BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004480
(750 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYL7|PP361_ARATH Pentatricopeptide repeat-containing protein At5g02830,
chloroplastic OS=Arabidopsis thaliana GN=At5g02830 PE=2
SV=3
Length = 852
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/753 (56%), Positives = 544/753 (72%), Gaps = 18/753 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNSS-FTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAA 709
AGYK ND +LKELIEEWCEGVIQ+ Q+Q +++ N+ RP SLL+EKVA H+Q+ A
Sbjct: 661 AGYKPNDHFLKELIEEWCEGVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTA 720
Query: 710 ENLAIDLRGLTKVEARIIVLAVLRMMKENYSLG 742
NLAIDL+GLTK+EAR++VLAVLRM+KE+Y G
Sbjct: 721 GNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRG 753
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 21/349 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE 661
++P++VTY T++ G LHEV+ A+Y M + G ND L +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEGLMKNDCTLSD 510
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ LI+ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L A + G + E ++ ++++M + + LI C I + NQ
Sbjct: 267 LDAFVKNGKVLEAKE---LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +N L+ A Y V +L +M +G+ + ++ I+I+ V AL I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PD V + + R R+ A SL ++M +P++V Y ++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
V ++++ + G + N L+ C
Sbjct: 203 T---KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 193/444 (43%), Gaps = 59/444 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + ++++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I+ ++ ++A F M P++ T+ +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 646 DMWKAGYKANDTYLKELIEEWCEG 669
D +G N IE + +G
Sbjct: 520 D---SGIPRNRDTFNAQIEAYKQG 540
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 52/463 (11%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + +I +N+L++ A L E V++ M G++ D+ +Y+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV-- 289
Query: 334 CCLAGNTVLAQEIYGEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
E +G+++ LE A G D+ +Y+ +++ +A + + A+
Sbjct: 290 -----------ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +AG TPN T+S L+N +G + LF EM + +P++ NIL++
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNS 500
E F LF + + E Y+G H+D + I + VP+S
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDM-ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 501 H-YSSFDKRF-------------------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
Y+ + F P+ T++ L+ + +A+++
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G+ N ++ I+A G E A++ M + PD + V ++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + FEEMK I P+++ Y +L + +V + L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 55/304 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N + P+ TYN ++ AC D+ + L
Sbjct: 202 MKNEK---------------------------ISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG N
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAGCTPN 351
Query: 656 -DTY 658
+TY
Sbjct: 352 ANTY 355
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 51/321 (15%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K+++ + K + Y+ ++ + L+V ++M S GV+ + ++++LINA
Sbjct: 129 KYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGR 188
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G E ++ L + M P+ N ++ AC G
Sbjct: 189 NGRYETSLELLDRMKNEKISPSILTYNTVINACARG----------------------GL 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D++G + M H+ Q P TYN L+ AC
Sbjct: 227 DWEGLLGLFAEMRHEGIQ------------------------PDIVTYNTLLSACAIRGL 262
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A M M G+ P+ +++ L++ G +E +L M G PD+ +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ +S +K+A +F +M+ PN TY LL + G +V+Q ++ +M
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ---LFLEMK 379
Query: 649 KAGYKANDTYLKELIEEWCEG 669
+ + LIE + EG
Sbjct: 380 SSNTDPDAATYNILIEVFGEG 400
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 213/480 (44%), Gaps = 53/480 (11%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I G+ + +++ + ++ N+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + ++ ++M G+ ++ SYN+++ C G +E+ +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G+TP+ IT++SLI++ A
Sbjct: 300 EMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +AM ++M G PN + L+ + + A+R+ R S + V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ + +P+ V S S F + +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L EM VGL P+ ++T LI+A G++
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY--- 621
E ALQ+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 622 ------------ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
++L++ G + E Q V++ M +K + T +I C
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQ---VFESMLGKNHKPDGTAYNIMIHGHCRA 653
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)
Query: 316 QKLGVMADMASYNILLKACCLAG-NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
Q G M + SYN +L A + N A+ ++ E+ LE++ + +VFTY+ +++ F
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LESQ--VSPNVFTYNILIRGFC 216
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A +AL + + M + G PN +T+++LI+ ++ L M G EPN
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 435 CCNILLQA-CVEACQFDRAFRLF----RSWTLSK-TQVALGEDY--DGNTDRISNMEHKD 486
N+++ C E + +F L R ++L + T L + Y +GN + M H +
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM-HAE 335
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
R P+ TY L+ + C + R +++MR GL
Sbjct: 336 ML-------------------RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++T L+D G + A ++L+ M ++G SP VV Y I + +++ A +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ E+MK + P++V+Y T+L R ++V + L V ++M + G K + LI+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRS---YDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 665 EWCE 668
+CE
Sbjct: 494 GFCE 497
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 36/330 (10%)
Query: 350 VKHL-EAKGVLKLDVFTYSTIVKVFADAKW-WQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ HL +A G + V +Y+ ++ +K A V ++ML + V+PN T++ LI
Sbjct: 156 IVHLAQAHGFMP-GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG ++ A+ LF++M GC PN N L+ + + D F+L RS L +
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 468 L--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
L G +G +S FV + ++R + TYN
Sbjct: 275 LISYNVVINGLCREGRMKEVS---------------FV----LTEMNRR-GYSLDEVTYN 314
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+K C + +++ + EM GL+P+ I++T LI + +GN+ A++ L MR
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ YTT + + + +A+ + EM P++VTY L+ G +
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM--- 431
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ +AV +DM + G + ++ +C
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 123/586 (20%), Positives = 241/586 (41%), Gaps = 93/586 (15%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIRE-----------GRIDCVVGVLKK 138
+ ++++ + S+ N+S FA + EM+ S + ++ G ID + + K
Sbjct: 172 YNAVLDATIRSKRNIS-FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 139 LNELGVAPL-----ELFDG--------SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ G P L DG GFKLL++ + L+ + V + + E R
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
+ +E V +N+ +L ++ + ++ + K+ + AL +
Sbjct: 291 M------KEVSFVLTEMNRRGYSLD----------EVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
+H +P++ ++I G+ ++ + +R + + N + +L++ +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ V + M G + +YN L+ C+ G ++ ++ ++ KG L DV
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM---EDAIAVLEDMKEKG-LSPDV 450
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+YST++ F + AL+VK +M+ G+ P+TIT+SSLI ++A L+EE
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML+ G P+ L+ A C+E ++A +L + + D + I+ +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEG-DLEKALQLHNEMV----EKGVLPDVVTYSVLINGL 565
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYRVKAL 535
+KQS T KR K P+ TY+ L++ C ++
Sbjct: 566 ---NKQSRTREA------------KRLLLKLFYEESVPSDVTYHTLIENCSNIEFK---- 606
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
S LI G + A Q+ + M PD AY I R
Sbjct: 607 --------------SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +++A++L++EM + VT I L++A + G ++E+ +
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 200/495 (40%), Gaps = 64/495 (12%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNF-----------VREFGKKRDLVSALRAYDAS 247
Q+ N N+ IR C D+ F V + D LR D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 248 KKHLSS-------PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
K L S PN+ +I+ G+C G + + ++ + +L+ +N+L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVIN--GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ F L ++ M + G+ + +Y L+ + C AGN A E +++ +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR---VR 374
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+T+V F+ + A +V +M G +P+ +T+++LIN G +E
Sbjct: 375 GLCP-NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + E+M + G P+ + +L + D A R+ R + + D +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGIKPDTITYS 489
Query: 477 DRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRV 532
I + + K++ + R P TY L+ A C D +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEML----------RVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ-ILKIMREDGMSPDVVAYT---- 587
L NEM G+ P+ +++++LI+ A + +LK+ E+ + DV +T
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 588 ----------TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ IK + +A +FE M +P+ Y ++ R G ++
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG---DI 656
Query: 638 QQCLAVYQDMWKAGY 652
++ +Y++M K+G+
Sbjct: 657 RKAYTLYKEMVKSGF 671
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 213/458 (46%), Gaps = 32/458 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + +I+E++R+ NI FN+ + + + KFT +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F EM++ I P+++TY T + + Y + ++ + V + M K G + N +++
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 666 WCEGVIQDKNQNQGEVTLCRRTNSQRPQS---LLLEKV 700
+C+ + K++ + V R + P+ LLE++
Sbjct: 779 YCK--LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERI 814
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 194/444 (43%), Gaps = 36/444 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GK+ + SA ++ ++ S ++Y ++I G Y ++ +++ +
Sbjct: 183 LGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPT 242
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ +N ++NV + + M+ G+ D +YN L+ CC G+ L QE
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGS--LHQEAA 299
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ ++A G D TY+ ++ V+ + + A+KV +M+ G +P+ +T++SLI+A
Sbjct: 300 QVFEEMKAAG-FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
A G++++AM L +M + G +P+ LL A + + A +F +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T A + Y GN + + M I + N P T+N L
Sbjct: 419 ICTFNAFIKMY-GNRGKFTEM-----MKIFDEINVC------------GLSPDIVTWNTL 460
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + V + EM+ G P ++ LI A G+ E A+ + + M + G+
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A Y + E+
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA---YANGKEIGL 577
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
++ ++++ + LK L+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLV 601
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 197/458 (43%), Gaps = 30/458 (6%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D+ + + F + + SA+ ++ + PN+ I + G G + +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I++++ ++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAY 499
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G+ A +Y + + GV D+ TY+T++ A W+ + KV +M
Sbjct: 500 SRCGSFEQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDR 451
PN +T+ SL++A AN + L EE+ EP + L+ C + + +R
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
AF + S L S + ++ + N V + + K F
Sbjct: 616 AFSELKERGFSPDITTLN----------SMVSIYGRRQMVAKANGVLD-----YMKERGF 660
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + + A +
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I MR G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKE-LIEEW 666
+ E + + +++ K D L E ++++W
Sbjct: 781 KLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKKW 818
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQA 417
LDV++Y++++ FA++ ++ A+ V + M G P IT++ ++N G +
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
L E+M G P++ N L+ C A ++F A G YD T
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK------AAGFSYDKVTY 317
Query: 478 R----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ H+ K+++ V N F P+ TYN L+ A D +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLN----------GFSPSIVTYNSLISAYARDGMLDE 367
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L N+M G P+ ++T L+ +G VE A+ I + MR G P++ + IK
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + +F+E+ + P++VT+ TLL + G EV V+++M +AG
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRAG 484
Query: 652 YKANDTYLKELIEEW 666
+ LI +
Sbjct: 485 FVPERETFNTLISAY 499
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E+++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRN---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ N ++ G S + S+T LI A SG A+ + K M EDG P ++ Y + V
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 595 R-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ + SL E+MK I P+ TY TL+ R GSLH Q+ V+++M AG+
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR-GSLH--QEAAQVFEEMKAAGFS 311
Query: 654 ANDTYLKELIE 664
+ L++
Sbjct: 312 YDKVTYNALLD 322
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+I G G V A + ++EDG S DV +YT+ I S R ++A ++F++M+
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 613 QIQPNLVTYITLLRARSRYGS 633
+P L+TY +L + G+
Sbjct: 238 GCKPTLITYNVILNVFGKMGT 258
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 29/405 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 566
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 671
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++PN+ TY TL++ +R SL E + L+ Y++M G K +
Sbjct: 792 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMGIKPD 833
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 715
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 716 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 191/464 (41%), Gaps = 63/464 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSS 504
K V L + + NM+ K+ Q + + P F+P + + S
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
D R S + PT T+N L+ KA +++EM G+S N ++
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
I N Y L+ +R G + E + Q M K G K +
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 763
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 675 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 783
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 784 ----------------TQTIEEME------------------------ALGVKPNIKTYT 803
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 863
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 864 KEMVEAGLIVDM 875
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 21/291 (7%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ + E + P+ + ++ G + +A FE M G P S+
Sbjct: 294 WQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 349
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A D A R +++L Y S H +
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSL-VTYSVIVGGFSKAGHAEAAD--------- 399
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
++ KR + Y ++ A C + R +AL+ EM G+ + ++D
Sbjct: 400 --YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + L + K ++E G +P VV Y I + + ++ +A + MK ++
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
NL TY ++ + L + AV++DM K G K + +I +C
Sbjct: 518 NLKTYSMMING---FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 193/484 (39%), Gaps = 88/484 (18%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQD 673
QPN+VTY ++ +G + +++ CL + + M G N + LI+ C+ D
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 674 KNQN 677
N
Sbjct: 832 VAHN 835
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 57/440 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ YD D + + D+
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV----YDALIDGLCKVGKLDEA 693
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
T F T TY+ L+ Y++VK ++++M
Sbjct: 694 QEVKTEM-----------SEHGFPATLYTYSSLIDR----YFKVKRQDLASKVLSKMLEN 738
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+PN + +T +ID G + A +++++M E G P+VV YT I +++
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWK---AGY-KANDT 657
L E M + PN VTY L+ + G+L L + Q W AGY K +
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 658 YLKELIEEWCEGVIQDKNQN 677
+ KE IE G++ + Q+
Sbjct: 859 FNKEFIESL--GLLDEIGQD 876
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 183/482 (37%), Gaps = 120/482 (24%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC------------GD- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG---FC 650
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQNQGEV---------- 681
H V++ + M G + N LI+ C+ G + + + + E+
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 682 ---TLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAID---LRGLTKVEARIIVLAVLRMM 735
+L R + Q L + ++ L+ S A N+ I + GL KV +++MM
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 736 KE 737
+E
Sbjct: 771 EE 772
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 64/380 (16%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + + +++ AF LFEEMK + ++ TY ++ + + G ++Q + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL---IEQARKWFNE 543
Query: 647 MWKAGYKANDTYLKELIEEW 666
M + G N LI +
Sbjct: 544 MREVGCTPNVVTYTALIHAY 563
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 153/380 (40%), Gaps = 56/380 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+LR TL + + SL V TL +N + D Y L+ C A
Sbjct: 265 NLRMDGFTLRCFAY-SLCKVGKWREALTLVETENF-----VPDTVFYTKLISGLCEAS-- 316
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L +E + + A L +V TYST++ + K +V M+ G P+
Sbjct: 317 -LFEEAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++A +G A L ++M++ G P NIL+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG------------------- 415
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF----------DKRFS 510
++ D D + ++ K + + + SSF +K FS
Sbjct: 416 ------SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM+ GL + ++TI++D+
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G +E A + MRE G +P+VV YT I +++K++ A LFE M PN+V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 620 TYITLLRARSRYGSLHEVQQ 639
TY L+ + G + + Q
Sbjct: 590 TYSALIDGHCKAGQVEKACQ 609
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 507 KRFSFKPTTTTYNILMKACC-TDYYRVKALMN-EMRTVGLSPNHISWTILIDACGGSGNV 564
K F F+P+ +TYN L++A D +L++ EM L + + + G
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL +++ + PD V YT I + ++A M+ PN+VTY TL
Sbjct: 287 REALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 625 LRARSRYGSLHEVQ--QCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L G L++ Q +C V M G + L+ +C
Sbjct: 344 L-----CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 176/402 (43%), Gaps = 35/402 (8%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 304 CTARKLDCAKEVFEKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
LF + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 480 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+G PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G ++Q+ + +++ M + G N L + C+
Sbjct: 582 GLGKNG---KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 233/538 (43%), Gaps = 99/538 (18%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + ID V+G+LK++ LG+ P + + +G +++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 282 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFEKMKTGRHKPD---RVT 330
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 331 YITLLDR-----------FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 496
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ GCEP+ N L+ +A +
Sbjct: 497 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 555 DEAWKMFMRM-----------------------------------------------KEM 567
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 41/362 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH G L + TY+ ++
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + S G P+ T++ L++A +G +++ L++EM CE N+
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 913
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
+ + +P YNIL+ KA D AL M G+
Sbjct: 914 FEGMLD-------------YGCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 958
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L K ++E G++PDVV Y I +S RL++A L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F EMK + I P+L TY +L+ G + E + +Y ++ +AG + N LI
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAGLEPNVFTFNALIR 1075
Query: 665 EW 666
+
Sbjct: 1076 GY 1077
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 170/395 (43%), Gaps = 61/395 (15%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G E+Y E+ E + + T++ ++ A AL + D++S
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEA----NTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE ML GC PN NIL+ +A + D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 944 AACALFKRMV--------------------------KEGV-------------------- 957
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P TY++L+ C + L E++ GL+P+ + + ++I+ G S +E AL
Sbjct: 958 -RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 569 QILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M+ G++PD+ Y + I + +++A ++ E++ ++PN+ T+ L+R
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
S G + + AVYQ M G+ N ++L
Sbjct: 1077 YSLSG---KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 25/349 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + D +Y + K+ + G L Q Y K E VL + ++Y+ ++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGG--LKQAPYALRKMREFGFVL--NAYSYNGLI 195
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +++ A++V M+ G P+ T+SSL+ ++ M L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I ++ A + + A+ + + G D T I + K
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRM----DDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F+K + KP TY L+ D VK +EM G P
Sbjct: 312 AK----------EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++TIL+DA +GN A L +MR+ G+ P++ Y T I +R RL A LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ ++P TYI + YG + L ++ M G N
Sbjct: 422 GNMESLGVKPTAYTYIVFI---DYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P+ TY+ LM D V L+ EM T+GL PN ++TI I G +G + A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ILK M ++G PDVV YT I +++L A +FE+MK + +P+ VTYITLL
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
S L V+Q + +M K G+ + L++ C+
Sbjct: 338 FSDNRDLDSVKQ---FWSEMEKDGHVPDVVTFTILVDALCK 375
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 197/499 (39%), Gaps = 82/499 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 287 VTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +M + ++ +++ M + G D+ N L+ A A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ +K ++ LK V TY+T++ Q A+++ E M+ G PNTIT+++L
Sbjct: 559 KMFMRMKEMK----LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 405 INA-CANA----------------------------------GLVEQAMHLFEEMLQAGC 429
+ C N G V++AM F +M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------------------------------ 459
P+ LL V+A + A+++ ++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S+ VA G DG++ + + + K + + + + F K +P TYN
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSG----ARTLFEKFTKDLGVQPKLPTYN 789
Query: 520 ILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ D + + + ++++ G P+ ++ L+DA G SG ++ ++ K M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + + I V++ + A L+ + M P TY L+ S+ G L+E
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 637 VQQCLAVYQDMWKAGYKAN 655
+Q +++ M G + N
Sbjct: 910 AKQ---LFEGMLDYGCRPN 925
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK----ESGLNP 994
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + +++L+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N +H L+ L ++ M+ G+ D+ +YN L+ +AG A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1052 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 404 LIN 406
L N
Sbjct: 1108 LPN 1110
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 196/472 (41%), Gaps = 93/472 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 391 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 494
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 495 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G K +
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSGCKPD 688
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 637
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 638 AFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 688 DRKARSMLRSA 698
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 219 RADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D F N V + FGK L A+ +D P+ T+ID G ++ +
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE- 499
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+++ M++ G + +YNI++
Sbjct: 500 --------------------------------EMFEAMERRGCLPCATTYNIMI------ 521
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + ++K L +++G+L +V T++T+V V+ + + A++ E+M S G
Sbjct: 522 -NSYGDQERWDDMKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P++ +++LINA A GL EQA++ F M G +P+ N L+ A E + AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 286 SKALQLLGMAQ 296
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 205/485 (42%), Gaps = 43/485 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPR-----------------ADIL-FCNFVREFGKKR 235
EF V +C N N+ I + C + R D++ + V + +
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 354
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 411
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 412 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 520
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 695
Query: 651 GYKAN 655
G A+
Sbjct: 696 GLAAD 700
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 253 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 426
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ +EM +QP +VT+ L+ +G L + ++ L M G N T L+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW---MLAKGIAPNATTFNSLV 603
Query: 664 EEWC 667
+++C
Sbjct: 604 KQYC 607
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 34/294 (11%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILL----QACVEACQFDRAFRLFRS----WTLSK 463
GL+ +A +FE+ML G + CN+ L + C + FR F W ++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 464 TQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNS-------HYSSFDK------- 507
+ + + RI H + TP+ + S + DK
Sbjct: 249 YNIVI--HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 508 --RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R KP + Y ++ C + +EM G+ P+ + +T LID G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + M ++PDV+ YT I + + +A LF EM ++P+ VT+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
L+ + G + + V+ M +AG N LI+ C EG + N+
Sbjct: 427 LINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 171/418 (40%), Gaps = 62/418 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ TI+ G ++ + + + ++ ++ + L+ D + ++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G D+ +YN+L+ C G E + + + G + +V T++ I+
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRL---DEAIKFLNDMPSSGC-QPNVITHNIIL 316
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M Q GC+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PNS N LL + + DRA
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLE--------------------------------- 403
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
V Y P TYN ++ A C D A ++N++ + G SP
Sbjct: 404 ----RMVSRGCY----------PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ +ID +G A+++L MR + PD + Y++ + R ++ +A F E
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 609 MKHYQIQPNLVTY--ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ I+PN VT+ I L +SR + + + M G K N+T LIE
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSR-----QTDRAIDFLVFMINRGCKPNETSYTILIE 562
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 39/387 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+++ C AG EI + L+ V DV TY+TI++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAG------EINNALSVLDRMSV-SPDVVTYNTILRSLC 215
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
D+ + A++V + ML P+ IT++ LI A C ++G V AM L +EM GC P+
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDV 274
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------VALGEDYDGNTDRIS 480
N+L+ + + D A + S Q + G D ++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK-LLA 333
Query: 481 NMEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDY 529
+M K T N + N +K + +P + +YN L+ C +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A+ + M + G P+ +++ ++ A G VE A++IL + G SP ++ Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I ++ + +A L +EM+ ++P+ +TY +L+ SR G +V + + + +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG---KVDEAIKFFHEF 510
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDK 674
+ G + N ++ C+ D+
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 57/289 (19%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
K E+M+ G P+ I ++LI G +A + E + +G P+ N+++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + + A +
Sbjct: 181 GYCKAGEINNALSVL--------------------------------------------- 195
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTILIDAC 558
R S P TYN ++++ C D ++K M + M P+ I++TILI+A
Sbjct: 196 -----DRMSVSPDVVTYNTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G +PDVV Y + + RL +A +M QPN+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+T+ +LR+ G + ++ LA DM + G+ + LI C
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLA---DMLRKGFSPSVVTFNILINFLC 355
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 141/345 (40%), Gaps = 63/345 (18%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R + T ++ +N L+N L ++ +M G ++ ++NI+L++ C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 336 LAGNTVLAQEIYGE----------------VKHLEAKGVL--KLDVF------------- 364
G + A+++ + + L KG+L +D+
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ F K A++ E M+S G P+ +T+++++ A G VE A+ + ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNT 476
GC P N ++ +A + +A +L + T++ + + G +G
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL- 535
D H+ F+ R +P T+N +M C +A+
Sbjct: 501 DEAIKFFHE-------------------FE-RMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ M G PN S+TILI+ G + AL++L + G+
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C + RAI E + S+ +I +N+++ D K +E+ + G
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ +YN ++ AG T A ++ E++ + LK D TYS++V + A
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD----LKPDTITYSSLVGGLSREGKVDEA 503
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K + G+ PN +T++S++ + ++A+ M+ GC+PN IL++
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 36.2 bits (82), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E + L+ M G PD++ TT I+ R + ++A + E ++ P+++T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDM 647
Y ++ + G E+ L+V M
Sbjct: 175 YNVMISGYCKAG---EINNALSVLDRM 198
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 198/479 (41%), Gaps = 55/479 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 243 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 353
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 354 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 470 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F+EM +QPN V Y L+RA R G L L + +DM G N LI+
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKGISPNSATYTSLIK 701
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 480 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 593
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 654 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 687
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 688 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 450
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 749
Query: 641 L 641
L
Sbjct: 750 L 750
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 56/357 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 558
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 655
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 656 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
EM + PN +TY ++ +R G++ E + L +M + G + KE I
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 805
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 607 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 666
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 723
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 724 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 779
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 780 TEASRLLNEMREKGIVPDS 798
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M G++PN +++ +ID G G + A + M E GM P ++ Y+ +K
Sbjct: 295 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 354
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R+KR+ A+ + +EM PN++ Y L+ + GSL+ + + + M G
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---KAIEIKDLMVSKGLSL 411
Query: 655 NDTYLKELIEEWCEGVIQDK-------------NQNQGEVT 682
+ LI+ +C+ D N NQG T
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 288
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
L++ +R + V ++M K G+ N LI+ + E
Sbjct: 349 LVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 276
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 384
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 385 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 37/310 (11%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ CNILL + V A +F + F
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-------------------- 262
Query: 477 DRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS------FKPTTTTYNILMKAC--CT 527
D + D T N F K FS P T+N ++ C
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +M G+ P I+++IL+ + + A +LK M + G P+V+ Y
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + L +A + + M + TY TL++ + G ++ L ++M
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEM 439
Query: 648 WKAGYKANDTYLKELIEEWCEGVIQDKN-QNQGEVTLCRRTNSQRPQSLLLEKVAVHLQK 706
G+ N +I C ++ D + GE+ L + P LL + L K
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL----RNMSPGGGLLTTLISGLCK 495
Query: 707 SAAENLAIDL 716
+ A++L
Sbjct: 496 HGKHSKALEL 505
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G KAN T L +++
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 165/430 (38%), Gaps = 82/430 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 129 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYG--------------------EVKHLEAKGV------- 358
Y++++ AGN A++++ E + E +
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS 308
Query: 359 -LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ DV +Y+ ++K + A+ + AL V E+ML AGV P ++ L++A A +G+VEQA
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M + P+ +L A V A + A + F+ + DG
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-----------DG--- 414
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKAL 535
F+P TY L+K A D ++ +
Sbjct: 415 ---------------------------------FEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+MR G+ N T ++DA G N AL K M G+ PD A + +
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 501
Query: 596 SKRLKQAFSL 605
L++A L
Sbjct: 502 QDELEEAKEL 511
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
M+ +P+ +TY +L+ E ++ D K+ K +
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 181/440 (41%), Gaps = 61/440 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++++ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKAGYKA 654
+ AV ++ KA + A
Sbjct: 849 EQAAIVGAVLRETGKARHAA 868
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 230/546 (42%), Gaps = 59/546 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L+V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E+M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
I+ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + RL +A+ LFEE K +I+ N+V Y +L+ +G + + + + +++ +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG---FGKVGRIDEAYLILEELMQ 685
Query: 650 AGYKAN 655
G N
Sbjct: 686 KGLTPN 691
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALKVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAND 656
++L +A ++FEEM + P+ +T+ +L+ + G V VY+ M + + N
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKVYEKMLDSDCRTNS 482
Query: 657 TYLKELIEEW 666
LI+ +
Sbjct: 483 IVYTSLIKNF 492
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNLYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ CV+A + + + + K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 55/367 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + A ++ E ++ KG+ + DV
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE---MDNKGI-RPDV 293
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-LVE------- 415
FTYS+++ + W A ++ DM+ + PN +T+S+LI+A G LVE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 416 ---------------------------QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+A H+FE M+ C PN + L++ +A +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDK 507
+ LFR +S+ + GNT + + H Q+ + V S
Sbjct: 414 VEEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---- 461
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYNIL+ C + KA++ ++ + P+ ++ I+I+ +G VE
Sbjct: 462 -VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ + G+SP+V+AY T I R ++A SL ++MK PN TY TL+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 626 RARSRYG 632
RAR R G
Sbjct: 581 RARLRDG 587
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 186/418 (44%), Gaps = 35/418 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I FN L++ A KF L + + MQ LG+
Sbjct: 66 DAVDLFGDMVKSRPFP----------SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +Y+I + C LA + ++ L + D+ T S+++ + +K
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLSSLLNGYCHSKRISD 171
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T T+++LI+ +A+ L ++M+Q GC+P+ ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + +H D + N
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLCKYKHMD-----DALNL----- 280
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TY+ L+ +C +Y R L+++M ++PN ++++ LIDA
Sbjct: 281 FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQ 676
VTY TL++ + V++ + ++++M + G N LI + + D Q
Sbjct: 399 VTYSTLIKG---FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 68/402 (16%)
Query: 220 ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
AD++ N + K + + AL + P+++ ++I G + + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
D+ + + N+ F++L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ E KH+ + K +V TYST++K F AK + +++ +M G
Sbjct: 376 -------HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ NT+T+++LI+ A + A +F++M+ G PN NILL + + +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+F + +R + +P
Sbjct: 489 VVFE-----------------------------------------------YLQRSTMEP 501
Query: 514 TTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYNI+++ C D + L + G+SPN I++ +I G+ E A
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWE---LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+LK M+EDG P+ Y T I+ +R + + L +EM+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 61/337 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 381
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +Y+ L+K C A E++ E+ G + TY+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYT 437
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T++ L++ G + +AM +FE + ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF + +L
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS---------------------- 535
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
P YN ++ C + +A L+ +M+ G
Sbjct: 536 -------------------------PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
PN ++ LI A G+ E + +++K MR G + D
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 154/375 (41%), Gaps = 65/375 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD------ 362
L V+ N+Q +G + S+ L + C + A Y E+ ++K+D
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71
Query: 363 -----------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ ++ A +++ + + E M + G++ + T+S IN
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+ + +M++ G EP+ + LL + + A VAL
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA-------------VAL--- 175
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D++ M +K P++ F+F TT + + + ++
Sbjct: 176 ----VDQMVEMGYK------------PDT--------FTF--TTLIHGLFLHNKASE--- 206
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL+++M G P+ +++ +++ G+++ AL +LK M + + DVV Y T I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ K + A +LF EM + I+P++ TY +L+ YG + + L+ DM +
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS---DMIERK 323
Query: 652 YKANDTYLKELIEEW 666
N LI+ +
Sbjct: 324 INPNVVTFSALIDAF 338
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ A+ + M + P +V + + + + + SL E+M+ I +L TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ R L LAV M K GY+ + L L+ +C
Sbjct: 124 FINCFCRRSQL---SLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 35/408 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ G +KSR + +I+ FN L++ A KF L + + MQ+LG+
Sbjct: 68 DAIGLFGGMVKSRPL----------PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D AF L +K + + Y D + H+D +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANV-VIYSTVIDSLCKYRHEDDAL----------NL 282
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ + + +P TY+ L+ +C +Y R L+++M ++PN +++ LIDA
Sbjct: 283 FTEMENK-GVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
VTY TL+ + + + + ++++M + G N LI +
Sbjct: 401 VTYNTLING---FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 35/369 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G ++ +Y +++ C G+ LA + + +EA + + +V YST++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLA---FNLLNKMEAAKI-EANVVIYSTVIDSLC 271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ AL + +M + GV PN IT+SSLI+ N A L +M++ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N L+ A V+ + A +L YD R + + S+ N
Sbjct: 332 TFNALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 373
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TYN L+ C R+ L EM GL
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK-AKRIDEGVELFREMSQRGLV 432
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M DG+ P+++ Y T + ++ +L++A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
FE ++ +++P + TY ++ + G +V+ ++ + G K + +I
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 666 WCEGVIQDK 674
+C ++++
Sbjct: 550 FCRKGLKEE 558
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 26/371 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + N+ +++++++ L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV ++ +Y+ L+ C A + ++ +E K + +V T++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--IERK--INPNVVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ +A + D LFR +S+ + GNT + + H Q+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFRE--MSQRGLV------GNTVTYTTLIHGFFQA 448
Query: 490 IT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ V S P TYN L+ C + KA++ ++ + P
Sbjct: 449 RDCDNAQMVFKQMVSD-----GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ I+I+ +G VE + + G+ PDV+ Y T I R ++A +LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 607 EEMKHYQIQPN 617
+M+ P+
Sbjct: 564 RKMREDGPLPD 574
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M R +L + V V N L DL F L M+ + A++ Y+ +
Sbjct: 214 DRMVQRGCQPNLVTYGV-----VVNGLCKRGDIDLAFNL--LNKMEAAKIEANVVIYSTV 266
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ + C + A ++ E +E KGV + +V TYS+++ + + W A ++ DM+
Sbjct: 267 IDSLCKYRHEDDALNLFTE---MENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ PN +T+++LI+A G + +A L++EM++ +P+ + L+ + D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F ++ + +D N + + N K K+ F S
Sbjct: 383 EAKHMF--------ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++ TT + C + + + +M + G+ PN +++ L+D +G +E A
Sbjct: 435 TVTY--TTLIHGFFQARDCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + + ++ M P + Y I+ ++ +++ + LF + ++P+++ Y T++
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G E A+++ M + G
Sbjct: 550 FCRKGLKEEAD---ALFRKMREDG 570
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 383
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+ C A E++ E+ G + TY+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG----NTVTYT 439
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T+++L++ G +E+AM +FE + ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
EP NI+++ +A + + + LF S +L +
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 29/313 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+F ++ ++ A K + + + + E M G++ N T++ LIN + A+ L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EP+ + LL + R+ + L V +G Y +T + +
Sbjct: 145 KMMKLGYEPSIVTLSSLLNG------YCHGKRISDAVALVDQMVEMG--YRPDTITFTTL 196
Query: 483 EH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
H K +++ V +P TY +++ C D
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRG----------CQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+N+M + N + ++ +ID+ + + AL + M G+ P+V+ Y++ I
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
+R A L +M +I PN+VT+ L+ A + G L E ++ +Y +M K
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK---LYDEMIKRSIDP 363
Query: 655 NDTYLKELIEEWC 667
+ LI +C
Sbjct: 364 DIFTYSSLINGFC 376
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 45/251 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIY 279
+ F + F K+ LV A + YD K P+++ ++I+ G C D + +++ ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMF 388
Query: 280 EDLRSQNVTLNIYVFNSLMN-------------------------------------VNA 302
E + S++ N+ +N+L+N A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D V+K M GV ++ +YN LL C G A ++ ++L+ + ++
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF---EYLQ-RSKMEPT 504
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++TY+ +++ A + + + GV P+ I ++++I+ GL E+A LF
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 423 EMLQAGCEPNS 433
+M + G P+S
Sbjct: 565 KMREDGPLPDS 575
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P + + + + K+ SL E+M+ I NL TY L+ R ++
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS---QISLA 139
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LA+ M K GY+ + L L+ +C G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 231/542 (42%), Gaps = 55/542 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLN 290
K D+ L ++ K P+++I +ID G+C G M + +++++ ++ + +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ A + + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L G + D FT+S + ++ + + AL V E + +GV N T S L+NA
Sbjct: 309 EMKDL---GFVP-DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ 465
G +E+A + + G PN N ++ A +
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 466 VA----------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
+A LGE + ++ M+ K T N + + FDK F
Sbjct: 425 LAYNCLIRRFCELGE-MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SP + +LID C G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + K M + G+ ++V Y T I + +L +A L E+ ++P++ TY
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVT 682
+L+ S YG VQ+C+A+Y++M ++G K LI + I+ + GE++
Sbjct: 604 SLI---SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Query: 683 LCRRTNSQRPQSLLLEKV----AVHLQKSAAENLAIDL----RGLTKVEARIIVLAVLRM 734
L +P L+ V AVH A NL + GL K ++L L++
Sbjct: 661 L-------KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 735 MK 736
K
Sbjct: 714 GK 715
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 24/407 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y+ + N Y C +++ G K+ I ++ + N ++N+++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ DL + M+K G+ D +YN L++ C G A++ EV ++ K
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNKMKLK 453
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV V TY+ ++ + + + ++M G PN +++ +LIN + +
Sbjct: 454 GV-SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + +M G P + N+L+ C + + AFR + ++ L Y+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL-VTYNTLI 571
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKA 534
D +S M K ++ + + R KP TYN L+ + R A
Sbjct: 572 DGLS-MTGK----LSEAEDLLLEIS------RKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM+ G+ P ++ +LI C EG ++ E + PD++ Y +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++AF+L ++M I + TY +L+ + + G L EV+ +
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 21/372 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 210
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ K A ++ ++ML+ + P+ IT+++LI+ AG E++
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ +A + A + + LG D T I
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK------DLGFVPDAFTFSI 324
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
D S + ++ D K T +IL+ A C + KA ++
Sbjct: 325 LF----DGYSSNEKAEAALGVYETAVDS--GVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
GL PN + + +ID G++ GA ++ M + GM PD +AY I+
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
++ A +MK + P++ TY L+ YG +E +C + ++M G N
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 658 YLKELIEEWCEG 669
LI C+G
Sbjct: 496 SYGTLINCLCKG 507
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 49/348 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+G+K + + + + PN+ T+I+ ++++ + D+ + V+
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + ++ K M K G+ ++ +YN L+ + G A+++
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ KG LK DVFTY++++ + A Q + + E+M +G+ P T+ LI+ C
Sbjct: 589 EISR---KG-LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-----FRSWTLSK 463
G +E LF EM +P+ N +L ++AF L +S L K
Sbjct: 645 TKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 464 T---QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T + LG+ G + +S+ + N +P TYNI
Sbjct: 701 TTYNSLILGQLKVGKLCEV--------RSLIDEMN------------AREMEPEADTYNI 740
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
++K C DY EM+ G L+D C G+ V G
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGF---------LLDVCIGNELVSG 779
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 173/386 (44%), Gaps = 59/386 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
++ + +N+ ++ ++ +++ D F L ++ M+ G+ AD+ +Y+ L+ C
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + ++ DV T+S ++ VF A ++ +M++ G+
Sbjct: 292 NDGKWDDGAKM---LREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+TIT++SLI+ + +A +F+ M+ GCEP+ +IL+ + +A + D RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
FR ++ +PN T
Sbjct: 408 FRE--------------------------------ISSKGLIPN---------------T 420
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C K L EM + G+ P+ +++ IL+D +G + AL+I +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ M+ + Y I + ++ A+SLF + ++P++VTY ++ + GS
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 634 LHEVQQCLAVYQDMWKAGYKAND-TY 658
L E +++ M + G +D TY
Sbjct: 541 LSEADM---LFRKMKEDGCTPDDFTY 563
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
+ G+C D + + ++ +N+ ++ F++L++V + K E+Y M G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +YN L+ C A +++ + +KG + D+ TYS ++ + AK
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMF---DLMVSKGC-EPDIVTYSILINSYCKAKRVD 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+++ ++ S G+ PNTIT+++L+ +G + A LF+EM+ G P+ ILL
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F S+ + +G Y+ + N D S
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDAW----------S 511
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA- 557
+ S + KP TYN+++ C +A L +M+ G +P+ ++ ILI A
Sbjct: 512 LFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
GGSG + ++++++ M+ G S D I + + +RL ++F
Sbjct: 571 LGGSGLIS-SVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLDKSF 614
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 167/414 (40%), Gaps = 45/414 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
V G C M+ I D+ + + +N Y L F V KLG D
Sbjct: 89 VLGFCKG-MELNGIEHDMYTMTIMINCYC-------RKKKLLFAFSVLGRAWKLGYEPDT 140
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+++ L+ CL G A + + ++ + D+ T ST++ AL
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP----DLVTVSTLINGLCLKGRVSEALV 196
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + M+ G P+ +T+ ++N +G A+ LF +M + + + +I++ +
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 445 EACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ FD A LF + + + G DG D + M ++ I N
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML---REMIGR--NI 311
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
+P+ T++ L+ + K L NEM T G++P+ I++ L
Sbjct: 312 IPD---------------VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + A Q+ +M G PD+V Y+ I ++KR+ LF E+ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
PN +TY TL+ + G L+ ++ ++Q+M G + L++ C+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKE---LFQEMVSRGVPPSVVTYGILLDGLCD 467
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 147/385 (38%), Gaps = 60/385 (15%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N ++++ +D ++++++M + + +N + C T + G K +E
Sbjct: 44 NGIVDIKVND---AIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGME 97
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G+ + D++T + ++ + K A V G P+TIT+S+L+N G V
Sbjct: 98 LNGI-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRV 156
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+A+ L + M++ P+ + L+ + A L
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI------------------ 198
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
DR+ + F+P TY ++ C A
Sbjct: 199 --DRMV---------------------------EYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L +M + + + ++I+ID+ G+ + AL + M G+ DVV Y++ I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ + EM I P++VT+ L+ + G L E ++ +Y +M G
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE---LYNEMITRGI 346
Query: 653 KANDTYLKELIEEWC-EGVIQDKNQ 676
+ LI+ +C E + + NQ
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQ 371
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 11/246 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YM 273
I+P + F + F K+ L+ A Y+ +P+ ++ID G C +
Sbjct: 311 IIPDV-VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID--GFCKENCLH 367
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++ + S+ +I ++ L+N A + + +++ + G++ + +YN L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G A+E++ E + ++GV V TY ++ D AL++ E M
Sbjct: 428 LGFCQSGKLNAAKELFQE---MVSRGVPP-SVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ +T ++ +I+ NA V+ A LF + G +P+ N+++ +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 452 AFRLFR 457
A LFR
Sbjct: 544 ADMLFR 549
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ V G C G ++ +++++ S+ V ++ + L++ + +L L
Sbjct: 418 PNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ MQK + + YNI++ C A A ++ L KGV K DV TY+ +
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC---SLSDKGV-KPDVVTYNVM 531
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAG 428
+ A + M G TP+ T++ LI A +GL+ ++ L EEM G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCG 590
Query: 429 CEPNSQCCNILLQACVEACQFDRAF 453
+S +++ + + D++F
Sbjct: 591 FSADSSTIKMVIDMLSDR-RLDKSF 614
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C AI + +RS V ++ ++ LM+ + + +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y LL+ G V E++G + + G+ D + +S ++ +A A
Sbjct: 335 EITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYAKQGKVDQA 390
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+++RA L + + L + + I + K+ + I + F
Sbjct: 451 LCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF------ 499
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 -ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 621 YITLLRA 627
Y +L
Sbjct: 619 YNIILHG 625
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 179/461 (38%), Gaps = 73/461 (15%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ + +M G N + +I+ C+
Sbjct: 451 LCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSHCK 488
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 169/438 (38%), Gaps = 104/438 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + ++ SYNILLK C + +QE E+ H+ A G DV +Y+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLC---DENRSQEAL-ELLHMMADDRGGGSPPDVVSYT 200
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T++S+I A A +++AM + M++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-----VALGEDYDGNTDRISNM 482
G P+ N +L + Q A + + +L DY R M
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC--M 318
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--------------- 527
E + + S KR KP TTY L++ T
Sbjct: 319 EAR--------------KIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 528 ------DYYRVKALM----------------NEMRTVGLSPNHISWTILIDACGGSGNVE 565
D+Y L+ ++MR GL+PN +++ +I SG VE
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 566 GALQILKIMREDGMSPDVVAYTTAIK----------------------VCV--------- 594
A+ + M ++G+SP + Y + I +C+
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 595 ----RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ R+ ++ LFE M ++PN++TY TL+ G + E + L+ M
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS---GMVSV 540
Query: 651 GYKANDTYLKELIEEWCE 668
G K N LI +C+
Sbjct: 541 GLKPNTVTYSTLINGYCK 558
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 183/415 (44%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 74/357 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK---- 512
L H T N + N S +F + S K
Sbjct: 642 MGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 513 -----PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 680 MKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 666 WCE 668
C+
Sbjct: 521 LCQ 523
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
T++ R+ H + + + DM K G K N LI C
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 45/176 (25%)
Query: 511 FKPTTTTYNILMKACCTDYY----RVKALMNEMRTVGLSPNHI----------------- 549
F P T +I++ + ++ AL++ + G+SPN +
Sbjct: 218 FPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 550 SWTILID-----------------AC-GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+W IL D +C G + ++ ++ M E + PDVV I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 592 VCVRSKRLKQAFSLFEEMKHYQ------IQPNLVTYITLLRARSRYGSLHEVQQCL 641
+S+R+ +A +FE+M+ + I+ + + + TL+ + G L E ++ L
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 180/451 (39%), Gaps = 58/451 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI---CGYCSLRRL 652
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ +++ + + N L LI C+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 208/472 (44%), Gaps = 38/472 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F + + + K DL +A Y SPN+ + TI+ + G+C G ++ +Y
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYTIL-IKGLCQDGRIYEAFGMY 414
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + +I ++SL++ +L+ +Y++M K+G D+ Y +L+ L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LS 472
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ + VK L ++L+V +++++ + + ALKV M G+ P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++++ G +E+A+ LF M + G EP++ L+ A + + +LF
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 458 SWTLSKTQVALG------------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-- 503
+K + + + +N+ + T N + + S
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 504 ---------SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
K F P T T IL+ C D + + M G PN +++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D S ++EG+ ++ + M+E G+SP +V+Y+ I + R+ +A ++F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
++ P++V Y L+R + G L E +Y+ M + G K +D + L E
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNGVKPDDLLQRALSE 819
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ L+ C + R L M G+ P+ I+++ LID +G + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ DVV +++ I V V+S L A +++ M I PN+VTY L++ +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
G ++E +Y + K G + + LI+ +C+
Sbjct: 404 DGRIYEA---FGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G L VY+ M G N LI+ C+
Sbjct: 367 VKSGDLATAS---VVYKRMLCQGISPNVVTYTILIKGLCQ 403
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 195 FRIVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREF--GKKRDLVSALRAYDASKK 249
FR++ + KPDV +R + + R + F R F G + D ++ DA K
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL 309
H+ I + D+ M+ I D+ NV +++ H ++
Sbjct: 579 HMKPT---IGLQLFDL-------MQRNKISADIAVCNVVIHLLF-------KCHRIEDAS 621
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + N+ + + D+ +YN ++ C A+ I+ E+ + G + T + +
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGP---NTVTLTIL 677
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A+++ M G PN +T+ L++ + + +E + LFEEM + G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+ +I++ + + D A +F
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIF 764
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYD-GNTDRI----SNMEHKDKQSITNT 493
+ A R+ S L + +G D NT+++ ++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 74/358 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 356 ------------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+G LD+ Y+ ++ +F D + ++ DM G P+
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK--- 512
L H T N + N S +F + S K
Sbjct: 641 DMGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 513 ------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 679 KMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG + LI
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 665 EWCE 668
C+
Sbjct: 520 GLCQ 523
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ +P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
T++ R+ H + + + DM K G K N LI C
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 45/176 (25%)
Query: 511 FKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHI----------------- 549
F P T +I++ K ++ AL++ + G+SPN +
Sbjct: 218 FPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANA 277
Query: 550 SWTILID-----------------AC-GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+W IL D +C G + ++ ++ M E + PDVV I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 592 VCVRSKRLKQAFSLFEEMKHYQ------IQPNLVTYITLLRARSRYGSLHEVQQCL 641
+S+R+ +A +FE+M+ + I+ + + + TL+ + G L E ++ L
Sbjct: 338 TLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 203/476 (42%), Gaps = 38/476 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 457 -RSWTLSKTQVALGEDYDG-----NTDRISNMEHKDKQS------ITNTPNFVPNSHYSS 504
+ L+ ++V+ G DG D + K++ IT T
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 505 FDK---------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
D+ + P TY+ L+ C + K ++ + VGLSPN I ++
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI C G ++ A++I + M +G + D + + ++ ++ +A M
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
I PN V++ L+ YG+ E + +V+ +M K G+ L++ C+G
Sbjct: 539 ILPNTVSFDCLING---YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 167/433 (38%), Gaps = 28/433 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N K E+ + ++G+
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G A IY E LE D FT++ +V A A
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIY-EAMILEGH---TRDHFTFNVLVTSLCKAGKVAEA 527
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PNT+++ LIN N+G +A +F+EM + G P LL+
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SH 501
+ A + +S V D + M + ++ + N S
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAV----------DTV--MYNTLLTAMCKSGNLAKAVSL 635
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISWTILIDAC 558
+ +R S P + TY L+ C V A++ E G + PN + +T +D
Sbjct: 636 FGEMVQR-SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G + + + M G +PD+V I R ++++ L EM + PNL
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQ 678
TY LL Y +V +Y+ + G + L+ CE + +
Sbjct: 755 TTYNILLHG---YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 679 GEVTLCRRTNSQR 691
+ +CR R
Sbjct: 812 LKAFICRGVEVDR 824
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/353 (17%), Positives = 146/353 (41%), Gaps = 21/353 (5%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N+L+ C + + AF L + ++ ++L +D + N H+ ++S
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
+ P + Y L+ C D + EM + P +++
Sbjct: 882 LHEM----------SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ A G + A +L+ M + + P + ++TT + +C ++ + +A L M
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
+ ++ +LV+Y L+ G ++ +Y++M G+ AN T K LI
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKG---DMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM R +P+ + ILI G ++ +L+I ++M G +P V +
Sbjct: 111 ALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
V+S +S +EM +I P++ T+ L+ GS + + Q M K+GY
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEKSGYA 225
Query: 654 ANDTYLKELIEEWCE 668
++ +C+
Sbjct: 226 PTIVTYNTVLHWYCK 240
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMA 325
CG ++ + + + I F +LM++ N + ++ LE+ M G+ D+
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE-ALELRVVMSNCGLKLDLV 1000
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALK 384
SYN+L+ C G+ LA E+Y E+K G L + TY +++ + A + A
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMK---GDGFLA-NATTYKALIRGLLARETAFSGADI 1056
Query: 385 VKEDMLSAG 393
+ +D+L+ G
Sbjct: 1057 ILKDLLARG 1065
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 194/486 (39%), Gaps = 99/486 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 179
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V N L++ N T
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ V++LE KG +
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGC-E 295
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 398
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 399 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +AF L +M+ + P++VTY +L + H ++ + V + M G + N+T
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 659 LKELIE 664
LIE
Sbjct: 546 YTVLIE 551
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 162/405 (40%), Gaps = 60/405 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L +
Sbjct: 278 MVDRAFEMVRNLELKGCE------------------------------------------ 295
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 296 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE-WCEG 669
+ G + Q L ++ + + G N + + W G
Sbjct: 411 ATLCKNG---KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 31/351 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL+ D P+M+ TII G+C + M RA + +L + ++ +N L
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIR--GMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + K+ E K M K+ ++ +Y+IL+ C G +E +K ++
Sbjct: 305 LRALLNQGKWE-EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI---EEAMNLLKLMK 360
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG L D ++Y ++ F +A++ E M+S G P+ + +++++ G
Sbjct: 361 EKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA+ +F ++ + GC PNS N + A + RA + ++ G D D
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM------MSNGIDPD- 472
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYRVK 533
+ + S V + D R F P+ TYNI++ C +R++
Sbjct: 473 ------EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK-AHRIE 525
Query: 534 ALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILK-IMREDGMS 580
+N + ++ G PN ++T+LI+ G +G A+++ ++R D +S
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 28/285 (9%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-TLSKTQ 465
+C + +E ++HL E M++ G P+ C L++ +A R+ +
Sbjct: 99 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 466 V----ALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
V AL + D T + M KD T T N + S S + K
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 513 --------PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TY IL++A + +AL M+EM + GL P+ ++ +I G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ A ++++ + G PDV++Y ++ + + ++ L +M + PN+VTY
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
L+ R G + E L + M + G + LI +C
Sbjct: 338 ILITTLCRDGKIEEAMNLLKL---MKEKGLTPDAYSYDPLIAAFC 379
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 178/384 (46%), Gaps = 35/384 (9%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 640 CLAVYQDMWKAGYKANDTYLKELI 663
L + M + G ND LI
Sbjct: 530 LL---RKMEEDGNAPNDCTYNTLI 550
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 56/353 (15%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+++TY LL G L ++ L +++D+ K+ +IE C+G
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 159/366 (43%), Gaps = 60/366 (16%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKEL 662
++ + M + P++VT+ +L++ Y + V + V++++ K G AN L
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 663 IEEWCE 668
++ +C+
Sbjct: 410 VQGFCQ 415
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 153/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + K E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 168/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI---------------------NAC 408
+ VF Q A ++ ++M++ G++PN IT+++L+ N C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 409 AN--------------AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
YS K + ++P TTT+N L+K + +A L++ M G P+ +++ +++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG+ AL +L+ M E + DV Y+T I R + A SLF+EM+ I+ +
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
+VTY +L+R + G ++ L +DM N L++ + EG +Q+ N+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 24/377 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
I V G+C GD + ++ + + + + ++N++++ N ++ L ++ M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L++ C G A + ++ +E K + +V T+S ++ F
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSALIDAFVKEGK 341
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C PN N
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFV 497
L++ +A + D LFR +S+ + GNT + + H Q+ + V
Sbjct: 402 LIKGFCKAKRVDEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARECDNAQIV 453
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILI 555
S P TY+IL+ C + AL+ ++ + P+ ++ I+I
Sbjct: 454 FKQMVSD-----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G VE + + G+ P+VV YTT + R ++A +LF EMK
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 616 PNLVTYITLLRARSRYG 632
P+ TY TL+RA R G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 35/408 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 64 DAVNLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+IL+ C LA + ++ L + D+ T ++++ F
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLNSLLNGFCHGNRISD 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + M+ G P++ T+++LI+ +A+ L + M+ GC+P+ I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + N +++ + N
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGV-VIYNTIIDALCNY-----KNVNDALNL----- 278
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TYN L++ C +Y R L+++M ++PN ++++ LIDA
Sbjct: 279 FTEMDNK-GIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
VTY TL++ + V + + ++++M + G N LI +
Sbjct: 397 VTYNTLIKG---FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 155/365 (42%), Gaps = 35/365 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y I++ C G+ LA + +K +E +G ++ V Y+TI+ + K
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSL---LKKME-QGKIEPGVVIYNTIIDALCNYKN 271
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M + G+ PN +T++SLI N G A L +M++ PN +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + + S+ N F
Sbjct: 332 LIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN--GFCM 373
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHI 549
+ F P TYN L+K C RV L EM GL N +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTV 432
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LI + + A + K M DG+ PD++ Y+ + + +++ A +FE +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ +++P++ TY ++ + G +V+ ++ + G K N ++ +C
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 670 VIQDK 674
++++
Sbjct: 550 GLKEE 554
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 52/308 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS ++ F +AL V M+ G P+ +T +SL+N + + A+ L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M++ G +P+S N L+ LFR S+ VAL +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHG------------LFRHNRASEA-VAL----------VDR 211
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
M K Q P TY I++ C D +L+ +M
Sbjct: 212 MVVKGCQ------------------------PDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ P + + +IDA NV AL + M G+ P+VV Y + I+ R
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
A L +M +I PN+VT+ L+ A + G L E ++ +Y +M K +
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK---LYDEMIKRSIDPDIFTY 364
Query: 660 KELIEEWC 667
LI +C
Sbjct: 365 SSLINGFC 372
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 61/330 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 379
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYT 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV P+ +T+S L++ N G VE A+ +FE + ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 530
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP TY +M C + AL EM+ G
Sbjct: 531 ----------------------GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMR 575
P+ ++ LI A G+ + ++++ MR
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 143/364 (39%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK +++ +M G+ NT+T+++LI+ A + A +F++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + A +F SK +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME----------------------- 498
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 499 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T ++ G E A + + M+E+G PD Y T I+ +R + L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 607 EEMK 610
EM+
Sbjct: 595 REMR 598
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P +V ++ + + + SL E+M++ I NL TY L+ R L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL---SLA 135
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LAV M K GY+ + L L+ +C G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +FN+L++ V L V +M G++ D+ +YN L+ G LA E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++++ KG K +V++Y+ +V F A V +M + G+ PNT+ ++ LI+A
Sbjct: 413 HDMRN---KGC-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ +A+ +F EM + GC+P+ N L+ E + A L R +S+ VA
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD-MISEGVVA 527
Query: 468 LGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ + + E K+ + + N F S D+ TYN L+K C
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVF----QGSPLDE--------ITYNSLIKGLC 575
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + ++L +M G +P++IS ILI+ SG VE A++ K M G +PD+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + I R+ R++ ++F +++ I P+ VT+ TL+ + G +++
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 35/331 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K F AL + DM G PN++ + +LI++ + V +A+ L E
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N ++ + C+FDR R F ++ + G
Sbjct: 277 EMFLMGCVPDAETFNDVI---LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 472 YDGNTDRISNMEH---KDKQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G D ++ + K + I NT FV +H D + T+Y I+ C
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV--THGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 527 TD-----YYR------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ Y++ ++++MR G PN S+TIL+D G ++ A +L M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
DG+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVD 508
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E++ L + +DM G AN LI +
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 55/354 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ D+R++ N+Y + L++ + V M G+ + +N L+ A C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A EI+ E+ KG K DV+T+++++ + + AL + DM+S GV
Sbjct: 471 KEHRIPEAVEIFREMPR---KGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
NT+T+++LINA G +++A L EM+ G + N L++ A + D+A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F DG+ P+
Sbjct: 587 FEKML-----------RDGHA------------------------------------PSN 599
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ NIL+ C +A EM G +P+ +++ LI+ +G +E L + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ +G+ PD V + T + + + A L +E PN T+ LL++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 163/429 (37%), Gaps = 46/429 (10%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L I L++ N H K V+ +M + + ++ +++KA C
Sbjct: 182 FKSYNVVLEI-----LVSGNCH--KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ E+M G P+ T+
Sbjct: 235 SALSL---LRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +I + +A + ML G P+ L+ + + D A LF + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRI 348
Query: 462 SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRF----- 509
K ++ + G G D + S P+ NS + K
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 510 ----------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
KP +Y IL+ C + Y V +NEM GL PN + + L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV---LNEMSADGLKPNTVGFNCL 465
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A + A++I + M G PDV + + I +K A L +M +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDK 674
N VTY TL+ A R G + E ++ + +M G ++ LI+ C DK
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARK---LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 675 NQNQGEVTL 683
++ E L
Sbjct: 583 ARSLFEKML 591
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 519
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G D +YN L+K C AG
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ + DR
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 535 LMNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LM EMR V P S+ ++++ + A + M + P + + +K
Sbjct: 168 LMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ A SL +M + PN V Y TL+ + S+ ++E Q L ++M+ G
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL---EEMFLMGCV 284
Query: 654 ANDTYLKELIEEWCE 668
+ ++I C+
Sbjct: 285 PDAETFNDVILGLCK 299
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +I + + ++ + ++ A ++ + +P+ C +I+ G+C M A
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN--GLCRSGMVEEA 618
Query: 278 I--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +++ + T +I FNSL+N A ++ L +++ +Q G+ D ++N L+
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 334 CCLAG 338
C G
Sbjct: 679 LCKGG 683
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 195/467 (41%), Gaps = 47/467 (10%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F ++ L AL K PN+ ++++ G C S
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN--GYCHSKRISE 169
Query: 277 AI-------YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ + VT N + ++ A + + + M G D+ +Y +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGV 226
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G+T LA + +++ +G L+ V Y+TI+ K AL + ++M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN +T+SSLI+ N G A L +M++ P+ + L+ A V+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L YD R + S+ N F + + F
Sbjct: 343 VEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMF 384
Query: 510 SFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGG 560
F P TYN L+K C Y RV+ M EM GL N +++ ILI
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
Y ++ + G +V+ ++ ++ G K + +I +C
Sbjct: 504 YNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 254 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 367
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 461
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 462 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 184/433 (42%), Gaps = 46/433 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPF----------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D AF L K + + Y+ D + +H K+ ++
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGV-LIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T++ L+ A + V+A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + P+ ++++ LI+ ++ A Q+ + M PDVV Y T IK +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
KR+++ +F EM + N VTY L++ + G Q+ ++++M G N
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPN 465
Query: 656 DTYLKELIEEWCE 668
L++ C+
Sbjct: 466 IMTYNTLLDGLCK 478
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 35/436 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 373
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 492
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 493 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
+ + + +Q N + ++ + ++V+ +++ M + G + T L+
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKGLVPDRTAYTSLM-- 655
Query: 666 WCEGVIQDKNQNQGEV 681
D N QG V
Sbjct: 656 -------DGNFKQGNV 664
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 181/417 (43%), Gaps = 34/417 (8%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNV 287
+FGK L L Y K + PN+ T++D C + M +AI Y D+R +
Sbjct: 344 KFGK---LPIGLEFYREMKGNGLKPNVVSYSTLVD--AFCKEGMMQQAIKFYVDMRRVGL 398
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N Y + SL++ N +L + M ++GV ++ +Y L+ C A A+E
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++G+ ++ GV+ ++ +Y+ ++ F AK AL++ ++ G+ P+ + + + I
Sbjct: 459 LFGK---MDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
+ +E A + EM + G + NS L+ A ++ L + +
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
T V DG ++K + N + N F + + ++
Sbjct: 575 VTVVTFCVLIDGLC------KNKLVSKAVDYFNRISND--------FGLQANAAIFTAMI 620
Query: 523 KACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
C D +V+A L +M GL P+ ++T L+D GNV AL + M E GM
Sbjct: 621 DGLCKD-NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D++AYT+ + +L++A S EEM I P+ V I++L+ G + E
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 182/437 (41%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 394 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT-VGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ N + GL N +T +ID V
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A + + M + G+ PD AYT+ + + + +A +L ++M ++ +L+ Y +L
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 625 LRARSRYGSLHEVQQCL 641
+ S L + + L
Sbjct: 690 VWGLSHCNQLQKARSFL 706
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 52/276 (18%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F K + G +PT
Sbjct: 249 FF------KDMIGAGA-----------------------------------------RPT 261
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 633 SLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ QQ + Y DM + G N+ LI+ C+
Sbjct: 382 MM---QQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 507 KRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KRF P T + N L+ K TD VK +M G P ++ I+ID G
Sbjct: 219 KRFRVFPKTRSCNGLLHRFAKLGKTD--DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+VE A + + M+ G+ PD V Y + I + RL FEEMK +P+++TY
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQ 672
L+ ++G L L Y++M G K N L++ +C EG++Q
Sbjct: 337 ALINCFCKFGKL---PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 56/377 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 243 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 355
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 356 VGDAF--------------------------------------------TYNTLIHGYCQ 371
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ-CLAVY 644
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E + C +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 645 QDMWKAGYKANDTYLKE 661
+D + + D L++
Sbjct: 492 EDGFMPSERIYDETLRD 508
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 45/423 (10%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 142 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 198 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 257 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
+++ R L E CL ++ + + G K + +I C +Q + L
Sbjct: 435 IIQGLCRTDKLKEA-WCL--FRSLTRKGVKPDAIAYITMISGLCRKGLQREADK-----L 486
Query: 684 CRR 686
CRR
Sbjct: 487 CRR 489
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 139 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 192 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 248
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 249 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 308 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 360
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 171/412 (41%), Gaps = 56/412 (13%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ G+ + A R ++ + +Y +I G G + ++ +++ ++ +
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 288 TLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ +N++++ + K + + MQ+ GV D ++N LL C G A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E+ + ++ DVF+Y+T++ +A ++ M + PN +++S++
Sbjct: 360 NLFDEMTNRR----IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A AG ++A++LF EM G + N LL + + + A + R
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE------ 469
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
++G K TYN L+
Sbjct: 470 MASVG-----------------------------------------IKKDVVTYNALLGG 488
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
Y VK + EM+ + PN ++++ LID G + A++I + + G+ D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
VV Y+ I ++ + A SL +EM I PN+VTY +++ A R ++
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 179/449 (39%), Gaps = 91/449 (20%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC----- 313
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
KG ++ + + K F ++M GV P+ I
Sbjct: 314 ---------------GKGGME-----FKQVAKFF-------------DEMQRNGVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + PN V S T +
Sbjct: 401 PVKRIM----------------------------PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR +G++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ ++++ AG +A+ LI+ C+
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A+ +++ K++ PN+ +ID CG G ++ + ++++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + K ++ +V +YST++ FA A + AL + +M G+ + ++
Sbjct: 391 DLAFEI---LAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF---- 502
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T++ KR P TY+
Sbjct: 503 ---TEM----------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS + ++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 53/310 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S ++ + + + A+ V M G+ PN +T++++I+AC G+ +Q F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM + G +P+ N LL C ++ A LF D ++N
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF--------------------DEMTN 367
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ +Q + FS YN L+ A C A ++ +M
Sbjct: 368 --RRIEQDV------------------FS-------YNTLLDAICKGGQMDLAFEILAQM 400
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ PN +S++ +ID +G + AL + MR G++ D V+Y T + + + R
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
++A + EM I+ ++VTY LL + G EV++ V+ +M + N
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK---VFTEMKREHVLPNLLTY 517
Query: 660 KELIEEWCEG 669
LI+ + +G
Sbjct: 518 STLIDGYSKG 527
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 29/306 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+ID G + ++ ++ ++R + L+ +N+L+++ + L++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M +G+ D+ +YN LL G ++++ E+K + VL ++ TYST++
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR---EHVLP-NLLTYSTLID 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+++ + SAG+ + + +S+LI+A GLV A+ L +EM + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGN---------TDRIS 480
N N ++ A + DR+ +L + AL + +GN T +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 481 NMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
N KD Q ++ H + KP T++ ++ AC C +
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMH------QLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 535 LMNEMR 540
L+ E+R
Sbjct: 697 LLEELR 702
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G V A +I + G V A++ I RS ++A S+F MK
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVI 671
Y ++PNLVTY ++ A + G E +Q + +M + G + + L+ G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 672 QDKNQN 677
+ +N
Sbjct: 355 WEAARN 360
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 37/368 (10%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ Y+ ++ + C + A ++ E
Sbjct: 211 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--- 265
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ KG+ + DVFTYS+++ + W A ++ DML + PN +T++SLI+A A G
Sbjct: 266 MDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A LF+EM+Q +PN N L+ C DR + +TL ++ L +
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 473 DGNT---------------DRISNMEHKDKQSITNTPNFVPNSHYSSFD---KRFSFK-- 512
NT + +M + T T + + + + D + FK
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 513 ------PTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C + KA++ ++ + P+ ++ I+ + +G V
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E + + G+ PDV+AY T I + ++A++LF +MK P+ TY TL
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 625 LRARSRYG 632
+RA R G
Sbjct: 562 IRAHLRDG 569
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 186/439 (42%), Gaps = 36/439 (8%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD ++ LS N + + + + G+ +KSR +I F+ L++ A
Sbjct: 28 SYDGYREKLSR-NALLHLKLDEAVDLFGEMVKSRPFP----------SIVEFSKLLSAIA 76
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + M+ LGV ++ +YNI++ C A I G++ L
Sbjct: 77 KMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--- 133
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ T ++++ F A+ + + M+ G P+T+T+++L++ +A+ L
Sbjct: 134 -SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M+ GC+P+ ++ + + D A L K + + Y D +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VIYSTVIDSLC 251
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMN 537
H D + N ++ D + +P TY+ L+ +C +Y R L++
Sbjct: 252 KYRHVD-----DALNL-----FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLS 299
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M ++PN +++ LIDA G + A ++ M + + P++V Y + I
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDT 657
RL +A +F M P++VTY TL+ + +V + +++DM + G N
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLING---FCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 658 YLKELIEEWCEGVIQDKNQ 676
LI + + D Q
Sbjct: 417 TYTTLIHGFFQASDCDNAQ 435
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 159/404 (39%), Gaps = 55/404 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K R + AL + P+++ ++I G + + + D
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FNSL++ A + K +++ M + + ++ +YN L+ C+
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQ+I+ + +K L DV TY+T++ F AK +++ DM G+ NT+
Sbjct: 361 LDEAQQIF---TLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI+ A + A +F++M+ G PN N LL + + ++A +F
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK + P TYN
Sbjct: 477 QKSKME-----------------------------------------------PDIYTYN 489
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+ + C L + G+ P+ I++ +I G E A + M+ED
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G PD Y T I+ +R + L +EM+ + + TY
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 152/325 (46%), Gaps = 24/325 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+ C A V E++ + + +G++ + TY+T++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF---RDMSRRGLVG-NTVTYTTLI 422
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A A V + M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NI+ + +A + + + LF S +L + D IS K
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMISGFCKKG---- 534
Query: 491 TNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ Y+ F K P + TYN L++A D + + L+ EMR+ +
Sbjct: 535 ------LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Query: 547 NHISWTILIDACGGSGNVEGALQIL 571
+ ++ ++ D +G L++L
Sbjct: 589 DASTYGLVTDMLHDGRLDKGFLEVL 613
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 23/344 (6%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ YN ++ C + A +++ +
Sbjct: 221 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK--- 275
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ K DVFTY+ ++ + W A ++ DML + P+ + +++LI+A G
Sbjct: 276 METKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 413 LVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ +A L++EM+++ C P+ N L++ + + + +FR +S+ +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE--MSQRGLV---- 388
Query: 472 YDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
GNT + + H Q+ + V S P TYNIL+ C +
Sbjct: 389 --GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-----GVHPDIMTYNILLDGLCNNGN 441
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL+ M+ + + +++T +I+A +G VE + + G+ P+VV YTT
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 58 DAIGLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+I + C LA I G++ L + T ++++ F
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP----SIVTLNSLLNGFCHGNRISE 163
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++L++ +A+ L E M+ GC+P+ ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L K + + Y+ D + +H D
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADV-VIYNTIIDGLCKYKHMDDA------------- 269
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID 556
+ F+K + KP TYN L+ +C +Y R L+++M ++P+ + + LID
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 557 ACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A ++ ++++ PDVVAY T IK + KR+++ +F EM +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 616 PNLVTYITLLRA 627
N VTY TL+
Sbjct: 389 GNTVTYTTLIHG 400
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 57/352 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ C G LA + +++ KG ++ DV Y+TI+ K
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME----KGKIEADVVIYNTIIDGLCKYKH 265
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M + G+ P+ T++ LI+ N G A L +ML+ P+ N
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L+ SK
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCF-------------------------------- 353
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
P YN L+K C Y RV+ M EM GL N +++T LI
Sbjct: 354 --------------PDVVAYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ + + A + K M DG+ PD++ Y + + ++ A +FE M+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
++VTY T++ A + G +V+ ++ + G K N ++ +C
Sbjct: 459 LDIVTYTTMIEALCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK--- 274
D++F N + F K+ LV A + YD KH P++ T+I G C Y +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-CFPDVVAYNTLIK--GFC-KYKRVEE 374
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ ++ + + N + +L++ A D V+K M GV D+ +YNILL
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++ ++ + +KLD+ TY+T+++ A + + +
Sbjct: 435 GLCNNGNVETALVVFEYMQKRD----MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
GV PN +T++++++ GL E+A LF EM + G PNS N L++A
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL + +K ++ I TIID G+C A ++ + ++ + +++ +N L
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIID--GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ N + +M + + D+ +N L+ A G V A+++Y E+ +++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM--VKS 349
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K DV Y+T++K F K + ++V +M G+ NT+T+++LI+ A +
Sbjct: 350 KHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A +F++M+ G P+ NILL + A +F + K + L D
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE--YMQKRDMKL--DIVTY 464
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VK 533
T I + K + + + + S + KP TY +M C +
Sbjct: 465 TTMIEALCKAGK--VEDGWDL-----FCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL EM+ G PN ++ LI A G+ + +++K MR G + D + +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM- 575
Query: 594 VRSKRLKQAF 603
+ RL ++F
Sbjct: 576 LHDGRLDKSF 585
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 114/310 (36%), Gaps = 53/310 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS + F +AL + M+ G P+ +T +SL+N + + +A+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M++ G +P++ L+ + + A L + Q
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------------- 212
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
P TY ++ C AL +N+M
Sbjct: 213 -------------------------------PDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + + +ID +++ A + M G+ PDV Y I R
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY- 658
A L +M I P+LV + L+ A + G L E ++ +Y +M K+ + D
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK---LYDEMVKSKHCFPDVVA 358
Query: 659 LKELIEEWCE 668
LI+ +C+
Sbjct: 359 YNTLIKGFCK 368
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ L+ A + V +L +M+ +G+S N +++I I+ + AL I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + R+ +A +L ++M QP+ VT+ TL+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 631 YGSLHE 636
+ E
Sbjct: 193 HNKASE 198
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P +V ++ + + + SL E+M++ I NL TY + R L
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQL---SLA 129
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LA+ M K GY + L L+ +C G
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 81/435 (18%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ +N + + L+ + + D +VY +++ G D+ +YN+LL A LA +
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA--LAKD 251
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Q ++ ++K K + D +TY+ +++ A+ + +M++ G+T N +
Sbjct: 252 EKACQ-VFEDMK----KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR-------- 451
+++L+ A +V++A+ +F M++ GC PN ++LL V Q R
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 452 ------------------------AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISN 481
A RLF W+ + +++ E G I
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 482 MEH----KDKQSITNTPNFVPNSHYSSFD---------------KRFSFKPTTTTYNILM 522
+E +K +T+T + N+ +S+ K+ P TYNIL+
Sbjct: 427 IEMLSKIHEKGVVTDTMMY--NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 523 KACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + RV + E+ P+ IS+ LI+ G +G+V+ A K M+E
Sbjct: 485 AS----FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++PDVV Y+T ++ +++R++ A+SLFEEM QPN+VTY LL + G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y M + G
Sbjct: 601 A---VDLYSKMKQQG 612
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 189/438 (43%), Gaps = 50/438 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG DL LR KK N + + ++ DY K+ +Y ++R L+
Sbjct: 181 FGNTEDLQMCLRLV---KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD 237
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+ +N L++ A D K +V+++M+K D +Y I+++ G E G
Sbjct: 238 IFAYNMLLDALAKDEK-ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK---CDEAVGLF 293
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +G L L+V Y+T+++V A K A++V M+ G PN T+S L+N
Sbjct: 294 NEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 411 AG---LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-RSWTLS---- 462
G ++ + + + + G + L++ + A RLF W+
Sbjct: 353 EGQLVRLDGVVEISKRYMTQGIY------SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 463 -KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ +++ E G I +E +K +T+T + N+ +S+ K
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY--NTVFSALGK---------- 454
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ L +M+ G SP+ ++ ILI + G G V+ A+ I + +
Sbjct: 455 --------LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PD+++Y + I ++ + +A F+EM+ + P++VTY TL+ +G V
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC---FGKTERV 563
Query: 638 QQCLAVYQDMWKAGYKAN 655
+ +++++M G + N
Sbjct: 564 EMAYSLFEEMLVKGCQPN 581
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 160/424 (37%), Gaps = 83/424 (19%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ KK + Y +I G G ++ ++ ++ ++ +TLN+ +N+LM
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V A + ++V+ M + G + +Y++LL G V + K +G
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG 373
Query: 358 VLKLDVFTYSTIVKV------FADAKWWQMALKVKED--------------------MLS 391
+ V T S + V F D W +K + D MLS
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCD--MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 392 ----AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
GV +T+ ++++ +A + LFE+M + G P+ NIL+ +
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A +F +
Sbjct: 492 EVDEAINIFEEL-----------------------------------------------E 504
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP +YN L+ D EM+ GL+P+ ++++ L++ G + VE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + + M G P++V Y + ++ R +A L+ +MK + P+ +TY L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 626 RARS 629
R +S
Sbjct: 625 RLQS 628
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 161/410 (39%), Gaps = 68/410 (16%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M K V ++++ NIL+ GNT Q VK + LK++ FTY ++
Sbjct: 158 ILDSMVKSNVHGNISTVNILIG---FFGNTEDLQMCLRLVKKWD----LKMNSFTYKCLL 210
Query: 371 KVFADAKWWQMAL--------------------------------KVKEDMLSAGVTPNT 398
+ + ++ + A +V EDM +
Sbjct: 211 QAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDE 270
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
T++ +I G ++A+ LF EM+ G N N L+Q + D+A ++F
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 457 --------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-----------NTPNFV 497
+T S L +G R+ + K+ +T + V
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVA--EGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHV 388
Query: 498 PNSHYSSFDK-RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
+H D F K +Y ++++ C ++A +++++ G+ + + + +
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
A G + + + M++DG SPD+ Y I R + +A ++FEE++
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+P++++Y +L+ + G + E +++M + G + L+E
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAH---VRFKEMQEKGLNPDVVTYSTLME 555
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 352 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 457
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 458 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 480
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 188/426 (44%), Gaps = 60/426 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 298
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 390
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 391 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 430
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
++ +++P++ TY ++ + G +V+ ++ + G K N +I +C
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 669 GVIQDK 674
++++
Sbjct: 548 KGLKEE 553
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 60/419 (14%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I FN L++ A KF L + + MQ L + D+ SYNIL+ C LA +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + D+ T S+++ + K A+ + + M PNT+T+++LI+
Sbjct: 139 GKMMKLGYEP----DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+ GC+P+ ++ + D A L + K +
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ Y D + N +++ + N ++ D + +P TYN L++ C
Sbjct: 255 V-VIYTTIIDALCNY-----KNVNDALNL-----FTEMDNK-GIRPNVVTYNSLIRCLC- 301
Query: 528 DYYR---VKALMNEMRTVGLSPNHISWTILIDACGGSGNV-------------------- 564
+Y R L+++M ++PN ++++ LIDA G +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 565 ---------------EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ A + ++M P+VV Y T IK ++KR+++ LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ N VTY TL++ + G Q+ +++ M G + L++ C+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQK---IFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 146/364 (40%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 498 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 607 EEMK 610
+EM+
Sbjct: 594 KEMR 597
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P +V + + + + SL E M++ +I +L +Y L+ R L
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQL---PLA 134
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LAV M K GY+ + L L+ +C G
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 87/412 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS-EVLR 316
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+++G++ D SYNIL++ C G N
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 377 KIEAAEIL--IREIREKGIV-LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S P TYN
Sbjct: 494 DM-----------------------------------------------MSINPDDVTYN 506
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 197/478 (41%), Gaps = 47/478 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + R + A+ + K+ P C I+ + +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV + LK M+ G+ + +YN L++ L
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 273 RGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVP 325
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 457 RSWTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSF---- 505
R S T L Y + D D+ T P Y+S
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM---TDGIQPTQFTYTSLIYVL 442
Query: 506 ---------DKRF------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
D+ F KP N LM C + R +L+ EM + ++P+
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ L+ G G E A +++ M+ G+ PD ++Y T I + K AF + +E
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 609 MKHYQIQPNLVTYITLLR--ARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
M P L+TY LL+ ++++ G L E + ++M G ND+ +IE
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAE-----ELLREMKSEGIVPNDSSFCSVIE 615
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 159/374 (42%), Gaps = 62/374 (16%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M ++ + +++ ++NI++ C G A+ G +E G+ K + TY+T+V+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG---IMEVFGI-KPTIVTYNTLVQ 268
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ + A + +M S G P+ T++ +++ N G +A + EM + G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVP 325
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S NIL++ C + AF +R + + V
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFA-YRDEMVKQGMV------------------------- 359
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
PT TYN L+ + +++A L+ E+R G+ +
Sbjct: 360 ---------------------PTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDS 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ILI+ G+ + A + M DG+ P YT+ I V R + ++A LFE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC- 667
+ ++P+LV TL+ G++ + ++ ++M +D L+ C
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNM---DRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 668 EGVIQDKNQNQGEV 681
EG ++ + GE+
Sbjct: 515 EGKFEEARELMGEM 528
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 43/304 (14%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T +TI + L+ C +V++A+ F M + G P ++ CN +L R R
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL------LSRLNR 205
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQS-----ITNTPNFVPN-SHY 502
+ +W + + N + M E K K++ I P Y
Sbjct: 206 IENAWVFYADMYRM--EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 503 SSFDKRFS-------------------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
++ + FS F+P TYN ++ C + R ++ EM+ +G
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG-RASEVLREMKEIG 322
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ +S+ ILI C +G++E A M + GM P Y T I +++ A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
L E++ I + VTY L+ ++G + ++ A++ +M G + LI
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 664 EEWC 667
C
Sbjct: 440 YVLC 443
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ ++ + +N LM + KF E+
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL----LTYNALLK 580
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++A ++ +M S G+ PN ++ S+I A +N
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein At4g34830,
chloroplastic OS=Arabidopsis thaliana
GN=At4g34830/At4g34820 PE=2 SV=2
Length = 1089
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--------DVFTYST 368
KL + M+++N+L+ C + Q+I G A+GVL+L D Y+T
Sbjct: 460 KLILNPTMSTFNMLMSVCASS------QDIEG------ARGVLRLVQESGMTADCKLYTT 507
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + +V M ++GV N T+ +LI+ CA AG V +A + +
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N L+ AC ++ DRAF D ++ M+ +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAF-----------------------DVLAEMKAE--- 601
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+H P + LMKACC R K + + G+
Sbjct: 602 -----------TH--------PIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+TI +++C SG+ + A I K M+E ++PD V ++ I V +K L +AF +
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
++ K I+ ++Y +L+ A + + ++ L +Y+ + + + + LI
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACC---NAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
Query: 667 CEG 669
CEG
Sbjct: 760 CEG 762
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 57/396 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ S + + F ++M + DL L + + M + G S N+++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + D +T++T+V A + A+++ + ML G
Sbjct: 271 KEGR---VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++S+I+ G V++A+ + ++M+ C PN+ N L+ + Q + A L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T SK P
Sbjct: 388 ARVLT-SK----------------------------------------------GILPDV 400
Query: 516 TTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L++ C T +RV L EMR+ G P+ ++ +LID+ G ++ AL +LK
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G + V+ Y T I ++ + ++A +F+EM+ + + N VTY TL+ +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 634 LHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCEG 669
+ + Q + M G K + L+ +C G
Sbjct: 521 VEDAAQLM---DQMIMEGQKPDKYTYNSLLTHFCRG 553
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 133/652 (20%), Positives = 253/652 (38%), Gaps = 102/652 (15%)
Query: 8 SSSSSSAIVATQTRLYNH-RNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRD 66
+S S+A+ +T +L + R++P+ +LF LAS + +
Sbjct: 39 ASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASK--------------------KPN 78
Query: 67 LSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIRE 126
S Y ++ +L + G ++ I+E + S + ++ +E A ++
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ---- 134
Query: 127 GRIDCVVGVLK-KLNELGVAPLELFDGSGFKLL-KNECQRLLDSGEVEMFV-GLMEVLEE 183
D ++ V+ ++E G+ P F LL +L++ +M V G+ +
Sbjct: 135 ---DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVST 191
Query: 184 FRLPVKELDEEFRI---VQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
F + +K L ++ + + + P L VP F ++ + ++ DL A
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGL-------VPDEKT-FTTVMQGYIEEGDLDGA 243
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL-NIYVFNSL 297
LR + + S + I+ G C G + +++ +Q+ + Y FN+L
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVH--GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N A +K +E+ M + G D+ +YN ++ C G A E+ ++ +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ TY+T++ + A ++ + S G+ P+ T++SLI
Sbjct: 362 SP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
AM LFEEM GCEP+ N+L+ + + D A + + LS ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV------- 470
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVK 533
TYN L+ C +
Sbjct: 471 ----------------------------------------ITYNTLIDGFCKANKTREAE 490
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ +EM G+S N +++ LID S VE A Q++ M +G PD Y + +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
R +K+A + + M +P++VTY TL+ + G + + L Q
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 175/386 (45%), Gaps = 35/386 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+++ G+C G + I + + + ++Y +NS+++ ++K +
Sbjct: 293 PDQYTFNTLVN--GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M + +YN L+ C A E+ + L +KG+L DV T++++
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL---ARVLTSKGILP-DVCTFNSL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + ++A+++ E+M S G P+ T++ LI++ + G +++A+++ ++M +GC
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEH 484
+ N L+ +A + A +F + S+ V DG + R+ +
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
Q I KP TYN L+ C D + ++ M +
Sbjct: 527 LMDQMIMEGQ-----------------KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ LI +G VE A ++L+ ++ G++ AY I+ R ++ +A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 603 FSLFEEM-KHYQIQPNLVTYITLLRA 627
+LF EM + + P+ V+Y + R
Sbjct: 630 INLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 224/546 (41%), Gaps = 55/546 (10%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDV 265
++ A ++ + D+ + +R + D +ALR ++ ASKK SP + I+
Sbjct: 36 ISFASPHSAALSSTDVKLLDSLR---SQPDDSAALRLFNLASKKPNFSPEPALYEEILLR 92
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE------VYKNMQKLG 319
G G + + I ED++S + F L+ A +F L+ V + + G
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA---QFELQDEILSVVDWMIDEFG 149
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D YN +L + GN++ EI + G+ K DV T++ ++K A
Sbjct: 150 LKPDTHFYNRMLN-LLVDGNSLKLVEISH--AKMSVWGI-KPDVSTFNVLIKALCRAHQL 205
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A+ + EDM S G+ P+ T+++++ G ++ A+ + E+M++ GC ++ N++
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDK------Q 488
+ + + + A + +S + Y NT + +++H + Q
Sbjct: 266 VHGFCKEGRVEDALNFIQE--MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKACCTDYYRVK 533
+ + NS S K K P T TYN L+ C + +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L + + G+ P+ ++ LI + N A+++ + MR G PD Y I
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L +A ++ ++M+ +++TY TL+ + E ++ ++ +M G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE---IFDEMEVHG 500
Query: 652 YKANDTYLKELIEEWCEG-VIQDKNQNQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAE 710
N LI+ C+ ++D Q ++ + Q+P + H +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM----EGQKPDKYTYNSLLTHFCRGGDI 556
Query: 711 NLAIDL 716
A D+
Sbjct: 557 KKAADI 562
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 140/338 (41%), Gaps = 26/338 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN T+I ++ + L S+ + ++ FNSL+ + + +E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G D +YN+L+ + C G E +K +E G + V TY+T++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKL---DEALNMLKQMELSGCAR-SVITYNTLI 477
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A ++ ++M GV+ N++T+++LI+ + VE A L ++M+ G +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNMEHK 485
P+ N LL +A + ++ T + + V G G R+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ N P+++ F + TT N+ +R NE
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL---------FREMLEQNEA-----P 643
Query: 546 PNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPD 582
P+ +S+ I+ C G G + A+ L + E G P+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 187/423 (44%), Gaps = 44/423 (10%)
Query: 262 IIDVCGIC-GDYMKSRAIYEDLRSQ-NVTLNIYVFNSL-MNVNAHDLKFTLEV-YKNMQK 317
+I C C + +K +++LR LN ++SL M++ DL F V Y+ M+
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G + M Y ++ A C G T A+ ++ + LD ++++ F
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIG----FVLDSHIGTSLLLGFCRGL 244
Query: 378 WWQMALKVKEDMLSAGVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ ALKV D++S VT PN++++S LI+ G +E+A L ++M + GC+P+++
Sbjct: 245 NLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 436 CNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+L++A + D+AF LF + + T + G DG + + + K
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ D+ F P+ TYN L+ C D V A L+ M
Sbjct: 364 K-----------------DRIF---PSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ G A+ +LK M ++G+SPD+V+Y I R + A+ L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEE 665
M + I+P+ +T+ ++ A + G L + M + G ++ LI+
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL---MLRKGISLDEVTGTTLIDG 520
Query: 666 WCE 668
C+
Sbjct: 521 VCK 523
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 179/434 (41%), Gaps = 64/434 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D PN++ +ID G+C G ++ + + + ++ +N+L
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 298 MNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N D + E+ M+K ++ ++N L++ C G A + +K +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL---LKRMLD 434
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L D+ +Y+ ++ A K+ M + P+ +T++++INA G +
Sbjct: 435 NG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A ML+ G + L+ C+ + KT+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDG---VCK------------VGKTR---------- 528
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-- 533
D + +E K I TP+ + ++L K C +VK
Sbjct: 529 -DALFILETLVKMRILTTPHSL-----------------NVILDMLSKGC-----KVKEE 565
Query: 534 -ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A++ ++ +GL P+ +++T L+D SG++ G+ +IL++M+ G P+V YT I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGY 652
+ R+++A L M+ + PN VTY +++ G L + L + M + GY
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL---DRALETVRAMVERGY 682
Query: 653 KANDTYLKELIEEW 666
+ ND L++ +
Sbjct: 683 ELNDRIYSSLLQGF 696
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 128/317 (40%), Gaps = 28/317 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ FN LM + + K M G+ D+ SYN+L+ C G+ A ++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + ++ D T++ I+ F +A ML G++ + +T ++LI+
Sbjct: 465 SSMNCFD----IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
G A+ + E +++ N++L + C+ + L +
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V DG + + + + K P Y I++
Sbjct: 581 VVTYTTLVDG---------------LIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + RV+ L++ M+ G+SPNH+++T+++ +G ++ AL+ ++ M E G
Sbjct: 626 LC-QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 582 DVVAYTTAIKVCVRSKR 598
+ Y++ ++ V S++
Sbjct: 685 NDRIYSSLLQGFVLSQK 701
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQ 316
T+ID G+C G + I E L + + N ++++ + K L + +
Sbjct: 516 TLID--GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---KGVLKLDVFTYSTIVKVF 373
KLG++ + +Y L+ +G +I G + LE G L +V+ Y+ I+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSG------DITGSFRILELMKLSGCLP-NVYPYTIIINGL 626
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A K+ M +GV+PN +T++ ++ N G +++A+ M++ G E N
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 434 QCCNILLQACV 444
+ + LLQ V
Sbjct: 687 RIYSSLLQGFV 697
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 58/366 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + ++Q +GV D+ + N+L+ C + LA G++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+ T+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 135 KLG----FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V A+ LF++M G P+ L+ + ++ A L R T K
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI------- 243
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A + +
Sbjct: 244 ----------------------------------------KPDVITFNALIDAFVKEGKF 263
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L NEM + ++PN ++T LI+ G V+ A Q+ +M G PDVVAYT+
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + K++ A +F EM + N +TY TL++ + G + Q+ V+ M
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE---VFSHMVS 380
Query: 650 AGYKAN 655
G N
Sbjct: 381 RGVPPN 386
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 22/343 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H + + L ++ M+ G+ D+ Y L+ C +G A + + K +K
Sbjct: 190 NGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIK 244
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV T++ ++ F + A ++ +M+ + PN T++SLIN G V++A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F M GC P+ L+ + + D A ++F + +S+ + GNT +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF--YEMSQKGLT------GNTITYT 356
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---- 536
+ Q PN V +S R P TYN+L+ C + KALM
Sbjct: 357 TLIQGFGQ--VGKPN-VAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ G++PN ++ +L+ +G +E AL + + MR+ M ++ YT I+ +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++K A +LF + ++PN+VTY T++ R G HE
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + AL +D + + P++ + ++++ G+C G + + ++
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADSLL 235
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + KF E+Y M ++ + ++ +Y L+ C+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K A+K+ +M G+T N
Sbjct: 296 GCVDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + +A +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+M+ ++ + P T
Sbjct: 412 -----------------------DMQKREMDGVA---------------------PNIWT 427
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +MR + I++TI+I +G V+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R +A LF +MK
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 42/385 (10%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L M KLG D+ ++ L+ CL
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL- 154
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + + M + G+ P+
Sbjct: 155 GNRM--EEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M + +P+ N L+ A V+ +F A L+
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ T + G +G D M + + +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM-------------------FYLMETKG 312
Query: 510 SFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P Y L+ C C + EM GL+ N I++T LI G G A
Sbjct: 313 CF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITL 624
++ M G+ P++ Y + + ++K+A +FE+M+ + + PN+ TY L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWK 649
L G L ++ L V++DM K
Sbjct: 432 LHGLCYNGKL---EKALMVFEDMRK 453
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T N+LM C + Y + + +M +G P+ +++T LI+ +E A+ ++ M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G+ PDVV YTT I ++ + A SLF++M++Y I+P++V Y +L+ G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC-EGVIQDKNQNQGEV 681
+ L + M K K + LI+ + EG D + E+
Sbjct: 229 RDADSLL---RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y I++ + + AL + M+ + P+ I ++ L+N A + ++L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--ME 483
G + CN+L+ CQ + + L S+ ++ D T I+ +
Sbjct: 100 IMGVSHDLYTCNLLMNC---FCQSSQPY-LASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++++ V KP Y ++ + C + + AL ++M
Sbjct: 156 NRMEEAMSMVNQMV----------EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + +T L++ SG A +L+ M + + PDV+ + I V+ +
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
A L+ EM I PN+ TY +L+ G + E +Q
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G G ++ ++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ +K L ++++MQK GV ++ +YN+LL C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ +++ E + + K A + A+ + + S GV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK----AGKVKNAVNLFCSLPSKGVK 492
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL +A LF +M + G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 36/379 (9%)
Query: 289 LNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
L I +N+L+N A +F L +VY M + V ++ +YN ++ C GN A
Sbjct: 181 LIIGCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ + L D FTY++++ + K A KV +M G N + ++
Sbjct: 238 NQYVSKI----VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------ 457
LI+ A +++AM LF +M C P + +L+++ + + A L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 458 ------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------- 503
++T+ + ++ + + M K T N + N +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 504 ---SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ P T TYN L+K C ++ ++ ++N+M + P+ +++ LID
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+ ++ + PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 620 TYITLLRARSRYGSLHEVQ 638
Y L+ + G + E
Sbjct: 534 MYTALIDGYCKAGKVDEAH 552
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 197/470 (41%), Gaps = 47/470 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ V E M S ++PNT T++ LI + V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E K PN V + + +K S P + T+N
Sbjct: 518 DLFDSLEQKGVN-----PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKALMNE--MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C D +A + E M +GL P + TILI G+ + A + M G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL A + +M+ + P+L TY +L++ YG L +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTN 689
Query: 639 QCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTLCRRTNSQRPQSL--L 696
V + M G + + LI+ E ++ Q E LC +N ++ L
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLE--MKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 697 LEKVAVHLQKSAAENLAIDLRGLTKVEARIIVLAVLRMMKENYSLGTDEF 746
LEK+ H A++ + G+ +V + V M+ N + E
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 188/441 (42%), Gaps = 80/441 (18%)
Query: 254 PNMYICRTIID-VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
PN++ +ID +C C + K+R + + + + N+ +N+L+N +A D
Sbjct: 356 PNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 305 LKFTLE----------------------VYKNMQKLG------VMADMASYNILLKACCL 336
+ +E V+K M L V+ D+ +YN L+ C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+GN A Y + + +G++ D +TY++++ +K + A + + + GV P
Sbjct: 475 SGNFDSA---YRLLSLMNDRGLVP-DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRL 455
N + +++LI+ AG V++A + E+ML C PNS N L+ C + +L
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG-------KL 583
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKP 513
+ L + V +G +TD I + H+ + +F + YS F + S KP
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTI--LIHR----LLKDGDF--DHAYSRFQQMLSSGTKP 635
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY ++ C + + A +M +MR G+SP+ +++ LI G G A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS------------------LFEEMKHYQ 613
K MR+ G P + + IK + K KQ S L E+M +
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 614 IQPNLVTYITLLRARSRYGSL 634
+ PN +Y L+ G+L
Sbjct: 756 VTPNAKSYEKLILGICEVGNL 776
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 191/459 (41%), Gaps = 56/459 (12%)
Query: 253 SPNMYICRTIIDVCGIC-GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
SPN +I G C + K+ + + + V ++ +NSL++ F
Sbjct: 425 SPNTRTYNELIK--GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G++ D +Y ++ + C + A +++ LE KGV +V Y+ +
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGV-NPNVVMYTAL 538
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A + E MLS PN++T+++LI+ G +++A L E+M++ G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------VALGEDY--DGNTDRISN 481
+P IL+ ++ FD A+ F+ S T+ + Y +G +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 482 MEHKDKQSITNTPNFVPNSHYSSF----DKRFSF-----------KPTTTTYNILMK--- 523
M K +++ + F +S + F+F +P+ T+ L+K
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 524 ------------ACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
C ++ V L+ +M ++PN S+ LI GN+
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 567 ALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ M R +G+SP + + + C + K+ +A + ++M P L + L+
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
+ G E ++ +V+Q++ + GY ++ K +I+
Sbjct: 839 CGLYKKG---EKERGTSVFQNLLQCGYYEDELAWKIIID 874
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 165/428 (38%), Gaps = 41/428 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + K + + A +D+ ++ +PN+ + +ID G C G ++ + E
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID--GYCKAGKVDEAHLMLEK 557
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+N N FN+L++ D LK + + M K+G+ +++ IL+ G+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Y + + + G K D TY+T ++ + A + M GV+P+
Sbjct: 618 ---FDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI + G A + + M GCEP+ L++ +E +
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 460 TLSKTQVALGEDYDGNTDRISNM-EHKDKQSITNTPNF-----------------VPNSH 501
+S ++D + + M EH + TPN V
Sbjct: 734 AMSNMM-----EFDTVVELLEKMVEH------SVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 502 YSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ + P+ +N L+ CC + ++++M VG P S +LI
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G E + + + + G D +A+ I + ++ + LF M+ + +
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 620 TYITLLRA 627
TY L+
Sbjct: 903 TYSLLIEG 910
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L+ C D + NEM G N +++T LI + ++ A+ +
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M++D P V YT IK S+R +A +L +EM+ I+PN+ TY L+ +
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 631 YGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQD 673
+ ++ L M + G N LI +C+ G+I+D
Sbjct: 371 QCKFEKARELLG---QMLEKGLMPNVITYNALINGYCKRGMIED 411
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS-------PNHISWTILID 556
D+RF +K YN L+ + L++EM+ V + PN ++ +++
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLAR-----FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GNVE A Q + + E G+ PD YT+ I + K L AF +F EM +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 617 NLVTYITLLRA 627
N V Y L+
Sbjct: 287 NEVAYTHLIHG 297
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 36/406 (8%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN L++ A KF L + + MQ+LG+ ++ +YNIL+ C LA +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + + T S+++ + K A+ + + M+ G P+TIT+++LI+
Sbjct: 69 GKMMKLGYEP----SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+Q GC+PN +++ + D AF L +K +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 468 LGEDYDGNTDRISNMEH--------KDKQSITNTPNFVPNS----------HYSSFDKRF 509
+ ++ D + H K+ ++ PN V S +S +
Sbjct: 185 V-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 510 S------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
S P T+N L+ A + V+A L ++M + P+ ++ LI+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A Q+ + M PD+ Y T IK +SKR++ LF EM H + + VTY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
TL++ G Q+ V++ M G + L++ C
Sbjct: 364 TTLIQGLFHDGDCDNAQK---VFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 148 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 378
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 379 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK P+ TY TL+RA R G
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 156 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 210
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 211 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 325
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 326 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 382
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 383 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 495
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 367
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 368 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 459
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 460 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 483
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 484 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 610 K 610
+
Sbjct: 527 R 527
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R TYNIL+ C + AL+ +M +G P+ ++ + L++ +
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A+ ++ M E G PD + +TT I + +A +L + M QPNLVTY +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ + G ++ + M A +A+ +I+ C+
Sbjct: 157 VNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P + + + + K+ SL E+M+ I NL TY L+ R ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS---QISLA 64
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LA+ M K GY+ + L L+ +C G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 216/514 (42%), Gaps = 85/514 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ K+ SP + I+DV G G + K + +++RS+ + + + ++++
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A + L+ E + ++ G +YN LL+ AG A + E++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D TY+ +V + A + + A V E M GV PN IT++++I+A AG ++
Sbjct: 349 A----DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RSWTLSKT 464
A+ LF M +AGC PN+ N +L + + + ++ +W T
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN---T 461
Query: 465 QVALGEDYDGNT--DRISNMEHKDKQSITNTPNF-VPNSHYSSFDK-------------- 507
+AL GN D+ N ++ +S P+ N+ S++ +
Sbjct: 462 MLALC----GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 508 -RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN- 563
R F TTYN L+ A D+ + ++++M++ G P S+++++ GN
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 564 ----------------------------------VEGALQILKIMREDGMSPDVVAYTTA 589
+ G+ + + ++ G PD+V + +
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + R+ QA + E ++ + P+LVTY +L+ R G + ++ L + K
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE---K 694
Query: 650 AGYKANDTYLKELIEEWC-EGVIQDKNQNQGEVT 682
+ K + +I+ +C G++Q+ + E+T
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 201/510 (39%), Gaps = 108/510 (21%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E G ++ + KGV+ + TY+T++ +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAG---FSKEAAGVIEMMTKKGVMP-NAITYTTVIDAYG 397
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G +PN
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 400 TWSSLINACANAGLVE-----------------------------------QAMHLFEEM 424
TW++++ C N G+ + A ++ EM
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 425 LQAGCEPNSQCCNILLQACVEACQF--------DRAFRLFR----SWTLSKTQVALGEDY 472
+AG N LL A + D + F+ S++L A G +Y
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 473 DGNTDRISNMEHKDKQSITN--------TPNF-----VPNSHYSSFDKRFSFKPTTTTYN 519
G +RI N K+ Q + NF + + K+ +KP +N
Sbjct: 578 LG-IERIEN-RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ + Y + + ++ +R GLSP+ +++ L+D G A +ILK + +
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD+V+Y T IK R +++A + EM I+P + TY T + + G E+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 638 QQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
+ V + M K + N+ K +++ +C
Sbjct: 756 ED---VIECMAKNDCRPNELTFKMVVDGYC 782
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 180/422 (42%), Gaps = 34/422 (8%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM 315
+ + + G Y + + + + Q L++ + ++++ + K+ +++++ M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+++G + +YN++L G + ++I G + + +KG LK D FT ST++ A
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEMRSKG-LKFDEFTCSTVLSACAR 293
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A + ++ S G P T+T+++L+ AG+ +A+ + +EM + C +S
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 436 CNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDK 487
N L+ A V A A + T ++ T V G D + + K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
++ VPN+ +++ S + N ++K C +M++ G SPN
Sbjct: 414 EA-----GCVPNT--CTYNAVLSLLGKKSRSNEMIKMLC-----------DMKSNGCSPN 455
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+W ++ CG G + ++ + M+ G PD + T I R A ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
EM + TY LL A +R G + V DM G+K +T +++ +
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGEN---VISDMKSKGFKPTETSYSLMLQCYA 572
Query: 668 EG 669
+G
Sbjct: 573 KG 574
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 58/401 (14%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWW 379
+ D+ +Y +L A G A +++ +K + L TY+ I+ VF + W
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL----VTYNVILDVFGKMGRSW 262
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L V ++M S G+ + T S++++ACA GL+ +A F E+ G EP + N L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
LQ +A + A + + ME N P
Sbjct: 323 LQVFGKAGVYTEALSVLK-----------------------EMEE----------NSCPA 349
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+ TYN L+ A + +A ++ M G+ PN I++T +IDA
Sbjct: 350 D--------------SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +G + AL++ M+E G P+ Y + + + R + + +MK PN
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
T+ T+L G V + V+++M G++ + LI + G D ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNR---VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 677 NQGEVTLCRRTNSQRPQSLLLEKVAVHLQKSAAENLAIDLR 717
GE+T + LL +A + EN+ D++
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 169/442 (38%), Gaps = 53/442 (11%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P A I + + +GK AL+ + + K+ PN ++ + G KS
Sbjct: 382 VMPNA-ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG-----KKS 435
Query: 276 RA-----IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYN 328
R+ + D++S + N +N+++ + N KF V++ M+ G D ++N
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ A G+ V A ++YGE+ + V TY+ ++ A W+ V D
Sbjct: 496 TLISAYGRCGSEVDASKMYGEM----TRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA---CVE 445
M S G P ++S ++ A G + + + P+ LL A C
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYS 503
+RAF LF+ +K I N+ F N+ Y
Sbjct: 612 LAGSERAFTLFKKHG-----------------------YKPDMVIFNSMLSIFTRNNMYD 648
Query: 504 SFD------KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILI 555
+ + P TYN LM + ++ + ++ + L P+ +S+ +I
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G ++ A+++L M E G+ P + Y T + + + E M +
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 616 PNLVTYITLLRARSRYGSLHEV 637
PN +T+ ++ R G E
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEA 790
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I E
Sbjct: 602 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG- 715
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 716 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 400 TWSSLINACANAGLVEQAMHL 420
T+ +++ AG +AM
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDF 793
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 59/361 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+Y D++ N++ +N L+ + K ++ M G D SY ++ + C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E+ + + V Y+ ++ ++ A ++ +M+ G++
Sbjct: 228 EVGLVKEGRELAERFEPV---------VSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++S+LIN N+G +E A +ML+ GC PN + L++ C
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-----------F 327
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T + ++ + F +P
Sbjct: 328 LRGTTFDALDL-----------------------------------WNQMIRGFGLQPNV 352
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN L++ C+ VKA + + M +G SPN ++ LI+ G+++GA+ I
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G P+VV YT ++ R + K+A SL E M P++ T+ ++ G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 634 L 634
L
Sbjct: 473 L 473
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + + ++ + ++ N+ +++L+NV N+ ++ M K G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C L G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN A G ++ A++++ +ML +GC PN +++A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 432 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +++TYN L+ C AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A Q+L ++ PDV++YT I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
RS + L E M I P++ T+ L+
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 62/316 (19%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E++ +K +K+ Y+ ++ QM V DM G PN T++
Sbjct: 130 AVEMFYRIKEFGCDPSVKI----YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 185
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
L+ A V+ A L EM GC P++ ++ + E L
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV-------------GLV 232
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K L E ++ P + YN L+
Sbjct: 233 KEGRELAERFE---------------------------------------PVVSVYNALI 253
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C DY LM EM G+SPN IS++ LI+ SG +E A L M + G
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
P++ ++ +K C A L+ +M + + +QPN+V Y TL++ +G+ + +
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN---IVK 370
Query: 640 CLAVYQDMWKAGYKAN 655
++V+ M + G N
Sbjct: 371 AVSVFSHMEEIGCSPN 386
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 123/318 (38%), Gaps = 39/318 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
PN+ T++ G C G+ +K+ +++ + + NI + SL+N A L +
Sbjct: 350 PNVVAYNTLVQ--GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 463
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRIS 480
E +S N LL A A +L ++ + L G +R +
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
M D S R ++P +Y ++ C R L+
Sbjct: 584 QM--LDLVSC----------------GRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 539 MRTVGLSPNHISWTILID 556
M + G+ P+ +W++LI+
Sbjct: 626 MISAGIVPSIATWSVLIN 643
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + F K+ L A+ ++ PN+ + +++ + ++ ++ E +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+N ++ FN+ + +A L + +V++ M Q+ ++ +YN LL A
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E YG + + +GV + TY+T++ +A +AL++ M+ G +P+ IT
Sbjct: 510 ---EEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 401 WSSLINACANAGLVEQAMHLFE 422
+ +I A G E+A + +
Sbjct: 566 MNMIILAYCKQGKAERAAQMLD 587
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
FK T T+ ++++ D V+ L+ +M+ G + + +I G E A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ ++E G P V Y + + R++ + ++ +MK +PN+ TY LL+A
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE-GVIQDKNQ 676
+ + ++ L +M G + +I CE G++++ +
Sbjct: 192 CKNNKVDGAKKLLV---EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
++H PN+ ++D ++ + ++ + V + +N+L++ NA
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L++ M G D + N+++ A C G A ++ V K + DV +
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK--WRPDVIS 602
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y+ ++ + + + + E M+SAG+ P+ TWS LIN
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 445
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR----------------------------DMQNA---- 533
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 534 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 639 GLRPSLQTYTLLL 651
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A ++ + A G D T + I N
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMY------QRMQAGGLSPDTFTYSV----------IINC- 478
Query: 495 NFVPNSHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSP 546
H + K F P TYNI+M A +Y L +M+ G P
Sbjct: 479 -LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++I+++ G G +E A + M++ PD Y + + ++ +++A+ +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
+ M H ++PN+ T +LL S + ++++ + + Q+M G + +
Sbjct: 598 QAMLHAGLRPNVPTCNSLL---STFLRVNKIAEAYELLQNMLALGLRPS 643
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++ + +A L + ML G P+ Q +LL C + + D F
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 111/271 (40%), Gaps = 56/271 (20%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF--- 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY- 518
++ Q A KP TY
Sbjct: 423 --NQMQEA------------------------------------------GCKPDRVTYC 438
Query: 519 ---NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M
Sbjct: 439 TLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 636 EVQQCLAVYQDMWKAGYKANDTYLKELIEEW 666
E + AV+ +M + + ++ L++ W
Sbjct: 557 EAE---AVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M +AG + DT+
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRM-QAGGLSPDTFT 471
Query: 660 KELI 663
+I
Sbjct: 472 YSVI 475
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIE 664
L+ + YG + + + + V+ M +AG K + LI+
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 454 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 182/432 (42%), Gaps = 46/432 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T+N L+ A + V+A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKAN 655
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G +
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDGVPPD 469
Query: 656 DTYLKELIEEWC 667
L++ C
Sbjct: 470 IMTYSILLDGLC 481
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 165/360 (45%), Gaps = 17/360 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 295
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 411
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 412 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
LF + ++PN+VTY T++ S S +Q+ A+ + M + G N LI
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 442
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 443 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 535 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 164/391 (41%), Gaps = 51/391 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F + K R + AL + + PN+ ++I G + + + D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FN+L++ + KF ++Y +M K + D+ +YN L+ C+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++++ + + +K DV TY+T++K F +K + ++ +M G+ +T+
Sbjct: 381 LDKAKQMF---EFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + G + A +F++M+ G P+ +ILL + ++A +F
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-- 494
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ K+++ L D T I M K + + + + S + KP TYN
Sbjct: 495 YMQKSEIKL--DIYIYTTMIEGMCKAGK--VDDGWDL-----FCSLSLK-GVKPNVVTYN 544
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C+ K L+ E A +LK M+EDG
Sbjct: 545 TMISGLCS-----KRLLQE----------------------------AYALLKKMKEDGP 571
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
P+ Y T I+ +R + L EM+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ C + AL+ +M +G P+ ++ + L++ + A+ ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD + +TT I + +A +L + M QPNLVTY ++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG-- 239
Query: 635 HEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ L + M A +A+ +I+ C+
Sbjct: 240 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P +V + + + K+ SL E+M+ +I L TY L+ R ++
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRS---QISLA 139
Query: 641 LAVYQDMWKAGYKANDTYLKELIEEWCEG 669
LA+ M K GY+ + L L+ +C G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 41/384 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ + R++ID G+C G+ ++ A++ + + + N+ ++N+L+ N +
Sbjct: 354 PDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M + G++ ++ ++NIL+ C G A G VK + +KG D+FT++ +
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD---GLVKVMISKGYFP-DIFTFNIL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ + AL++ + ML GV P+ T++SL+N E M ++ M++ GC
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNME 483
PN NILL++ + D A L ++ +++ V G DG N D
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL----- 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
+ Y+ F K + +T TYNI++ A + + L E
Sbjct: 583 ---------------DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M L P+ ++ +++D +GNV + L M E+G P + I R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYI 622
+ +A + M + P V I
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 167/418 (39%), Gaps = 61/418 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R KK D+ + D K PN++ I G+C G+ + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGC 276
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT-LEVY-KNMQKLGVMADMASYNILLKACCLAGN 339
L Q ++ +N+L+ + KF EVY M G+ D +YN L+ C G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA+ I G+ G + D FTY +++ AL + + L G+ PN I
Sbjct: 337 VQLAERIVGDAVF---NGFVP-DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRS 458
+++LI +N G++ +A L EM + G P Q NIL+ C C D +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-------A 445
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L K ++ G + P T+
Sbjct: 446 DGLVKVMISKG-----------------------------------------YFPDIFTF 464
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ T AL ++ M G+ P+ ++ L++ + E ++ K M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G +P++ + ++ R ++L +A L EEMK+ + P+ VT+ TL+ + G L
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 179/425 (42%), Gaps = 45/425 (10%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ C + G + + ++ + + V+L + FN L+ V D+K ++
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-----KLDVFTYST 368
+ K GV+ ++ +YN+ ++ C G E+ G V+ + G L K DV TY+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRG------ELDGAVRMV---GCLIEQGPKPDVITYNN 291
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +Q A M++ G+ P++ T+++LI G+V+ A + + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ L+ + +RA LF ALG+ N + + +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNE--------ALGKGIKPNVILYNTL----IK 399
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-----CCTDYYRVKALMNEMRTVG 543
++N + + ++ P T+NIL+ C +D L+ M + G
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ ++ ILI +E AL+IL +M ++G+ PDV Y + + ++ + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELI 663
++ M PNL T+ LL + RY L E L + ++M + LI
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA---LGLLEEMKNKSVNPDAVTFGTLI 573
Query: 664 EEWCE 668
+ +C+
Sbjct: 574 DGFCK 578
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 150/374 (40%), Gaps = 55/374 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G ++ ++E + + ++ +N++M+V F +VY M+ G+ D+ S+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A + + ++ ++G +++V Y T+V F + + ++
Sbjct: 150 TIRMKSFCKTSRPHAALRL---LNNMSSQGC-EMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
ML++GV+ T++ L+ G V++ L +++++ G PN N+ +Q +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A R+ I P
Sbjct: 266 ELDGAVRMVGCL------------------------------IEQGP------------- 282
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP TYN L+ C + + + + +M GL P+ ++ LI G V+
Sbjct: 283 ----KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +I+ +G PD Y + I +A +LF E I+PN++ Y TL+
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 626 RARSRYGSLHEVQQ 639
+ S G + E Q
Sbjct: 399 KGLSNQGMILEAAQ 412
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT +YN +M Y +A + MR G++P+ S+TI + + + AL+
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M G +VVAY T + + + LF +M + L T+ LLR
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 630 RYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWCE 668
+ G +V++C + + K G N I+ C+
Sbjct: 228 KKG---DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 167/410 (40%), Gaps = 55/410 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ S + ++Y++ ++ DL E+ +M+ G ++ YN+L+ C
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E G K L K LK DV TY T+V + +++ L++ ++ML +
Sbjct: 274 KKQKV---WEAVGIKKDLAGKD-LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ SSL+ G +E+A++L + ++ G PN N L+ + + +F A L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKR 508
F DR+ + + PN V S D
Sbjct: 390 F--------------------DRMGKIGLR--------PNDVTYSILIDMFCRRGKLDTA 421
Query: 509 FSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF K + YN L+ C D + M EM L P +++T L+
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + AL++ M G++P + +TT + R+ ++ A LF EM + ++PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYLKELIEEWC 667
VTY ++ G + + + L ++M + G + + LI C
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFL---KEMTEKGIVPDTYSYRPLIHGLC 588
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 194/491 (39%), Gaps = 95/491 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYE-----------DLRSQNVTLNIYVFNSLMNVN 301
SPN+++ +ID +C K R +E LR +VT +I + M
Sbjct: 364 SPNLFVYNALID--SLC----KGRKFHEAELLFDRMGKIGLRPNDVTYSILID---MFCR 414
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVL 359
L L M G+ + YN L+ C G+ A+ E+ K LE
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT--- 471
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
V TY++++ + AL++ +M G+ P+ T+++L++ AGL+ A+
Sbjct: 472 ---VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM + +PN N++++ E +AF + T
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT------------------- 569
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKALMNE 538
VP++ +S++P ++ C T K ++
Sbjct: 570 -------------EKGIVPDT--------YSYRP------LIHGLCLTGQASEAKVFVDG 602
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ N I +T L+ G +E AL + + M + G+ D+V Y I ++ K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
K F L +EM ++P+ V Y +++ A+S+ G E ++ M G N+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA---FGIWDLMINEGCVPNEVT 719
Query: 659 LKELIEEWCE-GVIQDKNQNQGEVTLCRRTN--SQRPQSL-------LLEKVAVHLQKSA 708
+I C+ G + N+ EV LC + S P + +L K V +QK+
Sbjct: 720 YTAVINGLCKAGFV-----NEAEV-LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 709 AENLAIDLRGL 719
+ AI L+GL
Sbjct: 774 ELHNAI-LKGL 783
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 181/448 (40%), Gaps = 41/448 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + K + ALR Y +P++Y T++ G + ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ NV N +N ++ D+ E K M + G++ D SY L+ CL G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ + H KG +L+ Y+ ++ F + AL V ++M+ GV + +
Sbjct: 593 ASEAK-VFVDGLH---KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ LI+ + L +EM G +P+ ++ A + F AF + W
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI---W 705
Query: 460 TL-----------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
L + T V G G + + K Q +++ PN V Y F
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK-MQPVSSVPNQVT---YGCF--- 758
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+IL K D + L N + GL N ++ +LI G +E A
Sbjct: 759 ---------LDILTKGE-VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ M DG+SPD + YTT I R +K+A L+ M I+P+ V Y TL+
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 629 SRYGSLHEVQQCLAVYQDMWKAGYKAND 656
G E+ + + +M + G N+
Sbjct: 868 CVAG---EMGKATELRNEMLRQGLIPNN 892
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 184/450 (40%), Gaps = 26/450 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R A +D K PN +ID+ G + + ++ + L++Y
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 293 VFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N + D+ M + + +Y L+ C G A +Y E
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE- 497
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ KG+ ++T++T++ A + A+K+ +M V PN +T++ +I
Sbjct: 498 --MTGKGIAP-SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A +EM + G P++ L+ Q A ++F L K L E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVD-GLHKGNCELNE 612
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
Y G E K +++++ V Y +L+
Sbjct: 613 ICYTGLLHGFCR-EGKLEEALSVCQEMVQRG----------VDLDLVCYGVLIDGSLKHK 661
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D L+ EM GL P+ + +T +IDA +G+ + A I +M +G P+ V YT
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ + +A L +M+ PN VTY L ++ G + ++Q+ + ++ +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV-DMQKAVELHNAI 779
Query: 648 WKAGYKANDTYLKELIEEWC-EGVIQDKNQ 676
K G AN LI +C +G I++ ++
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRIEEASE 808
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 123/309 (39%), Gaps = 52/309 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T S ++ + + +A+++ DM+S G+ P+ ++ +I + + +A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M GC+ N N+L+ C+ + + V + +D G
Sbjct: 251 AHMEATGCDVNIVPYNVLIDG---LCKKQKVWE----------AVGIKKDLAG------- 290
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
KD KP TY L+ C ++ +M+EM
Sbjct: 291 ---KD------------------------LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ SP+ + + L++ G +E AL ++K + + G+SP++ Y I + ++
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTYL 659
+A LF+ M ++PN VTY L+ R G L L+ +M G K +
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL---DTALSFLGEMVDTGLKLSVYPY 440
Query: 660 KELIEEWCE 668
LI C+
Sbjct: 441 NSLINGHCK 449
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+++ + + K D A +D PN +I+ G+C G ++ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN--GLCKAGFVNEAEVL 739
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N + +++ D++ +E++ + K G++A+ A+YN+L++ C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ + + GV D TY+T++ + A+++ M G+
Sbjct: 799 RQGRIEEASEL---ITRMIGDGV-SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
P+ + +++LI+ C AG + +A L EML+ G PN++
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 191/467 (40%), Gaps = 27/467 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D +F +R + + R L A A+ + + ++ C +I G + +Y+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ V +N+Y N ++N D K +Q+ GV D+ +YN L+ A G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
L +E + + + KG V+TY+T++ ++ A +V +ML +G++P++
Sbjct: 285 ---LMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+ SL+ G V + +F +M P+ C + ++ + D+A F S
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ L D T I K S+ + D TY
Sbjct: 401 V----KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD--------VVTY 448
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C +A L NEM L P+ + TILID GN++ A+++ + M+E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ DVV Y T + + + A ++ +M +I P ++Y L+ A G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 637 VQQCLAVYQDMWKAGYKANDTYLKELIEEWCEGVIQDKNQNQGEVTL 683
V+ +M K +I+ +C + N + GE L
Sbjct: 569 A---FRVWDEMISKNIKPTVMICNSMIKGYC----RSGNASDGESFL 608
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 186/414 (44%), Gaps = 29/414 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP+ R+++ GD +++ ++ D+RS++V ++ F+S+M++ + +L L
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++++ G++ D Y IL++ C G +A + E+ +G +DV TY+TI+
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ---QGC-AMDVVTYNTIL 452
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A K+ +M + P++ T + LI+ G ++ AM LF++M +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N LL + D A ++ +SK + Y + + + H +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADM-VSKEILPTPISYSILVNALCSKGHLAEA-- 569
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ +D+ S KPT N ++K C + ++ + +M + G P
Sbjct: 570 -----------FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ IS+ LI N+ A ++K M E+ G+ PDV Y + + R ++K+A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKANDTY 658
+ +M + P+ TY ++ + S + + ++ +M + G+ +D +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMING---FVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 174/429 (40%), Gaps = 57/429 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ T+I G ++ + + + + +Y +N+++N K+ EV
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G+ D +Y LL C G+ V ++++ +++ ++ V+ D+ +S+++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR---SRDVVP-DLVCFSSMMS 383
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F + AL + AG+ P+ + ++ LI G++ AM+L EMLQ GC
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N +L + A +LF T + AL D T I H ++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMT----ERALFPDSYTLTILIDG--HCKLGNLQ 497
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
N +KR TYN L+ D K + +M + + P I
Sbjct: 498 NAMELFQKMK----EKRIRLD--VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 550 SWTILIDA----------------------------CGG-------SGNVEGALQILKIM 574
S++IL++A C SGN L+ M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYITLLRARSRYG 632
+G PD ++Y T I VR + + +AF L ++M+ Q + P++ TY ++L R
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 633 SLHEVQQCL 641
+ E + L
Sbjct: 672 QMKEAEVVL 680
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 219 RADILFCN-FVREFGKKRDLVSA--LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
R D++ N + FGK D+ +A + A SK+ L +P Y I V +C G
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS----ILVNALCSKGHLA 567
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++++ S+N+ + + NS++ + NA D + LE M G + D SYN
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE---KMISEGFVPDCISYN 624
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEA-KGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ N A +G VK +E +G L DVFTY++I+ F + A V
Sbjct: 625 TLIYGFVREENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
M+ GV P+ T++ +IN + + +A + +EMLQ G P+ +
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 43/362 (11%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + M++ + D Y+I++ C G+ A ++ E +E KG K D+ Y
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE---MEIKG-FKADIIIY 285
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+++ F A W K+ DM+ +TP+ + +S+LI+ G + +A L +EM+Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ L+ + Q D+A + + M K
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHM-----------------------LDLMVSKG 382
Query: 487 KQSITNTPNFVPNSHYSS--------FDKRFSFKPT---TTTYNILMKACCT--DYYRVK 533
T N + N + + ++ S + T TYN L++ C K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L EM + + P+ +S+ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYK 653
+ ++ A+ LF + ++P++ TY ++ + GSL E +++ M + G+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD---LLFRKMEEDGHS 559
Query: 654 AN 655
N
Sbjct: 560 PN 561
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 153/383 (39%), Gaps = 58/383 (15%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+F+ + +DL L++ K M+ G+ ++ + +I++ CC LA G++
Sbjct: 78 LFSVVARTKQYDL--VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L + D T+ST++ AL++ + M+ G P IT ++L+N G
Sbjct: 136 LGYEP----DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V A+ L + M++ G +PN +L+ ++ Q A L R
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR--------------- 236
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
ME + K Y+I++ C D
Sbjct: 237 --------KMEER------------------------KIKLDAVKYSIIIDGLCKDGSLD 264
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A L NEM G + I +T LI +G + ++L+ M + ++PDVVA++ I
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V+ +L++A L +EM I P+ VTY +L+ + L + L + M
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL---MVSK 381
Query: 651 GYKANDTYLKELIEEWCEGVIQD 673
G N LI +C+ + D
Sbjct: 382 GCGPNIRTFNILINGYCKANLID 404
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 234/541 (43%), Gaps = 80/541 (14%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
++ + + L +GR+ E +V+ +V + ++++L + +G+ + G++ V
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMV----EMGHKPTLITLNALVNGLCLN---GKVSDAV 197
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ ++ E G P E+ G K++ C+ SG+ + + L+ +EE ++ + +
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVM---CK----SGQTALAMELLRKMEERKIKLDAVKY 250
Query: 194 EFRIVQLCVNKP---DVNLAIRYACIVPRADIL-FCNFVREF---GKKRDLVSALRAYDA 246
I LC + NL +ADI+ + +R F G+ D LR D
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR--DM 308
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K+ ++ P++ +ID G ++ +++++ + ++ + + SL++ +
Sbjct: 309 IKRKIT-PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + M G ++ ++NIL+ C A E++ + + +GV+ D
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF---RKMSLRGVVA-DTV 423
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T+++ F + ++A ++ ++M+S V P+ +++ L++ + G E+A+ +FE++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ E + NI++ A + D A+ LF S L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK---------------------- 521
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
KP TYNI++ C +A L +M
Sbjct: 522 -------------------------GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G SPN ++ ILI A G G+ + ++++ ++ G S D + + + RLK++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM-LSDGRLKKS 615
Query: 603 F 603
F
Sbjct: 616 F 616
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 159/396 (40%), Gaps = 40/396 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + N+Y + ++N L + KLG D +++ L+ CL G
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ + + K L T + +V A+ + + M+ G PN +T+
Sbjct: 161 ALELVDRMVEMGHKPTL----ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++ +G AM L +M + + ++ +I++ + D AF LF +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 463 K--------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------------- 500
T + G Y G D + + +D TP+ V S
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKL-LRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 501 ----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
H + S P T TY L+ C + KA +++ M + G PN ++ IL
Sbjct: 336 AEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ + ++ L++ + M G+ D V Y T I+ +L+ A LF+EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+P++V+Y LL G E ++ L +++ + K+
Sbjct: 454 RPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 51/268 (19%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S + V A K + + L + + M G+ N T S +IN C + A
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EP++ + L+ C+E + A L DR+
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 170
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M HK PT T N L+ C + A L++ M
Sbjct: 171 MGHK---------------------------PTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++ ++ SG A+++L+ M E + D V Y+ I + L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA 627
AF+LF EM+ + +++ Y TL+R
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 21/337 (6%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+TLN V +N D ++ M + G + +Y +LK C +G T LA E+
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLID---RMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E + + KLD YS I+ A + +M G + I +++LI
Sbjct: 235 ---LRKMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG + L +M++ P+ + L+ V+ + A L + Q
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QR 346
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ D T I +++ N H P T+NIL+ C
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKAN--------HMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
L +M G+ + +++ LI G +E A ++ + M + PD+V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+Y + + ++A +FE+++ +++ ++ Y
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 14/202 (6%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM P I ++ L + + L + K M G++ ++ + I C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAGYKA 654
R ++L AFS ++ +P+ VT+ TL+ G V + L + M + G+K
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG---RVSEALELVDRMVEMGHKP 175
Query: 655 NDTYLKELIEEWC-EGVIQDKNQNQGEVTLCRRT--NSQRPQSLLLEKVAVHLQKSAAEN 711
L L+ C G + D V L R +P + V + KS
Sbjct: 176 TLITLNALVNGLCLNGKVSDA------VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 712 LAIDLRGLTKVEARIIVLAVLR 733
LA++L L K+E R I L ++
Sbjct: 230 LAMEL--LRKMEERKIKLDAVK 249
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,374,503
Number of Sequences: 539616
Number of extensions: 10366126
Number of successful extensions: 35458
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 27029
Number of HSP's gapped (non-prelim): 4375
length of query: 750
length of database: 191,569,459
effective HSP length: 125
effective length of query: 625
effective length of database: 124,117,459
effective search space: 77573411875
effective search space used: 77573411875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)