Query 004482
Match_columns 750
No_of_seqs 255 out of 765
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 00:09:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004482.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004482hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 2E-242 5E-247 2044.1 63.9 732 10-750 61-852 (852)
2 PLN00150 potassium ion transpo 100.0 2E-240 3E-245 2029.8 64.3 726 12-750 8-779 (779)
3 PLN00148 potassium transporter 100.0 4E-237 9E-242 2002.7 61.3 704 44-750 15-785 (785)
4 PLN00149 potassium transporter 100.0 3E-236 7E-241 1997.2 63.0 707 41-750 11-779 (779)
5 TIGR00794 kup potassium uptake 100.0 9E-214 2E-218 1802.5 57.1 645 53-750 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 5E-191 1E-195 1595.7 49.3 564 52-750 11-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 1E-181 2E-186 1509.2 37.3 490 54-583 1-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 7E-177 2E-181 1447.9 46.7 568 50-750 15-627 (627)
9 TIGR00911 2A0308 L-type amino 91.2 0.39 8.6E-06 54.9 6.5 87 178-268 165-255 (501)
10 COG0531 PotE Amino acid transp 84.4 6.9 0.00015 43.5 10.7 176 177-359 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 80.6 15 0.00033 40.9 11.6 169 178-359 133-316 (429)
12 TIGR00907 2A0304 amino acid pe 75.8 15 0.00033 41.9 9.9 25 179-203 144-168 (482)
13 TIGR03813 put_Glu_GABA_T putat 75.3 31 0.00068 39.3 12.3 19 459-477 434-452 (474)
14 TIGR00930 2a30 K-Cl cotranspor 70.1 31 0.00068 43.6 11.4 25 178-202 203-227 (953)
15 PRK10435 cadB lysine/cadaverin 69.4 69 0.0015 36.2 13.1 23 181-203 124-146 (435)
16 PRK15049 L-asparagine permease 65.5 38 0.00082 39.3 10.3 23 180-202 146-168 (499)
17 PRK10655 potE putrescine trans 64.9 1.7E+02 0.0037 32.9 15.1 43 180-222 125-170 (438)
18 PF14362 DUF4407: Domain of un 62.8 64 0.0014 34.9 10.8 85 399-483 14-111 (301)
19 PF13520 AA_permease_2: Amino 60.6 24 0.00053 39.1 7.3 221 178-416 118-367 (426)
20 TIGR00906 2A0303 cationic amin 58.0 1.4E+02 0.0029 35.5 13.2 45 178-222 161-208 (557)
21 KOG3145 Cystine transporter Cy 53.0 23 0.0005 39.2 5.2 38 243-281 287-341 (372)
22 PRK11021 putative transporter; 52.2 2.1E+02 0.0044 32.0 12.9 27 178-204 115-141 (410)
23 TIGR00908 2A0305 ethanolamine 49.7 85 0.0018 35.4 9.4 24 180-203 123-146 (442)
24 PRK11357 frlA putative fructos 46.0 2.6E+02 0.0057 31.6 12.6 45 179-223 128-175 (445)
25 COG4059 MtrE Tetrahydromethano 44.4 20 0.00044 38.0 3.1 30 455-484 258-287 (304)
26 PRK10249 phenylalanine transpo 43.9 1.4E+02 0.0031 34.1 10.2 102 181-284 138-247 (458)
27 PRK10746 putative transport pr 42.4 1.6E+02 0.0035 33.7 10.3 25 459-483 427-451 (461)
28 TIGR00905 2A0302 transporter, 41.6 1E+02 0.0023 35.2 8.7 44 317-360 278-321 (473)
29 PF06570 DUF1129: Protein of u 37.7 1.4E+02 0.003 30.8 8.0 21 458-478 179-199 (206)
30 TIGR00910 2A0307_GadC glutamat 36.7 2.8E+02 0.0061 32.4 11.2 46 257-302 203-250 (507)
31 TIGR01773 GABAperm gamma-amino 36.2 5.6E+02 0.012 29.0 13.3 44 180-223 128-174 (452)
32 KOG3643 GABA receptor [Signal 35.4 27 0.00058 40.4 2.6 90 353-446 225-324 (459)
33 PRK10644 arginine:agmatin anti 35.3 1.3E+02 0.0028 34.1 8.0 23 180-202 127-149 (445)
34 TIGR03810 arg_ornith_anti argi 34.7 4.3E+02 0.0092 30.3 12.1 45 316-360 273-317 (468)
35 PRK11387 S-methylmethionine tr 33.4 2.9E+02 0.0063 31.6 10.5 21 182-202 133-153 (471)
36 PRK10238 aromatic amino acid t 31.9 2.3E+02 0.0049 32.4 9.3 114 181-298 129-251 (456)
37 TIGR03428 ureacarb_perm permea 29.5 9.1E+02 0.02 27.7 15.4 25 178-202 144-168 (475)
38 COG2179 Predicted hydrolase of 29.0 13 0.00028 37.9 -1.1 68 678-746 47-118 (175)
39 PRK10580 proY putative proline 27.7 2.8E+02 0.0061 31.6 9.1 24 457-480 423-446 (457)
40 TIGR01940 nqrE NADH:ubiquinone 27.5 2E+02 0.0042 30.3 7.1 47 379-425 14-62 (200)
41 PF00324 AA_permease: Amino ac 26.7 44 0.00096 38.1 2.5 34 251-284 203-238 (478)
42 PRK11049 D-alanine/D-serine/gl 26.4 5.4E+02 0.012 29.5 11.2 105 255-360 218-333 (469)
43 PF05297 Herpes_LMP1: Herpesvi 26.2 22 0.00048 39.1 0.0 60 422-484 126-190 (381)
44 PRK05151 electron transport co 25.9 2.5E+02 0.0053 29.4 7.4 47 379-425 15-63 (193)
45 PF05313 Pox_P21: Poxvirus P21 23.0 1.3E+02 0.0029 31.2 4.7 59 283-352 90-149 (189)
46 cd05900 Ig_Aggrecan Immunoglob 22.5 1.1E+02 0.0025 28.6 4.0 31 556-586 72-102 (112)
47 PF02508 Rnf-Nqr: Rnf-Nqr subu 21.4 3.5E+02 0.0075 28.0 7.5 87 379-466 15-110 (190)
48 PF05545 FixQ: Cbb3-type cytoc 20.8 84 0.0018 25.2 2.4 28 468-495 20-47 (49)
49 PF08733 PalH: PalH/RIM21; In 20.3 6.3E+02 0.014 28.5 9.9 135 340-483 168-321 (348)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2.2e-242 Score=2044.07 Aligned_cols=732 Identities=48% Similarity=0.853 Sum_probs=663.8
Q ss_pred cccccccccccccccCCCCchhhhhhcccc--ccccchhhHHHHHHHHHhccceecccccccC-----------------
Q 004482 10 DNETNKGSMWVLDQKLDQPMDEEAGRLRNM--YREKKFSSLLLLRFAFQSLGVVYGDLGTSPL----------------- 70 (750)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~La~~slGVVyGDIGTSPL----------------- 70 (750)
+++..++||||+++++|+ +++|+++++++ |+.++.++|+++.|||||+||||||||||||
T Consensus 61 ~~~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~d 139 (852)
T PLN00151 61 EDGNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEED 139 (852)
T ss_pred cccchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhh
Confidence 345668999999999999 99999998777 4456778888899999999999999999999
Q ss_pred --------------------------cCCCCCChHHHHHHHhhccccCccCCCCCCCccchhcccccccc-chhhhhHHH
Q 004482 71 --------------------------ANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTK 123 (750)
Q Consensus 71 --------------------------Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~ 123 (750)
|||||||||||||||+|||+|++++||||++|+++++|+.+.++ +.+++.++|
T Consensus 140 IlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k 219 (852)
T PLN00151 140 VLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIK 219 (852)
T ss_pred eeeehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHH
Confidence 99999999999999999999999999999999999999988766 677788999
Q ss_pred HHhhhhhhhhHHHHHHhhhhhhhhccCcccccchheecccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccc
Q 004482 124 RWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWL 203 (750)
Q Consensus 124 ~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~ 203 (750)
++||+|+++|++++++|++|+||+||||+||||||||||||||++..|++++++||||||+||++||++||+||+|||++
T Consensus 220 ~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~ 299 (852)
T PLN00151 220 ERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFA 299 (852)
T ss_pred HHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhh
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCceeeeecceEEeeccchhhhccCCCCCCcceehhh
Q 004482 204 FAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAF 283 (750)
Q Consensus 204 F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw 283 (750)
|||||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||
T Consensus 300 FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw 379 (852)
T PLN00151 300 FGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAF 379 (852)
T ss_pred hccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHhHHHHHhhcchhhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEE
Q 004482 284 TVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVV 363 (750)
Q Consensus 284 ~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~ 363 (750)
+++|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+
T Consensus 380 ~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIv 459 (852)
T PLN00151 380 TCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKII 459 (852)
T ss_pred hhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccCCceeechhHHHHHHHhheeEEeecCchhhHhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 004482 364 HTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVV 443 (750)
Q Consensus 364 hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~i 443 (750)
|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++
T Consensus 460 HTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~i 539 (852)
T PLN00151 460 HTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSV 539 (852)
T ss_pred eCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCc
Q 004482 444 ECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGV 523 (750)
Q Consensus 444 e~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~v 523 (750)
|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++++|+
T Consensus 540 e~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gv 619 (852)
T PLN00151 540 ELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGI 619 (852)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred hhHHHHHHhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-chHHHHHHHHHHHHHH
Q 004482 524 PHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLF 602 (750)
Q Consensus 524 P~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~-~~~~f~~~Lv~~L~~F 602 (750)
|++|.||++|||++||++||||||++|+|+||++|||+++|+++++|++|||++||||||..+ ++++||++|+++|++|
T Consensus 620 P~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~f 699 (852)
T PLN00151 620 PAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKF 699 (852)
T ss_pred CHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986 7899999999999999
Q ss_pred HHhhhhccCCCC-C-C--------CccccccccccccccccCC--CCCCCCCCccccccccCCC-CCcCCCccccccccC
Q 004482 603 VRLEAMMEGCSD-S-D--------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSSVDSI-VPVKSPLHVNSTVMS 669 (750)
Q Consensus 603 I~~e~~~~~~~~-~-~--------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~ 669 (750)
||+|+.....++ + . +++................ ......+++......+.+. .+..++++|.
T Consensus 700 i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 774 (852)
T PLN00151 700 IRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS----- 774 (852)
T ss_pred HHhhhhhccccccccccccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc-----
Confidence 999885321111 0 0 1111000000000000000 0000000000000000000 0001122321
Q ss_pred cccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEE
Q 004482 670 SSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFY 749 (750)
Q Consensus 670 ~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvy~ 749 (750)
+. +++++||+++|++|+|+||+||+||++||||++|+|+||++|||+|+|||||||+|.++|+|||++|+||||+||
T Consensus 775 -~~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~ 851 (852)
T PLN00151 775 -DE--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYM 851 (852)
T ss_pred -cc--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEE
Confidence 11 568899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 004482 750 V 750 (750)
Q Consensus 750 v 750 (750)
|
T Consensus 852 v 852 (852)
T PLN00151 852 V 852 (852)
T ss_pred C
Confidence 7
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.5e-240 Score=2029.77 Aligned_cols=726 Identities=56% Similarity=0.996 Sum_probs=662.6
Q ss_pred cccccccccccccCCCCchhhhhhccccccccchhhHHHHHHHHHhccceecccccccC---------------------
Q 004482 12 ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPL--------------------- 70 (750)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~~slGVVyGDIGTSPL--------------------- 70 (750)
+.+++||||+++++|+|+|+||++++++++.++.+|+.++.|||||+||||||||||||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilGv 87 (779)
T PLN00150 8 ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIGA 87 (779)
T ss_pred CCCccchhhCCCCCCCccCcchhhcccccccccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHhH
Confidence 45689999999999999999999999997788999999999999999999999999999
Q ss_pred ----------------------cCCCCCChHHHHHHHhhccccCccCCCCCCCccchhccccccccchhhhhHHHHHhhh
Q 004482 71 ----------------------ANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEH 128 (750)
Q Consensus 71 ----------------------Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~ 128 (750)
|||||||||||||||+|||+|++++|||++.|+++++|+++ +..+..++|++||+
T Consensus 88 LSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~---~~~r~~~~k~~lE~ 164 (779)
T PLN00150 88 LSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD---NMNRKTRIQRKLEN 164 (779)
T ss_pred HHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc---cchhhhHHHHhhhc
Confidence 99999999999999999999999999999999999999763 33344569999999
Q ss_pred hhhhhHHHHHHhhhhhhhhccCcccccchheecccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHH
Q 004482 129 QTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 208 (750)
Q Consensus 129 ~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm 208 (750)
|+.+|++++++|++|+||+||||+||||||||||||||++..|++++++||||||+||++||++||+||+|||++|||||
T Consensus 165 ~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm 244 (779)
T PLN00150 165 SRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244 (779)
T ss_pred chHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHH
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHh
Q 004482 209 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVF 288 (750)
Q Consensus 209 ~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~ 288 (750)
++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++||
T Consensus 245 ~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~ 324 (779)
T PLN00150 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVY 324 (779)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCc
Q 004482 289 PCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKK 368 (750)
Q Consensus 289 P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~ 368 (750)
|||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++
T Consensus 325 P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~ 404 (779)
T PLN00150 325 PCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNK 404 (779)
T ss_pred HHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeechhHHHHHHHhheeEEeecCchhhHhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 004482 369 FLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYF 448 (750)
Q Consensus 369 ~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~ 448 (750)
++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++||
T Consensus 405 ~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~ 484 (779)
T PLN00150 405 VHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYF 484 (779)
T ss_pred cCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHH
Q 004482 449 SAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFS 528 (750)
Q Consensus 449 sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~ 528 (750)
|||+.|||||||+||++|++++++|++||||++++|+++.+|++|+++|.++.++.++.||||+|+|||++++|+|++|.
T Consensus 485 sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~ 564 (779)
T PLN00150 485 SAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFS 564 (779)
T ss_pred HHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred HHHhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhh
Q 004482 529 HFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAM 608 (750)
Q Consensus 529 h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~ 608 (750)
||++|||++||++||+|||++|+|+||++||++++++++++|++|||++||||||..+++++||++|+++|++|||+|+.
T Consensus 565 h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~ 644 (779)
T PLN00150 565 HFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESF 644 (779)
T ss_pred HHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999998999999999999999988999999999999999999975
Q ss_pred ccCCCCCCCccccccccccccccccCC-CC--CCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHH
Q 004482 609 MEGCSDSDEYSLYGQQTLQSTDGLLNN-NG--NSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFL 685 (750)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L 685 (750)
....+ +++++.....++...++ .++ .. ...+.........++...+..++.+|. +. +++++||+++|
T Consensus 645 ~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~v~eEl~~L 714 (779)
T PLN00150 645 REQSD-LESMAASWTPEELMGEG-NSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVS------GH--SSDTQDEVAFL 714 (779)
T ss_pred ccccc-ccccccccccccccccC-Ccccccccccccccccccccccccccccccccccc------cc--cccHHHHHHHH
Confidence 32211 11222221110000000 000 00 000000000000000000111222221 11 56889999999
Q ss_pred HHhHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 004482 686 NSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 686 ~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvy~v 750 (750)
++|+|+||+||+||++||||++|||+||++||++|+|||||||+|.++|+|||+||+||||+|||
T Consensus 715 ~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 715 NKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=4.2e-237 Score=2002.66 Aligned_cols=704 Identities=52% Similarity=0.929 Sum_probs=642.3
Q ss_pred chhhHH---HHHHHHHhccceecccccccC---------------------------------------------cCCCC
Q 004482 44 KFSSLL---LLRFAFQSLGVVYGDLGTSPL---------------------------------------------ANDSG 75 (750)
Q Consensus 44 ~~~~~~---~~~La~~slGVVyGDIGTSPL---------------------------------------------Adn~G 75 (750)
..+|+. ++.|||||+|||||||||||| |||||
T Consensus 15 ~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~G 94 (785)
T PLN00148 15 QLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNG 94 (785)
T ss_pred cchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCC
Confidence 345655 799999999999999999999 99999
Q ss_pred CChHHHHHHHhhccccCccCCCCCCCccchhccccccccchhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCccccc
Q 004482 76 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTP 155 (750)
Q Consensus 76 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTP 155 (750)
||||||||||+|||+|++++||||++|+++++|++..+...+++.++|++||+|+++|.+++++|++|+||+||||+|||
T Consensus 95 EGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP 174 (785)
T PLN00148 95 EGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP 174 (785)
T ss_pred CchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999999999999999999999999988666655667889999999999999999999999999999999999
Q ss_pred chheecccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecC
Q 004482 156 AISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFS 235 (750)
Q Consensus 156 AISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~Aln 235 (750)
|||||||||||++..|++++++||||||+||++||++||+||+|||++|||||++||++|+++|+|||++|||+||+|||
T Consensus 175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln 254 (785)
T PLN00148 175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS 254 (785)
T ss_pred hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCcccCcccc
Q 004482 236 PVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYR 315 (750)
Q Consensus 236 P~ya~~f~~~~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~ 315 (750)
|+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+
T Consensus 255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~ 334 (785)
T PLN00148 255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD 334 (785)
T ss_pred HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeEEeecC
Q 004482 316 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKN 395 (750)
Q Consensus 316 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~ 395 (750)
++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhh
Q 004482 396 QSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYV 475 (750)
Q Consensus 396 s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~ 475 (750)
|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEEEeeccccC
Q 004482 476 WHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVP 555 (750)
Q Consensus 476 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~ 555 (750)
||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999888888889999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhhccC------CCCCCCcccccccccccc
Q 004482 556 EEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEG------CSDSDEYSLYGQQTLQST 629 (750)
Q Consensus 556 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~~~~------~~~~~~~~~~~~~~~~~~ 629 (750)
++||++++|+++++|++|||++||||||.++++++||++|+++|++|||+|+...+ .++++++++.+..++...
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999988999999999999999999985321 111223333322111000
Q ss_pred -cccc--C------CCCCCCCCCccc---cccccCCC-CCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEE
Q 004482 630 -DGLL--N------NNGNSTSSNQDL---TMSSVDSI-VPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHI 696 (750)
Q Consensus 630 -~~~~--~------~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYI 696 (750)
.... + +...+..+...+ +..+.++. ...+++++|+... +.+. +++++||+++|++|+|+||+||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~El~~L~~A~eaGVvYI 731 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPE-NPGM--DPSVREELMDLIEAKEAGVAYI 731 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeecccc-cccc--cchHHHHHHHHHHHHHcCcEEE
Confidence 0000 0 000000000000 01111111 2345677776332 2233 6789999999999999999999
Q ss_pred eeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 004482 697 LGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 697 lG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvy~v 750 (750)
+||++||||++|||+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus 732 lG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 732 MGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred eccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=3.4e-236 Score=1997.23 Aligned_cols=707 Identities=50% Similarity=0.873 Sum_probs=638.6
Q ss_pred cccchhhHHHHHHHHHhccceecccccccC---------------------------------------------cCCCC
Q 004482 41 REKKFSSLLLLRFAFQSLGVVYGDLGTSPL---------------------------------------------ANDSG 75 (750)
Q Consensus 41 ~~~~~~~~~~~~La~~slGVVyGDIGTSPL---------------------------------------------Adn~G 75 (750)
|+++.+|+.++.|||||+|||||||||||| |||||
T Consensus 11 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv~ivlrAdn~G 90 (779)
T PLN00149 11 HVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNG 90 (779)
T ss_pred ccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhEEEEEEecCCC
Confidence 445678999999999999999999999999 99999
Q ss_pred CChHHHHHHHhhccccCccCCCCCCCccchhcccccccc----chhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCc
Q 004482 76 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH----EKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDG 151 (750)
Q Consensus 76 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDG 151 (750)
||||||||||+|||+|++++||||++|+++++|+++.+. ..+++.++|++||+|+.+|++++++|++|+||+||||
T Consensus 91 EGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDg 170 (779)
T PLN00149 91 EGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDG 170 (779)
T ss_pred CchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999887644 2334678999999999999999999999999999999
Q ss_pred ccccchheecccccccccCCCCCCceE-ehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcce
Q 004482 152 ILTPAISVLSASGGIKVDHPHMSNGVV-VLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSV 230 (750)
Q Consensus 152 viTPAISVLSAVeGL~v~~p~l~~~~V-v~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~V 230 (750)
+||||||||||||||++..|...++++ |||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+|
T Consensus 171 vlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~V 250 (779)
T PLN00149 171 VLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHV 250 (779)
T ss_pred ccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhH
Confidence 999999999999999999976545455 9999999999999999999999999999999999999999999999999999
Q ss_pred eeecCHHHHHHHHHhcCCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCC---
Q 004482 231 LKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD--- 307 (750)
Q Consensus 231 l~AlnP~ya~~f~~~~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~--- 307 (750)
|+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+
T Consensus 251 l~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~ 330 (779)
T PLN00149 251 YQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIES 330 (779)
T ss_pred hhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cccCcccccccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhh
Q 004482 308 HVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI 387 (750)
Q Consensus 308 ~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l 387 (750)
+++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+
T Consensus 331 ~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i 410 (779)
T PLN00149 331 DYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCL 410 (779)
T ss_pred cccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHH
Confidence 56679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeecCchhhHhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHH
Q 004482 388 AVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAA 467 (750)
Q Consensus 388 ~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~ 467 (750)
++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.||+||||+||++|+
T Consensus 411 ~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~ 490 (779)
T PLN00149 411 AVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSF 490 (779)
T ss_pred hheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEE
Q 004482 468 AFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK 547 (750)
Q Consensus 468 ~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~ 547 (750)
+++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||
T Consensus 491 v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik 570 (779)
T PLN00149 491 IFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIK 570 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEE
Confidence 99999999999999999999999999999999988888899999999999999999999999999999999999999999
Q ss_pred EeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhhccCC--C----CCCCcccc
Q 004482 548 YLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGC--S----DSDEYSLY 621 (750)
Q Consensus 548 ~~~vP~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~~~~~--~----~~~~~~~~ 621 (750)
++|+|+||++||++++|++++++++|||++||||||..+++++||++|+++|++|||+|+...+. + +++++++.
T Consensus 571 ~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~ 650 (779)
T PLN00149 571 SVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVV 650 (779)
T ss_pred ECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccc
Confidence 99999999999999999999999999999999999999889999999999999999999743211 1 12333333
Q ss_pred cccccccc-ccccC-CC-CCCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEee
Q 004482 622 GQQTLQST-DGLLN-NN-GNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILG 698 (750)
Q Consensus 622 ~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG 698 (750)
+..+.... ....+ +. .....+....+...+.+....+++++|+... +... +++++||+++|++|||+||+||+|
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~v~eEl~~L~~A~eaGVvYIlG 727 (779)
T PLN00149 651 GTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPE-SPKI--DRGAREELQELMEAREAGMAYILG 727 (779)
T ss_pred ccccccccccccccccccccccccccccccccCccccCcccceeecccc-cccc--chhHHHHHHHHHHHHHcCcEEEec
Confidence 22111000 00000 00 0000000000000111111223577776332 2233 678999999999999999999999
Q ss_pred ecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 004482 699 NTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 699 ~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvy~v 750 (750)
|++||||++|||+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 728 ~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 728 HSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred CceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=8.6e-214 Score=1802.46 Aligned_cols=645 Identities=43% Similarity=0.770 Sum_probs=613.7
Q ss_pred HHHHhccceecccccccC------------------------------------------cCCCCCChHHHHHHHhhccc
Q 004482 53 FAFQSLGVVYGDLGTSPL------------------------------------------ANDSGQGGTFALYSLLCRHA 90 (750)
Q Consensus 53 La~~slGVVyGDIGTSPL------------------------------------------Adn~GEGG~fALysLl~r~~ 90 (750)
|++||+|||||||||||| |||||||||||||||+||++
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~ 80 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYA 80 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhc
Confidence 579999999999999999 99999999999999999999
Q ss_pred cCccCCCCCCCccchhccccccccchhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCcccccchheecccccccccC
Q 004482 91 KVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDH 170 (750)
Q Consensus 91 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGL~v~~ 170 (750)
|++..|||++.|+++++|+...+++.+++.++|+++|++++.|++++++|++|+||+||||+||||||||||||||++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~ 160 (688)
T TIGR00794 81 KISARPVHQELDRAESSYSTKSPNLLNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVA 160 (688)
T ss_pred cccCCCcccchhhhhhhcccccccccchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccC
Confidence 99999999999999999998887777778899999999988899999999999999999999999999999999999999
Q ss_pred CCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCce
Q 004482 171 PHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDG 250 (750)
Q Consensus 171 p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g 250 (750)
|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.|
T Consensus 161 p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~ 240 (688)
T TIGR00794 161 PSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVG 240 (688)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCce
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCcccCcccccccCcchHHHHHHHH
Q 004482 251 WTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVAT 330 (750)
Q Consensus 251 ~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~vlAt 330 (750)
|.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||
T Consensus 241 ~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAt 320 (688)
T TIGR00794 241 WVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIAT 320 (688)
T ss_pred eeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeEEeecCchhhHhhhhhhhHHH
Q 004482 331 AAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIV 410 (750)
Q Consensus 331 lAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~v 410 (750)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 321 lAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~t 400 (688)
T TIGR00794 321 LAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGT 400 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhc
Q 004482 411 MLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHS 490 (750)
Q Consensus 411 M~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~~~~~~~ 490 (750)
|+|||+|+++||+.+||||++++++|+++|+.+|++|||||+.||+||||+||++|++++++|++|+|||+++++++.++
T Consensus 401 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~ 480 (688)
T TIGR00794 401 FLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEH 480 (688)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCC-CCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 004482 491 KVSMAWILGLGPS-LGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 569 (750)
Q Consensus 491 ~~~~~~~~~~~~~-~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~ 569 (750)
++|+++|++.+.+ .+.+||||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++++
T Consensus 481 ~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~ 560 (688)
T TIGR00794 481 RVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE 560 (688)
T ss_pred CCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC
Confidence 9999999885544 445899999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCcccccc
Q 004482 570 FHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMS 649 (750)
Q Consensus 570 ~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (750)
|+|||++||||||++|+|++|+++++++|++||+++......+ . . ..
T Consensus 561 -g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~~~---------~---~----------------~~---- 607 (688)
T TIGR00794 561 -GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNLNN---------L---E----------------EL---- 607 (688)
T ss_pred -CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcccc---------c---c----------------cc----
Confidence 8999999999999999999999999999999999864310000 0 0 00
Q ss_pred ccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccC
Q 004482 650 SVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE 729 (750)
Q Consensus 650 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkNcR~ 729 (750)
+++ +. +.+.+||++++++++|+|++|++||++++++++|+++||+.||++|.|||||||+
T Consensus 608 ~~~----------------~~----~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~ 667 (688)
T TIGR00794 608 SDK----------------RC----RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARR 667 (688)
T ss_pred ccc----------------cc----ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccC
Confidence 000 00 1235789999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCeEeeeeEEEC
Q 004482 730 NSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 730 ~~~~L~IPh~~LlEVGMvy~v 750 (750)
+...++|||+|++||||.||+
T Consensus 668 ~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 668 APKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred hhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999986
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.5e-191 Score=1595.66 Aligned_cols=564 Identities=30% Similarity=0.555 Sum_probs=535.7
Q ss_pred HHHHHhccceecccccccC---------------------------------------------cCCCCCChHHHHHHHh
Q 004482 52 RFAFQSLGVVYGDLGTSPL---------------------------------------------ANDSGQGGTFALYSLL 86 (750)
Q Consensus 52 ~La~~slGVVyGDIGTSPL---------------------------------------------Adn~GEGG~fALysLl 86 (750)
.|+++|+|||||||||||| |||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 4889999999999999999 9999999999999999
Q ss_pred hccccCccCCCCCCCccchhccccccccchhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCcccccchheecccccc
Q 004482 87 CRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGI 166 (750)
Q Consensus 87 ~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGL 166 (750)
+|+.+ ++.|.+++++|++|+||+||||+||||||||||||||
T Consensus 91 ~~~~~--------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL 132 (622)
T PRK10745 91 GRNTS--------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGL 132 (622)
T ss_pred hhhcc--------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcc
Confidence 87543 1345579999999999999999999999999999999
Q ss_pred cccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhc
Q 004482 167 KVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRG 246 (750)
Q Consensus 167 ~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~ 246 (750)
++..|++ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+|
T Consensus 133 ~v~~p~l-~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~ 210 (622)
T PRK10745 133 EIVAPQL-DTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEY 210 (622)
T ss_pred cccCCCC-CCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhC
Confidence 9999999 569999999999999999999999999999999999999999999999998 79999999999999999999
Q ss_pred CCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCcccCcccccccCcchHHHH
Q 004482 247 GRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVF 326 (750)
Q Consensus 247 g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~ 326 (750)
|..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++
T Consensus 211 ~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~v 290 (622)
T PRK10745 211 KTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLL 290 (622)
T ss_pred CCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeEEeecCchhhHhhhhhh
Q 004482 327 IVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTA 406 (750)
Q Consensus 327 vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiA 406 (750)
++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+|
T Consensus 291 iLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiA 370 (622)
T PRK10745 291 ILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIA 370 (622)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHH
Q 004482 407 VVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEF 486 (750)
Q Consensus 407 V~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~~~ 486 (750)
|++||++||+|++++++.+|+|+++++++++++|+++|++||+||+.|++||||+|+++|++++++|+||++||++++++
T Consensus 371 Vt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~ 450 (622)
T PRK10745 371 VTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRR 450 (622)
T ss_pred heeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEEEeeccccCCCceEEEEEec
Q 004482 487 EMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIG 566 (750)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~~~ 566 (750)
+.++++|+++|++.+++.++.||||+|+|+|+.++++|+++.||+||||++||++||+||+++|+|+||++||+++++++
T Consensus 451 ~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~ 530 (622)
T PRK10745 451 MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS 530 (622)
T ss_pred HHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC
Confidence 99999999999999988887899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCccc
Q 004482 567 PKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDL 646 (750)
Q Consensus 567 ~~~~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (750)
+ |+|||++||||||+||+|+.+++. +.+.
T Consensus 531 ~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g--------------------------------------- 559 (622)
T PRK10745 531 P---TFWRVVASYGWRETPNVEEVFHRC---------GLEG--------------------------------------- 559 (622)
T ss_pred C---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC---------------------------------------
Confidence 7 799999999999999998776531 0000
Q ss_pred cccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCc---hHHHHHHHHHHHHH
Q 004482 647 TMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSK---FYKKIAIDYIYAFL 723 (750)
Q Consensus 647 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkak~~Ss---~lKK~vIn~~Y~FL 723 (750)
.+++ -..++|.+||+.++..++++ |-|| +|.||
T Consensus 560 --------------~~~~-------------------------~~~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m 595 (622)
T PRK10745 560 --------------LSCR-------------------------MMETSFFMSHESLILGKRPWYLRLRGK-----LFLLL 595 (622)
T ss_pred --------------CCCC-------------------------ccceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHH
Confidence 0000 01579999999999888887 6565 68999
Q ss_pred HhhccCCCcccccCCCCeEeeeeEEEC
Q 004482 724 RKICRENSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 724 RkNcR~~~~~L~IPh~~LlEVGMvy~v 750 (750)
.||++++...+++|++|++|+|+.+|+
T Consensus 596 ~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 596 QRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 999999999999999999999999985
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1e-181 Score=1509.16 Aligned_cols=490 Identities=47% Similarity=0.828 Sum_probs=479.5
Q ss_pred HHHhccceecccccccC--------------------------------------------cCCCCCChHHHHHHHhhcc
Q 004482 54 AFQSLGVVYGDLGTSPL--------------------------------------------ANDSGQGGTFALYSLLCRH 89 (750)
Q Consensus 54 a~~slGVVyGDIGTSPL--------------------------------------------Adn~GEGG~fALysLl~r~ 89 (750)
|++|+|||||||||||| |||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 68999999999999999 9999999999999999954
Q ss_pred ccCccCCCCCCCccchhccccccccchhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCcccccchheeccccccccc
Q 004482 90 AKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVD 169 (750)
Q Consensus 90 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGL~v~ 169 (750)
.+ ++++.|..++++|++|+||+||||+||||||||||||||++.
T Consensus 81 ~~------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~ 124 (534)
T PF02705_consen 81 LK------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVA 124 (534)
T ss_pred hc------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhcc
Confidence 33 344666778999999999999999999999999999999999
Q ss_pred CCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCc
Q 004482 170 HPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRD 249 (750)
Q Consensus 170 ~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~ 249 (750)
.|+++ ++|+|+||+||++||++||+||+|||++|||||++||++||++|+|||++| |+||+|+||+|+++||.+||+.
T Consensus 125 ~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~~ 202 (534)
T PF02705_consen 125 TPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGWI 202 (534)
T ss_pred CCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCCc
Confidence 99996 799999999999999999999999999999999999999999999999995 9999999999999999999999
Q ss_pred eeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCcccCcccccccCcchHHHHHHH
Q 004482 250 GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVA 329 (750)
Q Consensus 250 g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~vlA 329 (750)
||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++|
T Consensus 203 ~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilA 282 (534)
T PF02705_consen 203 GFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILA 282 (534)
T ss_pred hhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeEEeecCchhhHhhhhhhhHH
Q 004482 330 TAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI 409 (750)
Q Consensus 330 tlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~ 409 (750)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++
T Consensus 283 tlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~ 362 (534)
T PF02705_consen 283 TLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTG 362 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 004482 410 VMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMH 489 (750)
Q Consensus 410 vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~~~~~~ 489 (750)
||++||+|++++++.+||||.+++++++++|+++|+.||+||+.||+||||+||++|++++++|+||+|||+++++++++
T Consensus 363 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~ 442 (534)
T PF02705_consen 363 TMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERE 442 (534)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 004482 490 SKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 569 (750)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~~~~~~ 569 (750)
+++++++++++.++.++.|+||+|+|+|+..+++|+++.||++||+++||+++|+|++++|+|+||++||++++++++
T Consensus 443 ~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~-- 520 (534)
T PF02705_consen 443 NKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP-- 520 (534)
T ss_pred cCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCEEEEEEEeeccc
Q 004482 570 FHMFRCVARYGYKD 583 (750)
Q Consensus 570 ~~~~r~~~ryGy~d 583 (750)
+++|||++||||||
T Consensus 521 ~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 DGFYRVTLRYGFME 534 (534)
T ss_pred CCEEEEEEEecCCC
Confidence 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-177 Score=1447.94 Aligned_cols=568 Identities=34% Similarity=0.617 Sum_probs=539.9
Q ss_pred HHHHHHHhccceecccccccC---------------------------------------------cCCCCCChHHHHHH
Q 004482 50 LLRFAFQSLGVVYGDLGTSPL---------------------------------------------ANDSGQGGTFALYS 84 (750)
Q Consensus 50 ~~~La~~slGVVyGDIGTSPL---------------------------------------------Adn~GEGG~fALys 84 (750)
+..++++|+|||||||||||| |||||||||++|++
T Consensus 15 ~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~a 94 (627)
T COG3158 15 TKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLMA 94 (627)
T ss_pred chhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHHH
Confidence 457899999999999999999 99999999999999
Q ss_pred HhhccccCccCCCCCCCccchhccccccccchhhhhHHHHHhhhhhhhhHHHHHHhhhhhhhhccCcccccchheecccc
Q 004482 85 LLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASG 164 (750)
Q Consensus 85 Ll~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVe 164 (750)
|++|.++ +...++.++|++|+|+|+|||+||||||||||||
T Consensus 95 L~~~~~~---------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvE 135 (627)
T COG3158 95 LARRAAP---------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAVE 135 (627)
T ss_pred HHHhhcC---------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHhc
Confidence 9998765 3445899999999999999999999999999999
Q ss_pred cccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHH
Q 004482 165 GIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFR 244 (750)
Q Consensus 165 GL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~ 244 (750)
||++++|.++ ++|+|+|++||++||++||+||++||++|||||++||+++|.+|++||.+ ||+||+|+|||||++|+.
T Consensus 136 GL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~ 213 (627)
T COG3158 136 GLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLL 213 (627)
T ss_pred cccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHH
Confidence 9999999995 69999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred hcCCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCcccCcccccccCcchHH
Q 004482 245 RGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWP 324 (750)
Q Consensus 245 ~~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P 324 (750)
++|..||+.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++||
T Consensus 214 ~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP 293 (627)
T COG3158 214 EEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIP 293 (627)
T ss_pred hCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeEEeecCchhhHhhhh
Q 004482 325 VFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYG 404 (750)
Q Consensus 325 ~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYG 404 (750)
+++|||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|+++++.++++||+|++||+|||
T Consensus 294 ~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYG 373 (627)
T COG3158 294 LVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYG 373 (627)
T ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 004482 405 TAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRY 484 (750)
Q Consensus 405 iAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~~~~~iM~~W~~G~~~~~ 484 (750)
+|||++|+|||+|++.+++..|||+.+.+.++.++|+++|..||+||+.|++||||+|+++|++++++|+||++|+++.+
T Consensus 374 iAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~ 453 (627)
T COG3158 374 IAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILF 453 (627)
T ss_pred hheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhHHHHHHhhCCccceEEEEEEEEEeeccccCCCceEEEEE
Q 004482 485 EFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKR 564 (750)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~ 564 (750)
++..++++|+|.|++.+++.++.|||||+||+|+..+.+|.+++||+|||+++||++||+++++.++|+|+++||+.+++
T Consensus 454 ~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~ 533 (627)
T COG3158 454 EKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQ 533 (627)
T ss_pred HHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEEEeecccCCCchHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCc
Q 004482 565 IGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQ 644 (750)
Q Consensus 565 ~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~Lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (750)
+++ +++|+.++|||||+||+|+.+.. ++.+
T Consensus 534 l~~---~f~rV~l~~Gfme~pnvp~~l~~---------~~~~-------------------------------------- 563 (627)
T COG3158 534 LSD---DFVRVVLHFGFMETPNVPRALRL---------CRKK-------------------------------------- 563 (627)
T ss_pred ccC---ceEEEEEEeeccCCCCHHHHHHH---------Hhhc--------------------------------------
Confidence 998 69999999999999999876643 1110
Q ss_pred cccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHH
Q 004482 645 DLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLR 724 (750)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLR 724 (750)
+.+|+ . + ...|.+|++.++++++|++.+ +-- -.|.+|.
T Consensus 564 ---------------G~~f~--i----m-------------------~tsFfl~re~l~~~~~~g~~~-w~~-~lfi~l~ 601 (627)
T COG3158 564 ---------------GLKFD--I----M-------------------ETSFFLSRESLIASKNSGMPR-WRD-RLFIALA 601 (627)
T ss_pred ---------------Cceec--c----c-------------------ceEEEEEeeeeecCCCCCchH-HHH-HHHHHHH
Confidence 11221 0 0 357999999999999999876 333 4789999
Q ss_pred hhccCCCcccccCCCCeEeeeeEEEC
Q 004482 725 KICRENSVIFNVPHESLLNVGQIFYV 750 (750)
Q Consensus 725 kNcR~~~~~L~IPh~~LlEVGMvy~v 750 (750)
||.-++...++||.+|++|+|-.-|+
T Consensus 602 r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 602 RNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 99999999999999999999965543
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=91.17 E-value=0.39 Score=54.94 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=42.8
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCceee-e
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWT-S 253 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~-~ 253 (750)
...++++++++++.+.-+|....++ .+.-+.++=++.+.+.|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 3467788888899999999765554 333333322233344555544331111 11222111000 01122332 3
Q ss_pred ecceEEeeccchhhh
Q 004482 254 LGGIMLSITGTEALF 268 (750)
Q Consensus 254 LG~vvL~iTG~EAly 268 (750)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 556677788887643
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=84.36 E-value=6.9 Score=43.49 Aligned_cols=176 Identities=18% Similarity=0.178 Sum_probs=100.7
Q ss_pred eEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcC---Cceeee
Q 004482 177 VVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGG---RDGWTS 253 (750)
Q Consensus 177 ~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g---~~g~~~ 253 (750)
....++.+++++++.++-+|....++...-..++=++.+.++.+..+..++......+++... ++ ..-...
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 206 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP------GGGSFGGILAA 206 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc------ccchHHHHHHH
Confidence 467889999999999999999888876555544444444444444444432222222221110 00 012234
Q ss_pred ecceEEeeccchhh--hcc-CCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCC-ccc-----Ccccc---ccc-Cc
Q 004482 254 LGGIMLSITGTEAL--FAD-LAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD-HVV-----DAFYR---SIP-DS 320 (750)
Q Consensus 254 LG~vvL~iTG~EAl--yAD-lGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~-~~~-----npFy~---~~P-~~ 320 (750)
++.++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+.. ... .+
T Consensus 207 ~~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~ 285 (466)
T COG0531 207 ILLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNW 285 (466)
T ss_pred HHHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccH
Confidence 55667888898865 332 333 455566665554444444444444444333332 111 44432 222 35
Q ss_pred chHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCc
Q 004482 321 IYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 359 (750)
Q Consensus 321 ~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 359 (750)
..+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 286 ~~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 286 GAIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 666666666666666667777777777777888999998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=80.65 E-value=15 Score=40.92 Aligned_cols=169 Identities=18% Similarity=0.164 Sum_probs=80.5
Q ss_pred EehhHHHHHHHHHhhhcccccccc---cchhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHHHHhcCCcee-ee
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVG---WLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW-TS 253 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg---~~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~-~~ 253 (750)
+..++++++++...+..+|....+ ..+..+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHH
Confidence 334567778888888888866554 4666665554444445555432 22222222221 11111 11
Q ss_pred ecceEEeeccchhhhc--cCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccC-C-C---cccCccc----ccccCcch
Q 004482 254 LGGIMLSITGTEALFA--DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNH-Q-D---HVVDAFY----RSIPDSIY 322 (750)
Q Consensus 254 LG~vvL~iTG~EAlyA--DlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~-p-~---~~~npFy----~~~P~~~~ 322 (750)
+...+.+.+|=|+.-. +-=+-.+|.+..|-..-+.-+. +.|+.-....... | + ..++|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 2234556667776543 3223445666666543222222 2244333222211 1 1 1123432 22233444
Q ss_pred HHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCc
Q 004482 323 WPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 359 (750)
Q Consensus 323 ~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 359 (750)
+-+.+.+.++..-+..+.+.+.=-++...-+.|.+|+
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 4444444444444444545455455555567899997
No 12
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=75.80 E-value=15 Score=41.85 Aligned_cols=25 Identities=8% Similarity=-0.057 Sum_probs=17.9
Q ss_pred ehhHHHHHHHHHhhhcccccccccc
Q 004482 179 VLVAVVILVGLFSLQHYGTDRVGWL 203 (750)
Q Consensus 179 v~is~~ILv~LF~iQ~~GT~kvg~~ 203 (750)
..+.+++++++..+.-+|....+++
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 5567777788888888887655443
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=75.25 E-value=31 Score=39.34 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.6
Q ss_pred CcHHHHHHHHHHHhhhhhh
Q 004482 459 GWVPLVIAAAFLVIMYVWH 477 (750)
Q Consensus 459 GW~pl~la~~~~~iM~~W~ 477 (750)
-|.+++++.+++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3788888888776666565
No 14
>TIGR00930 2a30 K-Cl cotransporter.
Probab=70.06 E-value=31 Score=43.61 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=18.6
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGW 202 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~ 202 (750)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4457778888888888899855443
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=69.36 E-value=69 Score=36.22 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=17.1
Q ss_pred hHHHHHHHHHhhhcccccccccc
Q 004482 181 VAVVILVGLFSLQHYGTDRVGWL 203 (750)
Q Consensus 181 is~~ILv~LF~iQ~~GT~kvg~~ 203 (750)
++++++.++..+.-+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 45566667888999998877664
No 16
>PRK15049 L-asparagine permease; Provisional
Probab=65.50 E-value=38 Score=39.33 Aligned_cols=23 Identities=13% Similarity=0.094 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHhhhccccccccc
Q 004482 180 LVAVVILVGLFSLQHYGTDRVGW 202 (750)
Q Consensus 180 ~is~~ILv~LF~iQ~~GT~kvg~ 202 (750)
.++.++++++..+.-+|....+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777888888888766554
No 17
>PRK10655 potE putrescine transporter; Provisional
Probab=64.94 E-value=1.7e+02 Score=32.90 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHhhhcccccccccc---hhhHHHHHHHHHHHHhhhh
Q 004482 180 LVAVVILVGLFSLQHYGTDRVGWL---FAPIVLLWFLLIGGIGMLN 222 (750)
Q Consensus 180 ~is~~ILv~LF~iQ~~GT~kvg~~---F~PIm~vWf~~i~~~Giyn 222 (750)
.+++++++.+..+.-+|+...+++ ..-..++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666677888999997666553 2233333344444555443
No 18
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=62.83 E-value=64 Score=34.93 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=51.7
Q ss_pred hHhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH----HHHHHHHhhhhcccCCCc---------HHHHH
Q 004482 399 IGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLV----VECTYFSAVLFKVDQGGW---------VPLVI 465 (750)
Q Consensus 399 l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~~~~~F~~----ie~~f~sa~l~Kv~~GGW---------~pl~l 465 (750)
-=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++. +|-..+|+.-.+-..+.. +-+++
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvli 93 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLI 93 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 34578999999999999988888888888876666666655544 565555543332221222 22344
Q ss_pred HHHHHHhhhhhhHhHHHH
Q 004482 466 AAAFLVIMYVWHYGTVKR 483 (750)
Q Consensus 466 a~~~~~iM~~W~~G~~~~ 483 (750)
|.++...+..+-+..++.
T Consensus 94 aivIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 94 AIVISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444444455555555443
No 19
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=60.64 E-value=24 Score=39.06 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=122.1
Q ss_pred EehhHHHHHHHHHhhhcccccccccc---hhhHHH-HHHHHHHHHhhhhccccCc--------ceeeecCHHHHHHHHHh
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGWL---FAPIVL-LWFLLIGGIGMLNIWKYDS--------SVLKAFSPVYIYRYFRR 245 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~~---F~PIm~-vWf~~i~~~GiynI~~~~P--------~Vl~AlnP~ya~~f~~~ 245 (750)
...+++++++..+.+.-+|....+++ ++=+.+ +-++.+.+.|++...+... ..+...+|.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 189 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSFSGFNSLSFSLSTFFPSGWPG-------- 189 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHH----SHSCSSCSSSSH--------
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecccccccccccccccCCccccc--------
Confidence 45678888888999999998766653 333333 3555566667765543100 111112221
Q ss_pred cCCceeeeecceEEeeccchhhhccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhccCCCc----ccC------cccc
Q 004482 246 GGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDH----VVD------AFYR 315 (750)
Q Consensus 246 ~g~~g~~~LG~vvL~iTG~EAlyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll~~p~~----~~n------pFy~ 315 (750)
-+..+...+.+.+|-|+.=.-.+-.-+|.+..|=..-+.-+.++.-+..-++...-|.+ .+| .+++
T Consensus 190 ----~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (426)
T PF13520_consen 190 ----FLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLAS 265 (426)
T ss_dssp ----HHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHH
T ss_pred ----hhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhc
Confidence 13345667788888888655444455566666554433333333333333444443321 112 2233
Q ss_pred c-ccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhh-eeE--E
Q 004482 316 S-IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI-AVT--A 391 (750)
Q Consensus 316 ~-~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l-~vv--~ 391 (750)
. -.++..+.+.+.+.++.+-+-.+.+.+.--++.+.-+-|.+|+ +..|+++ +| .|..-.++...+- ++. .
T Consensus 266 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~ 339 (426)
T PF13520_consen 266 AVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLF 339 (426)
T ss_dssp HHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHH
Confidence 2 2467888888888888887777777777777778888899994 2333332 22 3655444433332 222 2
Q ss_pred ee---cCchhhHhhhhhhhHHHHHHHHH
Q 004482 392 GF---KNQSQIGNAYGTAVVIVMLATTL 416 (750)
Q Consensus 392 ~F---~~s~~l~~AYGiAV~~vM~iTT~ 416 (750)
.| ++-+.+.+.+.+......+++.+
T Consensus 340 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 340 LFIPQSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp TTSSSSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 23356677766666666666643
No 20
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=58.00 E-value=1.4e+02 Score=35.50 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=26.9
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHHhhhh
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLN 222 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~vWf~~i~~~Giyn 222 (750)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456777777777888899766654 34444344344445555543
No 21
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=53.02 E-value=23 Score=39.18 Aligned_cols=38 Identities=34% Similarity=0.749 Sum_probs=29.5
Q ss_pred HHhcCCceeeeecceEEeeccchh-----------------hhccCCCCCCcceeh
Q 004482 243 FRRGGRDGWTSLGGIMLSITGTEA-----------------LFADLAHFPVSAIQI 281 (750)
Q Consensus 243 ~~~~g~~g~~~LG~vvL~iTG~EA-----------------lyADlGHFg~~~Ir~ 281 (750)
+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.=+.+
T Consensus 287 ~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 287 FTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred ceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 345567888 68999999999975 689999998664443
No 22
>PRK11021 putative transporter; Provisional
Probab=52.21 E-value=2.1e+02 Score=32.04 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=21.1
Q ss_pred EehhHHHHHHHHHhhhcccccccccch
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGWLF 204 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~~F 204 (750)
...+++++++++..+.-+|....+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356778888888999999988877643
No 23
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=49.72 E-value=85 Score=35.38 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHhhhcccccccccc
Q 004482 180 LVAVVILVGLFSLQHYGTDRVGWL 203 (750)
Q Consensus 180 ~is~~ILv~LF~iQ~~GT~kvg~~ 203 (750)
.+++++++++..+.-+|....+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666777778888888777664
No 24
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=46.02 E-value=2.6e+02 Score=31.57 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=26.2
Q ss_pred ehhHHHHHHHHHhhhccccc---ccccchhhHHHHHHHHHHHHhhhhc
Q 004482 179 VLVAVVILVGLFSLQHYGTD---RVGWLFAPIVLLWFLLIGGIGMLNI 223 (750)
Q Consensus 179 v~is~~ILv~LF~iQ~~GT~---kvg~~F~PIm~vWf~~i~~~GiynI 223 (750)
..+++++++.+..+.-+|.. |+...+.=+.++=++.+.++|++.+
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566677777788888875 4444444333444444555666543
No 25
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=44.45 E-value=20 Score=38.01 Aligned_cols=30 Identities=23% Similarity=0.622 Sum_probs=25.9
Q ss_pred ccCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 004482 455 VDQGGWVPLVIAAAFLVIMYVWHYGTVKRY 484 (750)
Q Consensus 455 v~~GGW~pl~la~~~~~iM~~W~~G~~~~~ 484 (750)
=.+|||..++.++++..+..+|++--+.+.
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 348999999999999999999998666554
No 26
>PRK10249 phenylalanine transporter; Provisional
Probab=43.90 E-value=1.4e+02 Score=34.08 Aligned_cols=102 Identities=25% Similarity=0.272 Sum_probs=50.7
Q ss_pred hHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHHhhhhccccCcceeeecCHHHHHHH--HHhcCCce-eeee
Q 004482 181 VAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRY--FRRGGRDG-WTSL 254 (750)
Q Consensus 181 is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f--~~~~g~~g-~~~L 254 (750)
++.++++++.++.-+|....+. .+.=+-++.++.+.++|++-+...++.- ..++.+.... +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 4566677777888888876654 2333334455555555655433322110 1111111000 00122222 2344
Q ss_pred cceEEeeccchhh--hccCCCCCCcceehhhh
Q 004482 255 GGIMLSITGTEAL--FADLAHFPVSAIQIAFT 284 (750)
Q Consensus 255 G~vvL~iTG~EAl--yADlGHFg~~~Ir~aw~ 284 (750)
..++.+.+|-|.. .|+=-+-.+|.|-.|-.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 5566778888865 55555666666665544
No 27
>PRK10746 putative transport protein YifK; Provisional
Probab=42.37 E-value=1.6e+02 Score=33.75 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=17.0
Q ss_pred CcHHHHHHHHHHHhhhhhhHhHHHH
Q 004482 459 GWVPLVIAAAFLVIMYVWHYGTVKR 483 (750)
Q Consensus 459 GW~pl~la~~~~~iM~~W~~G~~~~ 483 (750)
.......+.+++.+++.+....+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567777888887777776654433
No 28
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=41.61 E-value=1e+02 Score=35.19 Aligned_cols=44 Identities=9% Similarity=-0.035 Sum_probs=26.0
Q ss_pred ccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCce
Q 004482 317 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 360 (750)
Q Consensus 317 ~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ 360 (750)
..++...-+.+.+.+++.-+.-+.+.+.--+..+.-+-|.+|+.
T Consensus 278 ~g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 278 VGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 34444443444344444445555666666666777788999973
No 29
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=37.75 E-value=1.4e+02 Score=30.82 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=16.9
Q ss_pred CCcHHHHHHHHHHHhhhhhhH
Q 004482 458 GGWVPLVIAAAFLVIMYVWHY 478 (750)
Q Consensus 458 GGW~pl~la~~~~~iM~~W~~ 478 (750)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999888766653
No 30
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=36.70 E-value=2.8e+02 Score=32.37 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=24.2
Q ss_pred eEEeeccchhh--hccCCCCCCcceehhhhHhHhHHHHHhhcchhhhh
Q 004482 257 IMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYL 302 (750)
Q Consensus 257 vvL~iTG~EAl--yADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~l 302 (750)
++.+.+|-|+. .|+==+--+|.+-.|-...+.-+.++.++|--++.
T Consensus 203 ~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i~ 250 (507)
T TIGR00910 203 FIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSIA 250 (507)
T ss_pred HHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 45567888865 44444555666655554443334444444443433
No 31
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=36.15 E-value=5.6e+02 Score=29.04 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHhhhcccccccccchhh---HHHHHHHHHHHHhhhhc
Q 004482 180 LVAVVILVGLFSLQHYGTDRVGWLFAP---IVLLWFLLIGGIGMLNI 223 (750)
Q Consensus 180 ~is~~ILv~LF~iQ~~GT~kvg~~F~P---Im~vWf~~i~~~GiynI 223 (750)
.+++++++++..+.-+|+...+.+--. +.++-++.+.++|+..+
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~ 174 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAI 174 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666667777888898777654332 22333333344455433
No 32
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=35.35 E-value=27 Score=40.40 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=58.6
Q ss_pred HcCCCCceeEEecCCccCC----ceeechhHHHHHHHhheeEEeecCchhhHhhhhhhhHHHHHHHHHHHHHHHH-----
Q 004482 353 ALGCFPRVKVVHTSKKFLG----QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI----- 423 (750)
Q Consensus 353 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~----- 423 (750)
+.|-.||+-+...=++..| |+|+|.+= +..+-=|-.-=|-++-.+=-.+++|.|..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3788999999988888888 99999751 1111112222355556666889999999999988765221
Q ss_pred HHHhhhHHHHHHHHHHHHH-HHHH
Q 004482 424 LVWRCHWILVLIFTALSLV-VECT 446 (750)
Q Consensus 424 ~vW~~~~~~~~~~~~~F~~-ie~~ 446 (750)
+|.-.-+.+..+|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1222345666777777765 4443
No 33
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=35.33 E-value=1.3e+02 Score=34.08 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHhhhccccccccc
Q 004482 180 LVAVVILVGLFSLQHYGTDRVGW 202 (750)
Q Consensus 180 ~is~~ILv~LF~iQ~~GT~kvg~ 202 (750)
.+.+++++++..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 34566666777888888876655
No 34
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=34.66 E-value=4.3e+02 Score=30.26 Aligned_cols=45 Identities=9% Similarity=-0.205 Sum_probs=30.6
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCce
Q 004482 316 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 360 (750)
Q Consensus 316 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ 360 (750)
...++..+.+.+.+.++.+-+..+.+.++--+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 344555555555566666666667677777777777789999974
No 35
>PRK11387 S-methylmethionine transporter; Provisional
Probab=33.36 E-value=2.9e+02 Score=31.62 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=12.9
Q ss_pred HHHHHHHHHhhhccccccccc
Q 004482 182 AVVILVGLFSLQHYGTDRVGW 202 (750)
Q Consensus 182 s~~ILv~LF~iQ~~GT~kvg~ 202 (750)
.++++++++.+.-+|....+.
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344445666777788766553
No 36
>PRK10238 aromatic amino acid transporter; Provisional
Probab=31.85 E-value=2.3e+02 Score=32.42 Aligned_cols=114 Identities=22% Similarity=0.193 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHHhhhhccc--cCcc-eeeecCHHHHHHHHHhcCCcee-ee
Q 004482 181 VAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWK--YDSS-VLKAFSPVYIYRYFRRGGRDGW-TS 253 (750)
Q Consensus 181 is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~vWf~~i~~~GiynI~~--~~P~-Vl~AlnP~ya~~f~~~~g~~g~-~~ 253 (750)
.+++++++++.+.-+|+...+. .+.-+-++-++.+-++|+.-+.. .+|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888888766554 33333333333333334433222 1121 11110000 00001111121 12
Q ss_pred ecceEEeeccchh--hhccCCCCCCcceehhhhHhHhHHHHHhhcch
Q 004482 254 LGGIMLSITGTEA--LFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 298 (750)
Q Consensus 254 LG~vvL~iTG~EA--lyADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQ 298 (750)
++.++.+.+|-|. ..|.=-+-.+|.|-.|-.. +.-.+.+.|++=
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~~ 251 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIGS 251 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHH
Confidence 4456677888887 3444445666777776542 233444556543
No 37
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=29.46 E-value=9.1e+02 Score=27.68 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=17.8
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 004482 178 VVLVAVVILVGLFSLQHYGTDRVGW 202 (750)
Q Consensus 178 Vv~is~~ILv~LF~iQ~~GT~kvg~ 202 (750)
...++.++++++.++.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3456667777788888889766554
No 38
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=29.02 E-value=13 Score=37.94 Aligned_cols=68 Identities=25% Similarity=0.415 Sum_probs=50.2
Q ss_pred hHHHHHH-HHHhHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHH---HHhhccCCCcccccCCCCeEeeee
Q 004482 678 ETDELEF-LNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAF---LRKICRENSVIFNVPHESLLNVGQ 746 (750)
Q Consensus 678 v~eEl~~-L~~A~e~GVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~F---LRkNcR~~~~~L~IPh~~LlEVGM 746 (750)
..+|+.+ +++++++|+--++-.. .+.++=..+..|+-+||+|.- .+++.|.....+++|.++.+-||-
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 3445443 6677888876554432 566666788899999988765 367888899999999999999884
No 39
>PRK10580 proY putative proline-specific permease; Provisional
Probab=27.72 E-value=2.8e+02 Score=31.56 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=18.1
Q ss_pred CCCcHHHHHHHHHHHhhhhhhHhH
Q 004482 457 QGGWVPLVIAAAFLVIMYVWHYGT 480 (750)
Q Consensus 457 ~GGW~pl~la~~~~~iM~~W~~G~ 480 (750)
.+.++.+.++.+.+.+.+.+..-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778888888888888877653
No 40
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=27.55 E-value=2e+02 Score=30.29 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=32.2
Q ss_pred HHHHHHHhheeEEeecCchhhHhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 004482 379 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 425 (750)
Q Consensus 379 Nw~Lmi~~l~vv~~F~~s~~l~~AY--GiAV~~vM~iTT~L~~~v~~~v 425 (750)
|-..+.-.+.+.-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444555555566677777766 6788999999998888776654
No 41
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=26.74 E-value=44 Score=38.09 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=20.7
Q ss_pred eeeecceEEeeccchh--hhccCCCCCCcceehhhh
Q 004482 251 WTSLGGIMLSITGTEA--LFADLAHFPVSAIQIAFT 284 (750)
Q Consensus 251 ~~~LG~vvL~iTG~EA--lyADlGHFg~~~Ir~aw~ 284 (750)
|..+.-++.+.+|-|+ .+|+==.=-+|+|..|-.
T Consensus 203 ~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~ 238 (478)
T PF00324_consen 203 FAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATL 238 (478)
T ss_pred HHhhhhhhcccccccccccccccCCCchhhhhhHhh
Confidence 4455567788888883 455544555666655544
No 42
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=26.44 E-value=5.4e+02 Score=29.47 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=48.5
Q ss_pred cceEEeeccchhh--hccCCCCCCcceehhhhHhHhHHHHHhhcchhhhhc--cCCCc---ccCccccc----ccCcchH
Q 004482 255 GGIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLM--NHQDH---VVDAFYRS----IPDSIYW 323 (750)
Q Consensus 255 G~vvL~iTG~EAl--yADlGHFg~~~Ir~aw~~~v~P~L~L~Y~GQaA~ll--~~p~~---~~npFy~~----~P~~~~~ 323 (750)
..++.+.+|-|+. .|.==+-.+|.|-.|-. .+.-...+-|+-....+. ..+++ .++||-.. --++...
T Consensus 218 ~~~~~af~G~e~~~~~a~E~knP~r~iPrai~-~~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 296 (469)
T PRK11049 218 QIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS 296 (469)
T ss_pred HHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHH-HHHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHH
Confidence 3355667787764 33333455666666653 222233444444433222 12222 23565321 1122222
Q ss_pred HHHHHHHHHHHHHHhhhhhchhhHHHHHHHcCCCCce
Q 004482 324 PVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 360 (750)
Q Consensus 324 P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ 360 (750)
-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 297 ~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 297 VINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 2333333344444444444555555555678999963
No 43
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.21 E-value=22 Score=39.06 Aligned_cols=60 Identities=20% Similarity=0.416 Sum_probs=0.0
Q ss_pred HHHHHhh--hHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHH---HHHHHhhhhhhHhHHHHH
Q 004482 422 MILVWRC--HWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIA---AAFLVIMYVWHYGTVKRY 484 (750)
Q Consensus 422 ~~~vW~~--~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la---~~~~~iM~~W~~G~~~~~ 484 (750)
|.+.|+. ++|..+.|++.|+.-=.+...|.+. +=+||++++- .++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4455554 6788888888777655555555554 6789999865 456777788988765543
No 44
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=25.92 E-value=2.5e+02 Score=29.38 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=33.0
Q ss_pred HHHHHHHhheeEEeecCchhhHhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 004482 379 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 425 (750)
Q Consensus 379 Nw~Lmi~~l~vv~~F~~s~~l~~AY--GiAV~~vM~iTT~L~~~v~~~v 425 (750)
|-..+.-.+++.-...-|+++.||. |+||+.||.+++.+..++-..+
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444555555566677777776 6788999999999988877665
No 45
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=23.03 E-value=1.3e+02 Score=31.17 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=37.5
Q ss_pred hhHhHhHHHHHhhcchhhhh-ccCCCcccCcccccccCcchHHHHHHHHHHHHHHHhhhhhchhhHHHHHH
Q 004482 283 FTVVVFPCLLLAYSGQAAYL-MNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQAL 352 (750)
Q Consensus 283 w~~~v~P~L~L~Y~GQaA~l-l~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai 352 (750)
=+.+=+|||+++|+ +.+ +.||.+..| -.+-+--++.|+..-++-||+ +|.+|+.+..-+
T Consensus 90 s~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 90 SLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 34466799999996 333 568877665 234444455555555667777 677777666544
No 46
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=22.52 E-value=1.1e+02 Score=28.59 Aligned_cols=31 Identities=13% Similarity=0.309 Sum_probs=23.7
Q ss_pred CCceEEEEEecCCCCCEEEEEEEeecccCCC
Q 004482 556 EEERFLVKRIGPKNFHMFRCVARYGYKDLHK 586 (750)
Q Consensus 556 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~ 586 (750)
.+--+.|..+...+.|.|+|.+.+|.-|..+
T Consensus 72 ~~asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 72 SDATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred CCcEEEEeecccccCEEEEEEEecCCCCcee
Confidence 3444566677777889999999999887654
No 47
>PF02508 Rnf-Nqr: Rnf-Nqr subunit, membrane protein; InterPro: IPR003667 The rnf genes of Rhodobacter capsulatus, essential for nitrogen fixation, are thought to encode a system for electron transport to nitrogenase. The rnfABCDGEH operon comprises seven genes that show similarities in gene arrangement and deduced protein sequences to homologous regions in the genomes of Haemophilus influenzae and Escherichia coli. Four of the rnf gene products were found to be similar in sequence to components of an Na+-dependent NADH:ubiquinone oxidoreductase (NQR) from Vibrio alginolyticus []. The NQR-type enzyme of Klebsiella pneumoniae was shown to catalyse sodium-dependent NADH oxidation in the respiratory chain [].; GO: 0016020 membrane
Probab=21.37 E-value=3.5e+02 Score=28.03 Aligned_cols=87 Identities=21% Similarity=0.385 Sum_probs=47.6
Q ss_pred HHHHHHHhheeEEeecCchhhHhh--hhhhhHHHHHHHHHHHHHHHHHH---Hhh--hHHHHHHHHHHHHHHHHHH--HH
Q 004482 379 NWILMILCIAVTAGFKNQSQIGNA--YGTAVVIVMLATTLLMTLIMILV---WRC--HWILVLIFTALSLVVECTY--FS 449 (750)
Q Consensus 379 Nw~Lmi~~l~vv~~F~~s~~l~~A--YGiAV~~vM~iTT~L~~~v~~~v---W~~--~~~~~~~~~~~F~~ie~~f--~s 449 (750)
|-..+.-.+++.-...-|+++.|| -|+||+.+|++++.+..++-..+ .+. .+...+....+.-.+|... ++
T Consensus 15 ~N~vl~~~LGlcp~l~vs~~~~~a~~mGlav~~V~~~s~~~~~~l~~~il~p~~~lr~~~~ilviA~~v~~v~~~l~~~~ 94 (190)
T PF02508_consen 15 NNPVLVQFLGLCPFLAVSTSLENALGMGLAVTFVLTLSSVLISLLRNFILAPPSYLRIIVFILVIASLVQLVEMVLRAYF 94 (190)
T ss_pred hHHHHHHHHHhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 334444455555555556666665 46788899999999998887776 332 2222233333333444432 11
Q ss_pred hhhhcccCCCcHHHHHH
Q 004482 450 AVLFKVDQGGWVPLVIA 466 (750)
Q Consensus 450 a~l~Kv~~GGW~pl~la 466 (750)
=.++|- =|-|+||...
T Consensus 95 p~l~~~-LgiylpLi~~ 110 (190)
T PF02508_consen 95 PSLYKA-LGIYLPLITV 110 (190)
T ss_pred HHHHHH-HHHhhhHHHH
Confidence 122222 3677777654
No 48
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.78 E-value=84 Score=25.23 Aligned_cols=28 Identities=18% Similarity=0.557 Sum_probs=14.0
Q ss_pred HHHHhhhhhhHhHHHHHHHHHhcCCChH
Q 004482 468 AFLVIMYVWHYGTVKRYEFEMHSKVSMA 495 (750)
Q Consensus 468 ~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 495 (750)
+++...+.|.|-++++.++|....+|++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3333444455544445555555566654
No 49
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=20.33 E-value=6.3e+02 Score=28.47 Aligned_cols=135 Identities=21% Similarity=0.226 Sum_probs=84.6
Q ss_pred hhhchhhHHHHHHHcCC-CCceeEEecCCccCCceeechhHHHHHHHhheeEEeec-------CchhhHhhhhhhhHHHH
Q 004482 340 TISATFSIIKQALALGC-FPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFK-------NQSQIGNAYGTAVVIVM 411 (750)
Q Consensus 340 ~ISg~FSii~Qai~Lg~-fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~-------~s~~l~~AYGiAV~~vM 411 (750)
+||-+|.-+.|..-+=+ |||-| -+..|=.+.-+|+++..++-+..+ +.+....---.....-.
T Consensus 168 lis~~~l~l~qvqiv~rlF~R~~---------eK~~i~~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~i 238 (348)
T PF08733_consen 168 LISNFFLQLAQVQIVIRLFPRQK---------EKRIIFWVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFRI 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHhhcccC---------cEEEEeeHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHHH
Confidence 57788888888876544 59854 233466777777777665544433 22222222223344455
Q ss_pred HHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---HHHHHHHHHHHhhhhhhHhH
Q 004482 412 LATTLLMTLIMILVWRC--------HWILVLIFTALSLVVECTYFSAVLFKVDQGGW---VPLVIAAAFLVIMYVWHYGT 480 (750)
Q Consensus 412 ~iTT~L~~~v~~~vW~~--------~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW---~pl~la~~~~~iM~~W~~G~ 480 (750)
.+-++...++..++|.+ +.+...++.++...+..+||..-..+..-=|| ++-+..++..++-+=|-+-=
T Consensus 239 al~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i~l~~vffI~dis~~~v~~w~~~~~~~~~~~~tVivWEWi~ri 318 (348)
T PF08733_consen 239 ALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLILLPVVFFILDISNWWVSGWSEYFRWVLYVAATVIVWEWINRI 318 (348)
T ss_pred HHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHHHHHHHhheeEccchhhhhHHHHHHHHHHHHHhhhHHHhhhHH
Confidence 56667777777666654 34556666777778888898888888888888 56666666666655555443
Q ss_pred HHH
Q 004482 481 VKR 483 (750)
Q Consensus 481 ~~~ 483 (750)
+++
T Consensus 319 e~l 321 (348)
T PF08733_consen 319 ERL 321 (348)
T ss_pred HHH
Confidence 333
Done!