Query: 454 RL 455
+L
Sbjct: 443 KL 444
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 33/347 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++++ ++ V+NSL+ + L+V M + G
Sbjct: 359 GLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP 418
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAI---VKGYLP-DVFTFNTLIDGYCKRLKLDSA 474
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M + G+ P+ IT++S++N AG ++ FEEM+ GC PN+ NIL++
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534
Query: 443 CVEACQFDRA----FRLFR--------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ Q + A R+ + S+ D DG ++ K +
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 491 TNTPNFVPNSHYSSFDKRFS-----------FKPTTTTYNILMKACC--TDYYRVKALMN 537
+T N + ++ S + + + +KP TY IL+ C + R A +
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
EM + G P+ ++ +++ + V A+ I+ IM G+ P+VV
Sbjct: 655 EMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 170/404 (42%), Gaps = 61/404 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
G +R +++++ ++V ++ FN++++ D+ + + + K G+ A+ +
Sbjct: 190 GHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTC 249
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI ++ C G +E V+ + A + DV TY+T+++ Q A +
Sbjct: 250 NIWIRGLCEDGRL---EEAVALVERMGA--YVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCNILLQACVEA 446
M++ G P+ T++++I+ +G++++A L ++ + G P+ C+++ C E
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+RA LF + + KD
Sbjct: 365 -DIERALELF-----------------------NEAQAKD-------------------- 380
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP YN L+K C + AL MNEM G P+ ++ I+I+ GN+
Sbjct: 381 ----LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++ G PDV + T I + +L A L E M Y I P+++TY ++
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L + G EV + +++M G + N LIE +C+
Sbjct: 497 LNGLCKAGKAKEVNE---TFEEMILKGCRPNAITYNILIENFCK 537
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 178/433 (41%), Gaps = 37/433 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG--VMADMASY 327
GD M+S A+ + + ++ N + N + D + E ++++G V D+ +Y
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLE-EAVALVERMGAYVAPDVVTY 283
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L++ C A + G + + +G + D FTY+TI+ + + Q A ++ +
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMN---QGCIP-DDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
D + G P+ +T+ SLIN G +E+A+ LF E +P+ N L++
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNT-------PN-FVP 498
A ++ + Y+ + + M + D + N P+ F
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWT-YNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458
Query: 499 NSHYSSFDKR---------------FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
N+ + KR + P TYN ++ C V EM
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++ ILI+ +E A ++ M +DG+ PD V++ T I R+ L
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A+ LF+++ T+ L+ A Y S +Q ++ +M GYK + +
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGA---YSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635
Query: 662 LIEEWCEGVIQDK 674
L++ C+ D+
Sbjct: 636 LVDGLCKAANVDR 648
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 150/365 (41%), Gaps = 64/365 (17%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+N HD +VY M GV D ++ + LK+ CL G +A + ++
Sbjct: 112 IMDALVNAAYHDQAH--KVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL---LRS 166
Query: 353 LEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L +G Y T+V+ ++A + A + ++ML V P+ T++++++A
Sbjct: 167 LSERGC-DAKPAAYCTVVRGLYAHGHGYN-ARHLFDEMLGRDVFPDVATFNNVLHALCQK 224
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V ++ L ++L+ G N CNI ++ E + + A VAL E
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA-------------VALVE- 270
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
+ P+ V TYN LM+ C D
Sbjct: 271 ---------------RMGAYVAPDVV-------------------TYNTLMRGLCKDSKV 296
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A + M G P+ ++ +ID SG ++ A ++LK G PD V Y +
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AV 643
I +++A LF E + ++P+LV Y +L++ R G + Q +
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416
Query: 644 YQDMW 648
+ D+W
Sbjct: 417 HPDIW 421
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 17/286 (5%)
Query: 394 VTPNTIT--WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P+++ + + I A A AG + A+ FE M C P + N ++ A V A D+
Sbjct: 65 LAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +++ + + D +T R+ + +T P+ S ++
Sbjct: 125 AHKVY----VRMLAAGVAPDARTHTVRLKSF------CLTGRPHVALRLLRSLSERGCDA 174
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
KP + Y + L +EM + P+ ++ ++ A G+V + +L
Sbjct: 175 KPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALL 234
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + GMS + I+ RL++A +L E M Y + P++VTY TL+R +
Sbjct: 235 AKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKD 293
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ E Q L M G +D +I+ +C+ G++Q+ +
Sbjct: 294 SKVQEAAQYLG---RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 151/362 (41%), Gaps = 61/362 (16%)
Query: 270 GDYMKSRAIYEDLRSQN------VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVM 321
G ++ +++ LRS N ++Y + + ++ ++ D+ LE+ + M+ +
Sbjct: 117 GKDRRAMELFDWLRSANERSPLRALCDVYSYTATISLCIHGQDVDRALELMQEMRSRNIE 176
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y L+ C G LA +IY ++ + +V TY+T+V V+ W+
Sbjct: 177 RNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMP----NVVTYNTLVDVYGKLGQWER 232
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ V + M GV P T+++LI AC +A+ +++ +L G PNS N L+
Sbjct: 233 AIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALIS 292
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + Q +A +++ E N DR
Sbjct: 293 AYGKTTQLGKALEVYQ------------EMLRQNMDR----------------------- 317
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ TY+ L+ AC + + NEM+ PN +++ L+ AC
Sbjct: 318 ------------SVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACA 365
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G E A ++ + M G +PDVV YT I R + ++A F +M +P+ +
Sbjct: 366 QGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAI 425
Query: 620 TY 621
Y
Sbjct: 426 VY 427
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 40/324 (12%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV++Y+ + + + AL++ ++M S + N T+++L+N C G + A+ ++
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIY 202
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M C PN N L+ + Q++RA + +
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHV-----------------------LDV 239
Query: 482 MEHKDKQSITNTPNFV---------PNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYY 530
M+H+ + + T N + P + + + S F P +TTYN L+ A
Sbjct: 240 MKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQ 299
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL EM + + I+++ LI AC +G E AL+I M++D P+ V Y +
Sbjct: 300 LGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNS 359
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ C + + ++A +FE+M + P++VTY L+ A R G + Q+ L + M
Sbjct: 360 LVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGG---QWQKALQAFHKMC 416
Query: 649 KAGYKANDTYLKELIEE-WCEGVI 671
G K + +I+ W G+I
Sbjct: 417 VQGCKPDAIVYNAIIDTLWETGII 440
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 12/239 (5%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A I C ++ + +L+ +R+ + + N++ +++VC CG + IY
Sbjct: 149 ATISLCIHGQDVDRALELMQEMRSRNIER------NVHTYTALMNVCIKCGKLPLALDIY 202
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R+ N N+ +N+L++V + + V M+ GV + +YN L+ AC +
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMC 262
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A +Y + L + G + TY+ ++ + AL+V ++ML + +
Sbjct: 263 NQPREALAVY---QRLLSDG-FTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRS 318
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
IT+SSLI+AC AG E A+ +F EM Q C PN+ N L+ AC + Q+++A +F
Sbjct: 319 VITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVF 377
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 23/316 (7%)
Query: 155 FKLLKNECQRL-LDSGEVEMFVGLMEVLEEFRLPVKELDEEFR---IVQLCVNKPDVNLA 210
F+ L ++ RL D +E+F L E R P++ L + + + LC++ DV+ A
Sbjct: 106 FRALHHDLSRLGKDRRAMELFDWLRSANE--RSPLRALCDVYSYTATISLCIHGQDVDRA 163
Query: 211 IRYACIVPRADI--------LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTI 262
+ + +I N + GK L AL Y++ + PN+ T+
Sbjct: 164 LELMQEMRSRNIERNVHTYTALMNVCIKCGK---LPLALDIYNSMRAVNCMPNVVTYNTL 220
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
+DV G G + ++ + + ++ + V + +N+L+ + + L VY+ + G
Sbjct: 221 VDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGF 280
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YN L+ A A E+Y E+ + + V TYS+++ A W+
Sbjct: 281 TPNSTTYNALISAYGKTTQLGKALEVYQEM----LRQNMDRSVITYSSLISACEKAGQWE 336
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M PNT+T++SL+ ACA G E+A +FE+M GC P+ L+
Sbjct: 337 TALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALI 396
Query: 441 QACVEACQFDRAFRLF 456
A Q+ +A + F
Sbjct: 397 SAYERGGQWQKALQAF 412
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 151/368 (41%), Gaps = 60/368 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V M+ G ++ +YN+++ C G A+EI + L + G + D+ +Y+T
Sbjct: 207 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI---LNRLSSYG-FQPDIVSYTT 262
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A+ W + +M+ PN +T+ L+ G+VE+A+ + ++M Q G
Sbjct: 263 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 322
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ CNI++ A + + D A+ D ++NM
Sbjct: 323 CTPNTTLCNIVINAICKQGRVDDAY-----------------------DFLNNM------ 353
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ P T +Y +++ C + K L+ EM P
Sbjct: 354 ------------------GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 395
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ I G +E A++++++M E G S +V Y + R+ A LF
Sbjct: 396 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 455
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ +PN +TY TLL L + LA +M + N L+ +
Sbjct: 456 NNLP---CEPNTITYTTLLTGLCHAERLDAAAELLA---EMIQKDCPLNAVTFNVLVSFF 509
Query: 667 CE-GVIQD 673
C+ G +++
Sbjct: 510 CQKGFVEE 517
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 45/378 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G + NI++ A C G + Y + ++ G D +Y+T
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGR---VDDAYDFLNNMGMYGC-NPDTISYTT 367
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ A W+ A ++ +M+ PN +T+++ I GL+EQA+ L E M + G
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFR---------SWTLSKTQVALGEDYDGNTDR 478
C N L+ CV+ + D A LF ++T T + E D +
Sbjct: 428 CSVGIVTYNALVHGFCVQG-RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 486
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ M KD T+N+L+ C + +A L+
Sbjct: 487 LAEMIQKD------------------------CPLNAVTFNVLVSFFCQKGFVEEAMELV 522
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G +PN I++ L+D N E AL++L + G+S D + Y++ + V R
Sbjct: 523 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 582
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
R ++A + ++ ++P + Y +L A + E Q + + M G N+
Sbjct: 583 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR---CETDQAIDFFAYMVSNGCMPNE 639
Query: 657 TYLKELIEEWC-EGVIQD 673
+ LIE EG++++
Sbjct: 640 STYIILIEGLAHEGLLKE 657
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL + G PD+V+YTT +K ++R LF EM + PN VT+ L+R
Sbjct: 244 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
R G V++ + V Q M + G N T +I C +G + D
Sbjct: 304 RGGM---VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 345
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 55/288 (19%)
Query: 389 MLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
ML G P+ +T++ L+ A C ++G E AM++ +EM GC PN N+++
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGE-AMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A + +R+S+
Sbjct: 237 RVDDAKEIL--------------------NRLSS-------------------------- 250
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P +Y ++K C + VK L EM PN +++ +L+ G VE
Sbjct: 251 -YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+Q+L+ M + G +P+ I + R+ A+ M Y P+ ++Y T+L
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQ 672
R R G ++ L +M + N+ I C+ G+I+
Sbjct: 370 RGLCRAGRWEHAKELLP---EMVRKNCPPNEVTFNTFICILCQKGLIE 414
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+ +++ + + A+ V ++M + G TPN +T++ +IN G V+ A +
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ G +P+ +L+ A ++D LF
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF-------------------------A 281
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E DK+ + P T+++L++ C R ++ +M
Sbjct: 282 EMVDKKCV----------------------PNEVTFDMLVRFFCRGGMVERAIQVLQQMS 319
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +PN I+I+A G V+ A L M G +PD ++YTT ++ R+ R +
Sbjct: 320 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 379
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
A L EM PN VT+ T + + G ++Q + + + M + G
Sbjct: 380 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGL---IEQAIKLIELMPEYGCSVGIVTYN 436
Query: 661 ELIEEWC 667
L+ +C
Sbjct: 437 ALVHGFC 443
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 157/399 (39%), Gaps = 60/399 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC------------- 266
++ F VR F + + A++ +H +PN +C +I+ +C
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351
Query: 267 -------------------GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
G+C G + ++ + ++ +N N FN+ + +
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ +++ + M + G + +YN L+ C+ G A E++ + + +
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-------CEPNT 464
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ A+ A ++ +M+ N +T++ L++ G VE+AM L +
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNM 482
M++ GC PN N LL + C + A L L V+L Y D +S
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG--LVSKGVSLDTITYSSVVDVLSR- 581
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
E + +++I + +P YN ++ A C +A+ M
Sbjct: 582 EDRTEEAI----------QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 631
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ G PN ++ ILI+ G ++ A +L + G+
Sbjct: 632 SNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGAL--QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ + T + G S EG+ M + G P VV YT ++ +S +A
Sbjct: 148 PSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 207
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ +EM+ PN+VTY ++ R G + + ++ L
Sbjct: 208 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 245
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 175/412 (42%), Gaps = 34/412 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVM 321
G+C G + + +E + T++I+ + ++++ A + K + M+K+ G
Sbjct: 139 GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ-DAVALMEKITANGCT 197
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+A+YN LL C G +E ++ + G DV TY++++ K
Sbjct: 198 PTIATYNALLNGLCKMGRL---EEAIDLLRKIVDNGCTP-DVVTYTSLIDGLGKEKRSFE 253
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A K+ ++M G+ +T+ +++LI AG + QA +++ M GC P+ + ++
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313
Query: 442 ACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+A + A R+F+S L+ +V Y + D
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVV----YSALIHGLCKARKMD----------CA 359
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
+ K F P T TYNIL+ C D +A +EM G P+ ++ IL+
Sbjct: 360 LEMLAQMKKAFC-TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVS 418
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN + A + M SP+VV Y T I + ++L +A F+ MK P
Sbjct: 419 GFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPP 478
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ Y +L+ + G L C+ ++ +M ++G AN LI C+
Sbjct: 479 DSFVYSSLVDGLCKSGKLE--GGCM-LFDEMERSGV-ANSQTRTRLIFHLCK 526
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 171/418 (40%), Gaps = 48/418 (11%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGN 339
D+ + NV + Y A + + V + M++ GV + ++N++L C +G
Sbjct: 93 DVETWNVLITGYCL-------AREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145
Query: 340 TVLAQEIYGEVKHLEAKGV--LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ A + H E +D+ TY+ IV A K Q A+ + E + + G TP
Sbjct: 146 VLAAMD------HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++L+N G +E+A+ L +++ GC P+ L+ + + A++LF+
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-------- 501
T+ T + G G + S++ +K S P+ V S
Sbjct: 260 EMALRGLVLDTVCYTALIRGLLQAGKIPQASSV-YKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 502 ---------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ S + R P Y+ L+ C AL + +M+ +P+ I+
Sbjct: 319 GRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID SG+VE A M E G PDV Y + ++ A +F++M
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS 437
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PN+VTY TL+ + L + +Q M + G + L++ C+
Sbjct: 438 SSHCSPNVVTYGTLISGLCKRRQLTKAS---LYFQHMKERGCPPDSFVYSSLVDGLCK 492
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 152/362 (41%), Gaps = 56/362 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ + + L+ + +L+ + A +
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ C AG A I+ K +EA+G+ +V YS ++
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF---KSMEARGLAPNEV-VYSALI 347
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G VE A F+EML+AGC+
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ +A GNTD + D S
Sbjct: 408 PDVYTYNILVSGFCKA---------------------------GNTDAACGV-FDDMSSS 439
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
+PN V TY L+ C KA + M+ G P+
Sbjct: 440 HCSPNVV-------------------TYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+D SG +EG + M G++ +C ++ R+ +A SLF
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC-KANRVDEAVSLFNA 539
Query: 609 MK 610
++
Sbjct: 540 IR 541
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 135/315 (42%), Gaps = 20/315 (6%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T + ++ VFA K + A + ++ L+ P+ TW+ LI A E+A +
Sbjct: 59 VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118
Query: 423 EMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G P+ + N++L ++ + A F + T + + + Y D ++
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDI-HTYTAIVDWLAK 177
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
K + ++ N PT TYN L+ C R++ ++ +R
Sbjct: 178 -NKKIQDAVALMEKITANG----------CTPTIATYNALLNGLC-KMGRLEEAIDLLRK 225
Query: 542 V---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G +P+ +++T LID G A ++ K M G+ D V YT I+ +++ +
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ QA S+++ M P++VT T++ + G + + +++ M G N+
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG---RIGAAVRIFKSMEARGLAPNEVV 342
Query: 659 LKELIEEWCEGVIQD 673
LI C+ D
Sbjct: 343 YSALIHGLCKARKMD 357
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 164/421 (38%), Gaps = 85/421 (20%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + LAK+ ++++ ++E + + G A+ +L +G+ K GR++ +
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKIT-ANGCTPTIATYNAL---LNGLCKM---GRLEEAI 220
Query: 134 GVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEVEMFVGLMEV 180
+L+K+ + G P L DG G +KL K R L V + +
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDV----------------NLAIR-YACIVPRA--- 220
L+ ++P + Q CV PDV A+R + + R
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 221 -DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
++++ + K R + AL KK +P+ +ID G+C GD +RA
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID--GLCKSGDVEAARA 396
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ M + G D+ +YNIL+ C A
Sbjct: 397 FFDE---------------------------------MLEAGCKPDVYTYNILVSGFCKA 423
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GNT A ++ ++ +V TY T++ + A + M G P+
Sbjct: 424 GNTDAACGVFDDMSSSHCSP----NVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +SSL++ +G +E LF+EM ++G NSQ L+ +A + D A LF
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFN 538
Query: 458 S 458
+
Sbjct: 539 A 539
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 191/433 (44%), Gaps = 27/433 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L C +E G +S L +A HLSS + Y C +I+ G G ++ +++++
Sbjct: 90 LICECCKE-GDLDRAMSLLSQMEAKGFHLSSTS-YAC--LIEALGNVGRTSEADMLFKEM 145
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ +++SL+ + L V K M LG+ +Y I L AG
Sbjct: 146 VCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRL 205
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ + + ++ KG L+ F YS +V ++ D W+ A++V E++ G++ +T
Sbjct: 206 ---EDTWSTINEMKQKG-FPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHI 261
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S+I+ G +++A+ LF++M + G PN N L++ + F +AF LF
Sbjct: 262 CNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFT--- 318
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ L D IS + + K I ++ S R + K Y +
Sbjct: 319 -DMQEQGLYPDPKIFVTIISCLGEQGKWDII-------KKYFESMKIRGN-KEYGAVYAV 369
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + + +++ G+ + + +L +A G E + +L+IM +G
Sbjct: 370 LVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEG 429
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P++V I + R +A S++ +K + P++VTY TL++A R EV
Sbjct: 430 IEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVP 489
Query: 639 QCLAVYQDMWKAG 651
+Y++M G
Sbjct: 490 ---IIYKEMENDG 499
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 115/240 (47%), Gaps = 7/240 (2%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D CN + FGK +L AL+ + +K PN+ ++I GD+MK+ ++
Sbjct: 258 DTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLF 317
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
D++ Q + + +F ++++ K+ + + +++M+ G A Y +L+
Sbjct: 318 TDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQY 377
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A E V+ L+++GVL + + + +A + + V + M + G+ PN
Sbjct: 378 GKFQNAGEC---VQALKSEGVL-VSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPN 433
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + LINA NAG +A+ ++ + ++G P+ L++A + A +FD +++
Sbjct: 434 IVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYK 493
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEH 484
E +S C+ L+ C + DRA L + + LS T A + GN R S +
Sbjct: 81 ELSSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADM 140
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTV 542
K+ + + +KP Y+ L++ ++ EM +
Sbjct: 141 LFKEMVC-----------------YGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDL 183
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ + ++ I +D G+G +E + M++ G + Y+ + + + K+A
Sbjct: 184 GIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKA 243
Query: 603 FSLFEEMKHYQIQPNLVTYI--TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+ EE++ I +L T+I +++ +YG L E L +++ M K G + N
Sbjct: 244 IEVLEEIRERGI--SLDTHICNSIIDTFGKYGELDEA---LKLFKKMQKEGVRPNIVTWN 298
Query: 661 ELIEEWCE 668
LI+ C+
Sbjct: 299 SLIKWHCK 306
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 258 ICRTIIDVCGICGDYMKSRAIY-----EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+C +I CG S+ ++ DL S N L Y + K +E++
Sbjct: 698 LCNALIHAYAWCGSLALSKQVFNEMGCRDLVSWNSMLKSYAIHG-------QTKDAVELF 750
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-KLDVFTYSTIVK 371
Q++ V D A++ +LL AC G +++ + + GV+ +LD YS +V
Sbjct: 751 ---QRMNVCTDSATFVVLLSACSHVGFVDEGVKLFNCMS--DDHGVVPQLD--HYSCMVD 803
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG---LVEQAMHLFEEMLQ 426
++ A + +E + + P+++ WSSL+ +C G L + A F+E+ Q
Sbjct: 804 LYGGAG---KIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGKTPLAKSAADKFKELDQ 858
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 139/343 (40%), Gaps = 53/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K Y+ + + G A + +NIL+ C G+ LAQ ++ + K L+ V
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAI----TKWGLRPSVV 178
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ + ++K ML++GV P+ T+S LIN ++ A LF+EM
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + + D A ++
Sbjct: 239 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY---------------------------- 270
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ S P TYN L+ C D + L++EM
Sbjct: 271 --KQMLSQ-----------------SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G+++ A + K M ++ + D VAYT I + R A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ EM ++P+ TY ++ + G + + + L Q
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 33/379 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DI +F + + + L A+ Y +++H + CR +++ +
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWG 128
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++ ++Y FN LM+ D++ V+ + K G+ + SYN L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ ++ML G+
Sbjct: 189 RLGDL---DEGFRLKSAMLASGV-QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G V+ AM ++++ML P+ N L+ + +A L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 456 FRSWT---LSKTQVALGEDYDG---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ L ++ DG D S EH+ + N
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN----------------- 347
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ Y L+ C + V A ++ EM +VGL P+ ++T++I+ G+V
Sbjct: 348 -IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 568 LQILKIMREDGMSPDVVAY 586
++LK M+ DG P VV Y
Sbjct: 407 SKLLKEMQRDGHVPSVVTY 425
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K++++ E++L G + ++ L++ G + A +F+ + + G P+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSY 180
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ + D FRL + S Q
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------- 209
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
P TY++L+ C + A L +EM GL PN +++T L
Sbjct: 210 ----------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G V+ A++I K M +SPD++ Y T I + LKQA L +EM +
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 615 QPNLVTYITLLRARSRYGSL 634
+P+ +TY TL+ + G L
Sbjct: 314 KPDKITYTTLIDGCCKEGDL 333
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 503 SSFD--KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTIL 554
S FD ++ +P+ +YN LM Y R+ L + M G+ P+ ++++L
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNG----YIRLGDLDEGFRLKSAMLASGVQPDVYTYSVL 218
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ ++ A ++ M G+ P+ V +TT I ++ R+ A ++++M +
Sbjct: 219 INGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 278
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EG---- 669
P+L+TY TL+ + G L + + +M G K + LI+ C EG
Sbjct: 279 SPDLITYNTLIYGLCKKGDLKQAHHLI---DEMSVKGLKPDKITYTTLIDGCCKEGDLDS 335
Query: 670 -------VIQDKNQNQGEVT-------LCRRTNSQRPQSLLLEKVAVHLQKSA 708
+IQ+ N EV LC+ S + +L E ++V L+ A
Sbjct: 336 AFEHRKRMIQE-NIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA 387
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ID G C G + IY+ + SQ+++ ++ +N+L+ DLK
Sbjct: 245 PNGVTFTTLID--GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D +Y L+ CC G+ A E K + + + +LD Y+ +
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFE---HRKRMIQENI-RLDEVAYTAL 358
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ +MLS G+ P+ T++ +IN G V + L +EM + G
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGH 418
Query: 430 EPNSQCCNILLQA 442
P+ N+L+
Sbjct: 419 VPSVVTYNVLMNG 431
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 513 PTTTTYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
P T +L Y++ V E+ G + + IL+ G++ A +
Sbjct: 106 PIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVF 165
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + G+ P VV+Y T + +R L + F L M +QP++ TY L+ +
Sbjct: 166 DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + + ++ +M G N LI+ C+
Sbjct: 226 SKMDDANE---LFDEMLVKGLVPNGVTFTTLIDGHCK 259
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 37/386 (9%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N L+++ A L EV+ M K GV D+ ++N ++ C G+ A+ + G
Sbjct: 274 YNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAEAEALLG--- 330
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E KGV D T++ + ++A+A+ A+ + + AG+ P+ +T+ +L+
Sbjct: 331 MMEEKGVAP-DTKTFNIFLSLYAEARDIGAAVLCYKRIREAGLCPDEVTYRALLGVLCRK 389
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+V + L +EM +A + C +++ V D+AF L L K QV
Sbjct: 390 NMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDL-----LKKFQV----- 439
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYNILMKA 524
N + SN+ + +I + F + + F K N+++KA
Sbjct: 440 ---NGEMSSNI----RSAIMDV--FAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKA 490
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
Y + +L M+ G PN ++ L+ G+ V+ A+ ++ M+E G P
Sbjct: 491 YGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQEVGFKPP 550
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++ I R +L A S+F+EM ++PN V Y +L+ + +GSL E L
Sbjct: 551 CQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFAEHGSLEE---ALK 607
Query: 643 VYQDMWKAGYKANDTYLKELIEEWCE 668
+ M ++G +N L L++ +C+
Sbjct: 608 YFHMMEESGLSSNLVVLTSLLKSYCK 633
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 192/448 (42%), Gaps = 42/448 (9%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
PR + + +GK L A + K + +++ T+I VCG GD ++ A
Sbjct: 268 PRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAEAEA 327
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + + V + FN +++ A D+ + YK +++ G+ D +Y LL C
Sbjct: 328 LLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIREAGLCPDEVTYRALLGVLC 387
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ +E+ + +E + + +D IV+++ A + + G
Sbjct: 388 ---RKNMVREVEDLIDEME-RAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNGEM 443
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFR 454
+ I S++++ A GL E+A +F AG + + CN++++A +A +D+A
Sbjct: 444 SSNIR-SAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKAIS 502
Query: 455 LFR------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF+ +W T +L + G M+ D+ +
Sbjct: 503 LFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEM------------------QE 544
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSG 562
FKP T++ ++ C Y R+ L EM G+ PN + + LI+ G
Sbjct: 545 VGFKPPCQTFSAVI-GC---YARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFAEHG 600
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++E AL+ +M E G+S ++V T+ +K + L+ A +++E MK+ + +LV
Sbjct: 601 SLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLVACN 660
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++ + G + E + ++M +A
Sbjct: 661 SMIGLFADLGLVSEAKLAFENLREMGRA 688
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 30/306 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +++ A+ W DM GV P T+S L++ AGLV++A+ M
Sbjct: 108 YNVVLRALGKAQQWDQLRLCWLDMAKNGVLPTNNTYSMLVDVYGKAGLVQEALLWIRHMR 167
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+ +++ + FDRA R ++ W K + ++++E +
Sbjct: 168 VRGFFPDEVTMCTVVKVLKDVGDFDRAHRFYKGWCEGKVE-------------LNDLELE 214
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTDYYRV--KALMNEMRT 541
D I N+ N S SFK +T + I +A + R + +N +
Sbjct: 215 DSLGINNSSN-------GSASMGISFKQFLSTELFKIGGRAPVSGEARSTNSSSLNGPQK 267
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
LS ++ +LID G +G + A ++ M + G++ DV + T I VC L +
Sbjct: 268 PRLSN---TYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAE 324
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A +L M+ + P+ T+ L S Y ++ + Y+ + +AG ++ +
Sbjct: 325 AEALLGMMEEKGVAPDTKTFNIFL---SLYAEARDIGAAVLCYKRIREAGLCPDEVTYRA 381
Query: 662 LIEEWC 667
L+ C
Sbjct: 382 LLGVLC 387
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 184/433 (42%), Gaps = 49/433 (11%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF-----NSLMNVNAHDLKFTLEVY 312
+C I G+C D + RA+ L +N+ + + ++V+ H + +E+Y
Sbjct: 362 LCYKRIREAGLCPDEVTYRALLGVLCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMY 421
Query: 313 KN----------MQKLGVMADMASYNI---LLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
++K V +M+S NI ++ G A++++ ++L +
Sbjct: 422 VGEGDVDKAFDLLKKFQVNGEMSS-NIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGR--- 477
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV + ++K + AK + A+ + + M + G PN T++SL+ + A LV+QAM
Sbjct: 478 KRDVLECNVMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMD 537
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNT 476
L +EM + G +P Q + ++ Q A +F+ + +V G +G
Sbjct: 538 LVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFA 597
Query: 477 DRISNME-----HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--------MK 523
+ S E H ++S ++ V S S+ K + + Y + +
Sbjct: 598 EHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLV 657
Query: 524 ACCT--DYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
AC + + L++E +R +G + + IS+ ++ G G ++ A++I + M
Sbjct: 658 ACNSMIGLFADLGLVSEAKLAFENLREMGRA-DAISYATIMYLYKGVGLIDEAIEIAEEM 716
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ D V+Y + + + + L EM ++ PN T+ L + G
Sbjct: 717 KLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFKVLFTILKKGGIP 776
Query: 635 HE-VQQCLAVYQD 646
E V Q + YQ+
Sbjct: 777 TEAVAQLESSYQE 789
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 118/557 (21%), Positives = 205/557 (36%), Gaps = 100/557 (17%)
Query: 169 GEVEMFVGLMEVLEEFRLPVK-----ELDEEFR--IVQLCVNK------PDV-----NLA 210
G VEM+VG +V + F L K E+ R I+ + K DV NLA
Sbjct: 416 GIVEMYVGEGDVDKAFDLLKKFQVNGEMSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLA 475
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYI----------- 258
R + D+L CN ++ +GK + A+ + K H + PN
Sbjct: 476 GR------KRDVLECNVMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGA 529
Query: 259 ---------------------CRTIIDVCGI---CGDYMKSRAIYEDLRSQNVTLNIYVF 294
C+T V G G + ++++++ V N V+
Sbjct: 530 DLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVY 589
Query: 295 NSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
SL+N A L+ L+ + M++ G+ +++ LLK+ C GN A+ IY +K+
Sbjct: 590 GSLINGFAEHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKN 649
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E LD+ ++++ +FAD A E++ G + I++++++ G
Sbjct: 650 MEGG----LDLVACNSMIGLFADLGLVSEAKLAFENLREMG-RADAISYATIMYLYKGVG 704
Query: 413 LVEQAMHLFEEMLQAGC--------------EPNSQC--CNILLQACVEA------CQFD 450
L+++A+ + EEM +G N Q C L+ + F
Sbjct: 705 LIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFK 764
Query: 451 RAFRLFRSWTLSKTQVA-LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
F + + + VA L Y S+ N S + +
Sbjct: 765 VLFTILKKGGIPTEAVAQLESSYQEGKPYARQTTFTALYSLVGMHNLALESAQTFIESEV 824
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ I D + + +MR L P+ +++ L+ G +G VEG Q
Sbjct: 825 DLDSSAFNVAIYAYGSAGDINKALNIYMKMRDEHLGPDLVTYIYLVGCYGKAGMVEGVKQ 884
Query: 570 ILKIMREDGMSPD---VVAYTTAIKVCVRSKRLKQAFS-----LFEEMKHYQIQPNLVTY 621
I + + + A A K+C R K L + S F +H +I+ Y
Sbjct: 885 IYSQLEYGEIESNESLFKAIIDAYKICNR-KDLAELVSQEMKFTFNSKEHSEIESE-TEY 942
Query: 622 ITLLRARSRYGSLHEVQ 638
T A GS E +
Sbjct: 943 ATGSEAEYEVGSEDEYE 959
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 57/357 (15%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N ++ ++V + ++K G D+ +YN ++ C A A ++ +K K +
Sbjct: 124 NMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMK----KRGFE 178
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+ ++ F +AL+V + +L P IT++ LI A G +++AM L
Sbjct: 179 PDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKL 238
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+EML G P+ N+++ + DRAF +SK G
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR--ISKNGCVAG----------- 285
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+TYNIL++ + + + LM++
Sbjct: 286 ----------------------------------VSTYNILLRDLLNEGKWEYGEKLMSD 311
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN I+++ LI A G ++ A +LK+M+E ++PD +Y I R +
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ A ++M P++++Y ++L + + G+ E L +++ + + G N
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEA---LNIFEKLGEVGCPPN 425
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 184/489 (37%), Gaps = 94/489 (19%)
Query: 192 DEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
DE +Q VN KPDV IL ++ F + + A++ + +
Sbjct: 94 DESLYFLQHMVNRGYKPDV--------------ILCTKLIKGFFNMKKIEKAIQVMEILE 139
Query: 249 KHLSSPNMYICRTIIDVCGICG-----------DYMKSRAIYEDLRSQNV---------- 287
KH P+++ +I G C D MK R D+ + N+
Sbjct: 140 KH-GKPDVFAYNAVIS--GFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 288 -TLNIYVFNSLMNVNAHDLKFT-----------------LEVYKNMQKLGVMADMASYNI 329
L + V + L+ N T +++ M G+ D +YN+
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G A E + +K V TY+ +++ + W+ K+ DM
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRI----SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G PN IT+S+LI A G +++A ++ + M + P+ + L+ A +
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372
Query: 450 DRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
D A LS + +GN D N+ K + P
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE--VGCP------- 423
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
P +YN L A + +++AL + EM + G+ P+ I++ LI
Sbjct: 424 -----------PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLC 472
Query: 560 GSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G V+ A+++L M E + P V++Y T + + +R+ A + M + PN
Sbjct: 473 RDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNE 532
Query: 619 VTYITLLRA 627
TY L++
Sbjct: 533 TTYTLLIQG 541
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 512 KPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP YN ++ C D+ +++ M+ G P+ +++ ILI G G ++ A
Sbjct: 143 KPDVFAYNAVISGFCKADRVDH--ASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L+++ + +D P V+ YT I+ + + +A L +EM ++P+ TY ++
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 628 RSRYGSLHEVQQCLA-VYQDMWKAGYKANDTYLKELIEE 665
+ G L + L+ + ++ AG + L++L+ E
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNE 299
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 192/459 (41%), Gaps = 60/459 (13%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+C R+ NF+ E GK ++ S + P++ T++ + +
Sbjct: 9 SCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHK---PSLISYTTLLAALTMQKRFD 65
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+I + + + FN+++N + +++ +E + MQ+ G+ ++YN L+
Sbjct: 66 SIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLI 125
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K +AG +E ++ + +G +K ++ TY+ +V+ + + K A V M++
Sbjct: 126 KGYGIAGK---PEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIA 182
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ P+ +T++++ A A G ++QA + EM G +PN + C I++ + +
Sbjct: 183 SGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A R ++ K
Sbjct: 243 ALR-----------------------------------------------FAYRMKELGI 255
Query: 512 KPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +N L+K D V ++N M G+ P+ I+++ +++A +G +E +
Sbjct: 256 HPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCRE 315
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I M + G+ PD AY+ K VR++ ++A L M QPN+V + T++ S
Sbjct: 316 IFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVI---S 372
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ S ++ + V+ M + G N + LI + E
Sbjct: 373 GWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAE 411
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 265 VCGIC-GDYMKSRAIYEDLR------SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
CGI Y K I E LR + N+ +FNSL+ V D EV M
Sbjct: 226 TCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLM 285
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV D+ +++ ++ A AG +EI+ ++ K ++ D YS + K +
Sbjct: 286 EEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDM----VKAGIEPDAHAYSILAKGYVR 341
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + A ++ M+ +G PN + ++++I+ +AG ++ A+ +F++M Q G PN +
Sbjct: 342 AQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKT 401
Query: 436 CNILLQACVEACQ 448
L+ EA Q
Sbjct: 402 FETLIWGFAEARQ 414
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 192 DEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
+E ++++L + +V +R ++ RA +CN KKR A++ K +
Sbjct: 135 EESVKLLELMSQEGNVKPNLRTYNVLVRA---WCN------KKR----ITEAWNVVYKMI 181
Query: 252 SS---PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LK 306
+S P++ TI G ++ + ++++ V N +M+ + ++
Sbjct: 182 ASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIR 241
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L M++LG+ ++ +N L+K ++ ++ EV +L + +K DV T+
Sbjct: 242 EALRFAYRMKELGIHPNLVIFNSLIKGFV----AIMDRDGVDEVLNLMEEFGVKPDVITF 297
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
STI+ ++ A + + ++ +DM+ AG+ P+ +S L A E+A L M++
Sbjct: 298 STIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIK 357
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+G +PN ++ A + D A R+F
Sbjct: 358 SGFQPNVVIFTTVISGWCSAGKMDYAVRVF 387
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 178/435 (40%), Gaps = 64/435 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------LAQ 344
+FNSL++ + D + ++ K M+K YNIL+ + C G LA+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439
Query: 345 EIYGEVKHLEAKGVLK---------------------------------LDVFTYSTIVK 371
+ Y E+ L A VL D TYS ++
Sbjct: 440 KAYNEM--LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A + ++M GV P+ T++ LI+ + AG+++QA + +EM++ GCEP
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY--DGNTDRISNM 482
L+ A ++A + A LF ++K T AL + Y GN ++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEM 539
+ + + P+ Y + KP TY L+ C ++VK L+ M
Sbjct: 617 -YARMRGDADIPDV---DMYFKIKNNVAEKPNVVTYGALVDGLCKA-HKVKDARDLLETM 671
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN I + LID + ++ A ++ M E G +P+V Y++ I + KRL
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 731
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ +M PN+V Y ++ S+ E + + + M + G K N
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM---MEEKGCKPNVVTY 788
Query: 660 KELIEEWCEGVIQDK 674
+I+ + + DK
Sbjct: 789 TAMIDGFGKAGKVDK 803
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 141/369 (38%), Gaps = 62/369 (16%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N L NV LE ++ G +YN L++ A AQ ++ E+ L
Sbjct: 219 NGLWNV-------ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAG 412
L +D FT + W+ AL + KED + PNTI ++ +I+ A
Sbjct: 272 ----LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEAS 322
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSK 463
E+AM M C PN Q ILL C+ Q R R+ + S+T+
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 464 TQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V +D+ + ME + KP YNI
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKME------------------------KCECKPGYVVYNI 418
Query: 521 LMKACCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
L+ + C+ + + NEM + G N ++ G G E A +++
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G PD Y+ I + R++ AF LF+EMK + P++ TY L+ S+ G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 633 SLHEVQQCL 641
+ + L
Sbjct: 539 IIKQAHNWL 547
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 172/407 (42%), Gaps = 43/407 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ + ++ + ++ ++ NA ++ ++K M+ GV+
Sbjct: 464 LCGF-GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ AG A E+ + + V TY+T++ + AK +A
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEM----VRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ E M++ G PN IT+++LI+ +G +E+A ++ M P+
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD---------- 628
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
D F++ + V G DG + KD + + T FV
Sbjct: 629 ------VDMYFKIKNNVAEKPNVVTYGALVDG---LCKAHKVKDARDLLET-MFVDGC-- 676
Query: 503 SSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P T Y+ L+ C + + ++M G +PN +++ LID
Sbjct: 677 ---------EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFK 727
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
++ L++L M E+ +P++V YT I + + +A+ L M+ +PN+VT
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y ++ +G +V +CL ++++M G N LI C
Sbjct: 788 YTAMIDG---FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 56/401 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++ +++ + + +L++ + A + E+
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G ++ +Y L+ C +GN A +IY ++
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD------------------ 623
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AD M K+K ++ PN +T+ +L++ A V+ A L E M GCEP
Sbjct: 624 --ADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD----- 486
N+ + L+ +A + D A +F + Y DR+ + D
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV-YTYSSLIDRLFKDKRLDLVLKV 737
Query: 487 -KQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
+ + N+ PN V T + L K TD LM M G
Sbjct: 738 LSKMLENSCAPNIVI---------------YTEMIDGLSKVAKTD--EAYKLMLMMEEKG 780
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++T +ID G +G V+ L++ + M G +P+ V YT I C + L +A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQQ 639
+L EEMK ++ +Y ++ R G L EV++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 212/543 (39%), Gaps = 107/543 (19%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M +LG+ D + +A C G + E
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK-------WREAL 296
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K + Y+ ++ +A +++ A+ M S PN T+ L+ C N
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + + M+ GC P+ N L+ A ++ F A++L + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 460 TLSKTQVALGEDYDGN-TDRISNMEHKDKQS---ITNTPNFVPNSH----YSSFDKRF-- 509
+ + G + G T ++ + + S + N N V + + F+K +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C + RV+ L EM+ G+ P+ ++TILID
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLC-NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A L M DG P VV YTT I +++K++ A LFE M PN++
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595
Query: 620 TYITLLR---------------ARSR--------------------------YGSL---- 634
TY L+ AR R YG+L
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGL 655
Query: 635 ---HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ-----------NQGE 680
H+V+ + + M+ G + N LI+ +C+ D+ Q N
Sbjct: 656 CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV 715
Query: 681 VT---LCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRM 734
T L R + L+L+ ++ L+ S A N+ I + GL+KV ++ M
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775
Query: 735 MKE 737
M+E
Sbjct: 776 MEE 778
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 148/381 (38%), Gaps = 46/381 (12%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M G + D ++Y+ ++ C N + + K ++ GV+ DV+TY+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLC---NASRVENAFFLFKEMKGTGVVP-DVYTYTIL 530
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F+ A + A ++M+ G P +T+++LI+A A V A LFE M+ GC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 430 EPNSQCCNILLQACVE------ACQF-------------DRAFRLFRSWTLSKTQVALGE 470
PN L+ + ACQ D F++ + V G
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------S 510
DG + +D PN+ Y + F
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710
Query: 511 FKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P TY+ L+ D V ++++M +PN + +T +ID + A
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ +M E G P+VV YT I ++ ++ + LF EM PN VTY L+
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 629 SRYGSLHEVQQCL-AVYQDMW 648
G L E L + Q W
Sbjct: 831 CATGHLDEAYALLEEMKQTYW 851
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 26/256 (10%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI C GL A+ + G +P N L+Q + A + D A + R +
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
LS + LG + ++ + ++ S+ +FVPN T YN
Sbjct: 272 LSMDEFTLGF-FAQALCKVG--KWREALSLIEKEDFVPN---------------TILYNK 313
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + +A+ +N MR+ PN ++ IL+ C + +IL +M +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH--- 635
P + + + +S A+ L ++M+ + +P V Y L+ + G L
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 636 EVQQCLAVYQDMWKAG 651
+ Y +M AG
Sbjct: 434 TFELAEKAYNEMLSAG 449
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK + L + +PN +I+ C G ++ A+ E+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ ++ + ++ + +L + + ++K G + Y +L+ AG
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 905
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+A E++ EV K ++ Y++++ F+ A A ++ DM+ GV P+ T+
Sbjct: 906 VALELHKEVISASMSMAAKKNL--YTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963
Query: 402 SSLINACANAGLVEQAMHLFEEMLQ 426
L+ E+A+ L + + Q
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 197/462 (42%), Gaps = 52/462 (11%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
EF K R L++ + S P+ T+I GD + +++++R + V
Sbjct: 163 EFEKGRGLLTWMWGAGMS------PDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEP 216
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ +N +++ D E+++ + ++ V + SYN+++ C G EI
Sbjct: 217 DVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEI 276
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ +K E K D+FTYS ++ ++A A KV E+M+ GV P+ +T ++++N
Sbjct: 277 WERMKKNERK----CDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLN 332
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ- 465
AG VE+ L+EEM + N + NI L+ E + D A L+ + +
Sbjct: 333 GLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSAT 391
Query: 466 ---VALGEDYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
V G ++G +R + E + ++ + F Y+
Sbjct: 392 YGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEF--------------------AYSS 431
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A C + ++ M G N +LID ++ A+++ + M G
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE-- 636
S VV+Y I +R++R ++A+ EM +P+++TY TL+ G L+E
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLI------GGLYESN 545
Query: 637 -VQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+ L ++ G+K + +I C G ++D Q
Sbjct: 546 MMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQ 587
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 186/456 (40%), Gaps = 63/456 (13%)
Query: 231 FGKKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
F K+ D V A ++ ++ L P++ +I CG + + I+E ++
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC 287
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +++L++ A DL +VY+ M GV D+ + N +L C AGN E++
Sbjct: 288 DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELW 347
Query: 348 GEVKHLEAK--------------------------GVLKLDVFTYSTIVKVFADAKWWQM 381
E+ + G+L+ D TY +V +
Sbjct: 348 EEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNR 407
Query: 382 ALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL+V E+ G+ + +SSLINA G +++A + E M + GC+ NS CN+L
Sbjct: 408 ALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVL 467
Query: 440 LQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ V+ + D A ++FR S+ + + E + D ++ M K
Sbjct: 468 IDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGW 527
Query: 488 QSITNTPNFVPNSHYSS--FDKRFSF---------KPTTTTYNILMKACCT-----DYYR 531
+ T + + Y S D KP YNI++ C+ D +
Sbjct: 528 KPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQ 587
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + + + + V L ++ +++ GN E A +I + ED + PD+++Y +K
Sbjct: 588 LYSTLRQKKCVNL----VTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLK 643
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R+ A ++ P +T+ L+RA
Sbjct: 644 GLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRA 679
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 51/238 (21%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+L+ A A + +A+H+F+ M GC P + N LL A VE+ Q+ RA F+ +
Sbjct: 82 TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
++ P TYN+L
Sbjct: 142 ARVS-----------------------------------------------PNVETYNVL 154
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
MK C ++ + + L+ M G+SP+ I++ LI SG++ AL++ MRE G+
Sbjct: 155 MKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGV 214
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDVV Y I + +A ++E ++ + P++V+Y ++ + G E
Sbjct: 215 EPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSE 272
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 134/323 (41%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L V++ M + G + S+N LL A + A+ + K+ EA V +V TY
Sbjct: 96 ALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFF---KYFEAARV-SPNVETY 151
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++KV ++ + M AG++P+ IT+ +LI A +G + A+ +F+EM +
Sbjct: 152 NVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRE 211
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP+ C N+++ + F +A ++ L + ++
Sbjct: 212 RGVEPDVVCYNMIIDGFFKRGDFVKAGEMWER--LLREELVF------------------ 251
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
P+ +YN+++ C + + M+
Sbjct: 252 --------------------------PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNER 285
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI +G++ GA ++ + M G+ PDVV + ++ +++ F
Sbjct: 286 KCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFE 345
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L+EEM ++ N+ +Y L+
Sbjct: 346 LWEEMGKCSLR-NVRSYNIFLKG 367
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 136/306 (44%), Gaps = 32/306 (10%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
LK DV Y+ I++ F AL++ E M P + T+ +I+A A AG + +A+
Sbjct: 27 LKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIRKAL 86
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALGEDY 472
+F+ M ++GC P Q N L+ VE Q D+A + L+ +T + + Y
Sbjct: 87 DVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIMDGY 146
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D E Y S K + TY L+KACC R+
Sbjct: 147 ASLGDTGKAFE------------------YFSRIKDEGLELDVYTYEALLKACCKS-GRI 187
Query: 533 K---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ A+ EM + N + ILID +V A +++ MR++G+ PD+ YT+
Sbjct: 188 ESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEGVQPDIHTYTSF 247
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ C ++ +++A + +EMK + P L L + SL E + L +++M K
Sbjct: 248 VNACCKAGDMQKAMNTIQEMKRVGLNPMLKP--IPLSYTVGHASLPE--KALKCFEEMKK 303
Query: 650 AGYKAN 655
+G K +
Sbjct: 304 SGLKPD 309
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ ALR + KK P II G K+ +++
Sbjct: 32 VLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIRKALDVFDM 91
Query: 282 LRSQNVTLNIYVFNSLM----------------------NVNAHDLKFT----------- 308
+R + +N+L+ + ++ +T
Sbjct: 92 MRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIMDGYASLGD 151
Query: 309 ----LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
E + ++ G+ D+ +Y LLKACC +G A + K + AK + + + F
Sbjct: 152 TGKAFEYFSRIKDEGLELDVYTYEALLKACCKSGRIESALAV---TKEMNAKNIPR-NTF 207
Query: 365 TYSTIVKVFA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+ ++ +A + W+ A + + M GV P+ T++S +NAC AG +++AM+ +E
Sbjct: 208 VYNILIDGWARRSDVWEAA-DLMQQMRQEGVQPDIHTYTSFVNACCKAGDMQKAMNTIQE 266
Query: 424 MLQAGCEP 431
M + G P
Sbjct: 267 MKRVGLNP 274
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVY 312
++Y ++ C G + A+ +++ ++N+ N +V+N L++ A D+ ++
Sbjct: 170 DVYTYEALLKACCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLM 229
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M++ GV D+ +Y + ACC AG+ A E+K + +LK +Y+
Sbjct: 230 QQMRQEGVQPDIHTYTSFVNACCKAGDMQKAMNTIQEMKRVGLNPMLKPIPLSYTV---- 285
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ-----AMH-LFEEMLQ 426
A + ALK E+M +G+ P+ + L+ + + V + +H + EEM++
Sbjct: 286 -GHASLPEKALKCFEEMKKSGLKPDKAVYHCLMTSLLSRATVAEDYIITGIHRVCEEMVE 344
Query: 427 AG 428
+G
Sbjct: 345 SG 346
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ A+ ++ GL P+ + + +I A G GN++ AL+I++ M+++ P +
Sbjct: 11 DWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFM 70
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ +++A +F+ M+ P + TY L+ ++ + + V +M
Sbjct: 71 PIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEK---RQMDKAVEVVDEM 127
Query: 648 WKAGYKAND 656
AG + N+
Sbjct: 128 LLAGIRPNE 136
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 33/349 (9%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 263 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLI 318
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG E
Sbjct: 319 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 378
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEH 484
P+ N L++A + RA + + + +G + D + I H
Sbjct: 379 PDVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 432
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
+D Q++ KR PT ++ +L+ A + + ++N+M
Sbjct: 433 EDAQAVFEVM------------KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 480
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 481 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 540
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 541 EELFRSLPARNLIPDVVTWTSRIGAYSR---RKQYNRCLEVFEEMIDAG 586
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV Y+ ++ + ++ A ++L A P T++ L+ A +GL+E+A +F
Sbjct: 205 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 264
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G P++ N + ++ +A +F + Q + + N
Sbjct: 265 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-----TATYTMLIN 319
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K +S F H K KP T+ L+ A + KA + ++
Sbjct: 320 LYGKASKSYMALKVF----HEMRSQK---CKPNICTFTALVNAFAREGLCEKAEEIFEQL 372
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL P+ ++ L++A +G GA +I +M+ G PD +Y + R+
Sbjct: 373 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 432
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ A ++FE MK I P + +++ LL A SR G +V +C + M K+G K + L
Sbjct: 433 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG---KVAKCEEIVNQMHKSGIKPDTFVL 489
Query: 660 KELI 663
++
Sbjct: 490 NSML 493
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 25/314 (7%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 153 SNRIWGSLDSLSPNHTTWDDIINVA--VQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 210
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 211 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 270
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ V DG M+ D Q + KR +P+T TY
Sbjct: 271 GFPPSAVVYNAYIDG------LMKGGDTQKAVEIFERM---------KRDRCQPSTATYT 315
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ + Y + +EMR+ PN ++T L++A G E A +I + ++E
Sbjct: 316 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 375
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LHE
Sbjct: 376 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHED 434
Query: 638 QQCLAVYQDMWKAG 651
Q AV++ M + G
Sbjct: 435 AQ--AVFEVMKRLG 446
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 273 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 332
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 333 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 392
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 393 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 448
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 449 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM--- 505
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----YSSFDKRFS 510
+ ++ ME + +T N + N + ++ ++ F
Sbjct: 506 --------------------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Query: 511 FKPT--------TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T T I + Y R + EM G P+ + +L+ AC
Sbjct: 546 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 605
Query: 563 NVEGALQILKIMRED 577
++ +++ M +D
Sbjct: 606 QIQEVTTVIRTMHKD 620
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY +L+KA CT + +A+ EMR G P+ + + ID G+ + A++I
Sbjct: 239 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 298
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+ D P YT I + ++ + A +F EM+ + +PN+ T+ L+ A +R
Sbjct: 299 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR 358
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G + ++ +++ + +AG + + L+E +
Sbjct: 359 EGLCEKAEE---IFEQLQEAGLEPDVYAYNALMEAY 391
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 177/428 (41%), Gaps = 43/428 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + T++ G GD K ++ ++R + + N+ ++NS+++ L V
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M G D +++ L+ C G A+ + E E L ++ +Y++++
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWE----LNPNLSSYTSLIH 442
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +A + +M+ G TP+ +T+ +LI+ AG V +A+ + E+M P
Sbjct: 443 GFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLP 502
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ N+L+ L + L + + E + N H DK T
Sbjct: 503 DANIYNVLISG------------LCKKKMLPAARNLIEEMLEQNV-------HPDKYVYT 543
Query: 492 N-TPNFVPNSHYSSFDKRFSF------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
F+ N K F F P YN ++K C +A+ M+ MR V
Sbjct: 544 TLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV 603
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++T LI GN+ GAL +L M + P+VVAY++ I + A
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA 663
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL---HEVQQCLAVYQDMWKAGYKANDTYL 659
LF M+ + PN++TY L+ GSL +V + ++ M ND L
Sbjct: 664 ECLFGSMESQGLFPNVITYTILI------GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTL 717
Query: 660 KELIEEWC 667
L+ C
Sbjct: 718 HSLVTGLC 725
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN+L+ C D R L+ EM GL P +++ L+ G G++E +
Sbjct: 292 PNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASL 351
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L MRE + P+V Y + I + + QA + ++M P+ +T+ TL+ +
Sbjct: 352 LSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQ 411
Query: 631 YGSLHEVQQCL 641
G + E ++ L
Sbjct: 412 EGRVQEAERLL 422
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN + + +LID G+V + +L M G+ P VV Y T + R L++
Sbjct: 288 AGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEK 347
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
SL EM+ ++ PN+ Y +++ A + S Q L V + M+ G +
Sbjct: 348 IASLLSEMRERRLPPNVQIYNSVIDALCKCRS---ASQALVVLKQMFAGGCDPDAITFST 404
Query: 662 LIEEWC-EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDL--RG 718
LI C EG +Q+ + E T + + L+ V + A NL +++ RG
Sbjct: 405 LISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464
Query: 719 LT 720
T
Sbjct: 465 HT 466
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 166/417 (39%), Gaps = 106/417 (25%)
Query: 227 FVREFGKKRDLVSALRAYDA--SKKHLSSP---------NMYICRTIIDVCGICGDYMKS 275
F++E R ++ ++ S +++ P +++I +++ G C M
Sbjct: 151 FLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTR 210
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ RS N L L DL + + +++M G+ + +YNI++ C
Sbjct: 211 FRVFPKARSCNAFLY-----RLAKTGKGDL--SNKFFRDMVGAGIAQSVFTYNIMIGYMC 263
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ V A+ ++ ++K + G+T
Sbjct: 264 KEGDMVTAKSLFHQMKQM---------------------------------------GLT 284
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T++SLI+ GL++++ LFEEM GCEP+ N L+ + Q +AF
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
H+ K S KP
Sbjct: 345 L---------------------------HEMKNS--------------------GLKPNV 357
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+ L+ A C ++ +A+ + +MR VGLSPN ++T LIDA +G + AL++
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M + + +VV YTT + + R+ +A LF M + PNL TY L+ +
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIK 474
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 36/368 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
GD + +++++ ++ +T +I +NSL++ + D F L ++ M+ +G D+
Sbjct: 266 GDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCL--FEEMKDVGCEPDVI 323
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A E+K+ LK +V TYST++ Q A+K
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKN----SGLKPNVVTYSTLIDALCKEHMLQQAIKF 379
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G++PN T++SLI+A AG + A+ L +EMLQ N LL +
Sbjct: 380 LLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCK 439
Query: 446 ACQFDRAFRLFRSWTLS------KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A LFR+ + KT AL + N R+ N K+
Sbjct: 440 EGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK-RVENALELLKEIKEKKI----- 493
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
KP Y ++ C+ + +M+EM+ G+ N + +TI +DA
Sbjct: 494 ------------KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDA 541
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G AL +L+ M + G+ +V + I + +++A F M + +QPN
Sbjct: 542 YFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN 601
Query: 618 LVTYITLL 625
V T L
Sbjct: 602 NVAVCTAL 609
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C D K+L ++M+ +GL+P+ +++ LID G G ++ + + + M
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ G PDV+ Y I + +++ +AF EMK+ ++PN+VTY TL+ A +
Sbjct: 314 KDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKE--- 370
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
H +QQ + DM + G N+ LI+ C+ G + D
Sbjct: 371 HMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSD 410
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + G++E+A F M + P ++ CN L + + D + +
Sbjct: 179 VPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNK 238
Query: 455 LFR-------SWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSF 505
FR + ++ + +G +G+ ++ H+ KQ + TP+ V NS +
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQ-MGLTPDIVTYNSLIDGY 297
Query: 506 ------DKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
D+ F +P TYN L+ C KA ++EM+ GL PN
Sbjct: 298 GKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNV 357
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LIDA ++ A++ L MR G+SP+ YT+ I ++ L A L +E
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M Q+ N+VTY TLL + G + E + +++ M KAG N
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAED---LFRAMIKAGVTPN 461
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 29/415 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVT 288
F K + A K PN+ T+ID +C ++M +AI D+R ++
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID--ALCKEHMLQQAIKFLLDMRRVGLS 389
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N + + SL++ N A L L++ M ++ V ++ +Y LL C G + A+++
Sbjct: 390 PNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDL 449
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + LK TY+ +V K + AL++ +++ + P+ + + ++I
Sbjct: 450 FRAMIKAGVTPNLK----TYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIW 505
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSK 463
+ +E+ + EM G NS I + A + + A L + +
Sbjct: 506 GLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEV 565
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T V DG + E D + N PN+ L+
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN--------------VAVCTALID 611
Query: 524 ACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + Y K L +EM+ + P+ I++T LID + + AL I M E GM
Sbjct: 612 GLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMEL 671
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D+ AYT+ + + ++QA EM I P+ + I LLR GS+ E
Sbjct: 672 DLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDE 726
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 197/434 (45%), Gaps = 32/434 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L CN +E AL + A +K +P Y+CR++I C G + + ++ D+
Sbjct: 336 LKCNLQKE---------ALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDM 386
Query: 283 RSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S V ++ +++NV+ D+K E++++++ D+ +YN+++ G
Sbjct: 387 QSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMH 446
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A IY K +E + L D +TY +++++ A ++ + ++ V + +
Sbjct: 447 EEAFRIY---KLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVM 503
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ ++N CA +E+ +F+EM+ GC PN+ N+++ ++ DRA R +
Sbjct: 504 CNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRA----RDAS 559
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
Q+ + + +T S + +D +++ T + N+ + S + +
Sbjct: 560 KLAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGG-----SLEAYNCVLDA 614
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA D +++ ++ M GL + S+ ILI+ G + + M+E+G
Sbjct: 615 YGKAGHLD--KLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFI 672
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD Y T I+ + +A F+ M+ I P+ VTY+ L+ A + G+L E
Sbjct: 673 PDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLE---- 728
Query: 641 LAVYQDMW--KAGY 652
A +W +AGY
Sbjct: 729 -AARWSLWMTQAGY 741
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 20/302 (6%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ G + +V++Y+ + K+ + W + ++ ML G P+ T+++LI + + A
Sbjct: 1 MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKAD 60
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV-ALGED 471
+ A F+ ML+ G +P ++++ + + + A F S QV A
Sbjct: 61 YADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSA 120
Query: 472 YDGNTDRISNMEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
R E +K + + N P+ R ++ TY K
Sbjct: 121 MIAIYTRCGFFEKAEKIMEDMWN-HKIAPD--------RDNWLKQMNTYGQQGKI----- 166
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ +M+ M +G+ + + +I A G +G E AL++ + M+E G+ PD V Y+
Sbjct: 167 EEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCM 226
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I C R+ +L+ A F+ MK I P + TL+ S YG V + V DM
Sbjct: 227 IGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLI---SLYGKARNVVGIVRVLADMKN 283
Query: 650 AG 651
G
Sbjct: 284 FG 285
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 50/342 (14%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ L V Y++++ + A ++ AL++ E M AG+ P+ +T+S +I AC AG + A+
Sbjct: 181 MHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDAL 240
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL------FRSWTLSKTQVALGEDY 472
F+ M + G P S N L+ +A R+ F S+T A+ Y
Sbjct: 241 DYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAY 300
Query: 473 D--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
+ G T ++ + S+ +V + T +Y L+ C
Sbjct: 301 ERAGQTKKVVQV-----LSLLREAGWVED---------------TESYGTLLHVYLKCNL 340
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
++ + MR G++P LI AC +G E A + + M+ G+ P + T
Sbjct: 341 QKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCT 400
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I V +KQA LF ++ + +++ Y ++ RYG +HE + +Y+
Sbjct: 401 MINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYG-MHE--EAFRIYK--- 454
Query: 649 KAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQ 690
L+EE +G++ D + +C++ N Q
Sbjct: 455 -------------LMEEE-DGLLPDSYTYHSMLRMCQKCNLQ 482
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 193/461 (41%), Gaps = 61/461 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + +GK ALR ++ K+ P+ +I CG G + ++ ++
Sbjct: 188 YNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMK 247
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ FN+L+++ A ++ + V +M+ G D + + +++A AG T
Sbjct: 248 RLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQT- 306
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+++ + L G ++ D +Y T++ V+ + AL V M AG+ P
Sbjct: 307 --KKVVQVLSLLREAGWVE-DTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMC 363
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPN--SQCCNILLQACV-EACQFDRAFRLFRS 458
SLI AC +AG+ E A ++F +M AG P+ + C I + + Q + FR RS
Sbjct: 364 RSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRS 423
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
++SK + + + N M H++ I Y ++ P + TY
Sbjct: 424 -SVSKLDI-IAYNVIINVYMRYGM-HEEAFRI-----------YKLMEEEDGLLPDSYTY 469
Query: 519 NILMKAC--CT-------DYYR----------------------------VKALMNEMRT 541
+ +++ C C Y+R V + EM
Sbjct: 470 HSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMID 529
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
VG PN I++ ++ID G SG ++ A K+ ++ G++ D + ++T I + + +
Sbjct: 530 VGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVA-DKITFSTLINSYGKKQDFRN 588
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ EM++ +L Y +L A + G L +++ +A
Sbjct: 589 MEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIA 629
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 22/336 (6%)
Query: 315 MQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ G ++ SYNI+ K + E+ G+ + G + D +T++T++
Sbjct: 1 MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQ---MLGDGCVP-DDYTFNTLIMSA 56
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + A + + ML GV P +T+S ++ G VE A F MLQ+G + +
Sbjct: 57 SKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVA 116
Query: 434 QCCNILLQACVEACQF-DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
++ A C F ++A ++ + ++A D + + M +Q
Sbjct: 117 AYSAMI--AIYTRCGFFEKAEKIMED--MWNHKIAPDRD-----NWLKQMNTYGQQGKIE 167
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+ ++ +R YN ++ A Y + L +M+ GL P+ ++
Sbjct: 168 EAEHIMDTM-----ERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVT 222
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ +I ACG +G + AL + M+ G+ P + T I + +++ + + +MK
Sbjct: 223 YSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMK 282
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ P+ T ++RA R G +V Q L++ ++
Sbjct: 283 NFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLRE 318
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 151/364 (41%), Gaps = 24/364 (6%)
Query: 292 YVFNSL-MNVNAHDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y FN+L M+ + D + ++ M + GV +Y++++ G A+ +
Sbjct: 47 YTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAF-- 104
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
H+ G+ V YS ++ ++ +++ A K+ EDM + + P+ W +N
Sbjct: 105 -SHMLQSGIQV--VAAYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYG 161
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G +E+A H+ + M + G N ++ A +A +++A RLF + L
Sbjct: 162 QQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFE----KMKEAGLE 217
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCT 527
D + I + Y KR P ++ +N L+
Sbjct: 218 PDEVTYSCMIG--------ACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKAR 269
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + ++ +M+ G +P+ + ++ A +G + +Q+L ++RE G D +Y
Sbjct: 270 NVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYG 329
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + V ++ K+A S+F M+ + P +L+ A G + V++DM
Sbjct: 330 TLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATN---VFRDM 386
Query: 648 WKAG 651
AG
Sbjct: 387 QSAG 390
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 148/334 (44%), Gaps = 21/334 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ +++K+G+ ++ Y L+ CC G+ A+ ++ ++ + L + +TY+
Sbjct: 172 FELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVN----LVANQYTYTV 227
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ++ E M GV PN T++ +IN N G + +A LF+EM + G
Sbjct: 228 LINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRG 287
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N N L+ + A +L + + + G ++ TD + ME +
Sbjct: 288 VVSNVVTYNTLISGLCRKTRIWEAEKLVDQ--MKRAGYSNGGNWVDVTDLVREMEERGIS 345
Query: 489 SITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
T + N+H YSS +K P Y +L+ C +
Sbjct: 346 PSKVTYTILTNAHVRLGDMEKAFHFYSSMEK-VGLVPDVHIYGVLLHGLCVKGNMKEASK 404
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M + L PN + + +I+ +GN AL+ LK M + + P+V +Y++ I +
Sbjct: 405 LFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILC 464
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ + ++A L +M+ ++P++ Y + +A+
Sbjct: 465 KDGKWQEAEILLNKMRGSGLEPSVSIYNIISKAK 498
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG ++LDV+TY ++K +A + ++ D+ G++PN + +++LI+ C G
Sbjct: 143 EVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGD 202
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V +A LF +M + N +L+ + F LF L L Y+
Sbjct: 203 VRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNL-YTYN 261
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACC----- 526
+ N E K ++ Y FD+ + TYN L+ C
Sbjct: 262 CMINEFCN-EGKLHKA------------YELFDEMCKRGVVSNVVTYNTLISGLCRKTRI 308
Query: 527 ------------------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
++ V L+ EM G+SP+ +++TIL +A G++E A
Sbjct: 309 WEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAF 368
Query: 569 QILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M + G+ PDV Y + +CV+ +K+A LF M +++PN V Y T++
Sbjct: 369 HFYSSMEKVGLVPDVHIYGVLLHGLCVKG-NMKEASKLFRSMAEMKLEPNEVVYNTMING 427
Query: 628 RSRYGSLHEVQQCLAVYQD 646
+ G+ + L +D
Sbjct: 428 YCKAGNSFRALRFLKEMED 446
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 136/364 (37%), Gaps = 76/364 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD +++ ++ + N+ N Y + L+N K E
Sbjct: 184 SPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFE 243
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ MQ GV ++ +YN ++ C G A E++ E + +GV+ +V TY+T++
Sbjct: 244 LFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDE---MCKRGVVS-NVVTYNTLI 299
Query: 371 K---------------------VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+++ W + +M G++P+ +T++ L NA
Sbjct: 300 SGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHV 359
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G +E+A H + M + G P+ +LL A +LFRS K +
Sbjct: 360 RLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLE---- 415
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
P YN ++ C
Sbjct: 416 -------------------------------------------PNEVVYNTMINGYCKAG 432
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ +R + EM L PN S++ I G + A +L MR G+ P V Y
Sbjct: 433 NSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYN 492
Query: 588 TAIK 591
K
Sbjct: 493 IISK 496
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY I++K CC +Y+ L+ ++ +GLSPN + +T LID C +G+V A + M
Sbjct: 154 TYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKM 213
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E + + YT I + K F LFE+M+ + PNL TY ++ G L
Sbjct: 214 GEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKL 273
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
H+ + ++ +M K G +N LI C
Sbjct: 274 HKAYE---LFDEMCKRGVVSNVVTYNTLISGLC 303
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 136/335 (40%), Gaps = 60/335 (17%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K+ Y +I+ V+ + ++A+ M+ G+ +++L+++ + E+
Sbjct: 80 KISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWF 139
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F E ++ E + I+++ C EA F + F L +
Sbjct: 140 VFNE-VKGKIELDVYTYGIMIKGCCEAGVFYKGFEL-----------------------L 175
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
+++E + P Y L+ CC D R K L N
Sbjct: 176 TDLE------------------------KMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFN 211
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M V L N ++T+LI+ G + ++ + M+ DG+ P++ Y I
Sbjct: 212 KMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEG 271
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+L +A+ LF+EM + N+VTY TL+ R + E ++ + M +AGY
Sbjct: 272 KLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLV---DQMKRAGYSNGGN 328
Query: 658 Y--LKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQ 690
+ + +L+ E ++++ + +VT TN+
Sbjct: 329 WVDVTDLVRE-----MEERGISPSKVTYTILTNAH 358
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 53/360 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV+ + N ++K C A+ I V+ + G+ D+FTYS I+
Sbjct: 212 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI---VQKMVDSGIAP-DLFTYSLII 267
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+K A +V E M+ AG PN+IT++SLI+ + +G+ +++ +F++M G
Sbjct: 268 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 327
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P CN + A + + + A +F S L +
Sbjct: 328 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK------------------------- 362
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P+ + S+ Y +C D + + N M T G++PN
Sbjct: 363 ---PDII------------SYSTMLHGYATATDSCLADVHNI---FNLMLTKGIAPNKHV 404
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILI+A G ++ A+ I + M+ GM PD V + T I R RL A F M
Sbjct: 405 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 464
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKANDTYLKELIEEWCE 668
+ P+ Y L++ +G L + ++ ++ + +D+ G K Y +I C+
Sbjct: 465 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK----YFSSIINNLCK 520
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 166/415 (40%), Gaps = 57/415 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN ++ +I+ CG K+ I+ED++++ + + F ++++ L L
Sbjct: 399 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 458
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M +GV A Y L++ CC G V A+E+ E+ + K + V +S+I+
Sbjct: 459 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN---KDIPPPGVKYFSSII 515
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + M+ G PN +T++SL+ G +E+A L + M G E
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 575
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A +FR +M HK
Sbjct: 576 PNCYIYGTLVDGYCKNGRIDDALTVFR-----------------------DMLHK----- 607
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
KPT+ Y+I++ K + +EM G + +
Sbjct: 608 -------------------GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 648
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +++ + + A +L+ + + D++ + I + R ++A LF+
Sbjct: 649 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 708
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ Y + PN+ TY ++ + S E ++ + K+G+ ++ L ++
Sbjct: 709 ISTYGLVPNIQTYSMMITNLIKEESYEEADN---LFISVEKSGHASDSRLLNHIV 760
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 513 PTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYNIL+ Y RV A++ + GL P+ S++ LI G V+
Sbjct: 154 PTIHTYNILIDC----YRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 208
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E G+ P ++ + IK + K + +A S+ ++M I P+L TY ++
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ ++ + ++ V + M +AG + N LI +
Sbjct: 269 GLCKSKAMDKAER---VLEQMVEAGTRPNSITYNSLIHGY 305
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM G+ P + +I ++ A I++ M + G++PD+ Y+ I
Sbjct: 208 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 267
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+SK + +A + E+M +PN +TY +L+ S G +E + V++ M
Sbjct: 268 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE---SVRVFKQMSSC 324
Query: 651 G 651
G
Sbjct: 325 G 325
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/232 (17%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++++ + G+ ++ A+ + + S + N Y++ +L++ + + L V
Sbjct: 541 PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 600
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY------GEVKHLEAKGVL------ 359
+++M GV Y+I+L A T A++++ G + GV+
Sbjct: 601 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR 660
Query: 360 -------------------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K D+ T++ ++ Q A ++ + + + G+ PN T
Sbjct: 661 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQT 720
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+S +I E+A +LF + ++G +S+ N +++ + + +A
Sbjct: 721 YSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 189/454 (41%), Gaps = 80/454 (17%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
++ +K + V + M G++ D ASY L+ C GN A ++ V+ +E G
Sbjct: 110 SNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQL---VEKMEDSGY-PA 165
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ TY+T+VK +L+ + ++ G+ PN T+SSL+ A V +AM L
Sbjct: 166 NTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLL 225
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+E++ G +PN N+LL + + + A RLF+ N
Sbjct: 226 DEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFK-----------------------N 262
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ K F P +YNIL+++ C + + L+ EM
Sbjct: 263 LPSK------------------------GFSPNVVSYNILLRSLCYEGRWEEANELLAEM 298
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
SP+ +++ ILI + G +E ALQ++ M P +Y I + ++
Sbjct: 299 NGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKV 358
Query: 600 KQAFSLFEEMKHYQIQPNLVTY--ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+ + ++M + PN T+ I +L + VQ+ ++ Q + G K N +
Sbjct: 359 EAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGK------VQEAFSLIQSL---GNKQNSS 409
Query: 658 YLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
I ++ +GV+ LC++ N+ P LLL ++ + + + +R
Sbjct: 410 -----IHDYYKGVVS---------CLCKKGNTY-PAFLLLYEMTKYGFTPDSYTYSSLIR 454
Query: 718 GLTKVEARIIVLAVLRMMKEN-YSLGTDEFHIML 750
GL + + ++++E+ Y D F+ ++
Sbjct: 455 GLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALI 488
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 130/638 (20%), Positives = 245/638 (38%), Gaps = 128/638 (20%)
Query: 25 HRNKPNKHPVTKLFPLASSSSLSSIPTVHSSQ-----TALLSTVRRDLSSRN------DY 73
H P +P T+ +A S IP +HS T +L++ + +S ++ ++
Sbjct: 6 HSVSPLTNPFTEAARIACGF-FSHIPNLHSFSLNKDFTRVLASTQITISPKDSVITLPNW 64
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSLEMVASGIVKSIREGRIDC 131
+ + +D R+ + +E +V + + +V + +L ++ + K+IR
Sbjct: 65 RSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIR------ 118
Query: 132 VVGVLKKLNELGVAPLELFDGSGFKLLKNE-CQRLLDSGEVEMFVGLMEVLEEFRLPVKE 190
V++ + G+ P D + + L N C+R G V + L+E +E+ P
Sbjct: 119 ---VMEMMISCGIIP----DAASYTFLVNHLCKR----GNVGYAMQLVEKMEDSGYPANT 167
Query: 191 LDEEFRIVQLCVNKPDVNLAIRY------ACIVPRADILFCNFVREFGKKRDLVSALRAY 244
+ + LC++ ++N ++++ +VP A + + + K+R + A+R
Sbjct: 168 VTYNTLVKGLCMHG-NLNKSLQFLDRLMQKGLVPNA-FTYSSLLEAAYKERGVNEAMRLL 225
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D PN+ ++ G+C K I E +R
Sbjct: 226 DEIIAKGGQPNLVSYNVLL--TGLC----KEGRIEEAIR--------------------- 258
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
++KN+ G ++ SYNILL++ C G A E+ E+ E +
Sbjct: 259 ------LFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSP----SIV 308
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ A + AL+V ++M+ P +++ +I G VE ++ ++M
Sbjct: 309 TYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQM 368
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ C PN N + C E + AF L
Sbjct: 369 IFGRCSPNEGTFNAIAVLCYEG-KVQEAFSLI---------------------------- 399
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
QS+ N N + +Y K T Y L+ EM G
Sbjct: 400 ---QSLGNKQNSSIHDYYKGVVSCLCKKGNT--------------YPAFLLLYEMTKYGF 442
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ +++ LI G + A++I K++ ED PD+ + I +S R +
Sbjct: 443 TPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLE 502
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+FE M P+ TY L+ G +HE ++ LA
Sbjct: 503 VFEMMIEKGYTPSETTYTILVE-----GIIHEEEKELA 535
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 55/326 (16%)
Query: 352 HLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
HLE K K DV + ++ + + A++V E M+S G+ P+ +++ L+N
Sbjct: 84 HLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLC 143
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G V AM L E+M +G N+ N L++ +++ +
Sbjct: 144 KRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFL------------- 190
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
DR+ VPN+ TY+ L++A +
Sbjct: 191 -------DRLMQ------------KGLVPNAF---------------TYSSLLEAAYKER 216
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A L++E+ G PN +S+ +L+ G +E A+++ K + G SP+VV+Y
Sbjct: 217 GVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYN 276
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ R ++A L EM + P++VTY L+ + + +G +++Q L V +M
Sbjct: 277 ILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHG---KIEQALQVIDEM 333
Query: 648 WKAGYKANDTYLKELIEEWC-EGVIQ 672
+K T +I C EG ++
Sbjct: 334 MMGPFKPTATSYNPIIARLCKEGKVE 359
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 24/329 (7%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K + + YN L+ C GN A+ + E + KG L V TY++++ +
Sbjct: 253 MTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDE---MIDKG-LTPTVVTYTSLISGYC 308
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ W A KV +M + G++PNT T++++I+ A ++ +A+ LF EM + P+
Sbjct: 309 NEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR--ISNMEHKDKQSITN 492
N++++ + AF L V G D T R IS + + ++
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLL------DEMVGKGFVPDTYTYRPLISGLCSVGR--VSE 420
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHI 549
FV + H + K Y+ L+ C + R K ++ R + G++ + +
Sbjct: 421 AKEFVDDLH------KDHHKLNNMCYSALVHGYCKE-GRFKDAVSACRVMVERGVAMDLV 473
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ILID + +LK M G+ PD V YT I ++ LK+AF L++ M
Sbjct: 474 CYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIM 533
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PN+VTY L+ + G + + +
Sbjct: 534 VDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 187/467 (40%), Gaps = 63/467 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--------------- 298
P++YI ++ D+ K++ + + L+I V+N L+
Sbjct: 129 PDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI 188
Query: 299 -----------NVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NV + KF ++K M + G+ A+ +Y+IL+ + C G E
Sbjct: 189 KNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRG------E 242
Query: 346 IYGEVKHLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + L+ K ++ V+ Y++++ + A ++M+ G+TP +T++S
Sbjct: 243 MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWT 460
LI+ N G +A ++ EM G PN+ ++ A A RLF +
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 461 LSKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ ++V +G+ + IS H + + F P T TY
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGK-----------------GFVPDTYTY 405
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C+ K ++++ N++ ++ L+ G + A+ ++M E
Sbjct: 406 RPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVE 465
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++ D+V Y I R + F L +EM ++ ++P+ V Y ++ S+ G+L E
Sbjct: 466 RGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKE 525
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
++ M G N LI C+ + DK + + TL
Sbjct: 526 A---FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETL 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 162/374 (43%), Gaps = 62/374 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+ Y R +I G+C G +++ +DL + LN +++L++ + +F +
Sbjct: 400 PDTYTYRPLIS--GLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAV 457
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M + GV D+ Y IL+ +T + ++G +K + G L+ D Y+ +
Sbjct: 458 SACRVMVERGVAMDLVCYAILIDGTAREHDT---RALFGLLKEMHNHG-LRPDAVIYTNM 513
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A + A + + M+ G PN +T+++LIN AGL+++A L +E L +
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN C D R GN ++ + H +
Sbjct: 574 TPNH---------ITYGCFLDHLTR------------------GGNMEKAVQLHHAMLKG 606
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
F TT +YNIL++ C L++ M + P+
Sbjct: 607 ---------------------FLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 548 HISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+I++ TI+ + C S N++ A+++ M + G+ PD +AY+ + C + L++AF L
Sbjct: 646 YITYSTIIYEQCKRS-NLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELR 704
Query: 607 EEMKHYQIQPNLVT 620
+EM ++ N VT
Sbjct: 705 DEMIRRGMRSNHVT 718
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 175/420 (41%), Gaps = 46/420 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ ++ V D+ Y+ ++++ C + A+E+ H KL + Y+
Sbjct: 116 LLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMI----HWMEFNQCKLSIVVYNV 171
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ ++ AL++K ++ G+ N +T+ N +A LF+EM + G
Sbjct: 172 LIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFN---------EAELLFKEMGEKG 222
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N +IL+ + + D A T + + + Y N
Sbjct: 223 LCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTV---YPYN------------- 266
Query: 489 SITNTPNFVPNSHYSS--FDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
S+ N + N+ + FD+ PT TY L+ C + +++ + NEM
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SPN ++T +I + + A+++ M+E + P V Y I+ RS + +A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
F L +EM P+ TY L+ G + E ++ + D+ K +K N+ L
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV---DDLHKDHHKLNNMCYSAL 443
Query: 663 IEEWC-EGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLRGLTK 721
+ +C EG +D V+ C R +R ++ L A+ + +A E+ L GL K
Sbjct: 444 VHGYCKEGRFKDA------VSAC-RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/498 (17%), Positives = 196/498 (39%), Gaps = 74/498 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F ++ ++ +A+ D K +Y ++I+ G C G+ ++ +
Sbjct: 228 ITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN--GYCKLGNASAAKYYF 285
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + +T + + SL++ N + +VY M G+ + ++ ++ C A
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRA 345
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++GE+K + ++ +V TY+ +++ + A + ++M+ G P+
Sbjct: 346 NMMAEAIRLFGEMKE---RKIMPSEV-TYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPD 401
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T T+ LI+ + G V +A +++ + + N+ C + L+ + +F A R
Sbjct: 402 TYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACR 461
Query: 458 SWTLSKTQVAL--------GEDYDGNTDRISNM-----EHKDKQSITNTPNFVPNSHYSS 504
+ L G + +T + + H + N + + H +
Sbjct: 462 VMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI-DRHSKA 520
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
+ + +F P TY L+ C KA L E ++PNHI++
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580
Query: 552 TILIDACGGSGNVEGALQI----------------------------------LKIMRED 577
+D GN+E A+Q+ L M ++
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD + Y+T I + L++A L+ M ++P+ + Y L+ G E+
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAG---EL 697
Query: 638 QQCLAVYQDMWKAGYKAN 655
++ + +M + G ++N
Sbjct: 698 EKAFELRDEMIRRGMRSN 715
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR + K +PN C T++D G K+ ++++ ++ + N FN+++N
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E+ M++ D+ +Y L C G+ A I E+++L
Sbjct: 533 GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAP 592
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ +++++ AK + +M + G++PNT+ + +LI G + A
Sbjct: 593 TIEF----FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTA 648
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+L+ EM++ G PN C+ L+ +FD A + ++ TD
Sbjct: 649 YNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV--------------GTD 694
Query: 478 RISNMEHKDKQSITNTPNFVP----NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
I ++ + I NF+ +H+S+ +NI++ C
Sbjct: 695 MIPDIS-APRLEIGKVANFIDTVAGGNHHSA----------KIMWNIVIFGLCKLGRIED 743
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K L+ +++ G ++ +++ LI C SG V+ A + M G++P++V Y + I
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+S L +A SLF+++ I PN +TY TL+ + G + E
Sbjct: 804 GLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 181/422 (42%), Gaps = 51/422 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++R+ L++ NS++N A DL T+ V++ MQ+ G + D + I+ KA C
Sbjct: 195 VFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYC 254
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
V A E V+ + GV ++++ Y ++ + + A ++ + + G +
Sbjct: 255 KVKGVVHALEF---VEEMTKMGV-EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFS 310
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC--NILLQACVEA-CQFDR- 451
PN +T++ L+ N +E+A + +E+ + N Q + A + CQ R
Sbjct: 311 PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRK-----NKQLVVDEAVFGAVINGYCQMGRM 365
Query: 452 --AFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A RL S+ QV L G G N+ H+ + NS
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 502 YSSFDK---------------RFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRT 541
+ K R F TT TYN L+K C+ D R+ LM +
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK-- 483
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++PN IS + L+D SG E AL + K G++ + + T I + +R+ +
Sbjct: 484 -GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPE 542
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A L ++MK ++ P+++TY TL + G + + L +++ G+ +
Sbjct: 543 AEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENL---GFAPTIEFFNS 599
Query: 662 LI 663
LI
Sbjct: 600 LI 601
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 173/425 (40%), Gaps = 40/425 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQN 286
E G+ D A R D+ SPN+ + T++ V G C + A + E +++
Sbjct: 290 EVGQTND---ARRMLDSLPGRGFSPNI-VTYTLL-VKGYCNEKNMEEAEGVVQEIRKNKQ 344
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ VF +++N ++ + M + ++ YNI++ C G V A
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I E + GV + D ++Y+++V + A + ML G T+T+++L
Sbjct: 405 NILHE---MTGVGV-RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNAL 460
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTL 461
+ + G ++ A+ L+ ML+ G PN C+ LL ++ + ++A L++ + L
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520
Query: 462 SKTQVALGEDYDG--NTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+K +G +R+ E DK K++ P TY
Sbjct: 521 AKNTTTFNTVINGLCKIERMPEAEELVDKM------------------KQWRCPPDIITY 562
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L C D R ++NE+ +G +P + LI + IL M
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN 622
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+SP+ VAY I + L A++L+ EM + PNL +L+ R G E
Sbjct: 623 RGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDE 682
Query: 637 VQQCL 641
L
Sbjct: 683 ANLVL 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 91/361 (25%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQN 286
++ GK D++ ++ S + LS PN +I G C GD + +Y ++ +
Sbjct: 608 KQHGKVNDIL-----FEMSNRGLS-PNTVAYGALI--AGWCKEGDLHTAYNLYLEMIEKG 659
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMAS------------------ 326
+ N+++ +SL++ KF V +N+ ++ D+++
Sbjct: 660 LVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGG 719
Query: 327 --------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+NI++ C G A+ + ++K KG + D FTYS+++ + + +
Sbjct: 720 NHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD---KGFVA-DNFTYSSLIHGCSASGF 775
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+A +++ MLS G+TPN +T++SLI +G + +A+ LF+++ G PN+ N
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ + AF+L KQ +
Sbjct: 836 LIDKHCKDGYITEAFKL-------------------------------KQRMIEE----- 859
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
PT TY+IL+ CT Y +A L+++M + PN++++ LI
Sbjct: 860 -----------GIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908
Query: 557 A 557
Sbjct: 909 G 909
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNV 287
E GK + + + A H S+ M+ I + G+C G ++ + DL+ +
Sbjct: 705 EIGKVANFIDTV----AGGNHHSAKIMWN----IVIFGLCKLGRIEDAKNLLADLKDKGF 756
Query: 288 TLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ + ++SL++ + D+ F L M +G+ ++ +YN L+ C +G A
Sbjct: 757 VADNFTYSSLIHGCSASGFVDVAFDLR--DTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ K L KG+ + TY+T++ + A K+K+ M+ G+ P T+S
Sbjct: 815 VSLF---KKLWTKGI-SPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
LIN G +E+A+ L ++M++ +PN L+Q V D
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 18/274 (6%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+ A ANAG ++ A+ +F+EM GC + + CN +L + +F +
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE-----Q 233
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q A G D T I + + + + FV + + Y+ +M
Sbjct: 234 MQRA-GALPDKFTVAIMAKAYCKVKGVVHALEFVEEM------TKMGVEVNLVAYHAVMN 286
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MS 580
C + +++ + G SPN +++T+L+ N+E A +++ +R++ +
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV 346
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
D + I + R++ A L EM ++Q NL Y ++ + G + E
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
L +M G + + L++ +C+ + +K
Sbjct: 407 L---HEMTGVGVRPDTYSYNSLVDGYCKKGLMNK 437
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 130/313 (41%), Gaps = 19/313 (6%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ +++ A+A AL+V ++M + G + + +S++N A G + + +FE+M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+AG P+ I+ +A + A T +V L + +
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR-T 541
D + + ++ +P F P TY +L+K C + + ++ E+R
Sbjct: 295 NDARRMLDS---LPGR---------GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKN 342
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
L + + +I+ G +E A ++L M + + ++ Y I + R+ +
Sbjct: 343 KQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVE 402
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
A ++ EM ++P+ +Y +L+ + G ++ + Y M + G+ A
Sbjct: 403 AHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMN---KAFETYNTMLRNGFAATTLTYNA 459
Query: 662 LIEEWCE-GVIQD 673
L++ +C G I D
Sbjct: 460 LLKGFCSLGSIDD 472
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 23/320 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ M + G +D+ +YN+++ C G A + + AKG + DVFT++T
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI---AKGYVP-DVFTFNT 466
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + +++ M S GVTP+ IT++S++N + A E M FE M++ G
Sbjct: 467 LIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG 526
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C PN NIL ++ +A + + A L + ++ V+ G + N + K
Sbjct: 527 CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN---NGDLK 583
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ + +++ TT TYNI++ A D + + L EM G
Sbjct: 584 GAYQL-----------FRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGG 632
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+P+ ++ ++ID +GN + + L M E G P + + I R+ +A
Sbjct: 633 CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAV 692
Query: 604 SLFEEMKHYQIQPNLVTYIT 623
+ M H I P +V I+
Sbjct: 693 DIIHFMVHNGIVPEVVNSIS 712
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 181/433 (41%), Gaps = 49/433 (11%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ +S + + + + N++ FN + L + + ++ + G+ D+ +Y
Sbjct: 230 GEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTY 289
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C N V A++ H G L+ D FTY+T++ + Q A K+ +
Sbjct: 290 NTLICGLCKNSNVVEAEKYL----HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ G P+ T+ SLIN +++A+ LF L G +P N+L++ +
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405
Query: 448 QFDRAFRLFRS----------WTLS---KTQVALGEDYDGN---TDRISNMEHKD----- 486
+A ++ WT + +G D N D I+ D
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465
Query: 487 -------KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
KQ T + N +S P TYN ++ + + + LM
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSH-----GVTPDVITYNSVLNG-LSKAVKNEDLMETF 519
Query: 540 RTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
T+ G PN I++ IL ++ +G V AL ++ + G++PD V++ T I +
Sbjct: 520 ETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANN 579
Query: 597 KRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
LK A+ LF M + Y++ TY ++ A + LH ++ ++ +M AG A
Sbjct: 580 GDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEK---LFLEMG-AGGCAP 635
Query: 656 DTY-LKELIEEWC 667
DTY + +I+ +C
Sbjct: 636 DTYTYRVMIDGFC 648
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 164/363 (45%), Gaps = 25/363 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ +M ++G+ D++++N LL C G ++ + +V KG+ ++FT++
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK---KGMCS-NLFTFNIF 257
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI-NACANAGLVEQAMHLFEEMLQAG 428
++ A+ + + ++ G+TP+ +T+++LI C N+ +VE +L +++ G
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL-HKLVNGG 316
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP+ N L+ + A ++ + + K V Y + + + D+
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQG-AICKGFVPDEFTYCSLINGLCQNDEIDRA 375
Query: 489 -SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
++ N ++ K KPT YN+L+K C + ++AL MNEM G S
Sbjct: 376 LALFN----------AALGK--GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++I+ G V A ++ G PDV + T I + +++ +
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+M + + P+++TY ++L S+ ++ + ++ M + G N L E
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME---TFETMVEKGCVPNKITYNILTES 540
Query: 666 WCE 668
C+
Sbjct: 541 LCK 543
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 174/412 (42%), Gaps = 59/412 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++E + N ++ +N++MN V + K +V+ M+ +G++ D+ ++
Sbjct: 90 GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A + + ++ ++G +L+ Y T+V F + + A ++
Sbjct: 150 TIRIKSFCRTKRPHSALRL---LNNMVSQGC-QLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DML G+ P+ T++ L++ G V+++ L ++L+ G N NI +Q
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG----- 260
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
L R LS +S ++ ++ +T
Sbjct: 261 -------LCRKGMLSGA--------------MSMLDSVIREGLT---------------- 283
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYN L+ C + V+A ++++ GL P+ ++ LID G ++
Sbjct: 284 -----PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQ 338
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +IL+ G PD Y + I ++ + +A +LF ++P ++ Y L+
Sbjct: 339 NAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLI 398
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ + G + Q L + +M + G ++ +I C+ G + D N
Sbjct: 399 KGLCQEGL---ILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 157/399 (39%), Gaps = 37/399 (9%)
Query: 305 LKFTLEVYKNM-QKLGVMAD-MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK-- 360
K +L YK + QKLG + +A N+L + N++L G +K KG ++
Sbjct: 36 FKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEA 95
Query: 361 LDVF-------------TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+DVF +Y+ I+ + ++ +++ A KV M + G+ P+ T++ I +
Sbjct: 96 VDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKS 155
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A+ L M+ GC+ N+ ++ E A+ LF ++
Sbjct: 156 FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML----RIG 211
Query: 468 LGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ D + + K + Q N V S T+NI ++ C
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS---------NLFTFNIFIQGLC 262
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
A+ ++ + GL+P+ +++ LI + NV A + L + G+ PD
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T I + L+ A + + P+ TY +L+ + E+ + LA++
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN---DEIDRALALF 379
Query: 645 QDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVT 682
G K LI+ C EG+I Q E++
Sbjct: 380 NAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418
>gi|125531299|gb|EAY77864.1| hypothetical protein OsI_32907 [Oryza sativa Indica Group]
Length = 1089
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 461 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 514
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 515 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 575 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 631
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 632 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 674
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 675 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 735 QLFEEIKSIKLMPTVSMMNALITA 758
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 404 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 463
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 464 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 523
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 524 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 583
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 584 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 643
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 644 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 703
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 704 DARAKGYQVG-----------------------------------------------TIA 716
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 717 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 777 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 828
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 458 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 517
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 518 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 665 EWCE 668
E
Sbjct: 575 ACGE 578
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 488 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 547
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 548 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 607
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 608 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 667
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 668 EDMNKIGVQPDEMFLSALVD 687
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 627 RAREVYKMLQEYNIK----GTPEVYTI--ALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 681 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 740
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 741 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 797 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 853
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 459 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 518
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 519 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 578
Query: 631 YGSL 634
G++
Sbjct: 579 SGAV 582
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 151/360 (41%), Gaps = 53/360 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV+ + N ++K C A+ I V+ + G+ D+FTYS I+
Sbjct: 70 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI---VQKMVDSGIAP-DLFTYSLII 125
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+K A +V E M+ AG PN+IT++SLI+ + +G+ +++ +F++M G
Sbjct: 126 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 185
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P CN + A + + + A +F S L +
Sbjct: 186 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK------------------------- 220
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P+ + S+ Y +C D V + N M T G++PN
Sbjct: 221 ---PDII------------SYSTMLHGYATATDSCLAD---VHNIFNLMLTKGIAPNKHV 262
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILI+A G ++ A+ I + M+ GM PD V + T I R RL A F M
Sbjct: 263 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 322
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKANDTYLKELIEEWCE 668
+ P+ Y L++ +G L + ++ ++ + +D+ G K Y +I C+
Sbjct: 323 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK----YFSSIINNLCK 378
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 166/415 (40%), Gaps = 57/415 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN ++ +I+ CG K+ I+ED++++ + + F ++++ L L
Sbjct: 257 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 316
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M +GV A Y L++ CC G V A+E+ E+ + K + V +S+I+
Sbjct: 317 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN---KDIPPPGVKYFSSII 373
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + M+ G PN +T++SL+ G +E+A L + M G E
Sbjct: 374 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 433
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A +FR +M HK
Sbjct: 434 PNCYIYGTLVDGYCKNGRIDDALTVFR-----------------------DMLHK----- 465
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
KPT+ Y+I++ K + +EM G + +
Sbjct: 466 -------------------GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 506
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +++ + + A +L+ + + D++ + I + R ++A LF+
Sbjct: 507 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 566
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ Y + PN+ TY ++ + S E ++ + K+G+ ++ L ++
Sbjct: 567 ISTYGLVPNIQTYSMMITNLIKEESYEEADN---LFISVEKSGHASDSRLLNHIV 618
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 513 PTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYNIL+ Y RV A++ + GL P+ S++ LI G V+
Sbjct: 12 PTIHTYNILIDC----YRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E G+ P ++ + IK + K + +A S+ ++M I P+L TY ++
Sbjct: 67 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ ++ + ++ V + M +AG + N LI +
Sbjct: 127 GLCKSKAMDKAER---VLEQMVEAGTRPNSITYNSLIHGY 163
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM G+ P + +I ++ A I++ M + G++PD+ Y+ I
Sbjct: 66 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 125
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+SK + +A + E+M +PN +TY +L+ S G +E + V++ M
Sbjct: 126 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE---SVRVFKQMSSC 182
Query: 651 G 651
G
Sbjct: 183 G 183
>gi|115481316|ref|NP_001064251.1| Os10g0181200 [Oryza sativa Japonica Group]
gi|113638860|dbj|BAF26165.1| Os10g0181200, partial [Oryza sativa Japonica Group]
Length = 1021
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 393 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 446
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 447 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 506
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 507 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 563
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 564 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 606
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 607 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 666
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 667 QLFEEIKSIKLMPTVSMMNALITA 690
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 336 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 395
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 396 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 455
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 456 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 515
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 516 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 575
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 576 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 635
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 636 DARAKGYQVG-----------------------------------------------TIA 648
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 649 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 708
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 709 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 760
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 390 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 449
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 450 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 506
Query: 665 EWCE 668
E
Sbjct: 507 ACGE 510
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 420 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 479
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 480 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 539
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 540 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 599
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 600 EDMNKIGVQPDEMFLSALVD 619
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 559 RAREVYKMLQEYNIK----GTPEVYTI--ALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 612
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 613 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 672
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 673 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 728
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 729 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 785
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 391 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 450
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 451 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 510
Query: 631 YGSL 634
G++
Sbjct: 511 SGAV 514
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 151/360 (41%), Gaps = 53/360 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV+ + N ++K C A+ I V+ + G+ D+FTYS I+
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI---VQKMVDSGIAP-DLFTYSLII 211
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+K A +V E M+ AG PN+IT++SLI+ + +G+ +++ +F++M G
Sbjct: 212 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 271
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P CN + A + + + A +F S L +
Sbjct: 272 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK------------------------- 306
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P+ + S+ Y +C D V + N M T G++PN
Sbjct: 307 ---PDII------------SYSTMLHGYATATDSCLAD---VHNIFNLMLTKGIAPNKHV 348
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILI+A G ++ A+ I + M+ GM PD V + T I R RL A F M
Sbjct: 349 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 408
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAGYKANDTYLKELIEEWCE 668
+ P+ Y L++ +G L + ++ ++ + +D+ G K Y +I C+
Sbjct: 409 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK----YFSSIINNLCK 464
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 166/415 (40%), Gaps = 57/415 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN ++ +I+ CG K+ I+ED++++ + + F ++++ L L
Sbjct: 343 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 402
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M +GV A Y L++ CC G V A+E+ E+ + K + V +S+I+
Sbjct: 403 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN---KDIPPPGVKYFSSII 459
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + M+ G PN +T++SL+ G +E+A L + M G E
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 519
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A +FR +M HK
Sbjct: 520 PNCYIYGTLVDGYCKNGRIDDALTVFR-----------------------DMLHK----- 551
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
KPT+ Y+I++ K + +EM G + +
Sbjct: 552 -------------------GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 592
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +++ + + A +L+ + + D++ + I + R ++A LF+
Sbjct: 593 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 652
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ Y + PN+ TY ++ + S E ++ + K+G+ ++ L ++
Sbjct: 653 ISTYGLVPNIQTYSMMITNLIKEESYEEADN---LFISVEKSGHASDSRLLNHIV 704
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 513 PTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYNIL+ Y RV A++ + GL P+ S++ LI G V+
Sbjct: 98 PTIHTYNILIDC----YRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 152
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E G+ P ++ + IK + K + +A S+ ++M I P+L TY ++
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 212
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
+ ++ + ++ L + M +AG + N LI +
Sbjct: 213 GLCKSKAMDKAERVL---EQMVEAGTRPNSITYNSLIHGY 249
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM G+ P + +I ++ A I++ M + G++PD+ Y+ I
Sbjct: 152 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 211
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+SK + +A + E+M +PN +TY +L+ S G +E + V++ M
Sbjct: 212 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE---SVRVFKQMSSC 268
Query: 651 G 651
G
Sbjct: 269 G 269
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN YI T++D G C G + ++ D+ + V +++ +++ A
Sbjct: 520 PNCYIYGTLVD--GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M + G + +Y ++L C T A + ++ L A V K D+ T++ +
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML---LEKLFAMNV-KFDIITFNIV 633
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ Q A ++ + + + G+ PN T+S +I E+A +LF + ++G
Sbjct: 634 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693
Query: 430 EPNSQCCNILLQACVEACQFDRA 452
+S+ N +++ + + +A
Sbjct: 694 ASDSRLLNHIVRMLLNKAEVAKA 716
>gi|125558286|gb|EAZ03822.1| hypothetical protein OsI_25951 [Oryza sativa Indica Group]
Length = 1011
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/556 (21%), Positives = 227/556 (40%), Gaps = 110/556 (19%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKN-----ECQRLLDS---GEVEMFVGLMEVLEEFRL 186
+L+ + GVAP E+ + ++LK+ + L D+ G E VG ++ L
Sbjct: 169 LLRHMRARGVAPDEVSMSTFVRILKDVGRYSDAATLFDNWCNGRFE--VGFID------L 220
Query: 187 PVKELDE----EFRIVQLCVNKPDVNLA--IRYACIVPRADILFCNFVREFGKKRDLVSA 240
LD +F + ++C D A I+ +P+ + + + +GK L A
Sbjct: 221 DYSALDSGGPMQFLLEEMCHGNVDDAGASGIQGVARIPKLAVTYNTMIDLYGKAGKLKDA 280
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ + + + + T+I++ G CG+ ++ A++ + + ++ FN +M +
Sbjct: 281 MDMFMGMPDYGVAADTCTFNTLINIFGSCGNVKEAEALFASMIVRGTNPDVKTFNVMMTL 340
Query: 301 NAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC----------------LAGNTVL 342
A D++ L+ Y ++ K+G+ AD SY I+L+ C +G V
Sbjct: 341 FASKGDVEGVLKHYYHIGKMGLSADTVSYGIVLRVLCERKMVHEAEDVIVGIMRSGTCVP 400
Query: 343 AQEIYGEVKHLEAKGVL-KLDVF-------------TYSTIVKVFADAKWWQMALKV--- 385
Q + +K +G+L K + F T++ I+ FA+ +W+ A V
Sbjct: 401 EQPLPVVMKMYIDQGLLDKANAFFDRHCRGDEVSSKTFAAIMDAFAERGFWEEAEHVFYS 460
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ G+ + ++ ++ A A ++ L E M ++G P+ N L+Q
Sbjct: 461 HRGVRRRGI----VEYNVMVKAYGAAKRYDRVSPLLEHMNESGISPDECTFNSLIQMFAT 516
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
RA +L L K + A
Sbjct: 517 GGYPQRAKKL-----LGKMKYA-------------------------------------- 533
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
FKP TY + +Y +A L NEM+ G+ PN + + +LID +G
Sbjct: 534 ----GFKPKCETYAAAITTLSRNYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQ 589
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E AL +M E G++P+ + T+ IK ++ K+A L+ MK+ P++V +
Sbjct: 590 LEEALHYNNLMEESGIAPNQIVLTSLIKAYSKANCWKEAQDLYSRMKNMDGGPDIVASNS 649
Query: 624 LLRARSRYGSLHEVQQ 639
+L + G + +V++
Sbjct: 650 MLNLYANLGMVTKVKE 665
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 27/379 (7%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+++++ A LK ++++ M GV AD ++N L+ GN A+ ++
Sbjct: 263 TYNTMIDLYGKAGKLKDAMDMFMGMPDYGVAADTCTFNTLINIFGSCGNVKEAEALFAS- 321
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +G DV T++ ++ +FA + LK + G++ +T+++ ++
Sbjct: 322 --MIVRGT-NPDVKTFNVMMTLFASKGDVEGVLKHYYHIGKMGLSADTVSYGIVLRVLCE 378
Query: 411 AGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+V +A + ++++G C P Q ++++ ++ D+A F
Sbjct: 379 RKMVHEAEDVIVGIMRSGTCVPE-QPLPVVMKMYIDQGLLDKANAFF------------- 424
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCT 527
D D +S+ F + + + R + YN+++KA
Sbjct: 425 -DRHCRGDEVSSKTFAAIMDAFAERGFWEEAEHVFYSHRGVRRRGIVEYNVMVKAYGAAK 483
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y RV L+ M G+SP+ ++ LI G + A ++L M+ G P Y
Sbjct: 484 RYDRVSPLLEHMNESGISPDECTFNSLIQMFATGGYPQRAKKLLGKMKYAGFKPKCETYA 543
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
AI R+ + +A L+ EMK ++PN+V Y L+ + G L E L M
Sbjct: 544 AAITTLSRNYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQLEEA---LHYNNLM 600
Query: 648 WKAGYKANDTYLKELIEEW 666
++G N L LI+ +
Sbjct: 601 EESGIAPNQIVLTSLIKAY 619
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 271 DYMKSRAIY--EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN--MQKLGVMADMAS 326
+Y+ S AIY ++++ V N+ V+ L++ A + ++ N M++ G+ +
Sbjct: 552 NYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQLEEALHYNNLMEESGIAPNQIV 611
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
L+KA A AQ++Y +K+++ D+ ++++ ++A+ M KVK
Sbjct: 612 LTSLIKAYSKANCWKEAQDLYSRMKNMDGGP----DIVASNSMLNLYAN---LGMVTKVK 664
Query: 387 E--DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL----- 439
E D L + ++++S+I+ N GL+ +++ + ++ +G + N +
Sbjct: 665 EIFDCLRRNNQADDVSYTSMISLYKNMGLLNESVRVAHDLQNSGLLSDCASYNAVMACFV 724
Query: 440 ----LQACVEACQ-------------FDRAFRLFRSWTLSKTQVA-LGEDYDGNTDRISN 481
L+ C E Q F F + + ++ +V+ L Y+ N S
Sbjct: 725 AKGKLRECAELVQQMQEGNILPDASTFGMIFSIMKKIQIAPEEVSQLQSAYNDNRSSSS- 783
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTT----TYNILMK--ACCTDYYRVK 533
Q++ + H ++ + +++ KP T N+ K A C + +
Sbjct: 784 ------QAVIAFLFLIAGMHAAALNICEKY-MKPVLTIDQCACNVAFKVYASCGEVDKAF 836
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+L +M +GL P+ ++ L G G G ++ + ++
Sbjct: 837 SLFMQMHELGLKPDTATYIHLTTCYGEYGMPGGKMKAIFLL 877
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ +ID G +G ++ A+ + M + G++ D + T I + +K+A +LF
Sbjct: 262 VTYNTMIDLYGKAGKLKDAMDMFMGMPDYGVAADTCTFNTLINIFGSCGNVKEAEALFAS 321
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
M P++ T+ ++ + + S +V+ L Y + K G A+ ++ CE
Sbjct: 322 MIVRGTNPDVKTFNVMM---TLFASKGDVEGVLKHYYHIGKMGLSADTVSYGIVLRVLCE 378
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 158/379 (41%), Gaps = 73/379 (19%)
Query: 128 RIDCVVGVLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
R D V +L+ +NE G++P +++F G+ ++LL G+++ + G
Sbjct: 484 RYDRVSPLLEHMNESGISPDECTFNSLIQMFATGGYP---QRAKKLL--GKMK-YAGFKP 537
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
E + + L + + + + ++ + + P +++ + F + L
Sbjct: 538 KCETYAAAITTLSRNYLVSEAIY----LYNEMKASGVEPNV-VVYGVLIDTFAETGQLEE 592
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE---------DLRSQNVTLN 290
AL + ++ +PN + ++I + +++ +Y D+ + N LN
Sbjct: 593 ALHYNNLMEESGIAPNQIVLTSLIKAYSKANCWKEAQDLYSRMKNMDGGPDIVASNSMLN 652
Query: 291 IY-----------VFNSLM-NVNAHDLKFT--LEVYKNM-------------QKLGVMAD 323
+Y +F+ L N A D+ +T + +YKNM Q G+++D
Sbjct: 653 LYANLGMVTKVKEIFDCLRRNNQADDVSYTSMISLYKNMGLLNESVRVAHDLQNSGLLSD 712
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
ASYN ++ AC +A + +E V+ ++ +L D T+ I F+ K Q+A
Sbjct: 713 CASYNAVM-ACFVAKGKL--RECAELVQQMQEGNILP-DASTFGMI---FSIMKKIQIAP 765
Query: 384 KVKEDMLSA------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ + SA + I + LI AG+ A+++ E+ ++ + CN
Sbjct: 766 EEVSQLQSAYNDNRSSSSQAVIAFLFLI-----AGMHAAALNICEKYMKPVLTIDQCACN 820
Query: 438 ILLQACVEACQFDRAFRLF 456
+ + + D+AF LF
Sbjct: 821 VAFKVYASCGEVDKAFSLF 839
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 178/435 (40%), Gaps = 64/435 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------LAQ 344
+FNSL++ + D + ++ K M+K YNIL+ + C G LA+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439
Query: 345 EIYGEVKHLEAKGVLK---------------------------------LDVFTYSTIVK 371
+ Y E+ L A VL D TYS ++
Sbjct: 440 KAYNEM--LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A + ++M GV P+ T++ LI+ + AG+++QA + +EM++ GCEP
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY--DGNTDRISNM 482
L+ A ++A + A LF ++K T AL + Y GN ++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEM 539
+ + + P+ Y + KP TY L+ C ++VK L+ M
Sbjct: 617 -YARMRGDADIPDV---DMYFKIKNNVAEKPNVVTYGALVDGLCKA-HKVKDARDLLETM 671
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN I + LID + ++ A ++ M E G +P+V Y++ I + KRL
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRL 731
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ +M PN+V Y ++ S+ E + + + M + G K N
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM---MEEKGCKPNVVTY 788
Query: 660 KELIEEWCEGVIQDK 674
+I+ + + DK
Sbjct: 789 TAMIDGFGKAGKVDK 803
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 141/369 (38%), Gaps = 62/369 (16%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N L NV LE ++ G +YN L++ A AQ ++ E+ L
Sbjct: 219 NGLWNV-------ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAG 412
L +D FT + W+ AL + KED + PNTI ++ +I+ A
Sbjct: 272 ----LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEAS 322
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSK 463
E+AM M C PN Q ILL C+ Q R R+ + S+T+
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 464 TQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V +D+ + ME + KP YNI
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKME------------------------KCECKPGYVVYNI 418
Query: 521 LMKACCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
L+ + C+ + + NEM + G N ++ G G E A +++
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G PD Y+ I + R++ AF LF+EMK + P++ TY L+ S+ G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 633 SLHEVQQCL 641
+ + L
Sbjct: 539 IIKQAHNWL 547
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 172/407 (42%), Gaps = 43/407 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ + ++ + ++ ++ NA ++ ++K M+ GV+
Sbjct: 464 LCGF-GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ AG A E+ + + V TY+T++ + AK +A
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEM----VRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ E M++ G PN IT+++LI+ +G +E+A ++ M P+
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD---------- 628
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
D F++ + V G DG + KD + + T FV
Sbjct: 629 ------VDMYFKIKNNVAEKPNVVTYGALVDG---LCKAHKVKDARDLLET-MFVDGC-- 676
Query: 503 SSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P T Y+ L+ C + + ++M G +PN +++ LID
Sbjct: 677 ---------EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFK 727
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
++ L++L M E+ +P++V YT I + + +A+ L M+ +PN+VT
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y ++ +G +V +CL ++++M G N LI C
Sbjct: 788 YTAMIDG---FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 56/401 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++ +++ + + +L++ + A + E+
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G ++ +Y L+ C +GN A +IY ++
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD------------------ 623
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AD M K+K ++ PN +T+ +L++ A V+ A L E M GCEP
Sbjct: 624 --ADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD----- 486
N+ + L+ +A + D A +F + Y DR+ + D
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV-YTYSSLIDRLFKDKRLDLVLKV 737
Query: 487 -KQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
+ + N+ PN V T + L K TD LM M G
Sbjct: 738 LSKMLENSCAPNIVI---------------YTEMIDGLSKVAKTD--EAYKLMLMMEEKG 780
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++T +ID G +G V+ L++ + M G +P+ V YT I C + L +A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQQ 639
+L EEMK ++ +Y ++ R G L EV++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 212/543 (39%), Gaps = 107/543 (19%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M +LG+ D + +A C G + E
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK-------WREAL 296
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K + Y+ ++ +A +++ A+ M S PN T+ L+ C N
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + + M+ GC P+ N L+ A ++ F A++L + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 460 TLSKTQVALGEDYDGN-TDRISNMEHKDKQS---ITNTPNFVPNSH----YSSFDKRF-- 509
+ + G + G T ++ + + S + N N V + + F+K +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C + RV+ L EM+ G+ P+ ++TILID
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLC-NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A L M DG P VV YTT I +++K++ A LFE M PN++
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595
Query: 620 TYITLLR---------------ARSR--------------------------YGSL---- 634
TY L+ AR R YG+L
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGL 655
Query: 635 ---HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ-----------NQGE 680
H+V+ + + M+ G + N LI+ +C+ D+ Q N
Sbjct: 656 CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV 715
Query: 681 VT---LCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRM 734
T L R + L+L+ ++ L+ S A N+ I + GL+KV ++ M
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775
Query: 735 MKE 737
M+E
Sbjct: 776 MEE 778
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 175/451 (38%), Gaps = 57/451 (12%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M G + D ++Y+ ++ C N + + K ++ GV+ DV+TY+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLC---NASRVENAFFLFKEMKGTGVVP-DVYTYTIL 530
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F+ A + A ++M+ G P +T+++LI+A A V A LFE M+ GC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 430 EPNSQCCNILLQACVE------ACQF-------------DRAFRLFRSWTLSKTQVALGE 470
PN L+ + ACQ D F++ + V G
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------S 510
DG + +D PN+ Y + F
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710
Query: 511 FKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P TY+ L+ D V ++++M +PN + +T +ID + A
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ +M E G P+VV YT I ++ ++ + LF EM PN VTY L+
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRT- 687
G L E A+ ++M TY + + +C+ + K + + L
Sbjct: 831 CATGHLDEA---YALLEEM-------KQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE 880
Query: 688 -NSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
N P LL + + + K+ +A++L
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVALELH 911
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 26/256 (10%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI C GL A+ + G +P N L+Q + A + D A + R +
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
LS + LG + ++ + ++ S+ +FVPN T YN
Sbjct: 272 LSMDEFTLGF-FAQALCKVG--KWREALSLIEKEDFVPN---------------TILYNK 313
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + +A+ +N MR+ PN ++ IL+ C + +IL +M +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH--- 635
P + + + +S A+ L ++M+ + +P V Y L+ + G L
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 636 EVQQCLAVYQDMWKAG 651
+ Y +M AG
Sbjct: 434 TFELAEKAYNEMLSAG 449
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK + L + +PN +I+ C G ++ A+ E+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ ++ + ++ + +L + + ++K G + Y +L+ AG
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLE 905
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+A E++ EV K ++ Y++++ F+ A A ++ DM+ GV P+ T+
Sbjct: 906 VALELHKEVISASMSMTAKKNL--YTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963
Query: 402 SSLINACANAGLVEQAMHLFEEMLQ 426
L+ E+A+ L + + Q
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 195/479 (40%), Gaps = 66/479 (13%)
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR-YACIVPR------A 220
SG+ EMF LM E + D+ I++ N+ + + A+ Y V R
Sbjct: 176 SGDDEMFHSLMLSFES---KLCGSDDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQ 232
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
L + G+ + A R ++ + +Y +I G G + ++ +++
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 281 DLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N+ +N++++ + K + + MQ+ V D ++N LL C
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRG 352
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ E+ + ++ DVF+Y+T++ +A ++ M + + PN
Sbjct: 353 GLWEAARNLFDEMSNRR----IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPN 408
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++S++I+ A AG ++A++LF EM + N LL + + + A + R
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++G K T
Sbjct: 469 E------MASVG-----------------------------------------IKKDVVT 481
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ Y VK + EM+ + PN ++++ LID G + A+++ + +
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK 541
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ DVV Y+ I ++ + A SL +EM I PN+VTY +++ A R ++
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ A+ +++ K++ PN+ +ID CG G K A + D
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 284 SQN-VTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+N V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + AK ++ +V +YST++ FA A + AL + +M + + ++
Sbjct: 391 DLAFEI---LAQMPAKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM- 505
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
KR P TY+
Sbjct: 506 ----------------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS ++++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERS 603
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 179/449 (39%), Gaps = 91/449 (20%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
S +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC
Sbjct: 259 AFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC----- 313
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
KG ++ + + K F ++M V P+ I
Sbjct: 314 ---------------GKGGME-----FKQVAKFF-------------DEMQRNCVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEI---- 396
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ M K PN V S T +
Sbjct: 397 -------------------LAQMPAKRIM-----PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR + ++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ V+++ AG +A+ LI+ C+
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCK 561
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 151/328 (46%), Gaps = 31/328 (9%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G + DL + A +K+ + PN+ T+ID G + ++ ++ ++R N+ L+
Sbjct: 387 GGQMDLAFEILAQMPAKRIM--PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR 444
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+++ + L++ + M +G+ D+ +YN LL G ++++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K + VL ++ TYST++ ++ ++ A++V + SAG+ + + +S+LI+A
Sbjct: 505 MKR---EHVLP-NLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALC 560
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
GLV A+ L +EM + G PN N ++ A + +R+ +L + AL
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALS 620
Query: 470 E--DYDGN---------TDRISNMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPT 514
E + +GN T +N KD Q ++ H + KP
Sbjct: 621 ELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMH------QLEIKPN 674
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMR 540
T++ ++ AC C + L+ E+R
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 169/390 (43%), Gaps = 33/390 (8%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
+D +++ P+ +++ VC G + +R +++++ ++ + +++ +N+L++
Sbjct: 327 FDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICK 386
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ E+ M +M ++ SY+ ++ AG A ++GE+++L + L
Sbjct: 387 GGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN----IAL 442
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +Y+T++ ++ + AL + +M S G+ + +T+++L+ G ++ +F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDG---- 474
EM + PN + L+ + + A FR F+S L V D
Sbjct: 503 AEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKN 562
Query: 475 --NTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTTTTYN---------ILM 522
+S ++ K+ I+ PN V NS +F + + + + N L
Sbjct: 563 GLVGSAVSLIDEMTKEGIS--PNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALS 620
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ T+ RV L ++ + G + + D G + L++ + M + + P+
Sbjct: 621 ELTETEGNRVIQLFGQLTSEGNN------RMTKDCKEGMQELSCILEVFRKMHQLEIKPN 674
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
VV ++ + C R + A L EE++ +
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEELRLF 704
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK+ + + K+ PN+ T+ID G Y ++ ++ + +S + +
Sbjct: 489 YGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRAD 548
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA----------- 337
+ ++++L++ + + + + M K G+ ++ +YN ++ A +
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSN 608
Query: 338 -GNTVLAQEIYGEVKHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMA----LKVKEDMLS 391
G+ + E+ E V++L T ++ D K L+V M
Sbjct: 609 GGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQ 668
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ PN +T+S+++NAC+ E A L EE+
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>gi|222612526|gb|EEE50658.1| hypothetical protein OsJ_30888 [Oryza sativa Japonica Group]
Length = 869
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 241 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 294
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 295 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 354
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 355 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 411
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 412 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 470
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 471 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 530
Query: 620 TYITLLRA 627
L+ A
Sbjct: 531 MMNALITA 538
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 184 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 243
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 244 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 303
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 304 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 363
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 364 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 423
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 424 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 483
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 484 DARAKGYQVG-----------------------------------------------TIA 496
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 497 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 556
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 557 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 608
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 238 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 297
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+F EM I+PN+ TY L+ ++ G +V + Y M K + LI
Sbjct: 298 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIMSSKKVKPDRVVFNALIS 354
Query: 665 EWCE 668
E
Sbjct: 355 ACGE 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K KP Y L+ C C + + +EM + G+ PN +++ LID C +G V
Sbjct: 268 KEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQV 327
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--------HYQIQP 616
A IM + PD V + I C S + +AF + EM I P
Sbjct: 328 AKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILP 387
Query: 617 NLVTYITLL----------RARSRYGSLHE-------------VQQC---------LAVY 644
+ VT L+ RAR Y L E ++ C L +Y
Sbjct: 388 DHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIY 447
Query: 645 QDMWKAGYKANDTYLKELIE 664
+DM K G + ++ +L L++
Sbjct: 448 EDMNKIGVQPDEMFLSALVD 467
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 407 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 460
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 461 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 520
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 521 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 576
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 577 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 633
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P +T+N+L+ C D+ +M ++ GL P+ +T LI C G V+ ++
Sbjct: 239 PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEV 298
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y+ I C ++ ++ +AF + M +++P+ V + L+ A
Sbjct: 299 FHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGE 358
Query: 631 YGSL 634
G++
Sbjct: 359 SGAV 362
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 181/418 (43%), Gaps = 57/418 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G KS E + QN LN F +L++ V + ++++ MQK G+ D++ Y
Sbjct: 58 GQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLY 117
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVK 386
++L+ C A +Y E+K L+ ++ D+ S ++ F + K + +
Sbjct: 118 DVLIGGFCSNKKLDKALSLYAEMKMLK----IQPDIGVVSKLISSFPEEGKLIDILEETL 173
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--------------CEPN 432
EDM + T+ +S++++ N+GL+++A L M+ G PN
Sbjct: 174 EDM---NIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPN 230
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDG------NTDRIS--- 480
+ +I++ ++AC+ D A LF+ ++ D Y+ N+DR+
Sbjct: 231 TASFSIVINGLMQACKLDLAVCLFQDMA----EIGCNRDLLLYNNLINGLCNSDRLEESY 286
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
+ + ++S F NS + KR + +P Y +L++
Sbjct: 287 KLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKL 346
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C +A + +M G PN I+++ L+ V+ AL++ K + G PDV
Sbjct: 347 CKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDV 406
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+AY +K + R ++A +LF EM + P++VTY L+ + G + + CL
Sbjct: 407 IAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCL 464
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 138/350 (39%), Gaps = 56/350 (16%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E +R + +I V N LM DL L +++M ++G D+ YN L+ C N
Sbjct: 225 EKIRPNTASFSI-VINGLMQACKLDLAVCL--FQDMAEIGCNRDLLLYNNLINGLC---N 278
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +E Y +K +E G K FT ++I + AL + + M G P
Sbjct: 279 SDRLEESYKLLKEMEESG-FKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVK 337
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L+ G +A +M+Q G PN + LL +E + D+A +LF
Sbjct: 338 HYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLF--- 394
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KD + P+ + YN
Sbjct: 395 -------------------------KDISARGRCPDVI-------------------AYN 410
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
ILMK + +A L NEM GL P+ +++ +LID +G ++ A+ L M
Sbjct: 411 ILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAK 470
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
P+V YTT I ++ R A L+ EM+ +PN V ++ +
Sbjct: 471 EREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHG 520
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 120/316 (37%), Gaps = 66/316 (20%)
Query: 181 LEEFRLPVKELDEE-FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
LEE +KE++E F+ Q +N + C+ R D+ DLV
Sbjct: 282 LEESYKLLKEMEESGFKPTQFTLNSI-------FGCLCKRQDV---------SGALDLVK 325
Query: 240 ALRAYDASK--KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+R Y KH + +C+ G ++ D+ + NI +++L
Sbjct: 326 KMRLYGCEPWVKHYTLLVRKLCKH--------GKAAEASIFLTDMVQEGFPPNIIAYSAL 377
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ + ++ L+++K++ G D+ +YNIL+K A T A+ ++ E +
Sbjct: 378 LGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNE---MVM 434
Query: 356 KGVL----------------------------------KLDVFTYSTIVKVFADAKWWQM 381
KG++ + +VFTY+T++ A
Sbjct: 435 KGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDD 494
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + +M G PN + + I+ E A+ F EM + EP++ L+
Sbjct: 495 AVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVS 554
Query: 442 ACVEACQFDRAFRLFR 457
A V F AF + +
Sbjct: 555 AFVNISNFPMAFEILK 570
>gi|414586026|tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea mays]
Length = 549
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 138/333 (41%), Gaps = 56/333 (16%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLK--ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V M GVM D A+ +L+ AC L Y V+ + A GV LDV T
Sbjct: 117 ALAVLNAMATDGVMPDAAACTVLVGVYACRLH----WFDAAYEVVRWMTANGV-ALDVVT 171
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST++ A AL V + ML G PN T++ +++A +G++ +A L E M+
Sbjct: 172 YSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELLETMI 231
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG P++ N+L++A +AC F+ L +E
Sbjct: 232 AAGFAPSTATYNVLVEALCKACAFNEVDAL--------------------------LEES 265
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+ T P T TY+ M C D ++ AL+++M +VG
Sbjct: 266 SAKGWT---------------------PDTITYSTYMDGLCKDGRVHKSFALVDKMLSVG 304
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN I+ IL+D A +L+ E G +VV Y T ++ +R
Sbjct: 305 LRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLSVV 364
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
LF ++ I PN T ++ + + G LHE
Sbjct: 365 KLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHE 397
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 66/175 (37%), Gaps = 40/175 (22%)
Query: 531 RVKALMNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD------- 582
R L++EMR++ G P+ +T A + AL +L M DG+ PD
Sbjct: 80 RALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPGAALAVLNAMATDGVMPDAAACTVL 139
Query: 583 -----------------------------VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
VV Y+T I + R+ +A + + M
Sbjct: 140 VGVYACRLHWFDAAYEVVRWMTANGVALDVVTYSTLISGLCSAGRVAEALGVLDLMLEEG 199
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
QPN TY +L A G +HE ++ L + M AG+ + L+E C+
Sbjct: 200 CQPNAHTYTPILHAYCTSGMIHEAKELL---ETMIAAGFAPSTATYNVLVEALCK 251
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 187/432 (43%), Gaps = 47/432 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN T+ID G G + ++ ++ N+Y +NS++ + + ++V
Sbjct: 390 PNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV 449
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G + A++N +L C G ++ E+K+ + D T++T++
Sbjct: 450 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG----FEPDKDTFNTLIS 505
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + K+ +M+ +G TP T+++L+NA A+ G + A + ++M G +P
Sbjct: 506 SYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKP 565
Query: 432 NSQCCNILLQACVEACQFDRAF----------RLFRSWTLSKTQVALGEDYDGNTDRISN 481
N ++LL C R ++F SW L +T V +SN
Sbjct: 566 NETSYSLLLH-CYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLV------------LSN 612
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
+ + + + +FD+ ++ +KP N ++ + + + + +++
Sbjct: 613 HKCRHLRGMER-----------AFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLH 661
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+ GL PN ++ L+D A ++LK ++ PDVV+Y T IK R
Sbjct: 662 FIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKG 721
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
+++A + EM IQP +VTY T L S Y + + V + M + + ++
Sbjct: 722 LMQEAIRVLSEMTTKGIQPTIVTYNTFL---SGYAGMELFDEANEVIRFMIEHNCRPSEL 778
Query: 658 YLKELIEEWCEG 669
K L++ +C+
Sbjct: 779 TYKILVDGYCKA 790
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 179/418 (42%), Gaps = 58/418 (13%)
Query: 254 PNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD------LK 306
P + ++DV G G + + + +++RS+ + + + +++++ + K
Sbjct: 249 PTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARK 308
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F E+ N K G + YN +L+ AG A I E++ D TY
Sbjct: 309 FLAELKLNGYKPGTVM----YNSMLQVFGKAGIYTEALSILKEMEDNNCPP----DSITY 360
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + + A + + V + M S GV PN IT++++I+A AG + A+ LF +M
Sbjct: 361 NELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKD 420
Query: 427 AGCEPNSQCCN-----------------ILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
GC PN N +L + + C +RA +W T +A+
Sbjct: 421 LGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRA-----TWN---TMLAVC 472
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPT 514
+ +G + ++ + + K N+ SS+ + + F P
Sbjct: 473 SE-EGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPC 531
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TTYN L+ A D+ ++++ +M+T G PN S+++L+ +GNV G ++ K
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEK 591
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ + + P + T + + + L+ F++++ Y +P+LV ++L SR
Sbjct: 592 EIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSR 649
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 169/403 (41%), Gaps = 66/403 (16%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D+ +Y +L A +G A +++ + +E G L + TY+ ++ V+ + W
Sbjct: 215 DVRAYTTILHAYARSGKYKRAIDLFDK---MEGIG-LDPTLVTYNVMLDVYGKMGRSWGR 270
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
L++ ++M S G+ + T S++I+AC G++++A E+ G +P + N +LQ
Sbjct: 271 ILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQ 330
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + A + + E +D N P
Sbjct: 331 VFGKAGIYTEALSILK-------------------------EMED----NNCP------- 354
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILI 555
P + TYN L Y R A+++ M + G+ PN I++T +I
Sbjct: 355 -----------PDSITYNEL----AATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 399
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA G +G + AL++ M++ G +P+V Y + + + + R + + EMK
Sbjct: 400 DAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 459
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDK 674
PN T+ T+L S G + V + L ++M G++ + LI + G D
Sbjct: 460 PNRATWNTMLAVCSEEGKHNYVNKVL---REMKNCGFEPDKDTFNTLISSYARCGSEVDS 516
Query: 675 NQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
+ GE+ T + LL +A AAE++ D++
Sbjct: 517 AKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQ 559
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ + RT++ C ++ L+ ++ V NS++++ + + F+ E+
Sbjct: 600 PSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREM 659
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + G+ ++ +YN L+ A+E+ +++ V + DV +Y+T++K
Sbjct: 660 LHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQN----SVPEPDVVSYNTVIK 715
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A++V +M + G+ P +T+++ ++ A L ++A + M++ C P
Sbjct: 716 GFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRP 775
Query: 432 NSQCCNILLQACVEACQFDRA 452
+ IL+ +A + + A
Sbjct: 776 SELTYKILVDGYCKAGKHEEA 796
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL V K R L RA+D +K+ P++ + +++ + + K+R +
Sbjct: 603 ILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHF 662
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N++ +N LM+ V + EV K +Q D+ SYN ++K C G
Sbjct: 663 IHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKG- 721
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + KG+ + + TY+T + +A + + A +V M+ P+ +
Sbjct: 722 --LMQEAIRVLSEMTTKGI-QPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL 778
Query: 400 TWSSLINACANAGLVEQAM 418
T+ L++ AG E+AM
Sbjct: 779 TYKILVDGYCKAGKHEEAM 797
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 168/405 (41%), Gaps = 29/405 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + S + +N Y N +++ L+F V M+K V D+ ++N+L+ A
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +G LK + TY++++K + + A +V M V P
Sbjct: 205 AGDVDAAIAL---VDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAP 260
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +++ LI G V++A+ ++EM P+ + L+ + D A
Sbjct: 261 DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYL 320
Query: 457 RSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R V G Y G R +M +++ V F P
Sbjct: 321 REMK-GLGLVPDGVIYTMVIGGFCRAGSMS----EALRVRDEMVG----------FGCLP 365
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEM G++P+ ++T LI GN E ALQ+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVV Y + I R L +A L+++M +I PN +TY L+ +
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
G +V+ +M K G N +I+ +C K Q
Sbjct: 486 G---QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 191/470 (40%), Gaps = 72/470 (15%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E FR + C PDV +IL F R G+ ++ A++ Y +
Sbjct: 248 EVFRTMDQCSVAPDVR----------SFNILIGGFCR-VGEVKE---AVKFYKEMQHRYV 293
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I + G+ + A +++ + + ++ ++ A + L
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M G + D+ +YN LL C + A+++ E +E +GV D+ T++T++
Sbjct: 354 VRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE---MEERGVTP-DLCTFTTLI 409
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL++ + +L + P+ +T++SLI+ G + +A L+++M
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL 469
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN +IL+ + E Q + AF + M K
Sbjct: 470 PNHITYSILIDSHCEKGQVEDAFGF-----------------------LDEMVKK----- 501
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
N PN TYN ++K C + + + + +MR + P+
Sbjct: 502 GNLPNI-------------------RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDL 542
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ LI N+ GA + IM ++ + PD V Y I ++ A +F+
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKG 602
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
M I+P+ TY++L+ G+ +Q ++ +M G+ +D +
Sbjct: 603 MGDSGIEPDRYTYMSLINGHVTAGN---SKQAFQLHDEMIHRGFAPDDKF 649
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 180/430 (41%), Gaps = 43/430 (10%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
R I L + + T VF+ L+ K E ++ + V ++ N LL
Sbjct: 72 REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG LAQE Y V +++ ++ +T + +V + + A V +M
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSE----VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ +T + LI+A AG V+ A+ L + M G +P N +L+ + +FD+A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247
Query: 454 RLFRSWTLSKTQVALGEDYD------GNTDRISNME-----HKDKQSITNTPNFVPNS-- 500
+FR+ Q ++ D G R+ ++ +K+ Q TP+ V S
Sbjct: 248 EVFRTM----DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL 303
Query: 501 -----------HYSSF---DKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
H ++ K P Y +++ C +AL +EM G
Sbjct: 304 IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++ L++ + A ++L M E G++PD+ +TT I R + A
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF+ + +++P++VTY +L+ R G L + + ++ DM N LI+
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE---LWDDMHAREILPNHITYSILID 480
Query: 665 EWCE-GVIQD 673
CE G ++D
Sbjct: 481 SHCEKGQVED 490
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 62/383 (16%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ Y FNSL+ + + +++ M G D+ SY L++ C AG A E++
Sbjct: 9 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
GE+ + D+ Y+ +VK +A+ + L + M G P+T ++++++
Sbjct: 69 GEMD--------QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
++A + +EM + G P C ++ A + + A R+ L
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR----- 175
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
KP TYN L++ C
Sbjct: 176 ------------------------------------------GCKPNVWTYNALVQGFCN 193
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ ++ L+N+MR G++P+ +++ +LI G++E A ++L++M DG+ D
Sbjct: 194 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 253
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I + R QA SLF+ ++ I+PN VT+ +L+ + G + L +
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL---E 310
Query: 646 DMWKAGYKANDTYLKELIEEWCE 668
M AG + IE C+
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCK 333
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 57/402 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + C +I+ G + + E ++ + N++ +N+L+ N + +
Sbjct: 143 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ GV D +YN+L++ C+ G+ + + ++ +E G++ D +TY+ ++
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHI---ESAFRLLRLMEGDGLIA-DQYTYNALI 258
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + + + + G+ PN +T++SLIN +G + A E+M+ AGC
Sbjct: 259 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 318
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ + ++ C+ + +Q L I M KD
Sbjct: 319 PDTYTYSSFIE---HLCK------------MKGSQEGL--------SFIGEMLQKD---- 351
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
KP+T Y I++ + Y V EM + G +P+
Sbjct: 352 --------------------VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 391
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T + A G + A +L M ++G++ D +AY T + + A S+ ++
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
M PN TY LLR R + +V +WKA
Sbjct: 452 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA--GVWKA 491
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
NA + L + + M++LG +Y ++ C A+E+ ++ + KG+
Sbjct: 88 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM---LQEMFEKGLAP 144
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V T + ++ + AL+V E M G PN T+++L+ N G V +AM L
Sbjct: 145 C-VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 203
Query: 421 FEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M G P++ N+L++ C++ + AFRL R L + + + Y N +
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDG-HIESAFRLLR---LMEGDGLIADQYTYNA--L 257
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
N KD ++ S + S + R KP T+N L+ C A +
Sbjct: 258 INALCKDGRTDQAC------SLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLE 310
Query: 538 EMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M + G +P+ +++ I+ C G+ EG I +++++D + P V YT I ++
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD-VKPSTVNYTIVIHKLLKE 369
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + EM P++VTY T +RA G L+E + L
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 414
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 180/451 (39%), Gaps = 66/451 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + K+ + ALR + K PN++ ++ G C G K+ + +R+
Sbjct: 153 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ--GFCNEGKVHKAMTLLNKMRAC 210
Query: 286 NVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V + +N L+ ++ H ++ + + M+ G++AD +YN L+ A C G T
Sbjct: 211 GVNPDAVTYNLLIRGQCIDGH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ LE +G+ K + T+++++ + +A K E M+SAG TP+T T+S
Sbjct: 270 ACSLF---DSLETRGI-KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 403 SLINACANAGLVEQAMHLFEEMLQ-----------------------------------A 427
S I ++ + EMLQ +
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Query: 428 GCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQV---ALGEDYDGNTDRISNME 483
GC P+ ++A C+E + + A + + + V A DG+ I +
Sbjct: 386 GCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS-IGQTD 443
Query: 484 H-----KDKQSITNTPN----FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
H K S+ + PN F+ H P T + TD +
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA-GVWKAIELTDVF---G 499
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L + M+ PN +++ +++ G E A ++ +M+ED +S + YT +
Sbjct: 500 LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 559
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SKR A+ L M + P L++Y LL
Sbjct: 560 KSKRYLDAWVLVCSMIQHGFIPQLMSYQHLL 590
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 163/412 (39%), Gaps = 65/412 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y+ + ++ + + + + N N L+N H + F+ V + KLG D + N
Sbjct: 26 YLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNT 85
Query: 330 LLKACCLAG---------NTVLAQEI------YGEV-----KHLEAKGVLKL-------- 361
L+K CL G + V+AQ YG + K E + +KL
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 145
Query: 362 ---DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V Y+TI+ K A + +M + G+ P+ IT+++LI G + A
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGE 470
L +EM+ P NIL+ A + A L T ++ + + G
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
G + H Q N P +YNI++ C
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVN--------------------PNVYSYNIMINGLC-KCK 304
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
RV MN +R + + P+ +++ LID SG + AL ++ M G DVV YT
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + +++ L +A +LF +MK IQP + TY L+ + G L Q+
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 162/407 (39%), Gaps = 60/407 (14%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N + + G+ R V LR + + PN+ + TIID G+C D
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRS---TRPNVVMYNTIID--GLCKD-------------- 163
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
L+N A+DL Y M G+ D +Y L+ CL G + A
Sbjct: 164 ----------KLVN-EAYDL------YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 346 IYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E +K++ V+ Y+ ++ + A + M G+ P +T+S+
Sbjct: 207 LLDEMILKNINP------GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G V+ A +F M+Q G PN NI++ + + D A L R L K
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM-LHK 319
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILM 522
V Y+ D + IT+ N + H+ +P TY L+
Sbjct: 320 NMVPDTVTYNSLIDGLCK-----SGRITSALNLMNEMHHRG-------QPADVVTYTSLL 367
Query: 523 KACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A C + + AL +M+ G+ P ++T LID G ++ A ++ + + G
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DV YT I + +A ++ +M+ PN VT+ ++R+
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 150/383 (39%), Gaps = 49/383 (12%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M+ G+ A+ + NIL+ C G + + G++ L + D T +T++K
Sbjct: 34 KQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQP----DTITLNTLMKG 89
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ +L + +++ G + +++ +L+N G A+ L + PN
Sbjct: 90 LCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPN 149
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSI 490
N ++ + + A+ L+ S M+ + +I
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLY-----------------------SEMDARGIFPDAI 186
Query: 491 TNTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTD--YYRVKALMNEM 539
T T FS P YNIL+ A C + K L+ M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P ++++ L+D G V+ A QI M + G++P+V +Y I + KR+
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A +L EM H + P+ VTY +L+ + G + L + +M G A+
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG---RITSALNLMNEMHHRGQPADVVTY 363
Query: 660 KELIEEWCEGVIQDKNQNQGEVT 682
L++ C KNQN + T
Sbjct: 364 TSLLDALC------KNQNLDKAT 380
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Query: 197 IVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
+VQ+ VN P+V N+ I C R D N +RE K +
Sbjct: 281 MVQMGVN-PNVYSYNIMINGLCKCKRVDEAM-NLLREMLHKNMV---------------- 322
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P+ ++ID G+C G + + ++ + ++ + SL++ +L
Sbjct: 323 PDTVTYNSLID--GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G+ M +Y L+ C G AQE++ +HL KG +DV+TY+ +
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF---QHLLVKGCC-IDVWTYTVM 436
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + AL +K M G PN +T+ +I + ++A L EM+ G
Sbjct: 437 ISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+PN+Y +I+ C ++ + ++ +N+ + +NSL++ + T L
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G AD+ +Y LL A C N A ++ ++K +G+ + ++TY+ ++
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE---RGI-QPTMYTYTALI 402
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ + +L G + T++ +I+ G+ ++A+ + +M GC
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 462
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
PN+ I++++ E + D+A +L
Sbjct: 463 PNAVTFEIIIRSLFEKDENDKAEKLLH 489
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 178/419 (42%), Gaps = 57/419 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N++ FN ++N + +V ++M+ G ++ SYN L+ C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKW----WQMALKVKE 387
G G K +A VLK DV T + D W ++KV +
Sbjct: 270 KLG---------GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML V PN I+++SLIN N G + +A+ + ++M+ AG +PN N L+ +
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F S K Q A+ T R+ NM D
Sbjct: 381 MLKEALDMFGS---VKGQGAVP------TTRMYNML------------IDAYCKLGKIDD 419
Query: 508 RFSFK---------PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
F+ K P TYN L+ C + K L +++ + GL P+ +++ IL++
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILME 478
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQ 615
G A +LK M + G+ P + Y +K + LK A ++ +M K +++
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLR 538
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
N+ +Y LL+ S+ G L + L +M + G N + + EE +G + D
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDANMLL---NEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 174/380 (45%), Gaps = 33/380 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTL 309
PN++ +I+ G K+R + ED++ + N+ +N+L++ + + +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 310 E-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V K M + V ++ ++NIL+ N + +++ E+ + +K +V +Y++
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD----VKPNVISYNS 336
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+ +++ M+SAGV PN IT+++LIN ++++A+ +F + G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHK 485
P ++ N+L+ A + + D F L +G Y+ R N+E
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT-YNCLIAGLCRNGNIEAA 455
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFK-PTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
K FD+ S P T++ILM+ C KA L+ EM +
Sbjct: 456 KKL----------------FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL P H+++ I++ GN++ A + M +E + +V +Y ++ + +L+
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 602 AFSLFEEMKHYQIQPNLVTY 621
A L EM + PN +TY
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 166/392 (42%), Gaps = 31/392 (7%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
NV +N + + L+ A++ +F L E +K G S L+ A +
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ +Y E+ + ++ +VFT++ ++ A V EDM G +PN +++++
Sbjct: 208 EYVYKEM----IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 404 LINA---CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
LI+ G + +A + +EM++ PN NIL+ + + ++F+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM- 322
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTY 518
L +D N +++ + + N + S DK S +P TY
Sbjct: 323 -------LDQDVKPNVISYNSLIN----GLCNGGKI--SEAISMRDKMVSAGVQPNLITY 369
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ C + +AL ++ G P + +LIDA G ++ + + M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G+ PDV Y I R+ ++ A LF+++ + P+LVT+ L+ R G E
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKG---E 485
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + ++M K G K +++ +C+
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V+ + EM + PN ++ ++I+A +G + A +++ M+ G SP+VV+Y T I
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 592 VCVR---SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ + ++ +A ++ +EM + PNL T+ L+ + +L + V+++M
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL---PGSMKVFKEML 323
Query: 649 KAGYKANDTYLKELIEEWCEG 669
K N LI C G
Sbjct: 324 DQDVKPNVISYNSLINGLCNG 344
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G+ ++ +++ L S+ + ++ F+ LM + + + K M K+G+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+YNI++K C GN A + + +E + L+++V +Y+ +++ ++ +
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQ---MEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ-AMHLF 421
A + +ML G+ PN IT+ + + G V HLF
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + F K L AL + + K + P + +ID G A+ E+
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 282 LRSQNVTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + + ++ +N L+ N N K +++ + G + D+ +++IL++ C
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAK---KLFDQLTSKG-LPDLVTFHILMEGYCR 482
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-VT 395
G + A + E+ +K LK TY+ ++K + + A ++ M +
Sbjct: 483 KGESRKAAMLLKEM----SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLR 538
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
N +++ L+ + G +E A L EML+ G PN
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 144/350 (41%), Gaps = 56/350 (16%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K Y+ + + G A + +NIL+ C G+ JAQ ++ + K L+ V
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAI----TKWGLRPSVV 178
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ + ++K ML++GV P+ T+S LIN ++ A LF+EM
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + + D A ++
Sbjct: 239 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY---------------------------- 270
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ S P TYN L+ C D + L++EM
Sbjct: 271 --KQMLSQ-----------------SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G+++ A + K M ++ + D VAYT I + R A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ EM ++P+ TY ++ + G +V + + ++M + G+
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKG---DVWKGXKLLKEMQRDGH 418
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 159/379 (41%), Gaps = 33/379 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DJ +F + + + L A+ Y +++H CR +++ +
Sbjct: 69 RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++ ++Y FN LM+ D++ V+ + K G+ + SYN L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ ++ML G+
Sbjct: 189 RLGDL---DEGFRLKSAMLASGV-QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G V+ AM ++++ML P+ N L+ + +A L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 456 FRSWT---LSKTQVALGEDYDG---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ L ++ DG D S EH+ + N
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN----------------- 347
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ Y L+ C + V A ++ EM +VGL P+ ++T++I+ G+V
Sbjct: 348 -IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 568 LQILKIMREDGMSPDVVAY 586
++LK M+ DG P VV Y
Sbjct: 407 XKLLKEMQRDGHVPSVVTY 425
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K++++ E++L G + ++ L++ G + A +F+ + + G P+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSY 180
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ + D FRL + S Q
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------- 209
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
P TY++L+ C + A L +EM GL PN +++T L
Sbjct: 210 ----------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G V+ A++I K M +SPD++ Y T I + LKQA L +EM +
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 615 QPNLVTYITLLRARSRYGSL 634
+P+ +TY TL+ + G L
Sbjct: 314 KPDKITYTTLIDGCCKEGDL 333
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 503 SSFD--KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTIL 554
S FD ++ +P+ +YN LM Y R+ L + M G+ P+ ++++L
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNG----YIRLGDLDEGFRLKSAMLASGVQPDVYTYSVL 218
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ ++ A ++ M G+ P+ V +TT I ++ R+ A ++++M +
Sbjct: 219 INGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 278
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EG---- 669
P+L+TY TL+ + G L + + +M G K + LI+ C EG
Sbjct: 279 SPDLITYNTLIYGLCKKGDLKQAHHLI---DEMSVKGLKPDKITYTTLIDGCCKEGDLDS 335
Query: 670 -------VIQDKNQNQGEVT-------LCRRTNSQRPQSLLLEKVAVHLQKSA 708
+IQ+ N EV LC+ S + +L E ++V L+ A
Sbjct: 336 AFEHRKRMIQE-NIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA 387
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ID G C G + IY+ + SQ+++ ++ +N+L+ DLK
Sbjct: 245 PNGVTFTTLID--GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D +Y L+ CC G+ A E K + + + +LD Y+ +
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFE---HRKRMIQENI-RLDEVAYTAL 358
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ +MLS G+ P+ T++ +IN G V + L +EM + G
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGH 418
Query: 430 EPNSQCCNILLQA 442
P+ N+L+
Sbjct: 419 VPSVVTYNVLMNG 431
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP++ T+I G+C GD ++ + +++ + + + + +L++ DL
Sbjct: 279 SPDLITYNTLI--YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSA 336
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E K M + + D +Y L+ C G +V A+++ E+ + LK D TY+
Sbjct: 337 FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG----LKPDARTYTM 392
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
I+ F K+ ++M G P+ +T++ L+N
Sbjct: 393 IINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 513 PTTTTYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
P T +L Y++ V E+ G + + IL+ G++ A +
Sbjct: 106 PFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVF 165
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + G+ P VV+Y T + +R L + F L M +QP++ TY L+ +
Sbjct: 166 DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225
Query: 632 GSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + + ++ +M G N LI+ C+
Sbjct: 226 SKMDDANE---LFDEMLVKGLVPNGVTFTTLIDGHCK 259
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEV 311
P++ +ID G Y K+ + Y +L T + Y + L+ V
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLIN 281
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG EP
Sbjct: 282 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 341
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEHK 485
+ N L++A + RA + + + +G + D + I H+
Sbjct: 342 DVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 395
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D Q++ KR PT ++ +L+ A + + ++N+M G
Sbjct: 396 DAQAVFEVM------------KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 443
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 444 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARME 503
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 504 ELFRSLPARNLIPDVVTWTSRIGAYSR---RKQYNRCLEVFEEMIDAG 548
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV Y+ ++ + ++ A ++L A P T++ L+ A +GL+E+A +F
Sbjct: 167 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 226
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G P++ N + ++ +A +F + Q + + N
Sbjct: 227 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-----TATYTMLIN 281
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K +S F H K KP T+ L+ A + KA + ++
Sbjct: 282 LYGKASKSYMALKVF----HEMRSQK---CKPNICTFTALVNAFAREGLCEKAEEIFEQL 334
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL P+ ++ L++A +G GA +I +M+ G PD +Y + R+
Sbjct: 335 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 394
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+ A ++FE MK I P + +++ LL A SR G +V +C + M K+G K + L
Sbjct: 395 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG---KVAKCEEIVNQMHKSGIKPDTFVL 451
Query: 660 KELI 663
++
Sbjct: 452 NSML 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 25/314 (7%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 115 SNRIWGSLDSLSPNHTTWDDII--NVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 172
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 173 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 232
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ V DG M+ D Q + KR +P+T TY
Sbjct: 233 GFPPSAVVYNAYIDG------LMKGGDTQKAVEIFERM---------KRDRCQPSTATYT 277
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ + Y + +EMR+ PN ++T L++A G E A +I + ++E
Sbjct: 278 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 337
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LHE
Sbjct: 338 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHED 396
Query: 638 QQCLAVYQDMWKAG 651
Q AV++ M + G
Sbjct: 397 AQ--AVFEVMKRLG 408
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 235 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 294
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 295 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 354
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 355 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 410
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 411 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM--- 467
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----YSSFDKRFS 510
+ ++ ME + +T N + N + ++ ++ F
Sbjct: 468 --------------------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Query: 511 FKPT--------TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T T I + Y R + EM G P+ + +L+ AC
Sbjct: 508 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 567
Query: 563 NVEGALQILKIMRED 577
++ +++ M +D
Sbjct: 568 QIQEVTTVIRTMHKD 582
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY +L+KA CT + +A+ EMR G P+ + + ID G+ + A++I
Sbjct: 201 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 260
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+ D P YT I + ++ + A +F EM+ + +PN+ T+ L+ A +R
Sbjct: 261 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR 320
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
G + ++ +++ + +AG + + L+E +
Sbjct: 321 EGLCEKAEE---IFEQLQEAGLEPDVYAYNALMEAY 353
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 189/466 (40%), Gaps = 59/466 (12%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ CG G ++R + L+S+ +N+L++V F+ L V
Sbjct: 294 FTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSE 353
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ D +YN ++ A AG +E + + +KG++ + TY+TI+ +
Sbjct: 354 MEENNCPPDAVTYNEVVAAYVRAG---FHEEGAVVIDAMASKGIMP-NAVTYTTIINAYG 409
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AL++ + M+ G PN T+++++ L E+ M + M GC PN
Sbjct: 410 RVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHI 469
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N +L C + ++FR D D IS +
Sbjct: 470 TWNTMLAMCGKKGMHKYVNQVFREM----KNCGFEPDRDTFNTLIS------AYGRCGSN 519
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
N H FS P TYN L+ A D+ ++++ +MR G P+ S++
Sbjct: 520 NDAAKMHEEMIKAGFS--PCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYS 577
Query: 553 ILIDACGGSGNVEGALQI-----------------------------------LKIMRED 577
+++ + GNV+G I + +++
Sbjct: 578 LMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKH 637
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G PD+V + + + ++ +A + + +QP+LVT+ +L+ +R G +
Sbjct: 638 GYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKA 697
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVT 682
++ L + Q +G K + +I+ +C +G++Q+ + E+T
Sbjct: 698 EEVLRMLQ---TSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMT 740
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 183/443 (41%), Gaps = 39/443 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK AL +++ P+ ++ G + + + + + S+ + N
Sbjct: 338 FGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPN 397
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +++N D+ LE++ M +LG + ++A+YN +L + G L++E+
Sbjct: 398 AVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLG---MLGKKSLSEEMMK 454
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H++ G + T++T++ + + +V +M + G P+ T+++LI+A
Sbjct: 455 ILGHMKLNGC-SPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAY 513
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA--------CVEACQFDRAFRLFRSWT 460
G A + EEM++AG P N LL A E+ D + FR
Sbjct: 514 GRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSE 573
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF----------VPNSHYSSFD---- 506
S + + GN I +E +SI + F + N S
Sbjct: 574 TSYSLMVHSYAKGGNVKGIEMIE----KSIYDGDIFPSWMLLRTLVLANFKCRSLTGMER 629
Query: 507 -----KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
++ +KP N ++ + Y R ++ + GL P+ ++ L+D
Sbjct: 630 AFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYA 689
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G+ A ++L++++ G PD+V+Y T IK R +++ + EM + P +
Sbjct: 690 RGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIF 749
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY T + + G E+ ++
Sbjct: 750 TYNTFISGYAAQGMFTEINDVIS 772
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 158/385 (41%), Gaps = 57/385 (14%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D+ +Y +L A G A EI+ + + G L + TY+ ++ V+ + W
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIF---ERMNESG-LSPSLVTYNVMLDVYGKMGRSWDK 276
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
L++ ++M S G+ + T S++++AC GL+++A F + G +P + N LL
Sbjct: 277 ILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLH 336
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME----------HKDKQSIT 491
+A F A + E+ + D ++ E H++ +
Sbjct: 337 VFGKAGIFSEALSVLSEM----------EENNCPPDAVTYNEVVAAYVRAGFHEEGAVVI 386
Query: 492 N---TPNFVPNS-HYSS-----------------FDKRFSFK--PTTTTYN----ILMKA 524
+ + +PN+ Y++ FD+ P TYN +L K
Sbjct: 387 DAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKK 446
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++ + ++ M+ G SPNHI+W ++ CG G + Q+ + M+ G PD
Sbjct: 447 SLSE--EMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRD 504
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+ T I R A + EEM P + TY LL A +R G + +V
Sbjct: 505 TFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAE---SVI 561
Query: 645 QDMWKAGYKANDTYLKELIEEWCEG 669
DM G++ ++T ++ + +G
Sbjct: 562 LDMRNKGFRPSETSYSLMVHSYAKG 586
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 158/361 (43%), Gaps = 19/361 (5%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQAMH 419
LDV Y+TI+ ++ + A+++ E M +G++P+ +T++ +++ G ++ +
Sbjct: 220 LDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILE 279
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L +EM G + + C+ +L AC D A F E Y T
Sbjct: 280 LLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLK--------SEGYKPGTVTY 331
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
+ + H ++ + S S ++ + P TYN ++ A + + +++
Sbjct: 332 NALLHVFGKAGIFSEAL---SVLSEMEEN-NCPPDAVTYNEVVAAYVRAGFHEEGAVVID 387
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M + G+ PN +++T +I+A G G+++ AL++ M E G P+V Y + + +
Sbjct: 388 AMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKS 447
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ + MK PN +T+ T+L + G V Q V+++M G++ +
Sbjct: 448 LSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQ---VFREMKNCGFEPDRD 504
Query: 658 YLKELIEEWCE-GVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDL 716
LI + G D + E+ + + LL +A AAE++ +D+
Sbjct: 505 TFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDM 564
Query: 717 R 717
R
Sbjct: 565 R 565
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L RA+ A +KH P++ +C N L+I+
Sbjct: 620 KCRSLTGMERAFQALQKHGYKPDLVLC--------------------------NSMLSIF 653
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N++ + AH E+ + + G+ D+ ++N L+ G+ A+E+ ++
Sbjct: 654 AKNNMYD-RAH------EMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEV---LRM 703
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ G K D+ +Y+T++K F Q +++ +M S GV P T+++ I+ A G
Sbjct: 704 LQTSGG-KPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQG 762
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ + + M+ C PN I+ +A ++D A
Sbjct: 763 MFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEA 802
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 157/436 (36%), Gaps = 94/436 (21%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
Y+F+ LM +N + Y+ + G D+ +N+L+ C AQ ++GE+
Sbjct: 195 YLFDRLMKLNLTSPAWAF--YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI- 251
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
K L+ V +++T++ + + ++K M+ V P+ T+S LIN
Sbjct: 252 ---GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G ++ A LF EM G PN L+ + D +++
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML----------- 357
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DY 529
R KP TYN L+ C D
Sbjct: 358 ------------------------------------RKGVKPDVITYNTLINGLCKVGDL 381
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI------------------- 570
K L+ EM GL P+ ++T+LID C G++E AL+I
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 571 ----------------LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
L+ M E G+ PD YT I + +K F L +EM+
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
P +VTY LL + G + L M G +D L+E C+ G +D
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDA---MLNLGVVPDDITYNILLEGHCKHGNRED 558
Query: 674 KNQNQGEVTLCRRTNS 689
++ Q E L + S
Sbjct: 559 FDKLQSEKGLVQDYGS 574
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +ID C GD L+ LE+ K
Sbjct: 398 PDKFTYTMLIDGCCKEGD---------------------------------LESALEIRK 424
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M K G+ D ++ L+ C G + A+ E+ LEA +K D TY+ ++ F
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM--LEAG--IKPDDATYTMVIHGF 480
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ K+ ++M G P +T++ L+N G ++ A L + ML G P+
Sbjct: 481 CKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 434 QCCNILLQA 442
NILL+
Sbjct: 541 ITYNILLEG 549
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 184/452 (40%), Gaps = 37/452 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A+ Y+ + + N Y +++ G+C G K+ I + + + ++N+
Sbjct: 334 GAMELYEQATEKGIRINNYTGSILLN--GLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N D+ + + M+ G+ + ++N L+ C A+E VK +
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEW---VKKMA 448
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KGV V TY+T++ + + ++ E M GV PN +++ SLIN G +
Sbjct: 449 EKGVTP-SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGED 471
+A + +M+ G PN+Q N+L+ + A R F +S T V
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567
Query: 472 YDGNTDRISNMEHKD----KQSITNTPNFVP-NSHYSSFD---------------KRFSF 511
DG + E +D S ++P+ + NS S + K
Sbjct: 568 IDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627
Query: 512 KPTTTTYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
KPT TY+ L+ C + V+ L NEM + L P+ + + +I GN + A +
Sbjct: 628 KPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M + G+ PD + Y + I R +L L MK ++ P TY L++
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG--- 744
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
+ L + Y++M + + N + EL
Sbjct: 745 HCDLKDFSGAYVWYREMVENNFLPNASICNEL 776
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 161/372 (43%), Gaps = 25/372 (6%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V +LK +E +M+K GV ++ YN+L+ C A++++ E+ ++ G
Sbjct: 187 VKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVG-- 244
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ TY+T++ + A K++E M V PN IT++SL++ +++A
Sbjct: 245 --SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L +EM G P+ +IL + + A L+ T ++ +Y G+ +
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI---NNYTGSI-LL 358
Query: 480 SNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKAL 535
+ + + K +++ F N + YN + C D +
Sbjct: 359 NGLCKQGKVEKAEEILKKFTENGLVAD----------EVIYNTFVNGYCRIGDMNKAILT 408
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ M + GL PN I++ LID ++ A + +K M E G++P V Y T I +
Sbjct: 409 IERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGK 468
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ F + E+M+ ++PN+V+Y +L+ + G + E + V +DM G N
Sbjct: 469 LCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE---IVLRDMICRGVLPN 525
Query: 656 DTYLKELIEEWC 667
LI+ C
Sbjct: 526 AQVYNMLIDGSC 537
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 20/272 (7%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D F Y+ ++ + +M ++ + M GV PN ++ LI + A
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGN 475
+F+EM + N L+ + + D AF++ + +++ + G
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVK 533
E + F+P+ + TY+IL C D
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGY---------------TYSILFDGLLRCDDGNGAM 336
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L + G+ N+ + +IL++ G VE A +ILK E+G+ D V Y T +
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGY 396
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R + +A E M+ + ++PN +T+ +L+
Sbjct: 397 CRIGDMNKAILTIERMESFGLRPNSITFNSLI 428
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ +V L E+ G + + I A N++ ++ L MR+ G+ P+V Y
Sbjct: 157 FVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNV 216
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
I R KR++ A +F+EM + + ++VTY TL+ + G L
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGEL 262
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 187/431 (43%), Gaps = 51/431 (11%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ D +YN+L+ G+ A E ++ E K ++D YS +V F
Sbjct: 297 GLLTDQVTYNMLIHVLAKHGH---ADEALEFLRESEGKR-FRVDEVGYSAVVHSFCLNGR 352
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++ +M+S P+ +T+S++++ G ++QA + + M + GC+PN
Sbjct: 353 MAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTA 412
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-------EHKDKQSIT 491
LL + + A+ L L+K+ GED+ +D ++ E K K+S
Sbjct: 413 LLNGLCKVGKSSEAWEL-----LNKS----GEDWWTPSDITYSVVMHGFRREGKLKESCD 463
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+ F PTT N+L+ A C + K M + ++ G + N +
Sbjct: 464 VVAQMLQKG----------FFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVV 513
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T +I G++E AL +L + PDVV YT + R RLK+A L E+M
Sbjct: 514 NFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKM 573
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ + P LVTY T++ G++ E+ L D A + Y ++IE+ C
Sbjct: 574 LNRGLVPTLVTYRTVIHRYCEKGTVEELVDLL----DKMLARQELKSVY-NQVIEKLC-- 626
Query: 670 VIQDKNQNQGEVTLCRRTNSQRP--------QSLLLEKVAVHLQKSAA----ENLAIDLR 717
N+ G ++ RT SQR +S L + + A NL DL+
Sbjct: 627 AFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLK 686
Query: 718 GLTKVEARIIV 728
KV+ R+++
Sbjct: 687 LCQKVDDRLVL 697
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G + A+++L++M+ DG +PD+ A+ V V + R+ +A + M+ ++P++VT
Sbjct: 174 AGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVT 233
Query: 621 YITLLRA 627
Y L++
Sbjct: 234 YNCLIKG 240
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 163/396 (41%), Gaps = 54/396 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVFTY+ ++ + K + + E+ML AG+ PNT +++ LI + A + A+ F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG---EDYDGNTDR 478
E M + C+P+ IL+ +A ++AF +F +A+G D +T
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE------MMAMGFVPPDRALHTAM 231
Query: 479 ISNM-------EHKDKQSITNTPNFVP-----NSHYSSFDKRFSFK-------------- 512
+ + E ++ F P N+ K +
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 513 -PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
PT TY IL+ + C R + L M G PN + +T LI SG ++ A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E G PDV+ +T I +S +QA FEEM +PN+VTY T+++ S
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEVTLCRRTN 688
+ G V + + M G + L++ +C+ G + + Q E+ C +
Sbjct: 412 KIG---RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468
Query: 689 SQRPQSLLLEKVA------------VHLQKSAAENL 712
+ + S L++ + K+AAENL
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 204/480 (42%), Gaps = 54/480 (11%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F + R A+ ++ K+ P+++ ++D G K+ ++ ++ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 287 VTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ M + A +K EV+ M+K G D +YN ++ AG+ A
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH---A 276
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
QE + ++ AK + +V TY +V A + A ++ M ++G PN++ ++S
Sbjct: 277 QEALKVLDNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---- 459
LI+ A +G +++A LF+EM++AG P+ +++ ++ F++A + F
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 460 ----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
++ T + G G R++N K I + P+S
Sbjct: 396 CKPNVVTYTTIIQGLSKIG---RVANAFRIMKGMIAH--GCFPDSVTYICLLDGFCKLGR 450
Query: 505 FDK---------RFSFKPTTTTYNILMKACCTDYYRVKALMNEM------RTVGLSPNHI 549
D+ + S P Y+ L+K C D V+ ++++ L P +
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLC-DGGSVENTLDDLFEQSKAAAENLDPG-L 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQAFSLFE 607
+I++ C +G ++ A +I + M +G PD Y I RS+ R+++AF+L
Sbjct: 509 CCSIIVGLCK-TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+++ P+ VTY L + G EV + + + ++ G+ A+ L C
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIG---EVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 198/501 (39%), Gaps = 39/501 (7%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
VP L VR K + + A + +K P+ T+ID G ++
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +++ ++ + L+N A L+ E+++ M G + Y L+
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+G A ++ E+ +EA + DV T++ ++ + ++ A K E+M+ G
Sbjct: 340 FAKSGRMKEACSLFDEM--VEAG--YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T++++I + G V A + + M+ GC P+S LL + + D A
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 454 RLF-------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-------- 498
+L S L + DG + + ++ +QS N P
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE-NTLDDLFEQSKAAAENLDPGLCCSIIV 514
Query: 499 --------NSHYSSFDKRFS--FKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGL 544
+ F + S KP TTYNIL+ C R AL++++ VG
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++T L G V+ A+++L+ G + DVVAYT ++ +A S
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF+EM P+ Y ++ + L + + + +M G K L++
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK---FFDEMIGKGQKPTVATYTALVQ 691
Query: 665 EWCEGVIQDKNQNQGEVTLCR 685
C D+ ++ E L R
Sbjct: 692 ALCHAGNVDEAFHRFEGMLAR 712
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ ++++++ Q + + ++N + L+ + + M G
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKP 681
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A+Y L++A C AGN E + + + A+G L V Y ++ F A A
Sbjct: 682 TVATYTALVQALCHAGNV---DEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
LK+ EDM+S G P +T +SL + +G E+A L +EM G P++
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+ TYN LM + Y + A+ EM G++PN S+ ILI + + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLR 626
+ +IM+ PD+ + + ++ ++AF +F EM + P+ + ++R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ + E ++ V+ M K G+ + +I+
Sbjct: 234 TLLKAKRVKEARE---VFGQMEKCGFPPDAIAYNTMID 268
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 38/346 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--AMHL 420
V ++ ++ V+A + + A ++ + M + P+ +++++LINA A +G + A+ L
Sbjct: 61 VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALEL 120
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGN 475
E+ QAG P++ N L+ AC + D A +F S+ + L G
Sbjct: 121 LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGR 180
Query: 476 TDRISNMEHKDKQSITN--TPNFVP-NSHYSSFDK---------------RFSFKPTTTT 517
+ E K+ + P+ V NS +F K + F+ T
Sbjct: 181 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 240
Query: 518 YN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN I M L +EMR +G +P+ +++T+L+D+ G + A ++L+ M
Sbjct: 241 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 300
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P +V ++ I +S R A F+ M ++P+ + Y+ +L +R
Sbjct: 301 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS---D 357
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELI--------EEWCEGVIQD 673
E ++ + +Y+ M K GYK +D + L+ + EGVIQD
Sbjct: 358 ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 403
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 167/400 (41%), Gaps = 60/400 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTL 309
P + + ++ V G + +R + + +R Q++ ++ FN+L+N A L
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ +++ G+ D +YN L+ AC N A ++ E+ E + D++TY+ +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP----DLWTYNAM 174
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V V Q A + ++++ G P+ +T++SL+ A A G VE+ + EE+++AG
Sbjct: 175 VSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGF 234
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ N ++ + + D A L+ + ++
Sbjct: 235 RKDGITYNTMIHMYGKMGRLDLALGLY----------------------------DEMRA 266
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
I TP+ V TY +L+ + ++ EM GL P
Sbjct: 267 IGCTPDAV-------------------TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 307
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LI A SG + A + M E G+ PD +AY + V RS ++ L+
Sbjct: 308 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 367
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M +P+ Y LL A ++ E++ V QDM
Sbjct: 368 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIE---GVIQDM 404
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 158/356 (44%), Gaps = 37/356 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT-YST 368
+V+ +MQ LG++ Y ++ CC G A ++ + A+ + L++ +
Sbjct: 538 QVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDA----ARSDISLNILSCRVA 593
Query: 369 IVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ + K WQ A VK +GV + W++LI+A A +GL E A +F+ M++
Sbjct: 594 MIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKK 651
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQVALG-EDYDGNTDRISN 481
G P + N +++A + + D + + + +SK+ V L E + D
Sbjct: 652 GPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEV 711
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
M+ + ++PN H Y I++ C + + V+ ++ EM
Sbjct: 712 MKIYNG---MKAAGYLPNMH---------------LYRIMISLLCHNKRFRDVELMVAEM 753
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ + L+ G+GN + +++ + E G+ PD Y T I + R+ R
Sbjct: 754 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ F+L EM + P L +Y LL A G +Q ++++M GY+ N
Sbjct: 814 EEGFTLLYEMGKRGLTPKLESYKILLAAS---GKAKLWEQADLLFEEMRTKGYRLN 866
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 35/375 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R A + P A I + + + +L A+ ++ P+++ ++ V G CG
Sbjct: 124 VRQAGLRPDA-ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 182
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYN 328
++ ++++L + + +NSL+ A D++ V + + K G D +YN
Sbjct: 183 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 242
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ G LA +Y E++ + D TY+ +V A KV E+
Sbjct: 243 TMIHMYGKMGRLDLALGLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEE 298
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M AG+ P +T+S+LI A A +G + A F+ M+++G +P+ ++L + +
Sbjct: 299 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 358
Query: 449 FDRAFRLFRSWTLSK-------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ L+R+ QV L GN EH + + + V
Sbjct: 359 TRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN-------EHDEIEGVIQDMEAV---- 407
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F P + +IL+KA C + +L+ G P+ S ++DA
Sbjct: 408 -------FEMNPLVIS-SILIKAECIS--QGASLLKRACLQGYEPDGKSLLSILDAYEKM 457
Query: 562 GNVEGALQILKIMRE 576
G E L +L+ +R+
Sbjct: 458 GKHEKGLSLLEWIRQ 472
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 203/493 (41%), Gaps = 41/493 (8%)
Query: 245 DASKKHLSSPNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
DA++ +S N+ CR +I+ G + ++ + L+ Q ++ ++N+L++ A
Sbjct: 577 DAARSDISL-NILSCRVAMIEAYGKLKLWQQAENFVKGLK-QESGVDRRIWNALIHAYAE 634
Query: 304 D--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ ++ M K G + + S N +++A + G E+Y V+ L+ + K+
Sbjct: 635 SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRL---DELYVVVQELQDLDI-KI 690
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
T +++ FA A +K+ M +AG PN + +I+ + +
Sbjct: 691 SKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMV 750
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM AG +P+ N LL FDR ++ S + L D D I
Sbjct: 751 AEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSIL----EAGLEPDEDTYNTLI-- 804
Query: 482 MEHKDKQSITNTPNFVPNSHYS---SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALM 536
+ + NF P ++ KR P +Y IL+ A + + L
Sbjct: 805 --------VMYSRNFRPEEGFTLLYEMGKR-GLTPKLESYKILLAASGKAKLWEQADLLF 855
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMRT G N + +++ + N A +L M+EDG+ P + + S
Sbjct: 856 EEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTS 915
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA--RSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+A + +K ++ + + Y T+L A R+R SL + + L + +D + ++
Sbjct: 916 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLG-ITKLLEMKRDGVEPDHQV 974
Query: 655 NDTYLK--ELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL------LLEKVAVHLQK 706
++++ L E+ + ++ K+ L R ++R SL LEK+ L+
Sbjct: 975 WTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLLTERTSSLFTEVDSFLEKLGT-LED 1033
Query: 707 SAAENLAIDLRGL 719
SA+ N L L
Sbjct: 1034 SASLNFVNALEDL 1046
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 135/350 (38%), Gaps = 51/350 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F K D+ ++ Y+ K PNM++ R +I + + + ++ +
Sbjct: 702 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPD 761
Query: 291 IYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ V N+L M + T+EVY ++ + G+ D +YN L+ + +E +
Sbjct: 762 LVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI---VMYSRNFRPEEGFT 818
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L + +Y ++ AK W+ A + E+M + G N + ++
Sbjct: 819 LLYEMGKRG-LTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
NA +A HL M + G EP +IL+ + + D A ++
Sbjct: 878 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVL------------ 925
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
N+ + SN+E S P +T + ++ D
Sbjct: 926 ------NSLKSSNLE-------------------------ISTLPYSTVLDAYLRN--RD 952
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
Y + EM+ G+ P+H WT I A + A+ +LK +++ G
Sbjct: 953 YSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1002
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 42/369 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTI 369
+ M +LG ++ SYN LLK C + A+E E+ H+ A G ++ ++ +Y+T+
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFC---DENRAEEAL-ELLHMMADGQVRSCPPNLVSYNTV 210
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A + DM G+ PN +T++ +I+ A +V++A +F++M+ G
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ + Q+ R+ + + A G + D T + K
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMS------AHGLEPDCFTYGLLLDYLCKKGK 324
Query: 490 ITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV----- 542
T FD R KP + Y I++ Y K ++EM +
Sbjct: 325 CTEARKL--------FDSMIRKGIKPDVSIYGIILHG-----YATKGALSEMHSFLDLMV 371
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+SPNH + I+ A + A+ I MR+ G+SP+VV Y T I + R+
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYG--SLHEVQQCLAVYQDMWKAGYKANDTY 658
A F +M + + PN+V + +L+ YG ++ + ++ ++ +M G N +
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLV-----YGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486
Query: 659 LKELIEEWC 667
++ C
Sbjct: 487 FNTIMCNLC 495
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 174/427 (40%), Gaps = 38/427 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I+ G K+ ++ D+ Q + N+ + +++ A + V
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQ--EIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M GV ++ +Y C + G + Q E+ +K + A G L+ D FTY +
Sbjct: 262 FQQMIDKGVRPNIVTY-----TCLIHGYLSIGQWKEVVRMLKEMSAHG-LEPDCFTYGLL 315
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M+ G+ P+ + +++ A G + + + M+ G
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEH 484
PN NI+ A + A +F R LS V D R+ + E
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435
Query: 485 KDKQSITN--TPNFVPNSHY----SSFDK------------RFSFKPTTTTYNILMKACC 526
K Q I PN V + + DK P +N +M C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
T+ +KA L++ M VG P+ IS+ LI G + A ++L IM G+ P+
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R R+ A+S+F+EM I P +VTY T+L + E ++ +Y
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE---LY 612
Query: 645 QDMWKAG 651
+M +G
Sbjct: 613 LNMITSG 619
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 161/408 (39%), Gaps = 55/408 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I+FC F KK + A+ ++ ++ SPN+ T+ID G + +
Sbjct: 383 NIVFC----AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ ++ V NI VF SL+ + E++ M G+ ++ +N ++ C G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ AQ + + +E G + D+ +Y+ +++ A K+ + MLS G+ PN
Sbjct: 499 RVMKAQRL---IDLMERVGT-RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNE 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++L++ G ++ A +F+EML G P N +L + +F A L+
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL- 613
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
NM KQ T N + N
Sbjct: 614 ----------------------NMITSGKQWSIYTYNIILNG------------------ 633
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L K C D + + + L + I++ I+I A G E A+ + + +G
Sbjct: 634 --LSKNNCVD--EALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ PDV Y + + L++ +F EM+ PN + L+R
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVR 737
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/440 (18%), Positives = 182/440 (41%), Gaps = 33/440 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK A + +D+ + P++ I I+ G + + + + ++ N Y
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FN + A + ++++ M++ G+ ++ +Y L+ A C G A+ + ++
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +GV ++ ++++V W+ A ++ +M++ G+ PN + +++++
Sbjct: 441 IN---EGVAP-NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A L + M + G P+ N L++ + D A +L + L
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLL--------DIMLSV 548
Query: 471 DYDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKAC 525
N + + H +D + + YS F + S P TYN ++
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRI---------DDAYSVFQEMLSNGITPVVVTYNTILHGL 599
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ K L M T G + ++ I+++ + V+ AL++ + + + D+
Sbjct: 600 FKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I ++ R + A +LF + + P++ TY + GSL E +
Sbjct: 660 ITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFD---GM 716
Query: 644 YQDMWKAGYKANDTYLKELI 663
+ +M K+G N L L+
Sbjct: 717 FSEMEKSGCAPNSLMLNFLV 736
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 121/328 (36%), Gaps = 56/328 (17%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ +Y+IL+ C G +G + G DV + ++K DAK
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILK---TGWRVNDVVVVNRLLKGLCDAKRV 146
Query: 380 QMALKVK-EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA---GCEPNSQC 435
A+ V M G TPN +++++L+ + E+A+ L M C PN
Sbjct: 147 GEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVS 206
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N ++ Q D+A+ LF T Q I
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMT--------------------------DQGI----- 235
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
P TY I++ C R + + +M G+ PN +++T
Sbjct: 236 ----------------PPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTC 279
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI G + +++LK M G+ PD Y + + + +A LF+ M
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+P++ Y +L + G+L E+ L
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFL 367
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 204 KPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICR 260
+PD+ N IR C+V + D E K D++ ++ PN
Sbjct: 516 RPDIISYNALIRGHCLVGKTD--------EASKLLDIMLSVGL---------KPNECTYN 558
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQ 316
T++ G C G + ++++++ S +T + +N++++ +F+ E+Y NM
Sbjct: 559 TLLH--GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMI 616
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + +YNI+L L+ N + E + L +K L++D+ T++ ++
Sbjct: 617 TSGKQWSIYTYNIILNG--LSKNNCV-DEALKMFQSLCSKD-LQVDIITFNIMIGALLKD 672
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A+ + + + G+ P+ T+ + G +E+ +F EM ++GC PNS
Sbjct: 673 GRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLML 732
Query: 437 NILLQ 441
N L++
Sbjct: 733 NFLVR 737
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ---PNLVTYITLLR 626
+L+ M E G +P+VV+Y T +K R ++A L M Q++ PNLV+Y T++
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
G +V + ++ DM G N +I+ C+ + D+ +
Sbjct: 213 GFFTEG---QVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEG 260
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +G+ D +YN LL C N A+EI+GE+ +GV+ D+ ++S+++ VF+
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR---QGVVP-DLVSFSSLMAVFS 117
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
+ AL DM G+ P+ + ++ L++ C N ++E A+ + +EML+ GC +
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDV 176
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N +L + A +LF + AL + Y + + H Q T
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMV---ERGALPDFY-----TFTTLIHGHCQDGNMT 228
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
S + + +R + KP YN L+ C + + L + M + + PNHI++
Sbjct: 229 KAL---SLFGTMTQR-NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITY 284
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILI+A G+V A ++ +M E G+ P +V T IK RS +A M
Sbjct: 285 GILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Query: 612 YQIQPNLVTYITLLRARSR 630
+ P+ ++Y TL+ R
Sbjct: 345 KGVAPDHISYNTLINDGKR 363
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 33/352 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
M +YN L+ A C G L +E + + + KG LK +FTY+ I+ + A
Sbjct: 1 MVTYNTLIGAYCREG---LLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAK 56
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +ML+ G++P+T T+++L+ +A +F EML+ G P+ + L+
Sbjct: 57 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVF 116
Query: 444 VEACQFDRA---FRLFRSWTLSKTQV---ALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
D+A FR + + L V L Y N + + ++ +D+
Sbjct: 117 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML-------- 168
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
D YN ++ C + A L +EM G P+ ++T LI
Sbjct: 169 --EQGCVLD--------VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 218
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
GN+ AL + M + + PD+VAY T I + +++A L++ M +I
Sbjct: 219 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 278
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
PN +TY L+ A Y S+ V + ++ M + G K +I+ +C
Sbjct: 279 PNHITYGILINA---YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 52/306 (16%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + + A ++ M G+ P+ T++++IN G +A + EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G P++ N LL VE+C+ D S+ + GE
Sbjct: 63 LNIGLSPDTTTYNTLL---VESCRRD---------NFSEAKEIFGEML------------ 98
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTV 542
+Q + P +++ LM + + +AL+ +M+
Sbjct: 99 --RQGVV---------------------PDLVSFSSLMAVFSRNRHLDQALVYFRDMKKF 135
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+++ +T+L+ +GN+ AL+I M E G DV+AY T + + K L A
Sbjct: 136 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 195
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
LF+EM P+ T+ TL+ + G++ + L+++ M + K + L
Sbjct: 196 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNM---TKALSLFGTMTQRNIKPDIVAYNTL 252
Query: 663 IEEWCE 668
I+ +C+
Sbjct: 253 IDGFCK 258
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + F + + F + R L AL + KK P+ I ++ G C G+ +
Sbjct: 102 VVPDL-VSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH--GYCRNGNML 158
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
++ I +++ Q L++ +N+++N + T +++ M + G + D ++ L+
Sbjct: 159 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 218
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++G + +K D+ Y+T++ F + A ++ + M+S
Sbjct: 219 HGHCQDGNMTKALSLFGTMTQRN----IKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ PN IT+ LINA + G V +A L++ M++ G +P CN +++
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 325
>gi|387191507|gb|AFJ68617.1| pentatricopeptide repeat-containing protein, partial
[Nannochloropsis gaditana CCMP526]
Length = 646
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 148/335 (44%), Gaps = 39/335 (11%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ D+ SYN LL A L QE + ++ L +G D T++TI+K A
Sbjct: 236 GIVLDVKSYNALLPAVLAEAPPFLQQEAVETFLRDLSRRG-FAPDRVTFNTILKHHASMG 294
Query: 378 WWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQC 435
+AL+ M AG+ P+ ++++++I AC + AM + + Q +G E +++
Sbjct: 295 KEALALETLRMMKDQAGIVPDVVSFTTVITACGRD--WDGAMRVLAQAEQESGVEKDARM 352
Query: 436 CNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
++ C A + LF R + TQ E G +R E
Sbjct: 353 YTAAMRVCANAGRRREVLELFERMKAMQATQ----EKRKGGKERKGEGE----------- 397
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
S + R S YN +++A TD +AL + EMR VGL PN ++
Sbjct: 398 ---------SEEDRLSV---LIAYNAVLEALKTDKEWRQALQVLQEMRRVGLVPNVVNHN 445
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++DA +G AL +LK M+ + D YT AIK ++S + Q LFEEM
Sbjct: 446 TVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSADVLQGRELFEEMCAA 505
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I P+ VTY TL+ YG +Q + Q M
Sbjct: 506 GITPDAVTYTTLMEL---YGQAGNKEQMEELVQQM 537
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T++D G+ ++ A+ + ++ V + + + + + + D+ E+
Sbjct: 439 PNVVNHNTVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSADVLQGREL 498
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G+ D +Y L++ AGN +E+ V+ + K DV ++ +++
Sbjct: 499 FEEMCAAGITPDAVTYTTLMELYGQAGNKEQMEEL---VQQMSRKRGFPRDVRAFTAVIR 555
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A W+ AL++ M + V P +++ + + A A +G +A L E M + G EP
Sbjct: 556 AYGRAGLWREALELLGTMKARNVKPTVVSYGTAMAALAASGRHVEAFELLEAMKREGVEP 615
Query: 432 NSQCCNILLQACVEACQFDRAFRL 455
N +AC A + D+ +L
Sbjct: 616 NQVVLEWATEACRTAGRLDKVVQL 639
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 141/355 (39%), Gaps = 68/355 (19%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ F +++ D + V Q+ GV D Y ++ C AG
Sbjct: 311 GIVPDVVSFTTVITACGRDWDGAMRVLAQAEQESGVEKDARMYTAAMRVCANAGRRREVL 370
Query: 345 EIYGEVKHLEA-------------KGVLKLD----VFTYSTIVKVFADAKWWQMALKVKE 387
E++ +K ++A +G + D + Y+ +++ K W+ AL+V +
Sbjct: 371 ELFERMKAMQATQEKRKGGKERKGEGESEEDRLSVLIAYNAVLEALKTDKEWRQALQVLQ 430
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN + +++++A A AG +A+ L ++M + + + ++A +++
Sbjct: 431 EMRRVGLVPNVVNHNTVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSA 490
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ LF E IT
Sbjct: 491 DVLQGRELF--------------------------EEMCAAGIT---------------- 508
Query: 508 RFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNV 564
P TY LM+ + +++ L+ +M R G + ++T +I A G +G
Sbjct: 509 -----PDAVTYTTLMELYGQAGNKEQMEELVQQMSRKRGFPRDVRAFTAVIRAYGRAGLW 563
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
AL++L M+ + P VV+Y TA+ S R +AF L E MK ++PN V
Sbjct: 564 REALELLGTMKARNVKPTVVSYGTAMAALAASGRHVEAFELLEAMKREGVEPNQV 618
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 182/412 (44%), Gaps = 25/412 (6%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
G +R + LR++ + N ++ L + D + +++ M LG + + SYN
Sbjct: 175 GPAFFARLLRAGLRTRTIEANTFL-KCLCHAKRTDEAVDVLLHR-MSDLGCVPNAISYNT 232
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++K+ C G++ +QE V+ + +G DV +++T++ F A + +
Sbjct: 233 VIKSLC--GDS-RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINE 289
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ GV P+ +T++S+++A A +++A + +M+ G EP+ ++ +
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ + ++FR T SK + ++ + + KD + I H
Sbjct: 350 WKESAKMFRKMT-SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY--MTTKGHM----- 401
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +Y+IL+ T+ + + L + M G+ N + ILI A G ++
Sbjct: 402 -----PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ + M+ G+ PDVV Y+T I R RL A F +M ++PN V Y +L+
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+G L + ++ V + M K + N + +I C EG + D +
Sbjct: 517 HGFCMHGDLVKAKEL--VSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 169/410 (41%), Gaps = 59/410 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDL-KFTLEVYKNMQKLGVMADMASY 327
G + +S ++ + S+ + I FNS M+ + H K E+++ M G M D+ SY
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSY 407
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ILL G ++ + KG++ + ++ ++ A A+ V
Sbjct: 408 SILLHGYATEGRFADMNNLF---HSMADKGIVA-NCHCFNILISAHAKRGMMDEAMLVFT 463
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M GV P+ +T+S+LI+A G + AM F +M+ G EPN+ + L+
Sbjct: 464 EMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+A L +S M K +P
Sbjct: 524 DLVKAKEL-----------------------VSEMMSKG----------IP--------- 541
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P ++ ++ + C + + A + N + +G P +++ LID G +E
Sbjct: 542 ----RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 597
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +L M G+ PDVV Y T + +S ++ LF EM H +++P VTY +L
Sbjct: 598 KAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVL 657
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKAN-DTYLKELIEEWCEGVIQDK 674
G ++ ++ +M +G + DTY K L++ C + D+
Sbjct: 658 DGLFHAGRTSAAKK---MFHEMIDSGTAVDIDTY-KILLKGLCRNDLTDE 703
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 158/390 (40%), Gaps = 57/390 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +++ Q V ++ +++L++ L +E + M +G+ + Y+ L+ C
Sbjct: 461 VFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC 520
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G+ V A+E+ E + +KG+ + ++ +S+I+ + A V ++ G
Sbjct: 521 MHGDLVKAKELVSE---MMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDR 577
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++SLI+ G +E+A + + M+ G EP+ N L+ ++ + D L
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
FR M HK KPTT
Sbjct: 638 FR-----------------------EMLHK------------------------KVKPTT 650
Query: 516 TTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+I++ K + +EM G + + ++ IL+ + + A+ +
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ D+ T I + +R ++A LF + + PN+ TY ++ + GS
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ E ++ M K+G + L ++I
Sbjct: 771 VEEAD---TMFSSMEKSGCAPSSRLLNDII 797
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 24/251 (9%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
R D++ + + F + L A+ + PN + ++I G C GD +K+
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIH--GFCMHGDLVKA 528
Query: 276 RAIYEDLRSQNVTL-NIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMAS 326
+ + ++ S+ + NI F+S+++ ++AHD+ F L ++ +G + +
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDV-FNLVIH-----IGDRPTIVT 582
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N L+ CL G ++ +G + + + G+ + DV TY+T+V + + L +
Sbjct: 583 FNSLIDGYCLVGKM---EKAFGVLDAMVSVGI-EPDVVTYNTLVSGYCKSGKIDDGLILF 638
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ML V P T+T+S +++ +AG A +F EM+ +G + ILL+
Sbjct: 639 REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698
Query: 447 CQFDRAFRLFR 457
D A LF
Sbjct: 699 DLTDEAITLFH 709
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M G D+ +Y ILLK C T A ++ ++ ++ K D+ +T+
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCK----FDITILNTV 726
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + + ++G+ PN T+ +I+ G VE+A +F M ++GC
Sbjct: 727 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786
Query: 430 EPNSQCCNILLQ 441
P+S+ N +++
Sbjct: 787 APSSRLLNDIIR 798
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 176/425 (41%), Gaps = 41/425 (9%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNM 315
+ R ++ G G ++ + ++RS + L + N ++ V F +V+ M
Sbjct: 105 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 164
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ GV D S+ L+ CC G +E+ + + G LD T + +V+ +
Sbjct: 165 TRAGVCPDERSFRALVVVCCREGKV---EEVDALLAAMWRYG-FSLDNATCTVVVRSLCE 220
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
++ + ML G PN + +++ I+ V+QA H+ EEM+ G +PN
Sbjct: 221 KGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 280
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSK---------TQVALGEDYDGNTDR----ISNM 482
L+ + +RAFRLF S T + G +G R + M
Sbjct: 281 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 340
Query: 483 EHKDKQSITNTPNFVPNSHY--SSFDKRF---------SFKPTTTTYNILMKACCT---- 527
+ + TNT + H SFD+ F F P TYN ++ C
Sbjct: 341 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 400
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ Y+V + GL + I++TILI G++ AL + M E+G PD+ AY
Sbjct: 401 QEAYKVLRMATSQ---GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAY 457
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T+ I + ++++++ F++ + P TY +++ + G L V++
Sbjct: 458 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG---RSTMALRVFER 514
Query: 647 MWKAG 651
M + G
Sbjct: 515 MVQNG 519
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 126/313 (40%), Gaps = 18/313 (5%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L L V T + +++V + + A KV + M AGV P+ ++ +L+ C G VE+
Sbjct: 134 LPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVD 193
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L M + G ++ C +++++ E +F FR T + +Y D
Sbjct: 194 ALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNV-VNYTAWIDG 252
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--- 535
+ + KQ+ V KP T+ L+ C + +A
Sbjct: 253 LCKRRYV-KQAFHVLEEMVGRG----------LKPNVYTHTTLIDGLCKIGWTERAFRLF 301
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +++ PN ++T++I G + A +L M E G+ P+ YTT I +
Sbjct: 302 LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCK 361
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+AF L +MK PN+ TY ++ + G + E + L + G K +
Sbjct: 362 GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ---GLKFD 418
Query: 656 DTYLKELIEEWCE 668
LI E C+
Sbjct: 419 KITYTILITEHCK 431
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
PN T+I G C G + ++ + ++ + NIY +N++++ K E
Sbjct: 347 PNTNTYTTLIG--GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ-EA 403
Query: 312 YKNMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
YK ++ G+ D +Y IL+ C G+ A +++ + G D+ Y++
Sbjct: 404 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF---DRMVENGCCP-DIEAYTS 459
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + + K + L G+ P T++S+I G A+ +FE M+Q G
Sbjct: 460 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519
Query: 429 CEPNS--QCCNILLQA 442
C +S C N ++ A
Sbjct: 520 CFADSILMCSNNVVSA 535
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
PN++ +I G C G ++ + + Q + N + +L+ + F
Sbjct: 312 PNVHTYTVMIG--GYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 369
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M++ G + ++ +YN ++ C G QE Y ++ ++G LK D TY+ +
Sbjct: 370 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI---QEAYKVLRMATSQG-LKFDKITYTIL 425
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ AL + + M+ G P+ ++SLI+ +E++ F++ L G
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P Q ++ + + A R+F
Sbjct: 486 LPTKQTYTSMIAGYCKVGRSTMALRVF 512
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 38/337 (11%)
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--AMHLFEEMLQAGC 429
V+A + + A ++ + M + P+ +++++LINA A +G + A+ L E+ QAG
Sbjct: 3 VYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGL 62
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEH 484
P++ N L+ AC + D A +F S+ + L G + E
Sbjct: 63 RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAEL 122
Query: 485 KDKQSITN--TPNFVP-NSHYSSFDK---------------RFSFKPTTTTYN--ILMKA 524
K+ + P+ V NS +F K + F+ TYN I M
Sbjct: 123 MFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYG 182
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
L +EMR +G +P+ +++T+L+D+ G + A ++L+ M + G+ P +V
Sbjct: 183 KMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLV 242
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
++ I +S R A F+ M ++P+ + Y+ +L +R E ++ + +Y
Sbjct: 243 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS---DETRKLMVLY 299
Query: 645 QDMWKAGYKANDTYLKELI--------EEWCEGVIQD 673
+ M K GYK +D + L+ + EGVIQD
Sbjct: 300 RAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 336
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 161/384 (41%), Gaps = 60/384 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMA 325
G + +R + + +R Q++ ++ FN+L+N A LE+ +++ G+ D
Sbjct: 8 GRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAI 67
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ AC N A ++ E+ E + D++TY+ +V V Q A +
Sbjct: 68 TYNTLISACSQGSNLDDAVAVFEEMIASECRP----DLWTYNAMVSVHGRCGKAQEAELM 123
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++++ G P+ +T++SL+ A A G VE+ + EE+++AG + N ++ +
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ D A L+ + ++I TP+ V
Sbjct: 184 MGRLDLALGLY----------------------------DEMRAIGCTPDAV-------- 207
Query: 506 DKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TY +L+ + ++ EM GL P ++++ LI A SG
Sbjct: 208 -----------TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGR 256
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + M E G+ PD +AY + V RS ++ L+ M +P+ Y
Sbjct: 257 QDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQV 316
Query: 624 LLRARSRYGSLHEVQQCLAVYQDM 647
LL A ++ E++ V QDM
Sbjct: 317 LLAALAKGNEHDEIE---GVIQDM 337
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R A + P A I + + + +L A+ ++ P+++ ++ V G CG
Sbjct: 57 VRQAGLRPDA-ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 115
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYN 328
++ ++++L + + +NSL+ A D++ V + + K G D +YN
Sbjct: 116 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 175
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ G LA +Y E++ + D TY+ +V A KV E+
Sbjct: 176 TMIHMYGKMGRLDLALGLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEE 231
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M AG+ P +T+S+LI A A +G + A F+ M+++G +P+ ++L + +
Sbjct: 232 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 291
Query: 449 FDRAFRLFRS 458
+ L+R+
Sbjct: 292 TRKLMVLYRA 301
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 478 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 774 YWTYCLLLK 782
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 190/452 (42%), Gaps = 59/452 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 241
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ +A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 242 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 302 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 417 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 444
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 445 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 548
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++ M + G K ++ L + C+
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 193/475 (40%), Gaps = 81/475 (17%)
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAH 303
K+ SPN+ +I G+C G +R +++ + V ++ +N+++
Sbjct: 280 KRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLG 337
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L++ + M+K G D +YN L+ C T A+E+ K V
Sbjct: 338 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----VKEGFTPTV 392
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSA------------------------------- 392
T++ ++ + A+ + AL++K M+S+
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452
Query: 393 ----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+ V+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+A L L+K Q DG + IT T FD
Sbjct: 513 LHKAMAL-----LTKMQK------DGIIPNV----------ITYTTLLQGQCDEHDFDNA 551
Query: 509 F---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
F KP Y +L A C +A +R G++ + +T LID
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYYTTLIDGFS 610
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+GN + A +++ M ++G +PD Y+ + + KRL +A + ++M I+ +
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
Y L+ R G ++ +Y +M +G+K + T I +C EG ++D
Sbjct: 671 AYTILIDEMLREGKHDHAKR---MYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 183/454 (40%), Gaps = 62/454 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 575 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 627
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 924
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLC 684
GY ++ K ++ D G V +C
Sbjct: 925 GYNHDEVAWK---------ILNDGLLKAGYVDIC 949
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 152/385 (39%), Gaps = 42/385 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY + + G++ D +YN ++K+ C G+ A + L +G L+ + FT + +V
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYF----RLLLEGGLEPETFTCNALV 225
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A + M G N +++ LI +A V +A+ LF M + GC
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCS 285
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L+ ++ + A LF + + ++ +
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSV---------------------M 324
Query: 491 TNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKACCTDYYR-VKALMNEMR 540
T V S + K P TYN L+ C + L+N
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAV 384
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P +++T LI+ + + AL++ M D+ + I ++ RLK
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A L E+ + PN++TY +++ + G +V L V + M + G + N
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSG---KVDIALEVLKMMERDGCQPNAWTYN 501
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCR 685
L+ G+++DK ++ L +
Sbjct: 502 SLM----YGLVKDKKLHKAMALLTK 522
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 69/280 (24%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK--- 371
M++ GV D+ +YNIL+ C G+ + +K + + + +TY ++K
Sbjct: 730 MEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC-EPNYWTYCLLLKHLL 785
Query: 372 ---------VFADAKWWQMALKVK----EDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
V W + L + E M+ G+ P T+SSLI AG +E+A
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L + M G PN +L++ C + F++A
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL------------------------- 880
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
+FV S F+P +Y +L+ C D+ +VK+L
Sbjct: 881 ----------------SFV------SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ +G + + ++W IL D +G V+ Q+L IM +
Sbjct: 919 CDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N +L T ++ + M K G+ + +Y+ L+ C AG +E + H+ KG L
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL---EEACLLLDHMCGKG-LS 857
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Y+ ++K D K+++ AL M G P ++ L+ N G E+ L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
F ++L+ G + IL ++A D F++
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 202/465 (43%), Gaps = 37/465 (7%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
+ +C R+ N + E G+ +++ S L D+ + P++ T++ I
Sbjct: 66 KTSCRTVRSRTKLMNIMIEKGRPQEVQSIL---DSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ +I + + + FN+++N + +++ ++ + M++ G +++N
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K +AG +Q++ + E ++ ++ TY+ +V+ + + A V M
Sbjct: 183 LIKGYGIAGEPEESQKLLZLMSQDEN---VRPNLRTYNVLVRAWCNKXNIMKAWNVVYKM 239
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVE--- 445
+++G+ P+ +T++++ A A G QA + EM + +PN + CC I+ C E
Sbjct: 240 VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKI 299
Query: 446 --ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A QF +R+ + L V G D + D+ + +
Sbjct: 300 KEALQF--VYRM-KDLGLQPNLVVFNSLIKGFIDAV------DRDGVNEVLTLM------ 344
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ F KP T++ +M A + + + + ++M + P+ ++IL +
Sbjct: 345 ---EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E A +IL M + G P+VV +TT I + R++ A +FE+M I PNL T+
Sbjct: 402 GEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTF 461
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
TL+ YG + + V Q M + + T L + E W
Sbjct: 462 ETLIWG---YGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAW 503
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 55/409 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ AI+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A ++ E+K + K+ Y+ ++ +F AL + E+M
Sbjct: 237 ISAFCKLGRRDSATQLLNEMKENGMQPTTKI----YTMLITLFFKLDDVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H F EM + GC P++ N ++ +A + D
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A +LF+ T + NT + E K + S P++ K
Sbjct: 353 DAMKLFQEMG---TLRCIPSVVTYNTIIKALFESKSRAS--EVPSWFERM------KESG 401
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDA----------- 557
P++ TY+IL+ C KA+M EM G P ++ LIDA
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 558 ---------CGGS---------------GNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
CG S G ++ A+ + M + G +PDV AY +
Sbjct: 462 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R+ L +A S M+ + P++ +Y +L ++ G H + L+
Sbjct: 522 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 50/433 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC R RD SA + + K++ P I +I + D + +++E++R
Sbjct: 240 FCKLGR-----RD--SATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
Q +++ + L+ A + + MQ+ G D N ++ AG
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 342 LAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E+ G L+ V TY+TI+K ++K W+ E M
Sbjct: 353 DAMKLFQEM------GTLRCIPSVVTYNTIIKALFESKSRASEVPSWF-------ERMKE 399
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G++P++ T+S LI+ +E+AM L EEM + G P L+ A +A ++D
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RF 509
A LF+ L E+ ++ R+ + K + + + FD+ +
Sbjct: 460 ACELFQE---------LKENCGSSSARVYAVMIKHLGKAGRLDDAI-----NMFDEMNKL 505
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P YN LM +AL M M+ G P+ S+ I+++ +G A
Sbjct: 506 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 565
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++L M++ + PDVV+Y T + + ++A L EEM + +L+TY ++L A
Sbjct: 566 MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEA 625
Query: 628 RSRYGSLHEVQQC 640
+ + Q C
Sbjct: 626 IGKVDHEYTGQGC 638
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 20/312 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D TY +++ + + K+ ++M+ VTP + S ++ NA +V +A+
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTEL--SEVVRMLGNAKMVSKAI 179
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+ + L+ + Y
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISA 239
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALM 536
+ +D S T N + K +PTT Y +L+ D + +L
Sbjct: 240 FCKLGRRD--SATQLLNEM---------KENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR P+ ++T LI G +G ++ A M+ +G PD V I ++
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
RL A LF+EM + P++VTY T+++A + S + + ++ M ++G +
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKA--LFESKSRASEVPSWFERMKESGISPSS 406
Query: 657 TYLKELIEEWCE 668
LI+ +C+
Sbjct: 407 FTYSILIDGFCK 418
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 181/423 (42%), Gaps = 31/423 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN T ID +S + ++ S+ V +++ ++ ++M+ + K +
Sbjct: 326 APNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKD 385
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V ++ + + +Y +L+ A C AGN A+++ + +E K V +V T+S+I+
Sbjct: 386 VLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQM---LLQMEEKSV-SPNVVTFSSIL 441
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A M +G+ PN +T+ +LI+ E A+ ++ +ML G E
Sbjct: 442 NGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVE 501
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
N+ + L+ + + A LF+ +GE R ++H + ++
Sbjct: 502 ANNFIVDSLVNGLRKNGNIEEAEALFKD---------MGE-------RGLLLDHVNYATL 545
Query: 491 TN----TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
+ T N + P YN+ + C + K+ + EMR GL
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ ++ +I A GN AL++L M+ + P+++ YTT + + + +++A
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKY 665
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L EM P +TY +L+A S S + + L V++ M AG A+ T L+
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVI---LEVHELMMGAGLHADITVYNTLVH 722
Query: 665 EWC 667
C
Sbjct: 723 VLC 725
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 164/399 (41%), Gaps = 68/399 (17%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L + +N+L++ D+ L V + M G+ D+ YN L+ +G+ A E+
Sbjct: 187 LGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEV 246
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++A GV + V T++T++ + K + A + E M+ +GV P+ +T S+L++
Sbjct: 247 ---AERMKADGV-EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD 302
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
G +A LF EM + G PN + + + + + + L R +
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D G +I E KD + N PN
Sbjct: 363 DLVMYTTVMDRLGKEGKIE--EAKDVLRHALSDNITPN---------------------- 398
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C Y T+L+DA +GN++GA Q+L M E +SP
Sbjct: 399 ----CVTY----------------------TVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+VV +++ + V+ + +A +MK I PN+VTY TL+ + + L
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG---FFKCQGQEAAL 489
Query: 642 AVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGE 680
VY+DM G +AN+ + L+ G+ ++ N + E
Sbjct: 490 DVYRDMLHEGVEANNFIVDSLV----NGLRKNGNIEEAE 524
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 190/462 (41%), Gaps = 36/462 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K + +AL Y N +I ++++ G+ ++ A+++D
Sbjct: 470 VTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKD 529
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + L+ + +LM+ ++ L+V + + + + D YN+ + C G
Sbjct: 530 MGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGK 589
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ E+++ L+ D TY+T++ ALK+ +M + + PN I
Sbjct: 590 FSEAKSFLKEMRNTG----LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLI 645
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC---------VEACQFD 450
T+++L+ AG+VE+A +L EM AG P +LQAC +E +
Sbjct: 646 TYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELM 705
Query: 451 RAFRLFRSWTLSKTQVAL----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSS 504
L T+ T V + G T + M + T T N + H S
Sbjct: 706 MGAGLHADITVYNTLVHVLCCHGMTRKA-TIVLDEMLGRGIAPDTITFNALILGHCKSSH 764
Query: 505 FDKRFS---------FKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTI 553
D F+ P T+N L+ ++ EM+ +GL PN++++ I
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+ N AL++ M G P Y + I ++ + QA LF EMK
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ TY LL S+ + EV+ L +DM + G+K +
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVRILL---KDMKELGFKPS 923
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 168/411 (40%), Gaps = 24/411 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ +I++ G K+ ++ + N+ + +L++ + L+
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY++M GV A+ + L+ GN A+ ++ K + +G+L LD Y+T++
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALF---KDMGERGLL-LDHVNYATLM 546
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
ALKV ++++ ++P+ + ++ IN G +A +EM G E
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N ++ A +A +L S + L T + +E +
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL---ITYTTLVVGLLE----AGV 659
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMNEMRTVGLSPNH 548
++ N S+ F PT TY +++AC Y + + M GL +
Sbjct: 660 VEKAKYLLNEMASA-----GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADI 714
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ L+ G A +L M G++PD + + I +S L AF+ + +
Sbjct: 715 TVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQ 774
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND-TY 658
M H + PN+ T+ TLL G + E + +M K G + N+ TY
Sbjct: 775 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVIC---EMKKMGLEPNNLTY 822
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 177/439 (40%), Gaps = 49/439 (11%)
Query: 268 ICGDYMKSRAI------YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLG 319
+ G+Y K + I YE + V ++ ++L++ D +F+ +++ M K+G
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIG 324
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + +Y + + E G + + ++GV +D+ Y+T++
Sbjct: 325 VAPNHVTYCTFIDSLA---KVQRVNESLGLLGEMVSRGV-AMDLVMYTTVMDRLGKEGKI 380
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A V LS +TPN +T++ L++A AG ++ A + +M + PN + +
Sbjct: 381 EEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSI 440
Query: 440 LQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDG---------NTDRISNMEHKDK 487
L V+ +A R + ++ V G DG D +M H+
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGV 500
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTY-NILMKACCTDYYRVKALMNEMRTVG--- 543
++ NF+ +S + K + + + ++ + D+ LM+ + G
Sbjct: 501 EA----NNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMP 556
Query: 544 -------------LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
LSP+ + + + I+ G A LK MR G+ PD Y T I
Sbjct: 557 AALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 616
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
R +A L EMK I+PNL+TY TL+ G + + + L +M A
Sbjct: 617 SAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL---NEMASA 673
Query: 651 GYKANDTYLKELIEEWCEG 669
G+ + +++ C G
Sbjct: 674 GFTPTPLTYRRVLQA-CSG 691
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 138/325 (42%), Gaps = 20/325 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T++ G K++ + ++ S T + ++ + LEV
Sbjct: 642 PNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEV 701
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G+ AD+ YN L+ C G T A + E + +G+ D T++ ++
Sbjct: 702 HELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDE---MLGRGIAP-DTITFNALIL 757
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ML G++PN T+++L+ +AG + +A + EM + G EP
Sbjct: 758 GHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEP 817
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ +IL+ + A RL+ +SK + Y+ IS+ K +
Sbjct: 818 NNLTYDILVTGYAKKSNKVEALRLY-CEMVSKGFIPKASTYN---SLISDFA---KAGMM 870
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
N + +S +R T++TY+IL+ + V+ L+ +M+ +G P+
Sbjct: 871 NQAKEL----FSEMKRRGVLH-TSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKG 925
Query: 550 SWTILIDACGGSGNVEGALQILKIM 574
+ + + A G A ++LK +
Sbjct: 926 TISSMSRAFSKPGMTWEARRLLKTL 950
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 181/423 (42%), Gaps = 25/423 (5%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNV--NAHDLKFT 308
+SP++ C +++ G G +R ++ ++R N V ++Y + ++ A ++
Sbjct: 176 ASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAA 235
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +++ G+ + +YN+L+ A C +G A ++ G + +G L+ + T+
Sbjct: 236 FVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM----VEGRLRPSIVTFGI 291
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + + V ++M G+TPN + ++ LI G +A+ LF+EM+ G
Sbjct: 292 LINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG 351
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ N++ +A + + + A ++ L+ G T S
Sbjct: 352 IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLA-----------GMTVHCSLFNSVVAW 400
Query: 489 SITNTPNF-VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
+ T V RF KP ++ C + + + GL
Sbjct: 401 HLRGTGRLDVVLRLIREMVARF-LKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG 459
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N + LI N++ A ++LK M + G+ D + Y I+ C ++ ++++A L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
++M +P+L T+ T LRA Y +L +V+ L + M G K + +I+
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRA---YCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576
Query: 666 WCE 668
+C+
Sbjct: 577 YCK 579
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 122/571 (21%), Positives = 240/571 (42%), Gaps = 70/571 (12%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L + GR+EE + +V EG + S+++ ++ +G+ + R G +D
Sbjct: 254 YNVLMDALCRSGRVEEAFQLKGRMV--EGRLRP--SIVTFGILINGLARGQRFGEVD--- 306
Query: 134 GVLKKLNELGVAPLELFDGS--GFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKEL 191
VL+++ G+ P E+ G+ + C L + + G+ + + + L K L
Sbjct: 307 AVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKAL 366
Query: 192 DEEFRIVQLCVNKPDVNLA-IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
+E + ++ LA + C + + + + +R G+ ++ +R A +
Sbjct: 367 CKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW--HLRGTGRLDVVLRLIREMVA--RF 422
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
L + + I ++C G + ++ I+ + + + +NI N+L++ +++K
Sbjct: 423 LKPNDAVMTACIQELCKR-GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEA 481
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V K M GV D +YNI+++ CC A A ++ ++ K K D+FT++T
Sbjct: 482 TKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDM----IKRGFKPDLFTFNT 537
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + L + + M S G+ P+ +T+ ++I+ A V +A E+++ G
Sbjct: 538 FLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG 597
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN+ N L+ R+ ++S D G D M+H Q
Sbjct: 598 LRPNAVIYNALIGG------------YGRNGSIS--------DAIGVLD---TMKHNGIQ 634
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
PT TYN LM C K + + +
Sbjct: 635 ------------------------PTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIEL 670
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I +TI+I G ++ A+ K M + P+ + YTT + + ++AF LF
Sbjct: 671 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLF 730
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+EM I P+ V+Y TL+ SL ++
Sbjct: 731 DEMVSSGIVPDTVSYNTLISGCCEVDSLDKI 761
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 35/378 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKAC 334
A+ +++ +T N ++N L+ + + + L ++ M G+ + +YN++ KA
Sbjct: 307 AVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKAL 366
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A++I E+ L A + +F S + + L++ +M++ +
Sbjct: 367 CKEGEMEHAEQILDEM--LLAGMTVHCSLFN-SVVAWHLRGTGRLDVVLRLIREMVARFL 423
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN ++ I G E+A ++ +L G N N L+ + A +
Sbjct: 424 KPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATK 483
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRI--------SNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ K V G ++D T I S ME ++I + +
Sbjct: 484 VL------KAMVDSGVEFDRITYNIMIQFCCKASKME----EAIQLRDDMI--------- 524
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KR FKP T+N ++A C + L+++M++ GL P+ +++ +ID + +V
Sbjct: 525 KR-GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A + L + ++G+ P+ V Y I R+ + A + + MKH IQP +TY +L
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL 643
Query: 625 LRARSRYGSLHEVQQCLA 642
+ G + E ++ A
Sbjct: 644 MYWMCHAGLVEEAKEIFA 661
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 138/352 (39%), Gaps = 68/352 (19%)
Query: 398 TITWSSLINACANA---GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T T L+ AC N+ G + A F E+ G P+ + CNIL++A Q D A +
Sbjct: 142 TATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARK 201
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F GE DGN + P
Sbjct: 202 VF------------GEMRDGN----------------------------------AVAPD 215
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY +++KA C + ++ E+ G+ P +++ +L+DA SG VE A Q+
Sbjct: 216 VYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKG 275
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E + P +V + I R +R + ++ +EM+ + I PN V Y L+ R G
Sbjct: 276 RMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREG 335
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVTLCRRTNSQR 691
E L ++ +M G K + + C EG ++ Q E+ L T
Sbjct: 336 HCSEA---LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVH-- 390
Query: 692 PQSLLLEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGT 743
SL VA HL+ + G V R+I V R +K N ++ T
Sbjct: 391 -CSLFNSVVAWHLRGT----------GRLDVVLRLIREMVARFLKPNDAVMT 431
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 146/386 (37%), Gaps = 58/386 (15%)
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
T ++ V L + L + + + G + + NIL++A G LA++++
Sbjct: 144 TADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVF 203
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
GE++ A + DV+TY+ ++K A A + ++ +G+ P +T++ L++A
Sbjct: 204 GEMRDGNA---VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDA 260
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+G VE+A L M++ P+ IL+ +F
Sbjct: 261 LCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRF------------------ 302
Query: 468 LGEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G D + ME F P YN L+ C
Sbjct: 303 ------GEVDAVLQEMEG------------------------FGITPNEVIYNQLIGWHC 332
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + +A L +EM + G+ +++ ++ A G +E A QIL M GM+
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392
Query: 585 AYTTAIKVCVR-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + + +R + RL L EM ++PN ++ + G E + +
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAE---I 449
Query: 644 YQDMWKAGYKANDTYLKELIEEWCEG 669
+ + G N LI C+G
Sbjct: 450 WFLVLGKGLGVNIATSNALIHGLCQG 475
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 181/444 (40%), Gaps = 63/444 (14%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ + + K + +A+R + + PN++ TIID +C D + A
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID--SLCKDRQVTEA 220
Query: 278 --IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ ++ ++ +I+ +NSL++ N + K + M +M D+ S+N ++ A
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A ++ V + +GV + +V TY+ ++ A+KV + M+ G
Sbjct: 281 LCKEGKVTEAHDV---VDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN I++++LIN +++AM+LF EM + P++ + L+ + A
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LF + + PN V
Sbjct: 397 ALFHEMV----------------------------ACSQIPNLV---------------- 412
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY IL+ C + Y +A L+ + L P+ I ID +G +E A +
Sbjct: 413 ---TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ G+ PDV Y+ I R L +A LF EM N Y T+ R R
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529
Query: 632 GSLHEVQQCLAVYQDMWKAGYKAN 655
+E + + + Q+M G+ A+
Sbjct: 530 ---NETSRAIQLLQEMVARGFSAD 550
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 165/364 (45%), Gaps = 25/364 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + M G+ ++ + +IL+ + C A + ++ L + D T++T
Sbjct: 81 LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQP----DTATFTT 136
Query: 369 IVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ ++ + K + AL + + M+ G P+ +T+ +LIN G A+ L M+Q
Sbjct: 137 LIRGIYVEGKIGE-ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EHKD 486
C+PN N ++ + + Q AF LF S ++K Y+ + N+ E K
Sbjct: 196 NCQPNVFAYNTIIDSLCKDRQVTEAFNLF-SEMVTKGISPDIFTYNSLIHALCNLCEWKH 254
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
++ N D + P ++N ++ A C + +A ++++M G+
Sbjct: 255 VATLLN----------EMVDSKI--MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +++T L+D ++ A+++ M G P+V++Y T I + +R+ +A
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 362
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
LF EM ++ P+ VTY TL+ + +Q +A++ +M N + L++
Sbjct: 363 LFGEMCRQELIPDTVTYSTLIHGLCH---VERLQDAIALFHEMVACSQIPNLVTYRILLD 419
Query: 665 EWCE 668
C+
Sbjct: 420 YLCK 423
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 157/384 (40%), Gaps = 56/384 (14%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV------------------ 350
L ++ M G D+ +Y L+ C GNT A + G +
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 351 --------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ KG+ D+FTY++++ + W+ + +M+ + + P
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGI-SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++++++A G V +A + ++M+Q G EPN L+ + D A ++F
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPT 514
+ + K + Y+ + ++ DK F + R P
Sbjct: 330 DTM-VCKGCMPNVISYNTLINGYCKIQRIDKAMYL-------------FGEMCRQELIPD 375
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TY+ L+ C R++ AL +EM PN +++ IL+D + + A+ +L
Sbjct: 376 TVTYSTLIHGLC-HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K + + PD+ AI R+ L+ A LF + +QP++ TY ++ R
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 494
Query: 632 GSLHEVQQCLAVYQDMWKAGYKAN 655
G L E + ++++M + G N
Sbjct: 495 GLLDEASK---LFREMDENGCTLN 515
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
SSF++ R P+T +N L+ + + + +L ++M + G+ PN + ILI++
Sbjct: 47 SSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSF 106
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A +L + + G PD +TT I+ ++ +A LF++M +P++
Sbjct: 107 CHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDV 166
Query: 619 VTYITLLRARSRYGS 633
VTY TL+ + G+
Sbjct: 167 VTYGTLINGLCKVGN 181
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--EDLRSQNVTLNIYVFNSL 297
A++ +D PN+ T+I+ G C +A+Y ++ Q + + +++L
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLIN--GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382
Query: 298 MNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ H L+ + ++ M + ++ +Y ILL C N LA E +K +E
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC--KNRYLA-EAMALLKAIEG 439
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D+ + + A + A + ++ S G+ P+ T+S +IN GL++
Sbjct: 440 SN-LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A LF EM + GC N N + + + + RA +L + VA G D +
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM------VARGFSADAS 552
Query: 476 T 476
T
Sbjct: 553 T 553
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 196/453 (43%), Gaps = 36/453 (7%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
A A + SP + ++D C + A + L + ++I + N L+
Sbjct: 98 ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFC 157
Query: 301 NAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A L++ +LG + D+ SY+ILLK+ C G + A ++ + E V
Sbjct: 158 EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA--EGGAVC 215
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV Y+T++ F A + ++M+ G+ P+ +T+SS+++A A +++A
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M+ G PN+ N L+ Q+ A R+F+ + Q L + N
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRQSILPDVVTFNMLMG 332
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYR 531
S ++ K+ + + +T + P +YNI++ K C D
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQN------------PDVFSYNIMLNGYATKGCLVD--- 377
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ L + M G++P ++ +LI A G ++ A+ I MR+ G+ P+V+ YTT I
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R ++ A F +M + P+ Y L++ +GSL + ++ ++ ++ G
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS---EIMNNG 494
Query: 652 YKANDTYLKELIEEWCE-GVIQDKNQNQGEVTL 683
+ +I C+ G + D QN ++T+
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDA-QNIFDLTV 526
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 156/380 (41%), Gaps = 24/380 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + ++ +++++R Q++ ++ FN LM +K +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G D+ SYNI+L G V +++ + G+ + + T++ ++K
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF---DLMLGDGIAPV-ICTFNVLIK 402
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A+ A+ + +M GV PN +T++++I A G ++ AM F +M+ G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQS 489
+ + L+Q +A L + + L N ++ + D Q+
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV--MDAQN 520
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
I + PT Y++LM C KAL + M + G+ PN
Sbjct: 521 IFD------------LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + L++ G ++ L + + M + G+ P + Y I + R A F
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I N TY +LR
Sbjct: 629 EMTESGIAMNKCTYSIVLRG 648
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 166/403 (41%), Gaps = 62/403 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMAS 326
CG K+ I+ ++R V N+ + +++ K +E + M GV D +
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y+ L++ C G+ + A+E+ E+ + + LD+ +S+I+ A +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMN----NGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ ++ G+ P + +S L++ G +E+A+ +F+ M+ AG EPN L+ +
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ D LFR L K
Sbjct: 583 GRIDEGLSLFREM-LQK------------------------------------------- 598
Query: 507 KRFSFKPTTTTYNI----LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP+T YNI L +A T +VK +EM G++ N +++I++ +
Sbjct: 599 ---GIKPSTILYNIIIDGLFEAGRTVPAKVK--FHEMTESGIAMNKCTYSIVLRGLFKNR 653
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A+ + K +R + D++ T I +++R+++A LF + + P +VTY
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
++ + G + E + ++ M AG + + L ++ E
Sbjct: 714 IMITNLIKEGLVEEAED---MFSSMQNAGCEPDSRLLNHVVRE 753
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 35/265 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+LF + + K ++ A +D + P + ++D + G K+ +++
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S + N V+ +L+N + L +++ M + G+ YNI++ AG
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 340 TVLAQEIYGEV--------------------------------KHLEAKGVLKLDVFTYS 367
TV A+ + E+ K L A V K+D+ T +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV-KIDIITLN 678
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ + + A + + +G+ P +T+S +I GLVE+A +F M A
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Query: 428 GCEPNSQCCNILLQACVEACQFDRA 452
GCEP+S+ N +++ ++ + RA
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRA 763
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+P+ Y +I G C G +K++ + ++ + + L+I +F+S++N N L ++
Sbjct: 461 APDKYAYHCLIQ--GFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN-NLCKLGRVMD 517
Query: 311 ---VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ +G+ Y++L+ CL G A ++ + + G+ DV Y
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF---DAMVSAGIEPNDV-VYG 573
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+V + L + +ML G+ P+TI ++ +I+ AG A F EM ++
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFR 457
G N +I+L+ + FD A LF+
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
>gi|298712181|emb|CBJ33053.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 845
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ +V T++ ++ A W+ AL + ML+ + PN +++S I AC AG EQA++
Sbjct: 517 RPNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAPNATSYTSAIAACGFAGEWEQALN 576
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L + + + N ++AC EA +F+ A + R
Sbjct: 577 LLRALKKGEGKLGVGAYNAAIKACGEAGRFEEAVGILR---------------------- 614
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMN 537
ME I SS R + +P TTY + AC +Y R L+
Sbjct: 615 -EMEADVGLEIP-----------SSSTTRTTSRPDVTTYTAAIAACGRAGEYRRAVLLLR 662
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM TVG++P+ IS+ + ACG SG E +L +L+ M + G+SPDVV++ + + +
Sbjct: 663 EMPTVGITPSGISYNAAMTACGRSGQWELSLSLLREMAKLGVSPDVVSFNSVMSALGDAG 722
Query: 598 RLKQAFSLFEEMKHY----QIQPNLVTYITLLRARSRYGSLHEV 637
++A L E+ ++P+ V++ T +RA G L +
Sbjct: 723 EWERAVGLLGEISGSGGGDAVRPDYVSFATAIRACEMAGRLDDA 766
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 22/292 (7%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+ + ++ AC G A E+ +K + + G LK D+ S + A W+ AL+
Sbjct: 144 TMSAVITACGRCGQGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEWEAALR 203
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-NSQCCNILLQAC 443
V +D+ +AG+ P++ + + I AC N +E A+ L +M + P + N + AC
Sbjct: 204 VLDDLRAAGIKPDSFVYRAAITACGNGDKLEMALQLLRDMREDPDVPVDVASFNAAITAC 263
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITNTPNFVPNSH 501
Q+ RA L R T L Y + D + + P
Sbjct: 264 GRCKQWQRAISLLREITTEGLAPGL-VSYGAAITACATCNQGDAAVELLRELPIV----- 317
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNE--MRTVGLSPNHISWTILIDA 557
P + Y ++ AC + R L E M VG P+ +S++ +I A
Sbjct: 318 --------GITPDSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITA 369
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
G G E AL+ L+ M + G+ PDVV + +A+ C +S R ++A L EM
Sbjct: 370 LGEGGQWEEALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLREM 421
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 41/317 (12%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--------VTPNTITWSSLINACANAG 412
+ V+ Y+ + + K W+ AL+V + M++A +TPN T S++I AC G
Sbjct: 97 MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAVITACGRCG 156
Query: 413 LVEQAMHLFEEML-----QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
+ A+ + E M G +P+ C + + A A +++ A R+ R+ +
Sbjct: 157 QGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEWEAALRVLDDLRAAGIKPD 216
Query: 465 QVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
GN D++ M + + + P+ VP ++N +
Sbjct: 217 SFVYRAAITACGNGDKL-EMALQLLRDMREDPD-VPVD--------------VASFNAAI 260
Query: 523 KAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC C + R +L+ E+ T GL+P +S+ I AC + A+++L+ + G++
Sbjct: 261 TACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLRELPIVGIT 320
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI--QPNLVTYITLLRARSRYGSLHEVQ 638
PD + YT+ I C R+ + ++A LF E+ ++ +P+ V+Y ++ A G E
Sbjct: 321 PDSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITALGEGGQWEEA- 379
Query: 639 QCLAVYQDMWKAGYKAN 655
L ++M +AG K +
Sbjct: 380 --LRFLREMPQAGVKPD 394
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGV 320
I CG C + ++ ++ ++ ++ + + + + + A + +E+ + + +G+
Sbjct: 260 ITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLRELPIVGI 319
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D Y ++ AC AG A +++ E+ L + D +YS ++ + W+
Sbjct: 320 TPDSMVYTSVISACGRAGQWERAVDLFREISMLRVG--FRPDAVSYSAVITALGEGGQWE 377
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
AL+ +M AGV P+ + ++S + ACA +G E+A L EMLQA
Sbjct: 378 EALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLREMLQA 424
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 11/225 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK-SRAIYEDLRSQ-NVTLNIYVFNS 296
+ALR D + P+ ++ R I CG GD ++ + + D+R +V +++ FN+
Sbjct: 200 AALRVLDDLRAAGIKPDSFVYRAAITACGN-GDKLEMALQLLRDMREDPDVPVDVASFNA 258
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + + + + + G+ + SY + AC A E+ ++ L
Sbjct: 259 AITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVEL---LRELP 315
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED--MLSAGVTPNTITWSSLINACANAG 412
G+ D Y++++ A W+ A+ + + ML G P+ +++S++I A G
Sbjct: 316 IVGITP-DSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITALGEGG 374
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
E+A+ EM QAG +P+ C N + AC ++ +++ A L R
Sbjct: 375 QWEEALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLR 419
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 132/331 (39%), Gaps = 57/331 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRS-----QNVTLNIYVFNSLMNVNAHDLKF 307
+PN+ +I CG CG + + E +++ + +++ ++ ++ ++
Sbjct: 139 TPNVNTMSAVITACGRCGQGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEW 198
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V +++ G+ D Y + AC +A ++ ++ + + +DV +
Sbjct: 199 EAALRVLDDLRAAGIKPDSFVYRAAITACGNGDKLEMALQL---LRDMREDPDVPVDVAS 255
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ + K WQ A+ + ++ + G+ P +++ + I ACA + A+ L E+
Sbjct: 256 FNAAITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLRELP 315
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+S ++ AC A Q++RA LFR IS +
Sbjct: 316 IVGITPDSMVYTSVISACGRAGQWERAVDLFR--------------------EISML--- 352
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVG 543
R F+P +Y+ ++ A +AL + EM G
Sbjct: 353 ----------------------RVGFRPDAVSYSAVITALGEGGQWEEALRFLREMPQAG 390
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ P+ + + + AC SG E A +L+ M
Sbjct: 391 VKPDVVCFNSAVTACAKSGRWEEAGGLLREM 421
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA------HDLKF 307
PN+ + G G++ ++ + + ++ + N + S + L
Sbjct: 518 PNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAPNATSYTSAIAACGFAGEWEQALNL 577
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------ 361
+ K KLGV A YN +KAC AG +E G ++ +EA L++
Sbjct: 578 LRALKKGEGKLGVGA----YNAAIKACGEAGRF---EEAVGILREMEADVGLEIPSSSTT 630
Query: 362 ------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
DV TY+ + A ++ A+ + +M + G+TP+ I++++ + AC +G E
Sbjct: 631 RTTSRPDVTTYTAAIAACGRAGEYRRAVLLLREMPTVGITPSGISYNAAMTACGRSGQWE 690
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ L EM + G P+ N ++ A +A +++RA L + S A+ DY
Sbjct: 691 LSLSLLREMAKLGVSPDVVSFNSVMSALGDAGEWERAVGLLGEISGSGGGDAVRPDY 747
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ I CG G+Y ++ + ++ + +T + +N+ M + + +L +
Sbjct: 636 PDVTTYTAAIAACGRAGEYRRAVLLLREMPTVGITPSGISYNAAMTACGRSGQWELSLSL 695
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M KLGV D+ S+N ++ A AG A + GE+ ++ D +++T ++
Sbjct: 696 LREMAKLGVSPDVVSFNSVMSALGDAGEWERAVGLLGEISGSGGGDAVRPDYVSFATAIR 755
Query: 372 VFADAKWWQMALKVKEDMLSAGVTP 396
A A ++ + S G+ P
Sbjct: 756 ACEMAGRLDDAAGLRAEAASLGLLP 780
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 478 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 774 YWTYCLLLK 782
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 189/452 (41%), Gaps = 59/452 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 241
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 242 LMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 302 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 417 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 444
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 445 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 548
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++ M + G K ++ L + C+
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 193/475 (40%), Gaps = 81/475 (17%)
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAH 303
K+ SPN+ +I G+C G +R +++ + V ++ +N+++
Sbjct: 280 KRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLG 337
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L++ + M+K G D +YN L+ C T A+E+ K V
Sbjct: 338 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----VKEGFTPTV 392
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSA------------------------------- 392
T++ ++ + A+ + AL++K M+S+
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452
Query: 393 ----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+ V+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+A L L+K Q DG + IT T FD
Sbjct: 513 LHKAMAL-----LTKMQ------KDGIIPNV----------ITYTTLLQGQCDEHDFDNA 551
Query: 509 F---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
F KP Y +L A C +A +R G++ + +T LID
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYYTTLIDGFS 610
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+GN + A +++ M ++G +PD Y+ + + KRL +A + ++M I+ +
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQD 673
Y L+ R G ++ +Y +M +G+K + T I +C EG ++D
Sbjct: 671 AYTILIDEMLREGKHDHAKR---MYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 183/454 (40%), Gaps = 62/454 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 575 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 627
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 924
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLC 684
GY ++ K ++ D G V +C
Sbjct: 925 GYNHDEVAWK---------ILNDGLLKAGYVDIC 949
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 151/385 (39%), Gaps = 42/385 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY + + G++ D +YN ++K+ C G+ A + L +G L+ + FT + +V
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCF----RLLLEGGLEPETFTCNALV 225
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A + M G N +++ LI A V +A+ LF M + GC
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCS 285
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L+ ++ + A LF + + ++ +
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSV---------------------M 324
Query: 491 TNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKACCTDYYR-VKALMNEMR 540
T V S + K P TYN L+ C + L+N
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAV 384
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P +++T LI+ + + AL++ M D+ + I ++ RLK
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A L E+ + PN++TY +++ + G +V L V + M + G + N
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSG---KVDIALEVLKMMERDGCQPNAWTYN 501
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCR 685
L+ G+++DK ++ L +
Sbjct: 502 SLM----YGLVKDKKLHKAMALLTK 522
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 69/280 (24%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK--- 371
M++ GV D+ +YNIL+ C G+ + +K + + + +TY ++K
Sbjct: 730 MEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC-EPNYWTYCLLLKHLL 785
Query: 372 ---------VFADAKWWQMALKVK----EDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
V W + L + E M+ G+ P T+SSLI AG +E+A
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L + M G PN +L++ C + F++A
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL------------------------- 880
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
+FV S F+P +Y +L+ C D+ +VK+L
Sbjct: 881 ----------------SFV------SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ +G + + ++W IL D +G V+ Q+L IM +
Sbjct: 919 CDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N +L T ++ + M K G+ + +Y+ L+ C AG +E + H+ KG L
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL---EEACLLLDHMCGKG-LS 857
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Y+ ++K D K+++ AL M G P ++ L+ N G E+ L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
F ++L+ G + IL ++A D F++
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 294 FNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N A +++ +V + M++ G+ +YN L+K +AG + ++ +
Sbjct: 145 FNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKL---LD 201
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G +K ++ TY+ +++ + A V M ++G+ P+ +T++++ A A
Sbjct: 202 LMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQN 261
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVAL 468
G QA + EM + +PN + C I++ + A R + + + L
Sbjct: 262 GKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVL 321
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
+G D + D+ + + + F +P TY+ +M A
Sbjct: 322 NSLVNGFVDMM------DRDGVDEVLKLM---------EEFQIRPDVITYSTIMNAWSQA 366
Query: 529 YY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + K + N M G+ P+ +++IL + +E A ++L +M + G+ P+VV +
Sbjct: 367 GFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIF 426
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
TT I R+ A +F++M + + PNL T+ TL+
Sbjct: 427 TTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLI 465
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 160/368 (43%), Gaps = 38/368 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++N+ + G +A+Y LL A + I+ V +E K +K D ++ ++
Sbjct: 94 IFQNLIEGGHQPSLATYTTLLNALT---TQKYFKPIHSIVSLVEEK-QMKPDSIFFNALI 149
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-C 429
FA++ + A KV + M +G+ P+ T+++LI AG +++M L + M G
Sbjct: 150 NAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNV 209
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISN 481
+PN + N+L++A + A+ + T S Q +A +G T +
Sbjct: 210 KPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEA 269
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
M + + R S KP T I++ C + +AL + M
Sbjct: 270 MILEMQ--------------------RNSLKPNERTCTIIISGYCREGKVQEALRFVYRM 309
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ +G+ PN I L++ + +G ++LK+M E + PDV+ Y+T + ++ L
Sbjct: 310 KDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFL 369
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++ ++ M ++P+ Y L + R + + ++ L V M K+G N
Sbjct: 370 EKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTV---MTKSGVHPNVVIF 426
Query: 660 KELIEEWC 667
+I WC
Sbjct: 427 TTVISGWC 434
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMN--VNAHDLKFTL 309
PN C II G C + A+ R +++ + N+ V NSL+N V+ D
Sbjct: 281 PNERTCTIIIS--GYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVD 338
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV K M++ + D+ +Y+ ++ A AG +EIY + K +K D YS +
Sbjct: 339 EVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNM----LKSGVKPDAHAYSIL 394
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
K + A+ + A ++ M +GV PN + ++++I+ + G ++ AM +F++M + G
Sbjct: 395 AKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGV 454
Query: 430 EPNSQCCNILLQACVEACQ 448
PN + L+ EA Q
Sbjct: 455 SPNLKTFETLIWGYAEAKQ 473
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I+ + RE GK ++ ALR K PN+ + ++++ G D M + E
Sbjct: 288 IIISGYCRE-GKVQE---ALRFVYRMKDLGMQPNLIVLNSLVN--GFV-DMMDRDGVDEV 340
Query: 282 LR---SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
L+ + ++ ++++MN A L+ E+Y NM K GV D +Y+IL K
Sbjct: 341 LKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVR 400
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A+E+ + K + +V ++T++ + A++V + M GV+P
Sbjct: 401 AQEMEKAEEML----TVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSP 456
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T+ +LI A A +A + + M + +P ++ +A A +RA L
Sbjct: 457 NLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLL 516
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
R+ +K ++G+D D ++S E ++ TN P
Sbjct: 517 RT-VKAKMANSIGKD-DNKPAKMS--EKIYQKPHTNAP 550
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 57/391 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+++Q +T + N ++ + +++ V+ M GV+ D +SY +++ C G
Sbjct: 773 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
QE + + +G + D T + I+ + A+ M+ G PN
Sbjct: 833 KI---QEADRWLTGMIQRGFIP-DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 888
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I ++SLI+ G ++QA + EEM++ G +PN L+ + ++AFRLF
Sbjct: 889 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK 948
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S T +KP TY
Sbjct: 949 LVRSDT----------------------------------------------YKPNVHTY 962
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + R + L + M+ GL PN ++T LI+ +G+ A +++ +M +
Sbjct: 963 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 1022
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G P++ Y AI + R +A+ L + ++ + VTY L++ + + ++
Sbjct: 1023 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ---ND 1079
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ Q LA + M K G++A+ LI +C
Sbjct: 1080 INQALAFFCRMNKTGFEADMRLNNILIAAFC 1110
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ +M+ GL+P+ I+ +++ G +E A + M G+ PD +Y + C
Sbjct: 769 GMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGC 828
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
R ++++A M P+ T +L A G V + + ++ M G+K
Sbjct: 829 FRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL---VNRAIWYFRKMIDLGFK 885
Query: 654 ANDTYLKELIEEWCE 668
N LI+ C+
Sbjct: 886 PNLINFTSLIDGLCK 900
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 179/436 (41%), Gaps = 63/436 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D + A ++ + Q ++ +I+ + S
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 249
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M D+ ++ ++ A C G A ++ V +
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV---VDMMI 306
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G PN I++++LIN +
Sbjct: 307 IRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A +LFEEM Q PN+ N L+ C RL + L VA G+
Sbjct: 366 DKATYLFEEMCQKELIPNTVTYNTLMHXC-------HVGRLQDAIALFHEMVAHGQ---- 414
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P TY IL+ C +
Sbjct: 415 -------------------------------------IPDLATYRILLDYLCKKSHLDEA 437
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A I + G+ P+V YT I
Sbjct: 438 MALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 497
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
R L +A LF EM P+ TY T+ + + E + + + Q+M G+
Sbjct: 498 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRAIQLLQEMLARGF 554
Query: 653 KANDTYLKELIEEWCE 668
A+ + L+E C+
Sbjct: 555 SADVSTTTLLVEMLCD 570
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 165/384 (42%), Gaps = 34/384 (8%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN L+ A ++ + M G+ D+ + NIL+ + C A + ++
Sbjct: 72 FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D T++T+++ AL + + M+ G PN +T+ +LIN
Sbjct: 132 KLGHQP----DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 187
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G A+ L M Q C+P+ ++ + + Q AF LF +G+
Sbjct: 188 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM--------VGQG 239
Query: 472 YDGNTDRISNMEHK-----DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ +++ H + + +T N + NS P ++ ++ A C
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS---------KIMPDVVIFSTVVDALC 290
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A +++ M G+ PN +++ L+D ++ A+++ M +G +P+V+
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T I + +R+ +A LFEEM ++ PN VTY TL+ G L Q +A++
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRL---QDAIALF 406
Query: 645 QDMWKAGYKANDTYLKELIEEWCE 668
+M G + + L++ C+
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCK 430
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 165/380 (43%), Gaps = 25/380 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G + +++ + + N+ + +L+N + + + ++M++
Sbjct: 148 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 207
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y ++ + C A ++ + + +G+ D+FTY++++ + W+
Sbjct: 208 DVVVYTSIIDSLCKDRQVTEAFNLFSK---MVGQGI-SPDIFTYTSLIHSLCNLCEWKHV 263
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+++ + P+ + +S++++A G + +A + + M+ G EPN N L+
Sbjct: 264 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 323
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A ++F + + + Y+ + ++ DK +
Sbjct: 324 HCLQSEMDEAVKVFDTMVHNGYAPNV-ISYNTLINGYCKIQRMDKATYL----------- 371
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACG 559
F++ + P T TYN LM C + AL +EM G P+ ++ IL+D
Sbjct: 372 --FEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+++ A+ +LK + M PD+ YT I R+ L+ A +F + ++PN+
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 489
Query: 620 TYITLLRARSRYGSLHEVQQ 639
TY ++ R G L E +
Sbjct: 490 TYTIMINGLCRRGLLDEANK 509
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 122/315 (38%), Gaps = 52/315 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV+T + ++ F A V +L G P+T T+++LI G + A+HLF
Sbjct: 103 DVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLF 162
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M+ G +PN L+ + + A RL RS
Sbjct: 163 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS----------------------- 199
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
ME + Q P Y ++ + C D +A L ++M
Sbjct: 200 MEQGNCQ------------------------PDVVVYTSIIDSLCKDRQVTEAFNLFSKM 235
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+SP+ ++T LI + + +L M + PDVV ++T + + ++
Sbjct: 236 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 295
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A + + M ++PN+VTY L+ E+ + + V+ M GY N
Sbjct: 296 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS---EMDEAVKVFDTMVHNGYAPNVISY 352
Query: 660 KELIEEWCEGVIQDK 674
LI +C+ DK
Sbjct: 353 NTLINGYCKIQRMDK 367
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 164/393 (41%), Gaps = 58/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ +
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC-EWKHVTTLLN 268
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ +F+++++ + K T +V M GV ++ +YN L+ CL
Sbjct: 269 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 328
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + H G +V +Y+T++ + + A + E+M + PNT
Sbjct: 329 EMDEAVKVFDTMVH---NGYAP-NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++L++ C + G ++ A+ LF EM+ G P+ ILL + D A L +
Sbjct: 385 VTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK- 442
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T SNM+ P Y
Sbjct: 443 -----------------TIEGSNMD-----------------------------PDIQIY 456
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
I++ C + + + + + + GL PN ++TI+I+ G ++ A ++ M
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+G SPD Y T + +++K +A L +EM
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+ + H P++ R ++D ++ A+ + + N+ +I ++
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ A +L+ +++ N+ G+ ++ +Y I++ C G A +++ E ++
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME---MD 515
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D TY+TI + K A+++ ++ML+ G + + T + L+ + L
Sbjct: 516 GNGC-SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 574
Query: 415 EQAMHLFEEMLQ 426
+ + E +Q
Sbjct: 575 QSVKQILSEFVQ 586
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 185/448 (41%), Gaps = 82/448 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
P++Y C I+ +K + +++ ++ + + N+ FN L+N +L
Sbjct: 947 PSVYTCNMIL------ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNL 1000
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K + K M++ G + + +YN LL C G A E+ + ++ KG+ + DV T
Sbjct: 1001 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL---IDYMICKGI-EADVCT 1056
Query: 366 YSTIVKVFA----DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y+ + AK + + K++++M+S PN +T+++LIN G + A +F
Sbjct: 1057 YNVFIDNLCTNHRSAKAYLLLKKMRKEMIS----PNEVTYNTLINGFVKEGKIGVAAQVF 1112
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + PN N L+ F+ A RL
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL-------------------------- 1146
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
++H + + + TY L+ C + K L+ M
Sbjct: 1147 LDHMEAAGL---------------------RLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R + HI++T+LID +G ++ A+Q++ M +DG++PDV+ Y++ I R +
Sbjct: 1186 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 1245
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
K A + M + N + Y TL+ ++G+ V + + VY M G+ A+
Sbjct: 1246 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN---VTEAMKVYAVMNCNGHGADHFTC 1302
Query: 660 KELIEEWCEGVIQDKNQNQGEVTLCRRT 687
L+ C +D + E LC +
Sbjct: 1303 NVLVSSLC----RDGKLGEAEKFLCHMS 1326
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 179/444 (40%), Gaps = 38/444 (8%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQN 286
+F + L+ +R D H++ +ID G+C + M A+ ++
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIAYT------VLID--GLCKNGMLDEAVQLVGNMYKDG 1224
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V ++ ++SL+N ++K E+ M + G++ + Y+ L+ C GN A
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++Y V + G D FT + +V A K M G+ PN+IT+ +
Sbjct: 1285 KVYA-VMNCNGHGA---DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
IN + G A F++M++ G P+ LL+ + A +
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL----- 1395
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILM 522
G D + M + + N + + FDK + P + TY+ L+
Sbjct: 1396 -----HYIPGAVDSV--MYNTLLAETCKSGNL--HEAVALFDKMVQNNVLPDSYTYSSLL 1446
Query: 523 KACCTDYYRVKALMNEMRTVG---LSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
C V A+ +G L PNH+ +T L+D +G+ + A + M + G
Sbjct: 1447 TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 1506
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD VA+ I C R ++ +A F M+ + + PNL TY LL S+ +L +
Sbjct: 1507 CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL---LR 1563
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
L++Y M + G + LI
Sbjct: 1564 YLSLYSTMMREGIFPDKLTFHSLI 1587
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 200/483 (41%), Gaps = 41/483 (8%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E F +V L KP V Y C +++ + V++ K+ +LV +L + S K +
Sbjct: 935 ETFELVGLVGFKPSV-----YTC-----NMILASMVKD--KRTELVWSLFR-EMSDKGIC 981
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
PN+ +I+ G+C G+ K+ + + + I +N+L+N K
Sbjct: 982 -PNVGTFNILIN--GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ M G+ AD+ +YN+ + C + A + +++ K ++ + TY+T
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR----KEMISPNEVTYNT 1094
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F +A +V +M ++PN +T+++LI + G E+A+ L + M AG
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N LL + +F+ A RL ++ V G+ ++ K
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVV-------GHIAYTVLIDGLCKN 1207
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ + + + Y P TY+ L+ C + K ++ M GL
Sbjct: 1208 GMLDEAVQLVGNMYKD-----GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVL 1262
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I ++ LI GNV A+++ +M +G D + R +L +A
Sbjct: 1263 NKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFL 1322
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
M + PN +TY ++ YGS+ + + + DM K G + L++
Sbjct: 1323 CHMSRIGLVPNSITYDCIING---YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379
Query: 667 CEG 669
C+G
Sbjct: 1380 CKG 1382
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/547 (19%), Positives = 202/547 (36%), Gaps = 106/547 (19%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + C + +G D ++A +D K P+ + +++ G+C G+ +
Sbjct: 1330 LVPNSITYDC-IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK--GLCKGGNLV 1386
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ L ++ ++N+L+ + +L + ++ M + V+ D +Y+ LL
Sbjct: 1387 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 1446
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G V A ++G +G L + Y+ +V + A + A E+M+
Sbjct: 1447 TGLCRKGKAVTAVCLFGTAM---GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G P+T+ ++++I++C+ G + +A F M G PN NILL + R
Sbjct: 1504 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 1563
Query: 452 AFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHK------------------ 485
L+ + L+ + LG G D + K
Sbjct: 1564 YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILIN 1623
Query: 486 ------------DKQSITNTPNFVP-----NSHYSSFDKRFSFK---------------P 513
D + NT P N ++ +K+ +F+ P
Sbjct: 1624 KYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIP 1683
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y L+ C D L +EM +G + ++ + ++ G E A+ +L
Sbjct: 1684 KHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVL 1743
Query: 572 K-----------------------------------IMREDGMSPDVVAYTTAIKVCVRS 596
+M G+ DVVAY I +
Sbjct: 1744 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 1803
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
AF L+EEM+H + PN+ TY L+ A S +L + ++ L Q+ + +
Sbjct: 1804 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGST 1863
Query: 657 TYL-KEL 662
+L KEL
Sbjct: 1864 QHLDKEL 1870
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 169/412 (41%), Gaps = 41/412 (9%)
Query: 258 ICRTI-IDVC-------GICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
IC+ I DVC +C ++ ++A + + +R + ++ N +N+L+N V +
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 1105
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+V+ M K + + +YN L+ C G+ +E + H+EA G L+L+ T
Sbjct: 1106 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF---EEALRLLDHMEAAG-LRLNEVT 1161
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y T++ + +++A ++ E M + I ++ LI+ G++++A+ L M
Sbjct: 1162 YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 1221
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA----FRLFRSWTLSKTQVALGEDYD----GNTD 477
+ G P+ + L+ A R++RS + + Y+ GN
Sbjct: 1222 KDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVT 1281
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILM 522
+ + +F N SS + R P + TY+ ++
Sbjct: 1282 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 1341
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ D + ++M G P+ ++ L+ GN+ A + L + +
Sbjct: 1342 NGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGA 1401
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
D V Y T + +S L +A +LF++M + P+ TY +LL R G
Sbjct: 1402 VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/479 (17%), Positives = 178/479 (37%), Gaps = 67/479 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ + F + ++ A++ Y + + + C ++ G ++
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N ++ ++N + D + +M K G +Y LLK C GN
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
V A++ + ++ +D Y+T++ + A+ + + M+ V P++
Sbjct: 1385 LVEAKKFLNRLHYIPGA----VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440
Query: 400 TWSS------------------------------------LINACANAGLVEQAMHLFEE 423
T+SS L++ + AG + A + FEE
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M++ G P++ N ++ +C Q +A F R W + G + + +
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM---KACCTDYYRVKALMN 537
+ + S YS+ + F T +++++ K+ D VK L+
Sbjct: 1561 LLRYL--------------SLYSTMMREGIFPDKLTFHSLILGLSKSGIPD-LGVK-LLG 1604
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G + ++ ILI+ SG + A ++ M G+ PD Y +
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
+++ + EM + P YITL+ R G ++Q + +M G+ +++
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG---DIQGAFKLKDEMEALGFGSHE 1720
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 219/512 (42%), Gaps = 87/512 (16%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNE---------CQRLLDSG------EVEMFVGLME 179
+L ++ E GV P E GS KL N Q + D G E EMF L +
Sbjct: 443 LLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFP-LGQ 501
Query: 180 VLEEF-------RLPVKELDE-EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
L+ +L +K + E R +L ++K L CIV A +L N +
Sbjct: 502 ALQSPIDTQILNQLLIKRAEAGELREAELLLDK----LVEAGGCIVDTAAVLMINL---Y 554
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G++ A +++ +K P++Y+ T+I +C +C + ++ +++ + +
Sbjct: 555 GRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDA 614
Query: 292 YVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ L++ + +F + K +K+GV D +YN LKA +GN A E+YGE
Sbjct: 615 VTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGE 674
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + + K TY+ ++ +F+ A++ E + S+ V + I +S +I+
Sbjct: 675 MQEADIEPSAK----TYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYG 730
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AG ++A LF+EM G +PN N LL A A F A RL
Sbjct: 731 CAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEA-RLL------------- 776
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+S+M +R P++ TY +LM A +
Sbjct: 777 ---------LSDM------------------------RRKGCPPSSVTYLLLMSAYGSKG 803
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
A L++ M+ GL P+ + +I A G G + A +I ++ G+ ++ +
Sbjct: 804 KPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFR 863
Query: 588 TAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNL 618
T +K+ + + +Q + +++++ + + + NL
Sbjct: 864 TLVKIHLDHGQFEQGWQIYKDLSQSFTVDQNL 895
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 171/390 (43%), Gaps = 58/390 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
+I++ G G + K+++++ L+ ++ ++YV+N+++ + A +L+ + V+ M++ G
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENG 609
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
M D + +IL+ A G + +A G++K
Sbjct: 610 RMFDAVTVSILVHAYTKEG------------RFKDAAGLMK------------------- 638
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A KV GV +T+ +++ + A +G ++ A+ ++ EM +A EP+++ IL
Sbjct: 639 -RAKKV-------GVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTIL 690
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + RA + F L+ ++V D I+ + P +
Sbjct: 691 ISLFSKLGDLGRAVQAFE--VLNSSEVG--------ADEIAYSQMIHCYGCAGRPKEAAD 740
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K FKP YN L+ A + + L+++MR G P+ +++ +L+ A
Sbjct: 741 LFQEMETK--GFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSA 798
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G G A +L +M++ G+ PD Y I+ +L A +F E+K I
Sbjct: 799 YGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLE 858
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L + TL++ +G + +Q +Y+D+
Sbjct: 859 LGCFRTLVKIHLDHG---QFEQGWQIYKDL 885
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 193/455 (42%), Gaps = 43/455 (9%)
Query: 200 LCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
L V K + N + YA I+ + + + G+ D V + A+ HL P+ +
Sbjct: 203 LLVEKLEPNFVL-YAIII--------HILNKEGRTEDAVHTFKDMRAAG-HL--PDELLY 250
Query: 260 RTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQK 317
TII G G Y +S A+Y D++ Q + + + + ++NV + +F E MQ+
Sbjct: 251 NTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQR 310
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G +AD Y ++ AG A++I+ E+ L G+L + +Y+++ KV A+A
Sbjct: 311 SGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTL---GLLSHEK-SYTSMAKVRAEAG 366
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
ALK+ + M G+ +TW++L++ G VEQA ++ +M++AG N
Sbjct: 367 RHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGN 426
Query: 438 IL-----LQACVEACQFDRAFRLFRSWTLSKTQVALG---------EDYDGNTDRISNME 483
++ Q +A + R + + G + D T + M+
Sbjct: 427 MINLYSKFQMVEDA---ENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMK 483
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRT 541
+S+ N P + T N L+ +A + + L++++
Sbjct: 484 DDGLESVCNEREMFP------LGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVE 537
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G + ++I+ G G + A + +++ P + Y T IK+C K L++
Sbjct: 538 AGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEE 597
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A +F+ M+ + VT L+ A ++ G +
Sbjct: 598 AIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKD 632
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 159/372 (42%), Gaps = 52/372 (13%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L Y+A ++ P+ ++ RT+I + + ++EDL + + N ++ ++++
Sbjct: 162 LEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHI 221
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ + + +K+M+ G + D YN ++ A G ++ +Y ++K +G+
Sbjct: 222 LNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKK---QGI 278
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ FTY+ ++ V++ A + A + +M +G + + + S+IN AGL E+A
Sbjct: 279 VP-SKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAE 337
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + + + + EA + A +LF D
Sbjct: 338 KIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLF--------------------DV 377
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
++ +K +T + N+ F + + T YN +++A
Sbjct: 378 MA-----EKGLLTTRMTW--NTLLHCFVRIGDVEQATKVYNDMVEAG------------- 417
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
S N +++ +I+ VE A +L MRE G+ PD Y + +K+ S
Sbjct: 418 ------SANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDM 471
Query: 599 LKQAFSLFEEMK 610
+ +A + +EMK
Sbjct: 472 IDKATMVVQEMK 483
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+T++ ++ A +A + +ML AGV P+ + ++ A A + + +E
Sbjct: 107 VIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYE 166
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M Q G P++ ++ +A + A L+ + K + I N
Sbjct: 167 AMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNF--VLYAIIIHILNK 224
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
E + + ++ + H P YN ++ A Y +AL +M+
Sbjct: 225 EGRTEDAVHTFKDMRAAGHL----------PDELLYNTIICALGKLGRYQESEALYLDMK 274
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ P+ ++TI+I+ +G A + L M+ G D V Y + I + ++ +
Sbjct: 275 KQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYE 334
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+A +F+EM + + +Y ++ + R+ G E + V
Sbjct: 335 EAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDV 377
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 50/277 (18%)
Query: 372 VFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
V + + W+ A + E M L +P+ I +++L+ AG + A EML AG E
Sbjct: 80 VLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVE 139
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ +L+A + W E YD + M +
Sbjct: 140 PDEVAGGCMLEA-------------YARW----------ERYDTLLEFYEAMRQR----- 171
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
VP++H Y ++ ALM ++ L PN
Sbjct: 172 ----GLVPSAH---------------VYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNF 212
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + I+I G E A+ K MR G PD + Y T I + R +++ +L+ +
Sbjct: 213 VLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLD 272
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
MK I P+ TY ++ S+ G + LA Q
Sbjct: 273 MKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQ 309
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 24/294 (8%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+IN GL ++A LF + + P+ N +++ C + + A +F +
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEEN- 608
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G +D T +S + H + T F + K+ T YN +K
Sbjct: 609 -----GRMFDAVT--VSILVH----AYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLK 657
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A AL EM+ + P+ ++TILI G++ A+Q +++ +
Sbjct: 658 ANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGA 717
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D +AY+ I + R K+A LF+EM+ +PN V Y LL A +R G E + L
Sbjct: 718 DEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLL 777
Query: 642 AVYQDMWKAGYKAND-TYLKELIEEWCEGVIQDKN------QNQGEVTLCRRTN 688
+ DM + G + TYL + +G D Q++G CR N
Sbjct: 778 S---DMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYN 828
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM G+ P+ ++ +++A + L+ + MR+ G+ P Y T I +
Sbjct: 130 LSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYK 189
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++R A L+E++ +++PN V Y ++ ++ G + + ++DM AG+ +
Sbjct: 190 AERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEG---RTEDAVHTFKDMRAAGHLPD 246
Query: 656 DTYLKELI 663
+ +I
Sbjct: 247 ELLYNTII 254
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 146/343 (42%), Gaps = 23/343 (6%)
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
++ A DL F L K G+ A+ + N LL C GN +E++ K + +G+
Sbjct: 467 HLEAIDLWFRLA-----DKKGLAANTTTSNALLYGLCERGN---MEEVFPVCKEMVERGL 518
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD +Y+T++ + + A K+KE M+ G P+T T++ L+ A+ G ++
Sbjct: 519 V-LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ E G PN ++L+ A + D A LF +K +++ Y
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELS----YVVYNIL 633
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN-ILMKACCTDYYR-VKALM 536
I+ + + NF + + PT TY+ I+ CC D K +
Sbjct: 634 IA--------AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIF 685
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR GL PN +T LI G ++ IL+ M + + P+ + YT I +
Sbjct: 686 EEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKM 745
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
K+A L EM I P+ VTY L + + L E Q
Sbjct: 746 GNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 175/407 (42%), Gaps = 39/407 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ C ++ + KS +++ + V +++Y + + +N K + +
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 263
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV+ ++ +YN L+ C +G L + + + + +E K + + TY +V
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGR--LEEALMFKGRMVENK--VNPSLVTYGILVN 319
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A V +M S G +PN +++LI+ + G ++ A+ + ++M G +P
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N LLQ Q ++A ++ + LS N D S + H +S
Sbjct: 380 NAVTHNTLLQGFCRTNQMEQAEQVLE-YLLSNVLSV-------NEDACSYVLHLLCKS-- 429
Query: 492 NTPNFVPNSHYSSFDKRF---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
S FD + K + +L+ C ++A+ R
Sbjct: 430 -----------SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLA 478
Query: 543 ---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL+ N + L+ GN+E + K M E G+ D ++Y T I C +S ++
Sbjct: 479 DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKI 538
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++AF L E+M +P+ TY L++ + G + +V + L +D
Sbjct: 539 EEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 129/321 (40%), Gaps = 63/321 (19%)
Query: 355 AKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+KGV LK F S++VK + + +V + M GV + T+++ INA
Sbjct: 199 SKGVFPSLKSCNFLMSSLVK----SNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKG 254
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +++A+ LF +M + G PN N L+ ++ + + A +F+
Sbjct: 255 GKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL-MFKG------------- 300
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DY 529
+ + N N P+ TY IL+ +
Sbjct: 301 ----------------RMVENKVN-----------------PSLVTYGILVNGLVKFEKF 327
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+++ EM + G SPN + LID GN++ AL++ M G+ P+ V + T
Sbjct: 328 DEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTL 387
Query: 590 IKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ R+ +++QA + E + + + +Y+ L +S + L + + +
Sbjct: 388 LQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSS-----KFDSALKIVKAL 442
Query: 648 WKAGYKANDTYLKELIEEWCE 668
K ND+ L L+ C+
Sbjct: 443 LLRNIKVNDSLLTLLVCGLCK 463
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ + N LM + + ++ + + M G+ + ++ I+A G ++ A+ +
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 263
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M E G+ P+VV Y I +S RL++A M ++ P+LVTY L+ +
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 323
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVTL 683
+ E L +M+ G+ N+ LI+ + +G + D + + ++TL
Sbjct: 324 FEKFDEANSVLV---EMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTL 374
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 171/378 (45%), Gaps = 28/378 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + +I+ FN +++ + K F ++ + M + G D+ SY IL+
Sbjct: 100 ALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAG 393
AG A EI+ + + + D + +V A+ +A + V E++ SA
Sbjct: 160 FRAGKVTDAVEIWNAM----IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V + + +++LI+ AG +E+A L M + GCEP+ N+LL + RA
Sbjct: 216 VKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S Q+ Y+ R + H P+ YS K +
Sbjct: 276 GVMTEMVRSGIQLD-AYSYNQLLKRHCRVSH-------------PDRCYSFMLKEMEPRG 321
Query: 514 --TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+Y+ L++ C ++ + L EMR G+ N +++T LI A GN A +
Sbjct: 322 FCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKK 381
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M E G+SPD + YTT + +S + +A+ +F +M ++I P+ ++Y +L+
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLC 441
Query: 630 RYGSLHEVQQCLAVYQDM 647
R G V + + +++DM
Sbjct: 442 RSG---RVTEAIKLFEDM 456
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 158/398 (39%), Gaps = 45/398 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V+ M+ + YN + LA+ IY ++ + L FTYS
Sbjct: 29 VQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMG----FSLIPFTYSR 84
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ K +++ + DM + G P+ ++ ++ V A+ F M+Q G
Sbjct: 85 FISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRIS 480
EP+ IL+ A + A ++ + S + +G + D
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 481 NMEHKD-KQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKA 524
M ++ K + V N+ S F K + +P TYN+L+
Sbjct: 205 EMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLL-- 262
Query: 525 CCTDYY-------RVKALMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMRE 576
+YY R + +M EM G+ + S+ L+ C S +LK M
Sbjct: 263 ---NYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEP 319
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G DVV+Y+T I+ R+ K+A+ LFEEM+ I N+VT+ +L++A R G+
Sbjct: 320 RGFC-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSV 378
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
++ L M + G + + +++ C+ DK
Sbjct: 379 AKKLL---DQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + K ++++ M++ G++ ++ ++ L+KA GN+ +A+++ ++ L L
Sbjct: 338 ASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELG----LSP 393
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+TI+ + A + DM+ +TP+ I+++SLI+ +G V +A+ LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M C P+ ++ + + A++++
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVW 488
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
K+ ++E++R + + N+ F SL+ + ++ ++ M +LG+ D Y +L
Sbjct: 343 KAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +GN A I+ ++ E + D +Y++++ + A+K+ EDM
Sbjct: 403 DHLCKSGNVDKAYGIFNDMIEHE----ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +T+ +I + A ++++M+ G + + L++A
Sbjct: 459 KECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 205/475 (43%), Gaps = 39/475 (8%)
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
+ E L + + E ++ L D L+IR+ V RE +R L
Sbjct: 44 MTELLLSISQTQNELQLYSLLSPYKDRQLSIRFMVSV---------ISRESDWQRSLALL 94
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
D ++ SP+++ ++ + + +++++R++ + + Y +++L+
Sbjct: 95 DWINDIAR---YSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITH 151
Query: 301 NAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
F ++ + M++ V D+ Y+ L++ + A I+ +K G+
Sbjct: 152 FGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKR---SGI 208
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D+ Y++++ VF AK ++ A + ++M GV P+T+++S+L++ +A+
Sbjct: 209 MP-DLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEAL 267
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F EM +A C + CN+++ + A RLF W++ K + R
Sbjct: 268 SVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLF--WSMRKMGIEPNVVSYNTLLR 325
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ T F H ++ + TYN ++K KA LM
Sbjct: 326 VYG----------ETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLM 375
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ G+ PN I+++ +I G +G ++ A + + +R G+ D V Y T I RS
Sbjct: 376 QEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERS 435
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A L E+KH P+ + T ++ +R G +++ V++ + AG
Sbjct: 436 GLVAHAKRLLHELKH----PDSIPRETAIKILARAG---RIEEATWVFRQAFDAG 483
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 146/327 (44%), Gaps = 30/327 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VF Y+ +++ AK W A + ++M + + P+ T+S+LI AG+ + ++ +
Sbjct: 107 VFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQ 166
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD----- 477
+M Q + + L++ + C + +A +F S L Y+ +
Sbjct: 167 QMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVA-YNSMINVFGKA 225
Query: 478 ---RISNMEHKDKQSITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACCT------ 527
R + + K+ + + P+ V S S + + F + + + +A C
Sbjct: 226 KLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTC 285
Query: 528 ----DYY-------RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
D Y L MR +G+ PN +S+ L+ G + A+ + ++M++
Sbjct: 286 NVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQK 345
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +VV Y T IKV +S ++A +L +EM++ I+PN +TY T++ S +G +
Sbjct: 346 KDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII---SIWGKAGK 402
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELI 663
+ + ++Q + +G + + + +I
Sbjct: 403 LDRAAMLFQKLRSSGVEIDQVLYQTMI 429
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 103/236 (43%), Gaps = 10/236 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ +R +G+ A+ + +K N+ T+I V G ++ K+ + ++++
Sbjct: 320 YNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQ 379
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + N +++++++ A L +++ ++ GV D Y ++ A +G
Sbjct: 380 NRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVA 439
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + E+KH D T +K+ A A + A V AG + +
Sbjct: 440 HAKRLLHELKHP--------DSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVF 491
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++ + + +FE+M AG P+S ++L A + +F++A L++
Sbjct: 492 GCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYK 547
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 38/414 (9%)
Query: 293 VFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N+L+ +V A + ++ M G D +YN L+ C G + E V
Sbjct: 190 VYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRG---IVDEAVRLV 246
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +E +G+ + +VFTY+ +V F +A + A ++ + M GV P+ T+ +L++
Sbjct: 247 RQMEGEGI-RPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFR 305
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILL------QACVEACQFDR------------A 452
++A + + L + C+ +L EA +F++ A
Sbjct: 306 CLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTA 365
Query: 453 FRLFRSWTLSKTQVA-LGEDYDGNTDRISNMEHKDK----QSITNTPNFVPNSHYSSFDK 507
F + S L +V+ L E D N +S+ N NF +HY
Sbjct: 366 FGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMV 425
Query: 508 RFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ +YN+++ KA D + + ++ EM+ G PN +++ LI GN
Sbjct: 426 LKGLLSSVMSYNMVIDCFVKAGAVD--KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 483
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V A +LK++ E G PD++ +T+ I + +L AF FEEM + ++PN TY
Sbjct: 484 VHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQN 677
L+ G V + + + M G + LI +C DK ++
Sbjct: 544 LMHTLCSAG---HVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAED 594
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 31/369 (8%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++ EV+ M +LG+ A YN L+ A AG A Y + + A G + D FT
Sbjct: 170 RYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTA---YLRFQQMPADGC-RPDHFT 225
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+++V A+++ M G+ PN T++ L++ NAG VE+A + ++M
Sbjct: 226 YNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMK 285
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G P+ L+ + D+A+R+ W +T + + + + K
Sbjct: 286 EKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACH----TMLYCLSKK 341
Query: 486 D--KQSITNTPNFVPNSHYSSFDKRFSFKP---TTTTYNILMKAC--CTDYYRVKALMNE 538
D K+++ F+KR S + +T + I+M C + + L++
Sbjct: 342 DMAKEAV-------------EFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDS 388
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G +P + ++I + N A L M G+ V++Y I V++
Sbjct: 389 FIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGA 448
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +A + +EM+ PNLVT+ TL+ S+ G++H + V + + + G+ +
Sbjct: 449 VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAK---VVLKMLMEHGFMPDIIT 505
Query: 659 LKELIEEWC 667
LI+ C
Sbjct: 506 FTSLIDGLC 514
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 34/303 (11%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL 318
C + D+C + ++K+ N ++Y+ +N + +M
Sbjct: 376 CLEVSDLCELLDSFIKN--------GGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLK 427
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+++ + SYN+++ AG A+EI VK ++ KG L ++ T++T++ ++
Sbjct: 428 GLLSSVMSYNMVIDCFVKAGAVDKAEEI---VKEMQDKGFLP-NLVTFNTLISGYSKLGN 483
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V + ++ G P+ IT++SLI+ N ++ A FEEM + G PN+Q N+
Sbjct: 484 VHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS--NMEHKDK-QSITNTPN 495
L+ A ++A L K + Y N +S M DK + I N +
Sbjct: 544 LMHTLCSAGHVNKAIDLLNKM---KIDGVTPDAYSFNALILSFCRMRKVDKAEDIFN--D 598
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA----LMNEMRTVGLSPNHISW 551
V RF P + TYN L+KA C + KA E S N W
Sbjct: 599 MV----------RFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYW 648
Query: 552 TIL 554
I+
Sbjct: 649 PIV 651
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 166/410 (40%), Gaps = 66/410 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN R + A R D K+ +P+ RT++ C + K+ + D
Sbjct: 268 FCNAGR-------VEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWL 320
Query: 284 SQNVTLNIYVFNSLMN-VNAHDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+L+ ++++ ++ D+ K +E K M G + D ++ I++ +C L V
Sbjct: 321 GHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVM-SCALKCLEV 379
Query: 342 --LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L + + +K+ G DV Y ++K + K + A M+ G+ + +
Sbjct: 380 SDLCELLDSFIKNGGNPG---FDV--YIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVM 434
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++ +I+ AG V++A + +EM G PN N L+
Sbjct: 435 SYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISG----------------- 477
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK LG ++ MEH F P T+
Sbjct: 478 -YSK----LGNVHNAKVVLKMLMEH-------------------------GFMPDIITFT 507
Query: 520 ILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + A + EM G+ PN ++ +L+ +G+V A+ +L M+ D
Sbjct: 508 SLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID 567
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G++PD ++ I R +++ +A +F +M + + P+ TY +L++A
Sbjct: 568 GVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKA 617
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 173/404 (42%), Gaps = 30/404 (7%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L Q+ N +N+L+ A D++ ++ M++ G D+ +++ +++A C
Sbjct: 94 DELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNT 153
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A + + E VL ++ +V A A ++ E+M G+ P+
Sbjct: 154 GNLSRAMQYFRESVECAPDSVL------FNILVHGLCKANQLSEARQMIEEMSERGIVPD 207
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLF 456
+T++SLI+ + +E+A L E M++ PN N L+ C C A +L
Sbjct: 208 VVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT-GLAHQLI 266
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S T D IS K K I + K+ P
Sbjct: 267 ERMIQSGTH----PDVVTFNSLISGFCQKSK--IDKACEVL------HLMKKGLCAPNLV 314
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN+L+ C D R L++EM G+ P+ I++ LI + +E A QI +
Sbjct: 315 TYNVLISGLC-DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E G+ PD ++Y T ++S+R +AF+L + M PNL T+ +L+
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRR 433
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
L E + LAV M + G + + L+ C+ G + D +
Sbjct: 434 LDEARHLLAV---MRRVGCDPAASTYEVLVTGLCKAGRVDDAKE 474
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 51/279 (18%)
Query: 397 NTITWSSLINACANAGLVEQAMHLF-EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N T + L+ A QA +F +E+L C+ N N L+ +A +RAF+L
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
E K++ P
Sbjct: 128 L-------------------------AEMKER----------------------GHSPDV 140
Query: 516 TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
T++ +++A C +A+ +V +P+ + + IL+ + + A Q+++ M
Sbjct: 141 VTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMS 200
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PDVV Y + I +S R+++A L E M +++PNLVTY TL+ + G
Sbjct: 201 ERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTG 260
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
Q + + M ++G + LI +C+ DK
Sbjct: 261 LAHQ---LIERMIQSGTHPDVVTFNSLISGFCQKSKIDK 296
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 303 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 362
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 363 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 478
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 538
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 539 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 598
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 659 YWTYCLLLK 667
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 190/452 (42%), Gaps = 59/452 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 69 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 126
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ +A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 127 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 186
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 187 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 243 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 302 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 329
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 330 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 433
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++ M + G K ++ L + C+
Sbjct: 434 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 465
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 183/454 (40%), Gaps = 62/454 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 460 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 512
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 513 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 572
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 692
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 693 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 753 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 809
Query: 651 GYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLC 684
GY ++ K ++ D G V +C
Sbjct: 810 GYNHDEVAWK---------ILNDGLLKAGYVDIC 834
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 196/483 (40%), Gaps = 81/483 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL + K+ SPN+ +I G+C G +R +++ + V ++ +N++
Sbjct: 157 ALVLFLMMKRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 214
Query: 298 M--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ + L++ + M+K G D +YN L+ C T A+E+
Sbjct: 215 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----V 269
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA----------------------- 392
K V T++ ++ + A+ + AL++K M+S+
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329
Query: 393 ------------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 389
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
V+ + +A L L+K Q DG + IT T
Sbjct: 390 YGLVKDKKLHKAMAL-----LTKMQK------DGIIPNV----------ITYTTLLQGQC 428
Query: 501 HYSSFDKRF---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
FD F KP Y +L A C +A +R G++ + +
Sbjct: 429 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYY 487
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LID +GN + A +++ M ++G +PD Y+ + + KRL +A + ++M
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGV 670
I+ + Y L+ R G ++ +Y +M +G+K + T I +C EG
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKR---MYNEMTSSGHKPSATTYTVFINSYCKEGR 604
Query: 671 IQD 673
++D
Sbjct: 605 LED 607
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 152/385 (39%), Gaps = 42/385 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY + + G++ D +YN ++K+ C G+ A + L +G L+ + FT + +V
Sbjct: 55 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYF----RLLLEGGLEPETFTCNALV 110
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A + M G N +++ LI +A V +A+ LF M + GC
Sbjct: 111 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCS 170
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L+ ++ + A LF + + ++ +
Sbjct: 171 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSV---------------------M 209
Query: 491 TNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKACCTDYYR-VKALMNEMR 540
T V S + K P TYN L+ C + L+N
Sbjct: 210 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAV 269
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P +++T LI+ + + AL++ M D+ + I ++ RLK
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLK 660
+A L E+ + PN++TY +++ + G +V L V + M + G + N
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSG---KVDIALEVLKMMERDGCQPNAWTYN 386
Query: 661 ELIEEWCEGVIQDKNQNQGEVTLCR 685
L+ G+++DK ++ L +
Sbjct: 387 SLM----YGLVKDKKLHKAMALLTK 407
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 69/280 (24%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK--- 371
M++ GV D+ +YNIL+ C G+ + +K + + + +TY ++K
Sbjct: 615 MEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC-EPNYWTYCLLLKHLL 670
Query: 372 ---------VFADAKWWQMALKVK----EDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
V W + L + E M+ G+ P T+SSLI AG +E+A
Sbjct: 671 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 730
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L + M G PN +L++ C + F++A
Sbjct: 731 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL------------------------- 765
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
+FV S F+P +Y +L+ C D+ +VK+L
Sbjct: 766 ----------------SFV------SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 803
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ +G + + ++W IL D +G V+ Q+L IM +
Sbjct: 804 CDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 843
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N +L T ++ + M K G+ + +Y+ L+ C AG +E + H+ KG L
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL---EEACLLLDHMCGKG-LS 742
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Y+ ++K D K+++ AL M G P ++ L+ N G E+ L
Sbjct: 743 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 802
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
F ++L+ G + IL ++A D F++
Sbjct: 803 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,702,345,144
Number of Sequences: 23463169
Number of extensions: 424885417
Number of successful extensions: 1239114
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7749
Number of HSP's successfully gapped in prelim test: 3517
Number of HSP's that attempted gapping in prelim test: 1058016
Number of HSP's gapped (non-prelim): 107115
length of query: 750
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 600
effective length of database: 8,839,720,017
effective search space: 5303832010200
effective search space used: 5303832010200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)