BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004485
(749 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YGP|A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site.
pdb|1YGP|B Chain B, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site
Length = 879
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/781 (46%), Positives = 496/781 (63%), Gaps = 47/781 (6%)
Query: 1 MEFLQGRTLTNAIGSLDIQNA-------------YADALNNLGHVLEEIAEQEKDXXXXX 47
+EFL GR L NA+ ++ I++ AL+ LG LE++ +QE D
Sbjct: 104 LEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGN 163
Query: 48 XXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVR 107
+CF+DSMAT +PAWGYGLRY YG+F QKI Q E + WL +PWE+ R
Sbjct: 164 GGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIER 223
Query: 108 HDVVFPVRFFGSVMVNPNGTR------KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDA 161
++V PV F+G V P G + +W+GGE V AVAYD P+PG+KT N +LRLW A
Sbjct: 224 NEVQIPVTFYGYVD-RPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQA 282
Query: 162 KASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQ 221
+ + E F+L +FN+G Y+++ RA+ I AVLYP D+ +GK LRLKQQ+F C+ASL
Sbjct: 283 RPTTE-FDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLH 341
Query: 222 DMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRT 281
D++ RFK KS R W+EFP +VA+QLNDTHPTLAI EL R+L+D E L W EAWDI T+T
Sbjct: 342 DILRRFK--KSKRPWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKT 399
Query: 282 VAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCIL 341
AYTNHTV+ EALEKW + + LLPRH+EII +I+ F+ V + + I+
Sbjct: 400 FAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDVDLLSRISII 459
Query: 342 DNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLW-PNKLQNKTNGITPR 400
+ N + +RMA L +V +H VNGV +LHS+++K +F D++ + P+K N TNGITPR
Sbjct: 460 EENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPR 519
Query: 401 RWLRFCNPELSKIITKWLK--TDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLA 458
RWL+ NP L+K+I++ L T++++ ++ L L ++ ++ E +W K+ +K L
Sbjct: 520 RWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLV 579
Query: 459 DYIWRVT-GVTID-----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEM-----SP 507
D I + GV I ++LFD+QVKRIHEYKRQ LN+ G IYRY +K M S
Sbjct: 580 DLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASI 639
Query: 508 QERKKTTPRTIMI-GGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVS 566
+E + PR + I GGK+ Y AK I+KL+N V ++VN D + LKVVFV +YNVS
Sbjct: 640 EEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVS 699
Query: 567 VAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626
AE++IP S+LS+HISTAG EASGTSNMKF +NG LIIGT+DGANVEI +EIGE+N FLF
Sbjct: 700 KAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLF 759
Query: 627 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFG---SYDYNPLLDSLEGNTGYGR 683
G ++E V +LR + + +I SG F ++ PL+DS++ +
Sbjct: 760 GNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH----- 814
Query: 684 GDYFLVGYDFPSYLEAQDRVDQAYKDQK-KWLKMSILSTAGSGKFSSDRTIAQYAKEIWN 742
GDY+LV DF SYL + VDQ + +Q+ +WLK S+LS A G FSSDR I +Y+ IWN
Sbjct: 815 GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWN 874
Query: 743 I 743
+
Sbjct: 875 V 875
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A
With Amp And Glucose
Length = 842
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/755 (47%), Positives = 475/755 (62%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 88 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 147
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI+ Q E A+DWL +PWE R + PV F+G V
Sbjct: 148 MATLGLAAYGYGIRYEFGIFNQKISGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGHV 207
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 208 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 265
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 266 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 325
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E + WD+AWD+T RT AYTNHTVLPEAL
Sbjct: 326 NFDAFPDKVAIQLNDTHPSLAIPELMRILVDLERMDWDKAWDVTVRTCAYTNHTVLPEAL 385
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 386 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 444
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 445 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEVI 504
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D ++++LD L L F D+ + K +K A Y+ R V I+PNSL
Sbjct: 505 AERIGED-FISDLDQLRKLLSFVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 563
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FDIQVKRIHEYKRQLLN L I Y ++K + K PRT+MIGGKA Y AK I
Sbjct: 564 FDIQVKRIHEYKRQLLNCLHVITLYNRIKR---EPNKFFVPRTVMIGGKAAPGYHMAKMI 620
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
++LV +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 621 IRLVTAIGDVVNHDPAVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 680
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
F LNG L IGT+DGANVE+ +E GEENFF+FG E V KL R + P
Sbjct: 681 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDKLDQRGYNAQEYYDRIPELR 740
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q++V YK+ ++
Sbjct: 741 QVIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEDYIKCQEKVSALYKNPRE 797
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 798 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Ligand
Length = 824
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/755 (46%), Positives = 477/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 196 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 253
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 432
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 492
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 493 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 608
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 728
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 729 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 785
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 786 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 820
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Thienopyrrole
Length = 825
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/755 (46%), Positives = 477/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 196 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 253
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 432
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 492
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 493 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 608
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 728
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 729 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 785
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 786 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 820
>pdb|2FFR|A Chain A, Crystallographic Studies On
N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of
Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D-
Glucopyranosylamine
Length = 825
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/755 (46%), Positives = 477/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 196 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 253
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPRVT 313
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 432
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 492
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 493 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 608
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 728
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 729 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 785
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 786 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 820
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|B Chain B, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|C Chain C, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|D Chain D, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|2AMV|A Chain A, The Structure Of Glycogen Phosphorylase B With An Alkyl-
Dihydropyridine-Dicarboxylic Acid
pdb|1E1Y|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1UZU|A Chain A, Glycogen Phosphorylase B In Complex With Indirubin-5'-
Sulphonate
pdb|1XC7|A Chain A, Binding Of Beta-D-Glucopyranosyl Bismethoxyphosphoramidate
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1XKX|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL0|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL1|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1Z62|A Chain A, Indirubin-3'-aminooxy-acetate Inhibits Glycogen
Phosphorylase By Binding At The Inhibitor And The
Allosteric Site. Broad Specificities Of The Two Sites
pdb|2F3P|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)oxamic Acid Complex
pdb|2F3Q|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
METHYL-N-(Beta-D- Glucopyranosyl)oxamate Complex
pdb|2F3S|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
ETHYL-N- (Beta-D-Glucopyranosyl)oxamate Complex
pdb|2F3U|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)-N'-Cyclopropyl Oxalamide
Complex
pdb|2FET|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|2FF5|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|1AXR|A Chain A, Cooperativity Between Hydrogen-Bonding And Charge-Dipole
Interactions In The Inhibition Of Beta-Glycosidases By
Azolopyridines: Evidence From A Study With Glycogen
Phosphorylase B
pdb|1GPY|A Chain A, Crystallographic Binding Studies On The Allosteric
Inhibitor Glucose- 6-Phosphate To T State Glycogen
Phosphorylase B
pdb|3BD7|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Thymine
pdb|3BD8|A Chain A, Glucogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cytosine
pdb|3BDA|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cyanuric Acid
Length = 842
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/756 (47%), Positives = 479/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug And Caffeine
pdb|1LWN|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|1LWO|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|3AMV|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
pdb|2GPA|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
Length = 842
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/756 (47%), Positives = 479/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
Length = 842
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/756 (47%), Positives = 479/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel
Allosteric Binding Site Of Glycogen Phosphorylase B
Length = 830
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/755 (46%), Positives = 477/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 75 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 134
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 135 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 194
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 195 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 252
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 253 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 312
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 313 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 372
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 373 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 431
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 432 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 491
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 492 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 550
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 551 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 607
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 608 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 667
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 668 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 727
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 728 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 784
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 785 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 819
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|B Chain B, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|C Chain C, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|D Chain D, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
Length = 828
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/755 (46%), Positives = 477/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 78 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 137
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 138 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 197
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 198 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 255
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 256 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 315
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 316 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 375
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 376 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 434
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 435 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 494
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 495 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 553
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 554 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 610
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 611 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 670
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 671 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 730
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 731 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 787
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 788 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 822
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|9GPB|A Chain A, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|B Chain B, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|C Chain C, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|D Chain D, The Allosteric Transition Of Glycogen Phosphorylase
pdb|1B4D|A Chain A, Amidocarbamate Inhibitor Of Glycogen Phosphorylase
pdb|1BX3|A Chain A, Effects Of Commonly Used Cryoprotectants On Glycogen
Phosphorylase Activity And Structure
pdb|2PRI|A Chain A, Binding Of 2-Deoxy-Glucose-6-Phosphate To Glycogen
Phosphorylase B
pdb|2PRJ|A Chain A, Binding Of N-Acetyl-Beta-D-Glucopyranosylamine To Glycogen
Phosphorylase B
pdb|2SKC|A Chain A, Pyridoxal Phosphorylase B In Complex With Fluorophosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKD|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKE|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphite,
Glucose And Inosine-5'-monophosphate
pdb|1C8K|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GFZ|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GG8|A Chain A, Design Of Inhibitors Of Glycogen Phosphorylase: A Study Of
Alpha-And Beta-C-Glucosides And 1-Thio-Beta-D-Glucose
Compounds
pdb|1FS4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTQ|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTW|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTY|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU7|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU8|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1GGN|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1HLF|A Chain A, Binding Of Glucopyranosylidene-Spiro-Thiohydantoin To
Glycogen Phosphorylase B: Kinetic And Crystallographic
Stud
pdb|1H5U|A Chain A, The 1.76 A Resolution Crystal Structure Of Glycogen
Phosphorylase B Complexed With Glucose And Cp320626, A
Potential Antidiabetic Drug
pdb|1K06|A Chain A, Crystallographic Binding Study Of 100 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1K08|A Chain A, Crystallographic Binding Study Of 10 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1KTI|A Chain A, Binding Of 100 Mm N-Acetyl-N'-Beta-D-Glucopyranosyl Urea
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1P29|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltopentaose
pdb|1P2B|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltoheptaose
pdb|1P2D|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Beta Cyclodextrin
pdb|1P2G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Gamma Cyclodextrin
pdb|1P4G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Azido-Alpha-D-Glucopyranosyl)formamide
pdb|1P4H|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Acetamido-alpha-d-glucopyranosyl) Formamide
pdb|1P4J|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Hydroxy-Beta-D-Glucopyranosyl)formamide
pdb|1WUT|A Chain A, Acyl Ureas As Human Liver Glycogen Phosphorylase
Inhibitors For The Treatment Of Type 2 Diabetes
pdb|1WUY|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV0|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV1|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogenphosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WW2|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|1WW3|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|2IEG|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEG|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|1GPB|A Chain A, Glycogen Phosphorylase B: Description Of The Protein
Structure
pdb|2GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|3GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|4GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|5GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|6GPB|A Chain A, Refined Crystal Structure Of The Phosphorylase-Heptulose
2-Phosphate- Oligosaccharide-Amp Complex
pdb|8GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|2QN7|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Hydroxybenzoyl-N'-4-Beta- D-Glucopyranosyl Urea
pdb|2QN8|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-nitrobenzoyl-n'-beta-d- Glucopyranosyl Urea
pdb|2QN9|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Aminobenzoyl-N'-Beta-D- Glucopyranosyl Urea
Length = 842
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/756 (47%), Positives = 479/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10
pdb|4EKE|A Chain A, Crystal Structure Of Gpb In Complex With Dk11
pdb|4EKY|A Chain A, Crystal Structure Of Gpb In Complex With Dk15
pdb|4EL0|A Chain A, Crystal Structure Of Gpb In Complex With Dk16
pdb|4EL5|A Chain A, Crystal Structure Of Gpb In Complex With Dk12
Length = 825
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/755 (46%), Positives = 476/755 (63%), Gaps = 18/755 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 196 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 253
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 432
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 492
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 493 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 608
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFE 652
F LNG L IGT+DGANVE+ +E GEENFF+FG E V +L R + P
Sbjct: 669 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELR 728
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
+ + + SG F + D + + R F V D+ Y++ Q+RV YK+ ++
Sbjct: 729 QIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPRE 785
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 786 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 820
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone
Derivatives To Glycogen Phosphorylase: A New Class Of
Inhibitors
Length = 841
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/756 (47%), Positives = 478/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 86 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 145
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 146 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 205
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 206 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 263
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 264 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 323
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 324 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 383
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 384 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 442
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 443 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 502
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 503 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 561
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 562 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 618
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 619 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 678
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
F LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 679 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 737
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 738 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 794
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 795 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 830
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab
Complex
pdb|2G9R|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol
pdb|2G9U|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol And Phosphate
pdb|2G9V|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r, 4r,5r)-5-Hydroxymethylpiperidine-3,4-Diol And
Phosphate
pdb|2OFF|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With A Potent Allosteric Inhibitor
pdb|2QN1|A Chain A, Glycogen Phosphorylase B In Complex With Asiatic Acid
pdb|2QN2|A Chain A, Glycogen Phosphorylase B In Complex With Maslinic Acid
pdb|2QLM|A Chain A, Glycogen Phosphorylase In Complex With Fn67
pdb|2QLN|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Phenylbenzoyl- N'-Beta-D-Glucopyranosyl Urea
pdb|2QN3|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Chlorobenzoyl-N- Beta-D-Glucopyranosyl Urea
pdb|2QNB|A Chain A, Glycogen Phosphorylase B In Complex With
N-Benzoyl-N'-Beta- D-Glucopyranosyl Urea
pdb|2QRM|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Nitrophenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,
5'-Isoxazoline]
pdb|2QRP|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(2-
Naphthyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|2QRQ|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methylphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRG|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methoxyphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRH|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-
Phenylspiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|3BCR|A Chain A, Glycogen Phosphorylase B In Complex With Azt
pdb|3BCS|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Uracil
pdb|3BCU|A Chain A, Glucogen Phosphorylase Complex With Thymidine
pdb|3BD6|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Ribofuranosyl)
Cyanuric Acid
pdb|3E3L|A Chain A, The R-state Glycogen Phosphorylase
pdb|3E3L|B Chain B, The R-state Glycogen Phosphorylase
pdb|3E3L|C Chain C, The R-state Glycogen Phosphorylase
pdb|3E3L|D Chain D, The R-state Glycogen Phosphorylase
pdb|3CUT|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamide
pdb|3CUU|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3CUV|A Chain A, Tracking Structure Activity Relationships Of Glycogen
Phosphorylase Inhibitors: Synthesis, Kinetic And
Crystallographic Evaluation Of Analogues Of N-(-D-
Glucopyranosyl)-N'-Oxamides
pdb|3CUW|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3E3N|A Chain A, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|B Chain B, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|C Chain C, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|D Chain D, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|E Chain E, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|F Chain F, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|G Chain G, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|H Chain H, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3EBO|A Chain A, Glycogen Phosphorylase B/chrysin Complex
pdb|3EBP|A Chain A, Glycogen Phosphorylase B/flavopiridol Complex
pdb|3G2H|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2I|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2J|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2K|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2L|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2N|A Chain A, Crystal Structure Of N-Acylglucosylamine With Glycogen
Phosphorylase
pdb|3MQF|A Chain A, Glycogen Phosphorylase Complexed With
4-Fluorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MRT|A Chain A, Glycogen Phosphorylase Complexed With
4-Pyridinecarboxaldehyde-4- (Beta-D-Glucopyranosyl)
Thiosemicarbazone
pdb|3MRV|A Chain A, Glycogen Phosphorylase Complexed With
3-Hydroxybenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MRX|A Chain A, Glycogen Phosphorylase Complexed With
4-Methoxybenzaldehyde-4-(2,3,4,
6-Tetra-O-Acetyl-Beta-D-Glucopyranosyl)-
Thiosemicarbazone
pdb|3MS2|A Chain A, Glycogen Phosphorylase Complexed With
4-Methylbenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MS4|A Chain A, Glycogen Phosphorylase Complexed With
4-Trifluoromethylbenzaldehyde-4-
(Beta-D-Glucopyranosyl)-Thiosemicarbazone
pdb|3MS7|A Chain A, Glycogen Phosphorylase Complexed With
2-Chlorobenzaldehyde-4-(2,3,4,6-
Tetra-O-Acetyl-Beta-D-Glucopyranosyl) Thiosemicarbazone
pdb|3MT7|A Chain A, Glycogen Phosphorylase Complexed With
4-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT8|A Chain A, Glycogen Phosphorylase Complexed With
4-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT9|A Chain A, Glycogen Phosphorylase Complexed With
4-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTA|A Chain A, Glycogen Phosphorylase Complexed With
3-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTB|A Chain A, Glycogen Phosphorylase Complexed With
3-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTD|A Chain A, Glycogen Phosphorylase Complexed With
4-Hydroxybenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MSC|A Chain A, Glycogen Phosphorylase Complexed With
2-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3NP7|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-3-(Beta-D- Glucopyranosyl)-Chlorobenzene
And 2,5-Dihydroxy-4-(Beta-D-
Glucopyranosyl)-Chlorobenzene
pdb|3NP9|A Chain A, Glycogen Phosphorylase Complexed With
3-(Beta-D-Glucopyranosyl)-2-
Hydroxy-5-Methoxy-Chlorobenzene
pdb|3NPA|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-4-(Beta-D- Glucopyranosyl)-Bromo-Benzene
pdb|3S0J|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With 2,5-
Dihydroxy-4-(Beta-D-Glucopyranosyl)-Chlorobenzene
pdb|3SYM|A Chain A, Glycogen Phosphorylase B In Complex With 3
-C-(Hydroxymethyl)-Beta-D- Glucopyranonucleoside Of
5-Fluorouracil
pdb|3SYR|A Chain A, Glycogen Phosphorylase B In Complex With
Beta-D-Glucopyranonucleoside 5-Fluorouracil
pdb|3T3D|A Chain A, Glycogen Phosphorylase B In Complex With Glcu
pdb|3T3E|A Chain A, Glycogen Phosphorylase B In Complex With Glcclu
pdb|3T3G|A Chain A, Glycogen Phosphorylase B In Complex With Glcbru
pdb|3T3H|A Chain A, Glycogen Phosphorylase B In Complex With Glciu
pdb|3T3I|A Chain A, Glycogen Phosphorylase B In Complex With Glccf3u
Length = 842
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/756 (47%), Positives = 478/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
F LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucose At 100 K
pdb|2PYI|A Chain A, Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucosyl Triazoleacetamide
pdb|3L79|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk1 Complex
pdb|3L7A|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk2 Complex
pdb|3L7B|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk3 Complex
pdb|3L7C|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk4 Complex
pdb|3L7D|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk5 Complex
Length = 843
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/756 (47%), Positives = 478/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 88 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 147
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 148 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 207
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 208 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 265
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 266 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 325
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTVLPEAL
Sbjct: 326 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 385
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 386 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 444
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 445 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 504
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 505 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 563
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 564 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 620
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 621 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 680
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
F LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 681 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 739
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 740 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 796
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 797 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex
pdb|1Z6Q|A Chain A, Glycogen Phosphorylase With Inhibitor In The Amp Site
pdb|1A8I|A Chain A, Spirohydantoin Inhibitor Of Glycogen Phosphorylase
pdb|2GPN|A Chain A, 100 K Structure Of Glycogen Phosphorylase At 2.0 Angstroms
Resolution
pdb|3E3O|A Chain A, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|B Chain B, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|C Chain C, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|D Chain D, Glycogen Phosphorylase R State-Imp Complex
Length = 842
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/756 (46%), Positives = 478/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
F LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 XFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|B Chain B, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|C Chain C, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|D Chain D, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOJ|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
pdb|1NOK|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
Length = 842
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/756 (46%), Positives = 478/756 (63%), Gaps = 20/756 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L ++NA +A LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY +G+F QKI Q E A+DWL +PWE R + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
G KWV +VV A+ YD P+PGY+ ++RLW AKA DFNL FN G Y
Sbjct: 207 EHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-NDFNLKDFNVGGYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------R 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T +T AYTNHTV+PEAL
Sbjct: 325 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ LLPRH++II EI++RF+ V + ++ M +++ K + MA+
Sbjct: 385 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+ +H VNGVA++HS+ILK +F D+ L P+K QNKTNGITPRRWL CNP L++II
Sbjct: 444 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEII 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + ++++++LD L L + D+ + K +K A Y+ R V I+PNSL
Sbjct: 504 AERI-GEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ + K PRT+MIGGK Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVMIGGKPAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ +G+VVN DP V L+V+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEA 654
KF LNG L IGT+DGANVE+ +E GEENFF+FG E V +L + + D R E
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD-RIPEL 738
Query: 655 KQFIR---SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 711
+Q I SG F + D + + R F V D+ Y++ Q+RV YK+ +
Sbjct: 739 RQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPR 795
Query: 712 KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 747
+W +M I + A SGKFSSDRTIAQYA+EIW + R
Sbjct: 796 EWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 831
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EM6|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EXV|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1EXV|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1L5Q|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5Q|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5R|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5R|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5S|A Chain A, Human Liver Glycogen Phosphorylase Complexed With Uric
Acid, N-Acetyl- Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L5S|B Chain B, Human Liver Glycogen Phosphorylase Complexed With Uric
Acid, N-Acetyl- Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L7X|A Chain A, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L7X|B Chain B, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
Length = 847
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 88 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 147
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 148 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 207
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 208 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 265
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 266 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 325
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 326 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 385
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 386 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 444
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 445 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 504
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 505 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 563
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 564 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 620
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 621 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 680
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 681 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 740
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 741 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 797
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 798 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 828
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex
Length = 847
Score = 631 bits (1628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 88 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 147
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 148 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 207
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 208 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 265
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 266 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 325
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 326 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 385
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 386 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 444
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 445 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 504
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 505 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 563
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 564 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 620
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 621 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 680
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 681 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 740
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 741 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 797
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 798 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 828
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
pdb|2ZB2|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
Length = 849
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 90 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 149
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 150 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 209
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 210 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 267
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 268 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 327
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 328 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 387
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 388 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 446
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 447 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 506
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 507 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 565
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 566 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 622
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 623 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 682
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 683 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 742
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 743 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 799
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 800 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 830
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEH|B Chain B, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEJ|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEJ|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEM|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
pdb|3CEM|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
Length = 809
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 65 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 124
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 125 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 184
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 185 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 242
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 243 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 302
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 303 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 362
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 363 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 421
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 422 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 481
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 482 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 540
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 541 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 597
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 598 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 657
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 658 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 717
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 718 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 774
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 775 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 805
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|1FC0|B Chain B, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|2ATI|A Chain A, Glycogen Phosphorylase Inhibitors
pdb|2ATI|B Chain B, Glycogen Phosphorylase Inhibitors
Length = 846
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 207 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 325 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 385 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 444 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 504 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 739
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 740 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 796
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 797 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 827
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDS|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDW|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DDW|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DD1|A Chain A, Crystal Structure Of Glycogen Phophorylase Complexed With
An Anthranilimide Based Inhibitor Gsk254
pdb|3DD1|B Chain B, Crystal Structure Of Glycogen Phophorylase Complexed With
An Anthranilimide Based Inhibitor Gsk254
Length = 848
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 89 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 148
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 149 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 208
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 209 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 266
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 267 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 326
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 327 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 386
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 387 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 445
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 446 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 505
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 506 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 564
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 565 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 621
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 622 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 681
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 682 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 741
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 742 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 798
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 799 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 829
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp
Length = 846
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 470/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 207 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKE------RKSGR 234
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK R +G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 324
Query: 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 325 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 385 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 444 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 504 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 739
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 740 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 796
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 797 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 827
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
pdb|1XOI|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
Length = 846
Score = 630 bits (1625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/751 (45%), Positives = 469/751 (62%), Gaps = 18/751 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
+EF GRTL N + +L +QNA +A+ LG +EE+ E E+D +CFLDS
Sbjct: 87 LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 146
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MATL L A+GYG+RY YG+F QKI Q E A+DWL +PWE R + + PV F+G V
Sbjct: 147 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 206
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
GT KW+ +VV A+ YD P+PGY ++RLW A+A DFNL FN G Y
Sbjct: 207 EHTNTGT-KWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAP-NDFNLRDFNVGDYIQ 264
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQ----- 235
A + A+ I VLYP D+ EGK LRLKQ++F+ +A+LQD+I RFK K G
Sbjct: 265 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAAT 324
Query: 236 -WSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 294
+ FP +VA+QLNDTHP LAIPELMR+ +D E L W +AW++T +T AYTNHTVLPEAL
Sbjct: 325 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 384
Query: 295 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 354
E+W ++ KLLPRH+EII EI+++ + + + ++ M +++ K + MA+
Sbjct: 385 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRI-NMAH 443
Query: 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 414
LC+V +H VNGVA++HSDI+K +F D+ L P+K QNKTNGITPRRWL CNP L+++I
Sbjct: 444 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 503
Query: 415 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474
+ + D +V +L L L F + E K +K + ++ V I+P+S+
Sbjct: 504 AEKIGED-YVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSM 562
Query: 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 534
FD+QVKRIHEYKRQLLN L I Y ++K+ +K PRT++IGGKA Y AK I
Sbjct: 563 FDVQVKRIHEYKRQLLNCLHVITMYNRIKK---DPKKLFVPRTVIIGGKAAPGYHMAKMI 619
Query: 535 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594
+KL+ V +VVN DP V S LKV+F+ NY VS+AE +IP ++LS+ ISTAG EASGT NM
Sbjct: 620 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 679
Query: 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFE 652
KF LNG L IGT+DGANVE+ +E GEEN F+FG + V L K+ + ++ P +
Sbjct: 680 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 739
Query: 653 EAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712
I +G F + D + + R F V D+ +Y++ QD+V Q Y + K
Sbjct: 740 LVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKA 796
Query: 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743
W M + + A SGKFSSDRTI +YA+ IWN+
Sbjct: 797 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 827
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5V|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5W|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L5W|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L6I|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|1L6I|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|2ASV|A Chain A, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2ASV|B Chain B, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2AV6|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AV6|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AZD|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
pdb|2AZD|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
Length = 796
Score = 598 bits (1541), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/743 (43%), Positives = 449/743 (60%), Gaps = 18/743 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
MEFL GR N + +L D+L L ++ E+E D +CFLDS
Sbjct: 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDS 125
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MAT+ A GYGL Y+YGLF+Q Q E +DW PW RH+ V+
Sbjct: 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPW--FRHNEALDVQVGIGG 183
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
V +G +W + A+D+P+ GY+ LRLW A A F+L +FNDG +
Sbjct: 184 KVTKDG--RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLTKFNDGDFLR 240
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240
A Q A+++ VLYP D+ EGK LRL QQ+F C+ S+ D++ R +GR+ E
Sbjct: 241 AEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRR--HHLAGRKLHELA 298
Query: 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 300
+QLNDTHPT+AIPEL+R+L+DE + WD+AW IT++T AYTNHT++PEALE+W
Sbjct: 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVK 358
Query: 301 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 360
++ LLPRHM+II EI+ RF +V T E + ++ + V MANLCVV
Sbjct: 359 LVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQ----VHMANLCVVGG 414
Query: 361 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 420
VNGVA LHSD++ DLF +Y LWPNK N TNGITPRRW++ CNP L+ ++ K L+
Sbjct: 415 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK 474
Query: 421 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480
+W +LD L+ L +FAD+ + + ++ K A+K LA+++ TG+ I+P ++FDIQ+K
Sbjct: 475 -EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIK 533
Query: 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540
R+HEYKRQ LN+L + YK+++E +PQ + PR + G KA Y AK I+ +N
Sbjct: 534 RLHEYKRQHLNLLHILALYKEIRE-NPQADR--VPRVFLFGAKAAPGYYLAKNIIFAINK 590
Query: 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600
V +V+N DP V LKVVF+P+Y VS AE LIP +++S+ ISTAG EASGT NMK +LNG
Sbjct: 591 VADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650
Query: 601 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL--FKPDPRFEEAKQFI 658
L +GTLDGANVEI +++GEEN F+FG EQV + + D + K D + + +
Sbjct: 651 ALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKEL 710
Query: 659 RSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSI 718
SG + D + D + + G GD +LV DF +Y+EAQ +VD Y+DQ+ W + +I
Sbjct: 711 ESGKYSDGDKHA-FDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAI 769
Query: 719 LSTAGSGKFSSDRTIAQYAKEIW 741
L+TA G FSSDR+I Y IW
Sbjct: 770 LNTARCGMFSSDRSIRDYQARIW 792
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1QM5|B Chain B, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|A Chain A, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|B Chain B, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
Length = 796
Score = 595 bits (1535), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/743 (43%), Positives = 448/743 (60%), Gaps = 18/743 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
MEFL GR N + +L D+L L ++ E+E D +CFLDS
Sbjct: 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDS 125
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MAT+ A GYGL Y+YGLF+Q Q E +DW PW RH+ V+
Sbjct: 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPW--FRHNEALDVQVGIGG 183
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
V +G +W + A+D+P+ GY+ LRLW A A F+L +FNDG +
Sbjct: 184 KVTKDG--RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLTKFNDGDFLR 240
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240
A Q A+++ VLYP D+ GK LRL QQ+F C+ S+ D++ R +GR+ E
Sbjct: 241 AEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRR--HHLAGRKLHELA 298
Query: 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 300
+QLNDTHPT+AIPEL+R+L+DE + WD+AW IT++T AYTNHT++PEALE+W
Sbjct: 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVK 358
Query: 301 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 360
++ LLPRHM+II EI+ RF +V T E + ++ + V MANLCVV
Sbjct: 359 LVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQ----VHMANLCVVGG 414
Query: 361 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 420
VNGVA LHSD++ DLF +Y LWPNK N TNGITPRRW++ CNP L+ ++ K L+
Sbjct: 415 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK 474
Query: 421 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480
+W +LD L+ L +FAD+ + + ++ K A+K LA+++ TG+ I+P ++FDIQ+K
Sbjct: 475 -EWANDLDQLINLEKFADDAKFRDQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIK 533
Query: 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540
R+HEYKRQ LN+L + YK+++E +PQ + PR + G KA Y AK I+ +N
Sbjct: 534 RLHEYKRQHLNLLHILALYKEIRE-NPQADR--VPRVFLFGAKAAPGYYLAKNIIFAINK 590
Query: 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600
V +V+N DP V LKVVF+P+Y VS AE LIP +++S+ ISTAG EASGT NMK +LNG
Sbjct: 591 VADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650
Query: 601 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL--FKPDPRFEEAKQFI 658
L +GTLDGANVEI +++GEEN F+FG EQV + + D + K D + + +
Sbjct: 651 ALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKEL 710
Query: 659 RSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSI 718
SG + D + D + + G GD +LV DF +Y+EAQ +VD Y+DQ+ W + +I
Sbjct: 711 ESGKYSDGDKHA-FDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAI 769
Query: 719 LSTAGSGKFSSDRTIAQYAKEIW 741
L+TA G FSSDR+I Y IW
Sbjct: 770 LNTARCGMFSSDRSIRDYQARIW 792
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
pdb|1AHP|B Chain B, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
Length = 797
Score = 588 bits (1517), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/743 (42%), Positives = 446/743 (60%), Gaps = 18/743 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
MEFL GR N + +L D+L L ++ E+E D +CFLDS
Sbjct: 67 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGAGGLGRLAACFLDS 126
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MAT+ A GYGL Y+YGLF+Q Q E +DW PW RH+ V+
Sbjct: 127 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPW--FRHNEALDVQVGIGG 184
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
V +G +W + A+D+P+ GY+ LRLW A A F+L +FNDG +
Sbjct: 185 AVTKDG--RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLTKFNDGDFLR 241
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240
A Q A+++ VLYP D+ GK LRL QQ+F C+ S+ D++ R +GR+ E
Sbjct: 242 AEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRR--HHLAGRELHELA 299
Query: 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 300
+QLNDTHPT+AIPEL+R+L+DE + WD+AW IT++T AYTNHT++PEALE+W
Sbjct: 300 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVK 359
Query: 301 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 360
++ LLPRHM+II EI+ RF +V T E + ++ + V MANLCVV
Sbjct: 360 LVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQ----VHMANLCVVGG 415
Query: 361 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 420
VNGVA LHSD++ DLF +Y LWPNK N TNGITPRRW++ CNP L+ ++ K L+
Sbjct: 416 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK 475
Query: 421 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480
+W +LD L+ L + AD+ + + + K A+K LA+++ TG+ I+P ++FDIQ+K
Sbjct: 476 -EWANDLDQLINLVKLADDAKFRDLYRVIKQANKVRLAEFVKVRTGIDINPQAIFDIQIK 534
Query: 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540
R+HEYKRQ LN+L + YK+++E +PQ + PR + G KA Y AK I+ +N
Sbjct: 535 RLHEYKRQHLNLLRILALYKEIRE-NPQADR--VPRVFLFGAKAAPGYYLAKNIIFAINK 591
Query: 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600
V +V+N DP V LKVVF+P+Y VS AE LIP +++S+ ISTAG EASGT NMK +LNG
Sbjct: 592 VADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 651
Query: 601 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL--FKPDPRFEEAKQFI 658
L +GTLDGANVEI +++GEEN F+FG +QV + + D + K D + + +
Sbjct: 652 ALTVGTLDGANVEIAEKVGEENIFIFGHTVKQVKAILAKGYDPVKWRKKDKVLDAVLKEL 711
Query: 659 RSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSI 718
SG + D + D + + G GD +LV DF +Y+EAQ +VD Y+DQ+ W + +I
Sbjct: 712 ESGKYSDGDKHA-FDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAI 770
Query: 719 LSTAGSGKFSSDRTIAQYAKEIW 741
L+TA G FSSDR+I Y IW
Sbjct: 771 LNTARCGMFSSDRSIRDYQARIW 793
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
pdb|2ECP|B Chain B, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
Length = 796
Score = 588 bits (1516), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/743 (42%), Positives = 446/743 (60%), Gaps = 18/743 (2%)
Query: 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDS 60
MEFL GR N + +L D+L L ++ E+E D +CFLDS
Sbjct: 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDS 125
Query: 61 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 120
MAT+ A GYGL Y+YGLF+Q Q E +DW PW RH+ V+
Sbjct: 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPW--FRHNEALDVQVGIGG 183
Query: 121 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYES 180
V +G +W + A+D+P+ GY+ LRLW A A F+L +FNDG +
Sbjct: 184 AVTKDG--RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLTKFNDGDFLR 240
Query: 181 AAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240
A Q A+++ VLYP D+ GK LRL QQ+F C+ S+ D++ R +GR+ E
Sbjct: 241 AEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRR--HHLAGRELHELA 298
Query: 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 300
+QLNDTHPT+AIPEL+R+L+DE + WD+AW IT++T AYTNHT++PEALE+W
Sbjct: 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVK 358
Query: 301 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 360
++ LLPRHM+II EI+ RF +V T E + ++ + V MANLCVV
Sbjct: 359 LVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQ----VHMANLCVVGG 414
Query: 361 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 420
VNGVA LHSD++ DLF +Y LWPNK N TNGITPRRW++ CNP L+ ++ K L+
Sbjct: 415 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK 474
Query: 421 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480
+W +LD L+ L + AD+ + + + K A+K LA+++ TG+ I+P ++FDIQ+K
Sbjct: 475 -EWANDLDQLINLVKLADDAKFRDLYRVIKQANKVRLAEFVKVRTGIDINPQAIFDIQIK 533
Query: 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540
R+HEYKRQ LN+L + YK+++E +PQ + PR + G KA Y AK I+ +N
Sbjct: 534 RLHEYKRQHLNLLRILALYKEIRE-NPQADR--VPRVFLFGAKAAPGYYLAKNIIFAINK 590
Query: 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600
V +V+N DP V LKVVF+P+Y VS AE LIP +++S+ ISTAG EASGT NMK +LNG
Sbjct: 591 VADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650
Query: 601 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL--FKPDPRFEEAKQFI 658
L +GTLDGANVEI +++GEEN F+FG +QV + + D + K D + + +
Sbjct: 651 ALTVGTLDGANVEIAEKVGEENIFIFGHTVKQVKAILAKGYDPVKWRKKDKVLDAVLKEL 710
Query: 659 RSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSI 718
SG + D + D + + G GD +LV DF +Y+EAQ +VD Y+DQ+ W + +I
Sbjct: 711 ESGKYSDGDKHA-FDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAI 769
Query: 719 LSTAGSGKFSSDRTIAQYAKEIW 741
L+TA G FSSDR+I Y IW
Sbjct: 770 LNTARCGMFSSDRSIRDYQARIW 792
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|B Chain B, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|C Chain C, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|D Chain D, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control
Length = 796
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/748 (43%), Positives = 443/748 (59%), Gaps = 33/748 (4%)
Query: 2 EFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSM 61
EFL GR L N + +L + + A A LGH L +I E E D +CFLDS
Sbjct: 68 EFLMGRALLNNLTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSA 127
Query: 62 ATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVM 121
T + P GYGL YR+GLF+Q + Q E + W E+ P+ + R V F
Sbjct: 128 VTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCF----- 182
Query: 122 VNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESA 181
+ TR A+ YD+PI GY T N +LRLW A+ E+F+ FN ++ A
Sbjct: 183 -DDMKTR---------AIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNAQRFTDA 231
Query: 182 AQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMIL-RFKERKSGRQWSEFP 240
R IC VLYP D+T EGK LR++QQ+F SASLQ MI K ++EF
Sbjct: 232 IIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHKDLSNFAEFH 291
Query: 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 300
S VQLNDTHP LAIPELMRLLMDE +GW+E+W I ++T AYTNHTVL EALE+W +
Sbjct: 292 S---VQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQ 348
Query: 301 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 360
+ +L R EII EID+RF + R+ E I M + + V MA + +A
Sbjct: 349 IFQQLFWRVWEIIAEIDRRF-RLERAADGLDEETINRMAPIQHG----TVHMAWIACYAA 403
Query: 361 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 420
+++NGVA LH++I+KA+ AD+ +LWP K NKTNG+TPRRWLR NP LS ++T+ +
Sbjct: 404 YSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGS 463
Query: 421 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480
D WVT+LD L LR +AD+ + E + K A+K+ A++I G+ IDP S+FD+Q+K
Sbjct: 464 DDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIK 523
Query: 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540
R+HEYKRQL+N L + Y ++KE + RT++ G KA Y AK I+KL+N
Sbjct: 524 RLHEYKRQLMNALYVLDLYFRIKEDGLTD---IPARTVIFGAKAAPGYVRAKAIIKLINS 580
Query: 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600
+ ++VN DPEV+ LKVVFV NYNVS AE ++P S++S+ ISTAG EASGTSNMKF +NG
Sbjct: 581 IADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNG 640
Query: 601 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE-REDGLFKPDPRFEEAKQFIR 659
L +GT+DGANVEI +GEEN ++FGA E++P LR+ + L++ P + A +
Sbjct: 641 ALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVPGLKRALDALD 700
Query: 660 SGAFGSYDYNPLLD---SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY-KDQKKWLK 715
+G + D SL G D + V DF Y E +DR+ Y D W +
Sbjct: 701 NGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADYASDPLGWAR 760
Query: 716 MSILSTAGSGKFSSDRTIAQYAKEIWNI 743
M+ ++ SG+FSSDRTI YA EIW +
Sbjct: 761 MAWINICESGRFSSDRTIRDYATEIWKL 788
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,794,725
Number of Sequences: 62578
Number of extensions: 974535
Number of successful extensions: 2388
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2146
Number of HSP's gapped (non-prelim): 37
length of query: 749
length of database: 14,973,337
effective HSP length: 106
effective length of query: 643
effective length of database: 8,340,069
effective search space: 5362664367
effective search space used: 5362664367
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)