Query 004485
Match_columns 749
No_of_seqs 203 out of 1400
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 00:11:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004485.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004485hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 2E-217 4E-222 1747.7 45.7 736 1-749 88-835 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 3E-215 7E-220 1839.6 64.5 728 1-743 57-794 (794)
3 PRK14985 maltodextrin phosphor 100.0 5E-215 1E-219 1835.0 63.8 726 1-744 66-797 (798)
4 cd04300 GT1_Glycogen_Phosphory 100.0 1E-213 3E-218 1833.4 66.5 728 1-743 60-797 (797)
5 PRK14986 glycogen phosphorylas 100.0 2E-212 5E-217 1819.7 66.0 731 1-748 77-815 (815)
6 PF00343 Phosphorylase: Carboh 100.0 2E-207 5E-212 1758.9 51.2 705 25-745 1-713 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 1E-173 3E-178 1481.5 46.9 675 1-745 69-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 6E-133 1E-137 1169.5 46.6 569 31-742 91-689 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 2E-130 4E-135 1131.1 45.3 568 31-742 4-600 (601)
10 COG0297 GlgA Glycogen synthase 100.0 4.6E-57 9.9E-62 507.6 22.2 382 168-739 83-474 (487)
11 PLN02939 transferase, transfer 100.0 3.6E-52 7.8E-57 489.9 28.6 463 40-741 490-964 (977)
12 PRK14098 glycogen synthase; Pr 100.0 9.3E-50 2E-54 453.7 29.2 456 40-741 14-483 (489)
13 PRK14099 glycogen synthase; Pr 100.0 2.7E-47 5.9E-52 433.1 25.2 452 40-741 12-476 (485)
14 TIGR02095 glgA glycogen/starch 100.0 5.8E-45 1.3E-49 411.4 28.4 454 40-739 9-469 (473)
15 PRK00654 glgA glycogen synthas 100.0 1.6E-44 3.4E-49 408.1 28.1 444 40-738 9-458 (466)
16 cd03791 GT1_Glycogen_synthase_ 100.0 7.8E-44 1.7E-48 400.7 30.0 462 40-740 8-474 (476)
17 PLN02316 synthase/transferase 100.0 1.6E-42 3.5E-47 414.5 26.4 430 40-739 596-1030(1036)
18 PF08323 Glyco_transf_5: Starc 99.9 1.9E-24 4.1E-29 225.9 5.8 227 40-386 8-243 (245)
19 TIGR02470 sucr_synth sucrose s 99.8 1.1E-17 2.5E-22 197.7 22.1 341 240-739 384-744 (784)
20 cd03793 GT1_Glycogen_synthase_ 99.8 1.3E-16 2.8E-21 182.2 24.9 209 349-609 216-507 (590)
21 PLN00142 sucrose synthase 99.7 9.2E-16 2E-20 181.8 25.6 194 464-740 564-768 (815)
22 TIGR02472 sucr_P_syn_N sucrose 99.6 5.3E-14 1.2E-18 158.4 23.9 255 351-740 176-438 (439)
23 TIGR02468 sucrsPsyn_pln sucros 99.6 2.3E-14 5E-19 173.2 20.2 334 242-743 311-671 (1050)
24 TIGR02149 glgA_Coryne glycogen 99.6 7.8E-14 1.7E-18 152.0 21.5 244 353-739 138-383 (388)
25 TIGR03449 mycothiol_MshA UDP-N 99.5 1.8E-12 3.9E-17 142.9 23.6 242 355-742 159-401 (405)
26 cd03796 GT1_PIG-A_like This fa 99.4 7.1E-12 1.5E-16 138.8 19.5 119 471-616 191-309 (398)
27 cd03813 GT1_like_3 This family 99.4 2.1E-11 4.5E-16 139.0 21.0 235 351-738 236-472 (475)
28 cd03800 GT1_Sucrose_synthase T 99.3 1.2E-10 2.5E-15 126.5 21.3 239 354-737 158-397 (398)
29 cd03805 GT1_ALG2_like This fam 99.3 1.3E-10 2.8E-15 126.9 20.4 130 471-616 209-339 (392)
30 PLN02871 UDP-sulfoquinovose:DA 99.3 2E-10 4.4E-15 130.3 21.1 231 356-742 202-433 (465)
31 cd04962 GT1_like_5 This family 99.3 2.9E-10 6.4E-15 122.6 21.1 232 352-739 135-367 (371)
32 PRK15427 colanic acid biosynth 99.3 2.5E-10 5.3E-15 127.8 19.9 177 473-741 222-404 (406)
33 PRK15490 Vi polysaccharide bio 99.2 9.7E-10 2.1E-14 126.4 23.8 127 471-628 396-522 (578)
34 cd03821 GT1_Bme6_like This fam 99.2 5.5E-10 1.2E-14 117.6 20.2 122 470-616 200-321 (375)
35 cd03809 GT1_mtfB_like This fam 99.2 2.2E-10 4.7E-15 121.5 17.0 233 352-738 133-365 (365)
36 cd03819 GT1_WavL_like This fam 99.2 1.3E-09 2.9E-14 116.4 19.8 188 359-626 124-312 (355)
37 cd03788 GT1_TPS Trehalose-6-Ph 99.2 5.3E-10 1.2E-14 127.3 17.6 254 241-602 131-386 (460)
38 cd03818 GT1_ExpC_like This fam 99.2 1.2E-09 2.7E-14 120.8 19.9 240 353-738 150-396 (396)
39 TIGR03088 stp2 sugar transfera 99.2 1.5E-09 3.3E-14 118.3 20.0 121 471-616 192-312 (374)
40 cd03822 GT1_ecORF704_like This 99.1 2.2E-09 4.8E-14 113.9 19.8 178 471-739 183-364 (366)
41 cd03807 GT1_WbnK_like This fam 99.1 2.9E-09 6.3E-14 111.7 20.2 124 464-617 186-309 (365)
42 cd05844 GT1_like_7 Glycosyltra 99.1 4.6E-09 1E-13 113.1 21.9 174 473-738 188-366 (367)
43 cd04951 GT1_WbdM_like This fam 99.1 2.6E-09 5.6E-14 114.0 18.7 121 464-615 181-301 (360)
44 cd03792 GT1_Trehalose_phosphor 99.1 2E-09 4.3E-14 117.9 17.4 186 464-742 183-371 (372)
45 PRK15179 Vi polysaccharide bio 99.1 7.4E-09 1.6E-13 123.0 22.4 126 471-627 515-640 (694)
46 cd03795 GT1_like_4 This family 99.1 4.1E-09 9E-14 112.3 18.3 181 356-626 134-314 (357)
47 PRK10307 putative glycosyl tra 99.0 1.5E-08 3.2E-13 112.7 21.5 173 352-609 164-340 (412)
48 cd03799 GT1_amsK_like This is 99.0 6E-09 1.3E-13 111.0 17.6 170 356-617 127-302 (355)
49 cd03808 GT1_cap1E_like This fa 99.0 1.8E-08 3.9E-13 105.2 19.9 172 471-737 186-358 (359)
50 PHA01633 putative glycosyl tra 99.0 4.6E-09 1E-13 115.1 14.7 186 471-738 146-335 (335)
51 cd03825 GT1_wcfI_like This fam 99.0 2.3E-08 5E-13 106.9 19.6 226 358-741 134-363 (365)
52 cd03798 GT1_wlbH_like This fam 99.0 6.5E-08 1.4E-12 101.3 21.1 175 355-616 144-318 (377)
53 TIGR02400 trehalose_OtsA alpha 99.0 3.8E-08 8.1E-13 112.3 20.4 253 241-602 127-381 (456)
54 cd03801 GT1_YqgM_like This fam 99.0 1E-07 2.2E-12 99.1 22.1 288 240-739 84-372 (374)
55 cd03817 GT1_UGDG_like This fam 98.9 2.9E-08 6.2E-13 104.8 17.5 187 352-627 141-327 (374)
56 PRK15484 lipopolysaccharide 1, 98.9 5E-08 1.1E-12 108.2 18.5 137 464-625 186-324 (380)
57 cd03802 GT1_AviGT4_like This f 98.9 2.9E-08 6.3E-13 105.3 15.6 122 474-627 172-293 (335)
58 cd03812 GT1_CapH_like This fam 98.9 3.4E-08 7.4E-13 105.7 15.0 176 354-617 132-307 (358)
59 cd03794 GT1_wbuB_like This fam 98.9 9.6E-08 2.1E-12 100.9 17.8 229 354-737 160-394 (394)
60 PF05693 Glycogen_syn: Glycoge 98.8 1.3E-07 2.9E-12 108.8 18.8 290 211-606 120-499 (633)
61 cd03816 GT1_ALG1_like This fam 98.8 5.9E-07 1.3E-11 100.8 21.5 135 471-627 230-366 (415)
62 cd03814 GT1_like_2 This family 98.8 1E-06 2.2E-11 93.3 21.7 169 471-740 195-363 (364)
63 cd03811 GT1_WabH_like This fam 98.7 3.9E-07 8.4E-12 94.7 15.4 127 470-627 186-312 (353)
64 TIGR02918 accessory Sec system 98.6 5.8E-07 1.3E-11 103.7 15.6 176 474-739 320-496 (500)
65 PLN03063 alpha,alpha-trehalose 98.6 1.4E-06 3.1E-11 105.6 19.5 249 242-602 148-401 (797)
66 cd04949 GT1_gtfA_like This fam 98.6 2.4E-07 5.2E-12 100.9 10.8 167 474-736 205-372 (372)
67 PRK10125 putative glycosyl tra 98.6 2.3E-06 5E-11 96.2 18.6 113 471-627 239-354 (405)
68 PF00534 Glycos_transf_1: Glyc 98.6 8.1E-07 1.8E-11 86.2 12.9 130 469-626 11-140 (172)
69 PRK14501 putative bifunctional 98.6 2.4E-06 5.2E-11 102.9 19.6 128 472-611 264-401 (726)
70 PLN02949 transferase, transfer 98.5 1.1E-06 2.4E-11 100.5 15.4 119 472-608 267-386 (463)
71 cd03820 GT1_amsD_like This fam 98.5 5E-07 1.1E-11 93.9 10.7 170 472-737 177-347 (348)
72 PLN02501 digalactosyldiacylgly 98.5 5.2E-06 1.1E-10 97.6 17.9 105 476-611 549-653 (794)
73 PHA01630 putative group 1 glyc 98.4 1.2E-06 2.6E-11 96.0 11.9 186 473-740 142-328 (331)
74 cd04955 GT1_like_6 This family 98.4 1.5E-06 3.3E-11 93.1 12.0 111 474-613 194-305 (363)
75 PRK09922 UDP-D-galactose:(gluc 98.4 6.6E-06 1.4E-10 90.1 15.7 122 473-626 180-306 (359)
76 cd01635 Glycosyltransferase_GT 98.4 6.9E-07 1.5E-11 88.1 6.9 120 478-626 109-229 (229)
77 cd03823 GT1_ExpE7_like This fa 98.4 1.2E-05 2.5E-10 84.9 16.5 114 471-615 189-302 (359)
78 cd04946 GT1_AmsK_like This fam 98.3 8.6E-06 1.9E-10 91.3 14.6 228 352-737 176-406 (407)
79 TIGR03087 stp1 sugar transfera 98.2 1.5E-05 3.3E-10 88.5 13.7 224 354-738 167-392 (397)
80 cd03806 GT1_ALG11_like This fa 98.2 1.1E-05 2.4E-10 91.0 12.0 193 352-626 182-376 (419)
81 cd03804 GT1_wbaZ_like This fam 98.0 2.1E-05 4.6E-10 85.0 10.4 104 474-615 196-299 (351)
82 PLN02846 digalactosyldiacylgly 98.0 4.7E-05 1E-09 87.1 12.1 120 473-626 228-347 (462)
83 KOG1111 N-acetylglucosaminyltr 97.8 0.00016 3.4E-09 79.0 12.5 110 471-607 193-302 (426)
84 TIGR02398 gluc_glyc_Psyn gluco 97.7 0.0026 5.7E-08 73.4 20.4 137 461-611 278-421 (487)
85 PLN03064 alpha,alpha-trehalose 97.2 0.011 2.4E-07 72.9 18.9 126 473-610 363-498 (934)
86 PLN02275 transferase, transfer 97.1 0.0035 7.5E-08 69.5 11.2 136 474-627 214-358 (371)
87 COG0438 RfaG Glycosyltransfera 97.0 0.012 2.5E-07 60.1 13.9 118 473-617 199-317 (381)
88 KOG0853 Glycosyltransferase [C 97.0 0.0049 1.1E-07 70.7 11.3 132 471-615 271-404 (495)
89 TIGR00236 wecB UDP-N-acetylglu 96.2 0.25 5.3E-06 54.4 18.2 110 474-616 199-310 (365)
90 cd04950 GT1_like_1 Glycosyltra 96.1 0.045 9.7E-07 60.7 11.9 161 351-606 145-308 (373)
91 KOG3742 Glycogen synthase [Car 96.0 0.012 2.7E-07 65.9 6.3 109 349-504 242-355 (692)
92 PF13692 Glyco_trans_1_4: Glyc 95.4 0.031 6.7E-07 51.9 5.9 102 472-608 1-103 (135)
93 TIGR03713 acc_sec_asp1 accesso 94.4 0.38 8.2E-06 56.4 12.5 177 471-736 319-515 (519)
94 PRK05749 3-deoxy-D-manno-octul 94.2 0.46 9.9E-06 53.4 12.3 116 472-606 232-350 (425)
95 PRK10117 trehalose-6-phosphate 93.9 4.6 9.9E-05 47.0 19.7 129 473-612 255-393 (474)
96 PRK13609 diacylglycerol glucos 93.6 1.1 2.4E-05 49.5 13.8 43 556-606 257-299 (380)
97 PF00982 Glyco_transf_20: Glyc 92.5 1 2.2E-05 52.3 11.8 127 473-611 276-412 (474)
98 PRK00726 murG undecaprenyldiph 92.0 2.9 6.3E-05 45.6 14.2 164 470-740 180-355 (357)
99 PLN02605 monogalactosyldiacylg 91.6 1.4 3E-05 49.1 11.3 110 463-606 198-308 (382)
100 PRK13608 diacylglycerol glucos 91.4 1.5 3.2E-05 49.2 11.2 103 464-606 195-299 (391)
101 PLN02205 alpha,alpha-trehalose 91.0 2.7 5.8E-05 52.3 13.8 107 471-584 337-445 (854)
102 COG0380 OtsA Trehalose-6-phosp 89.9 16 0.00035 42.7 17.8 130 473-613 282-420 (486)
103 PF13579 Glyco_trans_4_4: Glyc 89.7 0.26 5.6E-06 45.9 2.8 89 240-396 72-160 (160)
104 TIGR01133 murG undecaprenyldip 86.9 9.6 0.00021 41.0 13.2 101 470-608 176-278 (348)
105 cd03785 GT1_MurG MurG is an N- 82.0 27 0.00059 37.6 13.9 101 470-608 178-280 (350)
106 PF13524 Glyco_trans_1_2: Glyc 80.0 4.6 9.9E-05 35.3 5.9 33 705-737 58-91 (92)
107 PF13439 Glyco_transf_4: Glyco 80.0 2.1 4.5E-05 40.4 4.0 40 357-402 137-176 (177)
108 cd03786 GT1_UDP-GlcNAc_2-Epime 78.4 10 0.00022 41.2 9.2 110 464-608 192-304 (363)
109 PRK00025 lpxB lipid-A-disaccha 77.6 7.8 0.00017 42.6 8.1 108 463-608 178-288 (380)
110 TIGR00215 lpxB lipid-A-disacch 74.4 11 0.00025 42.2 8.4 113 463-612 183-298 (385)
111 TIGR02919 accessory Sec system 71.8 27 0.00058 40.3 10.7 72 515-606 306-377 (438)
112 KOG1387 Glycosyltransferase [C 66.1 1.2E+02 0.0025 34.4 13.4 97 513-636 303-399 (465)
113 PF13477 Glyco_trans_4_2: Glyc 53.5 18 0.00039 33.5 4.2 36 240-289 73-109 (139)
114 cd01635 Glycosyltransferase_GT 43.1 45 0.00098 32.4 5.4 46 240-299 50-95 (229)
115 KOG2387 CTP synthase (UTP-ammo 36.0 5.6E+02 0.012 30.0 12.8 137 454-620 259-415 (585)
116 PF13844 Glyco_transf_41: Glyc 28.6 1E+03 0.022 28.0 14.4 115 463-609 277-392 (468)
117 TIGR03568 NeuC_NnaA UDP-N-acet 26.9 5.9E+02 0.013 28.4 11.4 67 556-633 263-329 (365)
118 PRK09814 beta-1,6-galactofuran 26.2 1E+02 0.0022 33.7 5.1 69 556-629 208-287 (333)
119 PF02684 LpxB: Lipid-A-disacch 25.9 1.9E+02 0.0041 32.9 7.3 111 469-613 180-292 (373)
120 PRK00726 murG undecaprenyldiph 21.7 1.9E+02 0.0041 31.4 6.2 37 240-291 90-126 (357)
121 cd03792 GT1_Trehalose_phosphor 20.5 86 0.0019 34.3 3.2 19 560-578 283-301 (372)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-217 Score=1747.74 Aligned_cols=736 Identities=56% Similarity=0.937 Sum_probs=708.5
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
|||+|||.|+|+++||||++.+.|||.+||+++|++.++|+|||||||||||||+||||||||||+|++||||||+||+|
T Consensus 88 lEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF 167 (843)
T KOG2099|consen 88 LEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIF 167 (843)
T ss_pred hHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWD 160 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~ 160 (749)
+|+|.+|||+|.||+||+.+||||+.|+++++||+|||+|+.+.+| ++|++++.|.|+|||+|||||++++|+++|||+
T Consensus 168 ~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWs 246 (843)
T KOG2099|consen 168 KQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWS 246 (843)
T ss_pred HHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeec
Confidence 9999999999999999999999999999999999999999987777 679999999999999999999999999999999
Q ss_pred eecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHccc-c-----c
Q 004485 161 AKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS-G-----R 234 (749)
Q Consensus 161 a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g-~-----~ 234 (749)
|+ +.++|+|..||.|+|..|+..++.+++||.+|||+|+..+||+||||||||+|+|+||||+|||+.... + .
T Consensus 247 ak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~ 325 (843)
T KOG2099|consen 247 AK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRT 325 (843)
T ss_pred cC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCccccccc
Confidence 99 667999999999999999999999999999999999999999999999999999999999999986543 1 3
Q ss_pred ccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHH
Q 004485 235 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 314 (749)
Q Consensus 235 ~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~ 314 (749)
.|+.||++++||+|||||+|+||||||+++|.+|++|++||+++.++|.|||||++||++|+||.++|+++||||+|||+
T Consensus 326 ~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy 405 (843)
T KOG2099|consen 326 NFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIY 405 (843)
T ss_pred chhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccc
Q 004485 315 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKT 394 (749)
Q Consensus 315 ~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~It 394 (749)
+||++|+..+.+.||.|.+++++||++|++++..+|||++|||++||+||||+++|++++|+..|++|+.++|+||.|+|
T Consensus 406 ~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkT 485 (843)
T KOG2099|consen 406 EINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKT 485 (843)
T ss_pred HHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhcccc
Confidence 99999999999999999999999999998322228999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCe
Q 004485 395 NGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 474 (749)
Q Consensus 395 NGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~ 474 (749)
|||+||||+.+|||.++++|.+.+| ++|.+|+++|.+|.++++|++|++.|.++|++||.+|+++|.+++|..++|+++
T Consensus 486 NGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~sm 564 (843)
T KOG2099|consen 486 NGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSM 564 (843)
T ss_pred CCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchh
Confidence 9999999999999999999999999 599999999999999999999999999999999999999999999999999999
Q ss_pred eEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCc
Q 004485 475 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSY 554 (749)
Q Consensus 475 ~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~ 554 (749)
||+||||+||||||.||+|+++.+|.+||+ +|.. ..+|++++|+|||+|+|++||.|||+|++++.+|||||.+.++
T Consensus 565 FDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~ 641 (843)
T KOG2099|consen 565 FDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDR 641 (843)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhhe
Confidence 999999999999999999999999999998 6653 5689999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccch
Q 004485 555 LKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVP 634 (749)
Q Consensus 555 lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~ 634 (749)
|||+|+|||+|++|++|+||||+++++|++|+||||||||||||||+|+|||||||||||.|++|.||+|+||+.+|+|+
T Consensus 642 LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V~ 721 (843)
T KOG2099|consen 642 LKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDVE 721 (843)
T ss_pred eEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhh
Q 004485 635 KLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 708 (749)
Q Consensus 635 ~~~~~~~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~ 708 (749)
.++++| |+. +...|++++|++++.+|+|++.+ +.++++++.. .|+|+|++||+||++||++|.+.|+
T Consensus 722 ~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~------hD~f~V~~Df~sYi~~q~kVd~~y~ 794 (843)
T KOG2099|consen 722 ALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMY------HDYFLVFADFEAYIKCQEKVDQLYR 794 (843)
T ss_pred HHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhc------cceEEeeCcHHHHHHHHHHHHHHHh
Confidence 999887 554 46689999999999999999888 5666666663 4999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccccccCC
Q 004485 709 DQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRTS 749 (749)
Q Consensus 709 d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~~~~~~~~ 749 (749)
|+++|.+|++.|+|.+|+|||||||.|||++||+++|++++
T Consensus 795 nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 795 NQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred CHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 99999999999999999999999999999999999998753
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=3.1e-215 Score=1839.62 Aligned_cols=728 Identities=57% Similarity=0.942 Sum_probs=705.2
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
|||||||+|.|||+|||+++++++||++||+++|+++++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 57 ~EfL~Gr~l~nnl~nlgl~~~~~~~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F 136 (794)
T TIGR02093 57 AEFLMGRLLGNNLLNLGLYDEVKEALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLF 136 (794)
T ss_pred hhhhcchHHHHHHHhCCCHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCce
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCC-Cc--eeeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN-GT--RKWVGGEVVQAVAYDIPIPGYKTKNTISLR 157 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~-g~--~~w~~~~~v~a~~yd~~i~g~~~~~~~~lr 157 (749)
+|+|.||||+|.||+|+..++|||++|++.+++|+|+|+++...+ |+ .+|++.+.|+|+|||+|||||+++++++||
T Consensus 137 ~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LR 216 (794)
T TIGR02093 137 KQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLR 216 (794)
T ss_pred EEEEECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEE
Confidence 999999999999999999999999999999999999999975443 53 349999999999999999999999999999
Q ss_pred EEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccc
Q 004485 158 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 237 (749)
Q Consensus 158 lw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~ 237 (749)
||+++ +...|++..|+.|+|.+++++++.+|+||++|||+|++++||++||+||||||+||+|||+|+|++.+ .+++
T Consensus 217 LW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~--~~l~ 293 (794)
T TIGR02093 217 LWSAE-APEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH--PDLS 293 (794)
T ss_pred EEEec-CccccCHhhccCccHhhhhhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC--CChh
Confidence 99999 46679999999999999999999999999999999999999999999999999999999999999988 4799
Q ss_pred cCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHH
Q 004485 238 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 317 (749)
Q Consensus 238 ~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in 317 (749)
.|++|.+||+|||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||.+|++++||||++||++||
T Consensus 294 ~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In 373 (794)
T TIGR02093 294 DFPKKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEIN 373 (794)
T ss_pred hCCcceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccccccccccCCCCCC-ccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccC
Q 004485 318 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNG 396 (749)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~-~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNG 396 (749)
++|+..++..+|.+++++.+|+||++ +.+ +|||++|||++||+|||||++|++++++.+|++|+.+||+||.+||||
T Consensus 374 ~~fl~~~~~~~p~d~~~~~~~sii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNG 451 (794)
T TIGR02093 374 RRFLAELAAKGPGDEAKIRRMSIIEE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNG 451 (794)
T ss_pred HHHHHHHHHhCCCcHHHHhheeeeec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCC
Confidence 99999999999999999999999997 334 799999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeE
Q 004485 397 ITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFD 476 (749)
Q Consensus 397 I~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~ 476 (749)
||+|||+.+|||+++++|++++| ++|.+|++.|++|.++++|++|+++|+++|++||++|+++|++++|+.+||+++||
T Consensus 452 Vt~rrWl~~~np~L~~Li~~~ig-~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfd 530 (794)
T TIGR02093 452 ITPRRWLRLANPGLSALLTETIG-DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFD 530 (794)
T ss_pred CCccchhhhcCHHHHHHHHHhcC-chhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccch
Confidence 99999999999999999999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred eEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcce
Q 004485 477 IQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLK 556 (749)
Q Consensus 477 ~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lk 556 (749)
+|||||||||||+||+|++++||.+|++ +|+. +++|+||||||||||+|.+||+|||+|+++|++||+||++.++||
T Consensus 531 vq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lk 607 (794)
T TIGR02093 531 VQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLK 607 (794)
T ss_pred hhheechhhhHHHHHHhhhHHHHHHHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCcee
Confidence 9999999999999999999999999997 6653 467999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhh
Q 004485 557 VVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL 636 (749)
Q Consensus 557 vvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~ 636 (749)
|||+|||||++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||+++||++|+|+||+++++|.++
T Consensus 608 VVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~ 687 (794)
T TIGR02093 608 VVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEAL 687 (794)
T ss_pred EEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCH
Q 004485 637 RKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 710 (749)
Q Consensus 637 ~~~~~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~ 710 (749)
++++ |+| ++.+|.+++++|.+.+|+|++.+ |++|+++|..+ +|+|||++||+||++||++|.+.|+|+
T Consensus 688 ~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~ 761 (794)
T TIGR02093 688 REKG-YNPREYYEADPELKRVLDLISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVLADFAAYVDAQERVDALYRDQ 761 (794)
T ss_pred HHcC-CCchhcccCCHHHHHHHHHHhcCCCCCCCchHHHHHHHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhcCH
Confidence 8888 988 57899999999999999998665 99999999855 899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 004485 711 KKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743 (749)
Q Consensus 711 ~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~~ 743 (749)
++|.+|++.|||.+|+|||||||+|||++||++
T Consensus 762 ~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 794 (794)
T TIGR02093 762 LEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794 (794)
T ss_pred HHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCc
Confidence 999999999999999999999999999999985
No 3
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=5.4e-215 Score=1834.98 Aligned_cols=726 Identities=46% Similarity=0.803 Sum_probs=705.6
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
|||||||+|.|||+|||++++++|||++||+|+|+|+++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 66 ~EfL~Gr~l~nnl~nlgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F 145 (798)
T PRK14985 66 MEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLF 145 (798)
T ss_pred hhhhccHHHHHHHHhcCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWD 160 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~ 160 (749)
+|+|+||+|+|.||.|+..++||++++++.+++|+|+|+++.. +|+.+|++++.|.|+|||+|||||+++++++||||+
T Consensus 146 ~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~ 224 (798)
T PRK14985 146 RQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQ 224 (798)
T ss_pred EEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeE
Confidence 9999999999999999999999999999999999999999764 787789999999999999999999999999999999
Q ss_pred eecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCC
Q 004485 161 AKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240 (749)
Q Consensus 161 a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~ 240 (749)
++++ ..|++..||.|+|.+++++++.+|+||++|||+|++++||+|||+||||||+||+|||+|+|++.| ++++.|+
T Consensus 225 a~~~-~~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~--~~l~~l~ 301 (798)
T PRK14985 225 ATHA-HPFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELP 301 (798)
T ss_pred cCCC-CccCHHHcCCcchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChhhCC
Confidence 9954 489999999999999999999999999999999999999999999999999999999999999876 6899999
Q ss_pred CCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHH
Q 004485 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 320 (749)
Q Consensus 241 ~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~ 320 (749)
+|.+||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||.+|++++||||++||++||++|
T Consensus 302 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~f 381 (798)
T PRK14985 302 DYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRF 381 (798)
T ss_pred CCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcc
Q 004485 321 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 400 (749)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~ 400 (749)
+..++..+|.+.+++.+|+||++ ++|||++|||++|++|||||++|++++++.+|++|+.+||++|.+||||||+|
T Consensus 382 l~~~~~~~~~d~~~~~~~sii~~----~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~r 457 (798)
T PRK14985 382 KTLVEKTWPGDKKVWAKLAVVHD----KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPR 457 (798)
T ss_pred HHHHHHhCCCcHHHhhhhhhccC----CeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcc
Confidence 99999999999999999999986 48999999999999999999999999888999999999999999999999999
Q ss_pred cccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcc
Q 004485 401 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480 (749)
Q Consensus 401 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~ 480 (749)
||+.+|||+++++|++++|+ +|.+|++.+++|.++.+|++|+++|+++|++||++|+++|+++.|..+||+++||+|||
T Consensus 458 rWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 458 RWIKQCNPALAALLDKTLKK-EWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred hhhhhhCHHHHHHHHHhcCc-chhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 99999999999999999994 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEE
Q 004485 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFV 560 (749)
Q Consensus 481 R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~ 560 (749)
||||||||+||+|++++||.+|++ +|.. +.+|+||||||||||+|.+||+|||+|+++|++||+||++.++|||||+
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 999999999999999999999998 6653 4579999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhc
Q 004485 561 PNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKER 640 (749)
Q Consensus 561 ~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~ 640 (749)
|||||++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||+++||++|+|+||+++++|.+++.++
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~ 693 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG 693 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHH
Q 004485 641 EDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWL 714 (749)
Q Consensus 641 ~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~ 714 (749)
|+| ++.+|++++|+|++.+|.|++.+ |++|+++|..+ +|+|||++||+||++||++|.+.|.|+++|.
T Consensus 694 -y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~d~~~W~ 767 (798)
T PRK14985 694 -YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYRDQEAWT 767 (798)
T ss_pred -CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHH
Confidence 988 57899999999999999998766 99999999855 8999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhccc
Q 004485 715 KMSILSTAGSGKFSSDRTIAQYAKEIWNIT 744 (749)
Q Consensus 715 ~~~~~~ma~~g~FS~drsi~eY~~~iw~~~ 744 (749)
+|++.|||.+|+|||||||+|||++||+++
T Consensus 768 ~~~i~Nia~~G~FSsDRtI~eYa~~IW~~~ 797 (798)
T PRK14985 768 RAAILNTARCGMFSSDRSIRDYQARIWQAK 797 (798)
T ss_pred HHHHHHHHccCCcCcHHHHHHHHHHhhCCC
Confidence 999999999999999999999999999985
No 4
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=1.2e-213 Score=1833.44 Aligned_cols=728 Identities=56% Similarity=0.925 Sum_probs=703.9
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
|||||||+|.|||+|||+++++++||++||+++|+|+++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 60 ~EfL~Gr~L~nnl~nLgl~~~~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F 139 (797)
T cd04300 60 LEFLMGRLLGNNLLNLGLYDEVREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLF 139 (797)
T ss_pred hhhhcchHHHHHHHhCCcHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCC-Cc--eeeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN-GT--RKWVGGEVVQAVAYDIPIPGYKTKNTISLR 157 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~-g~--~~w~~~~~v~a~~yd~~i~g~~~~~~~~lr 157 (749)
+|+|++|||+|.||+|+..++|||++|++.+++|+|+|+++...+ |+ .+|++++.|+|+|||+|||||+++++++||
T Consensus 140 ~Q~i~~G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LR 219 (797)
T cd04300 140 KQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLR 219 (797)
T ss_pred EEEEECCEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEE
Confidence 999999999999999999999999999999999999999976443 64 339999999999999999999999999999
Q ss_pred EEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccc
Q 004485 158 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 237 (749)
Q Consensus 158 lw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~ 237 (749)
||+++ +...++++.|+.++|.+++++++.+|+||++|||+|++++||+|||+||||||+||+|+|+|+|++.++ +++
T Consensus 220 LW~a~-~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~--~~~ 296 (797)
T cd04300 220 LWSAE-ASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG--PLS 296 (797)
T ss_pred EEEee-CCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC--Chh
Confidence 99999 456799999999999999999999999999999999999999999999999999999999999999984 689
Q ss_pred cCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHH
Q 004485 238 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 317 (749)
Q Consensus 238 ~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in 317 (749)
.|+++.+||+|||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||.++++++||||++||++||
T Consensus 297 ~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In 376 (797)
T cd04300 297 EFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEIN 376 (797)
T ss_pred hCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccccccccccCCCCC-CccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccC
Q 004485 318 KRFIAMVRSTRSDLESKIPSMCILDNNPKK-PVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNG 396 (749)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~iie~~~~~-~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNG 396 (749)
++|+..+++.+|.+++++.+|+++++ +. ++|||++|||++||+|||||++|++++|+++|++|+.+||+||.+||||
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~l~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNG 454 (797)
T cd04300 377 RRFLEEVRAKYPGDEDRIRRMSIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNG 454 (797)
T ss_pred HHHHHHHHHhcCCCHHHHHhhccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCC
Confidence 99999999999999999999999986 33 3799999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeE
Q 004485 397 ITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFD 476 (749)
Q Consensus 397 I~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~ 476 (749)
||+|||+.+|||+++++|++++|+ +|.+|++.+++|.++++|++|+++|+++|++||++|+++|++++|+.+||+++||
T Consensus 455 Vt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfd 533 (797)
T cd04300 455 ITPRRWLLQANPGLSALITETIGD-DWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFD 533 (797)
T ss_pred CCcchhhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEE
Confidence 999999999999999999999994 9999999999999999999999999999999999999999999999999999999
Q ss_pred eEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcce
Q 004485 477 IQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLK 556 (749)
Q Consensus 477 ~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lk 556 (749)
+|||||||||||+||+|++++||.+|++ +|+. +++|+||||||||||+|.+||+|||+|+++|++|||||.+.++||
T Consensus 534 vq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lk 610 (797)
T cd04300 534 VQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLK 610 (797)
T ss_pred EEeeechhhhhhhhHHHhhHHHHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceE
Confidence 9999999999999999999999999997 6653 467999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhh
Q 004485 557 VVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL 636 (749)
Q Consensus 557 vvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~ 636 (749)
|||+|||||++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||+++||++|+|+||+++++|.++
T Consensus 611 VVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~ 690 (797)
T cd04300 611 VVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEAL 690 (797)
T ss_pred EEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCH
Q 004485 637 RKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 710 (749)
Q Consensus 637 ~~~~~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~ 710 (749)
++++ |+| ++.+|.+++++|.+.+|.|++.+ |++|+++|..+ +|+|||++||+||++||++|.+.|+|+
T Consensus 691 ~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~ 764 (797)
T cd04300 691 RANG-YYPADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYRDQ 764 (797)
T ss_pred HHcC-CChHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHHccCH
Confidence 8888 666 68899999999999999997544 99999999865 899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 004485 711 KKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743 (749)
Q Consensus 711 ~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~~ 743 (749)
++|.+|++.|||++|+|||||||+|||++||++
T Consensus 765 ~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 797 (797)
T cd04300 765 EEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797 (797)
T ss_pred HHHHHHHHHHHHccCCcCCcccHHHHHHHhhCc
Confidence 999999999999999999999999999999985
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=2.2e-212 Score=1819.67 Aligned_cols=731 Identities=47% Similarity=0.819 Sum_probs=708.0
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
|||||||+|.|||+|||+++++++||++||+|+|+|+++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 77 ~EfL~Gr~l~nnl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F 156 (815)
T PRK14986 77 MEFLIGRTLSNALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMF 156 (815)
T ss_pred hhhhccHHHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCc-eeeeCCeEEEEEEeeeccCCCCCCceEEEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGT-RKWVGGEVVQAVAYDIPIPGYKTKNTISLRLW 159 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~g~-~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw 159 (749)
+|+|.||||+|.||+|+..++||+++|++.+++|+|+|+++.. |. .+|++++.|+|||||+|||||+++++++||||
T Consensus 157 ~Q~I~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW 234 (815)
T PRK14986 157 KQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLW 234 (815)
T ss_pred EEEEECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEE
Confidence 9999999999999999999999999999999999999999753 53 34999999999999999999999999999999
Q ss_pred EeecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccC
Q 004485 160 DAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF 239 (749)
Q Consensus 160 ~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l 239 (749)
+++ +...||+..|+.|+|..++.+.+.+++||++|||+|++++||++||+||||||+||+|||+|+|++.+ ++++.|
T Consensus 235 ~a~-~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~--~~l~~l 311 (815)
T PRK14986 235 SAQ-ASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH--KTYDNL 311 (815)
T ss_pred Eee-cCcccCHhhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC--CCHhhC
Confidence 999 56689999999999999999999999999999999999999999999999999999999999999998 579999
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 319 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~ 319 (749)
+++.+||+|||||||++|||||+++|++|++|++||++|+.+|+||||||+|||+|+||.++++++||||++||++||++
T Consensus 312 ~~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~ 391 (815)
T PRK14986 312 ADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDY 391 (815)
T ss_pred CcccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCC-ccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCC
Q 004485 320 FIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGIT 398 (749)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~iie~~~~~~-~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~ 398 (749)
|+..+++.+|.+++++.+++||++ +.+ +|||++||+++||+|||||++|++++++.+|++|+.+||+||.+||||||
T Consensus 392 fl~~~~~~~~~~~~~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~ 469 (815)
T PRK14986 392 FLKTLQEQYPNDTDLLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVT 469 (815)
T ss_pred HHHHHHHhCCCcHHHHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCC
Confidence 999999999999999999999986 333 79999999999999999999999999888999999999999999999999
Q ss_pred cccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeE
Q 004485 399 PRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQ 478 (749)
Q Consensus 399 ~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~ 478 (749)
+|||+.+|||+++++|++++|+ +|.+|++++++|.++.+|++|+++|+++|++||++|+++|++++|..+||+++||+|
T Consensus 470 ~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~q 548 (815)
T PRK14986 470 PRRWLALANPSLSAVLDEHIGR-TWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQ 548 (815)
T ss_pred hhhHhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeee
Confidence 9999999999999999999995 899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEE
Q 004485 479 VKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 558 (749)
Q Consensus 479 v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvv 558 (749)
||||||||||+||+|++++||.+|++ ||.. +++|+||||||||||+|.+||+|||+|+++|++|||||.++++||||
T Consensus 549 akR~heYKRq~LNil~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVV 625 (815)
T PRK14986 549 IKRIHEYKRQLMNVLHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVV 625 (815)
T ss_pred ehhhhhhhhhhHHHhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEE
Confidence 99999999999999999999999987 6643 45799999999999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhh
Q 004485 559 FVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRK 638 (749)
Q Consensus 559 F~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~ 638 (749)
|+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||++++|++|+|+||+++++|.+++.
T Consensus 626 FlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~ 705 (815)
T PRK14986 626 FIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRR 705 (815)
T ss_pred EeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHH
Q 004485 639 EREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712 (749)
Q Consensus 639 ~~~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~ 712 (749)
++ |+| ++.+|.+++++|++.+|+|++.+ |++|+++|..+ +|+|+|++||+||++||++|.+.|+|+++
T Consensus 706 ~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~d~~~ 779 (815)
T PRK14986 706 QG-YKPREYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELYRNQEE 779 (815)
T ss_pred cC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHH
Confidence 87 988 57799999999999999998765 99999999855 89999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 004485 713 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 748 (749)
Q Consensus 713 W~~~~~~~ma~~g~FS~drsi~eY~~~iw~~~~~~~ 748 (749)
|.+|++.|||++|+|||||||++||++||+++||++
T Consensus 780 W~~~~i~Nia~~G~FSsDRtI~~Ya~~IW~~~p~~~ 815 (815)
T PRK14986 780 WTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVRL 815 (815)
T ss_pred HHHHHHHHHhCCCCcCCchhHHHHHHHhhCCCccCC
Confidence 999999999999999999999999999999999874
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=2.2e-207 Score=1758.89 Aligned_cols=705 Identities=53% Similarity=0.894 Sum_probs=635.2
Q ss_pred HHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcc
Q 004485 25 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 104 (749)
Q Consensus 25 ~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe 104 (749)
||++||+++++|+++|+|||||||||||||||||||+|+||+|++||||||+||+|+|+|.||+|+|.||+|+..++|||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEECCeEEEcCCCce-eeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHh
Q 004485 105 VVRHDVVFPVRFFGSVMVNPNGTR-KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQ 183 (749)
Q Consensus 105 ~~~~~~~~~v~~~g~~~~~~~g~~-~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~ 183 (749)
++|++.+|+|+|+|+|+. .+|+. +|++++.|+|+|||+|||||++++||+||||+|+ +..+|++..|+.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~~-~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVED-DGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEEe-cCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 999999999999999983 34554 4999999999999999999999999999999999 77889999999999999999
Q ss_pred hhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHH
Q 004485 184 LHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLL 263 (749)
Q Consensus 184 ~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l 263 (749)
++..+++||++|||+|++++||+|||||||||++|++|||+|+|++.+ .+++.|+++.+||||||||||++||+||++
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L 236 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRIL 236 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 589999999999999999999999999999
Q ss_pred HHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccC
Q 004485 264 MDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDN 343 (749)
Q Consensus 264 ~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~ 343 (749)
++++|++|++||++|+++|+||||||+|||+|+||.+||+++||||++||++||++|+..+...++.+++++.+++++++
T Consensus 237 ~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~ 316 (713)
T PF00343_consen 237 MDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE 316 (713)
T ss_dssp HHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET
T ss_pred HHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCC-ccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccc
Q 004485 344 NPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQ 422 (749)
Q Consensus 344 ~~~~~-~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~ 422 (749)
+.+ .|||++|||++|++|||||++|++++++++|++|+.++|++|.+||||||+|||++.|||++++++++++| ++
T Consensus 317 --~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~ 393 (713)
T PF00343_consen 317 --GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DD 393 (713)
T ss_dssp --SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SG
T ss_pred --cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-cc
Confidence 333 89999999999999999999999999999999999999999999999999999999999999999999999 59
Q ss_pred cccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHH
Q 004485 423 WVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKL 502 (749)
Q Consensus 423 W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i 502 (749)
|.+|++.+++|.++++|+.|+++++++|+++|.+|+++|+++.|+.+||+++||+||||||+||||+||+|+++++|.+|
T Consensus 394 W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~ri 473 (713)
T PF00343_consen 394 WRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRI 473 (713)
T ss_dssp GGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccC
Q 004485 503 KEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS 582 (749)
Q Consensus 503 ~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S 582 (749)
++ +|+. ..+|+||||||||||+|.+||+|||+|+++|++||+||++.++|||||+|||||++|++|+||||||||+|
T Consensus 474 k~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p 550 (713)
T PF00343_consen 474 KN-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIP 550 (713)
T ss_dssp HH-STTS--CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE--
T ss_pred Hh-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCC
Confidence 98 6653 46799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCC---CCCChhHHHHHHHHh
Q 004485 583 TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIR 659 (749)
Q Consensus 583 ~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~ 659 (749)
|||+||||||||||||||+|+|||||||||||++++|.+|+|+||.++|+|.+++.++ |+| ++.+|.+++++|.+.
T Consensus 551 ~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~ 629 (713)
T PF00343_consen 551 TRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQII 629 (713)
T ss_dssp -TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHH
T ss_pred CCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999998776 877 477899999999999
Q ss_pred cCCCCC---CChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHH
Q 004485 660 SGAFGS---YDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQY 736 (749)
Q Consensus 660 ~G~F~~---~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY 736 (749)
+|.|++ ..|++|++++..+ +|+|+|++||+||++||++|.+.|.|+++|.+|++.|+|++|+|||||||+||
T Consensus 630 ~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDrtI~~Y 704 (713)
T PF00343_consen 630 SGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDRTIREY 704 (713)
T ss_dssp HTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHH
T ss_pred cCCCCCCCchhHHHHHhCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 999977 4599999996544 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccc
Q 004485 737 AKEIWNITE 745 (749)
Q Consensus 737 ~~~iw~~~~ 745 (749)
|++||+++|
T Consensus 705 a~~IW~~~p 713 (713)
T PF00343_consen 705 AEDIWNVKP 713 (713)
T ss_dssp HHHTTTS--
T ss_pred HHHhhCCCC
Confidence 999999987
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-173 Score=1481.50 Aligned_cols=675 Identities=49% Similarity=0.791 Sum_probs=625.9
Q ss_pred CcccCCcchHHHHHccCcHHHHHHHHHHcCCCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccc
Q 004485 1 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLF 80 (749)
Q Consensus 1 ~efl~Gr~l~~~l~nl~~~~~~~~~l~~~g~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF 80 (749)
||||+||+|.|||+|+|+++.++++|+++|++++++.+.|+|+++| ||||||||||||||||||+|++||||+|+||||
T Consensus 69 ~efL~grl~~~~l~n~g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF 147 (750)
T COG0058 69 MEFLIGRLLGNNLWNLGIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYF 147 (750)
T ss_pred HHHHHHHhhhcchhhhcchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCce
Confidence 6999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEE
Q 004485 81 KQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWD 160 (749)
Q Consensus 81 ~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~ 160 (749)
+|++.||||+|.|+.|+..++||++.|. . + |+|||+||+||++ ++|++|||+
T Consensus 148 ~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~---------------~---------~---a~~~d~~V~g~~~-~~~~lrlW~ 199 (750)
T COG0058 148 RQSDVDGWQVELPDEWLKYGNPWEFLRD---------------A---------E---GVPYDVPVPGYDN-RVVTLRLWQ 199 (750)
T ss_pred eeeccCCceEecchhhhccCCcceeecc---------------c---------C---CceeeeeEEeccC-cEEEEEEEE
Confidence 9998899999999999999999998753 0 1 5899999999999 999999999
Q ss_pred eecCCCcccccccCcchhhhHHhhhhhhccccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCC
Q 004485 161 AKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFP 240 (749)
Q Consensus 161 a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~ 240 (749)
+++++.+|.|..+|.+ ++.+.+|+||++|||+|+ +++||+||||||+||+|+|++++...++ ++
T Consensus 200 a~~~~~~~~l~~~n~~------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~--~~---- 263 (750)
T COG0058 200 AQVGRVPLYLLDFNVG------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH--DL---- 263 (750)
T ss_pred EecCccceEeecCCCc------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc--cc----
Confidence 9977656666556655 568899999999999998 7999999999999999999998544441 23
Q ss_pred CCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHH
Q 004485 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 320 (749)
Q Consensus 241 ~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~ 320 (749)
++-+.|+|||||||++||+||.+++++|++|++||++|+.+|+||||||+|+|+|+||.++|+++||||++||++||.+|
T Consensus 264 ~~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~ 343 (750)
T COG0058 264 DVLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARF 343 (750)
T ss_pred cchhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhh
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcc
Q 004485 321 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 400 (749)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~ 400 (749)
+.+++...+.+ ++.++++++ .|||++||+++|++|||||++|+|+++++.+++|++++|.+|.+||||||+|
T Consensus 344 l~~~~~~~~~~--~~~~~~~i~------~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~r 415 (750)
T COG0058 344 LPEVRLLYLGD--LIRRGSPIE------EVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPR 415 (750)
T ss_pred hHHHHhhcccc--ccccCCccc------ceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCc
Confidence 99999998876 566677765 2999999999999999999999999999888899999999999999999999
Q ss_pred cccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcc
Q 004485 401 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480 (749)
Q Consensus 401 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~ 480 (749)
||+..|||.+.+++.+.+|. .|..+++.++++..+++|+.+++.++.+|.+||++|+++++++.|+.+||+++||+|||
T Consensus 416 rWl~~~n~~L~~~~~~~ig~-~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~k 494 (750)
T COG0058 416 RWLAPANPGLADLLDEKIGD-EWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQAR 494 (750)
T ss_pred hhhhhhhHHHHHHHhhhhhh-hhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeeh
Confidence 99999999999999999994 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEE
Q 004485 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFV 560 (749)
Q Consensus 481 R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~ 560 (749)
|||+||||+||+++++.+|..+++ | ..+|+|+||||||||+|+.||+|||+|+++|+++|+ ++||||+
T Consensus 495 RiheYKRq~Lnl~~i~~ly~~i~~-d-----~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl 562 (750)
T COG0058 495 RIHEYKRQLLNLLDIERLYRILKE-D-----WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFL 562 (750)
T ss_pred hhhhhhhhHHhHhhHHHHHHHHhc-C-----CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEe
Confidence 999999999999998888888763 1 124788899999999999999999999999999875 6799999
Q ss_pred cCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhc
Q 004485 561 PNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKER 640 (749)
Q Consensus 561 ~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~ 640 (749)
|||||++|++|+||||||||||+||+||||||||||||||+|||||||||||||++++|++|||+||+++++|..+..++
T Consensus 563 ~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~ 642 (750)
T COG0058 563 PNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADG 642 (750)
T ss_pred CCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred cCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhcCCCCCCC-ccccccCCchHHHHHHHHHHHHhhCHHHH
Q 004485 641 EDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRG-DYFLVGYDFPSYLEAQDRVDQAYKDQKKW 713 (749)
Q Consensus 641 ~y~~---~~~~~~~~~~~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~-d~~~~~~df~~y~~~~~~~~~~Y~d~~~W 713 (749)
.+.. +...++++.+++.+.+|.|++.. +++++++|.. .-+ |+|++++||++|++||+++.+.|+++++|
T Consensus 643 ~~~~~~y~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~sl~~----~~~~dr~~~~yd~~~Y~~aq~~~~~~~~~~~~W 718 (750)
T COG0058 643 YDPNALYYELENEVKPVLDEIIDGRFSPGWKSRFKNLIDSLLP----KFGTDRMMVLYDFKAYVPAQEEVDALYRDQEAW 718 (750)
T ss_pred cccHHHHHHHhHHHHHHHHHHhcccCCcccHHHHHHHHHHhhh----ccCccHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4433 35578999999999999998755 7888888862 114 99999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhcccc
Q 004485 714 LKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 745 (749)
Q Consensus 714 ~~~~~~~ma~~g~FS~drsi~eY~~~iw~~~~ 745 (749)
.++.+.|+|.+|.|||||||++|+++||++.|
T Consensus 719 ~~~~i~nia~~g~fssDrtI~~Y~~~Iw~~~~ 750 (750)
T COG0058 719 TKKAILNIANSGLFSSDRTIREYAGEIWHIGP 750 (750)
T ss_pred HHHHHHHHHHcCCCCchhHHHHHHHHhhccCC
Confidence 99999999999999999999999999999865
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=6.1e-133 Score=1169.51 Aligned_cols=569 Identities=25% Similarity=0.394 Sum_probs=492.4
Q ss_pred CCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEee-CCceeeecccccccCCCcccccCC
Q 004485 31 HVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHD 109 (749)
Q Consensus 31 ~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~-dG~Q~e~~d~W~~~~~pwe~~~~~ 109 (749)
||||..+.+. +++||||||||||||||||||||+|++||||+|++|||+|+|+ ||||+|.++.|.+.+.||+..
T Consensus 91 Fs~E~gl~~~--lpiYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~--- 165 (778)
T cd04299 91 FSMEFGLHES--LPIYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV--- 165 (778)
T ss_pred eccccccCCC--CCccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE---
Confidence 6788888777 5599999999999999999999999999999999999999999 999999999999988888741
Q ss_pred eeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhc
Q 004485 110 VVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQ 189 (749)
Q Consensus 110 ~~~~v~~~g~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~ 189 (749)
. +.+|+ +.++ .+|+||+ .+++|+|+++++ ++++|+++++.+. |...+|
T Consensus 166 -----~-------~~~G~------~~~v----~v~l~g~----~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R 213 (778)
T cd04299 166 -----R-------DADGE------PVRV----SVELPGR----TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDR 213 (778)
T ss_pred -----e-------cCCCC------eEEE----EEeeCCC----ceEEEEEEEEcC--CCCEEEecCCccc----cchhhc
Confidence 1 23453 3333 3778997 679999999975 6899999999874 478899
Q ss_pred cccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCC
Q 004485 190 QICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 269 (749)
Q Consensus 190 ~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l 269 (749)
.||++|||+|+ ++||+||+|||+||++.+ ++ .+ ++|+|||||||||||+++|+||++++++|+
T Consensus 214 ~iT~~LYg~D~-----~~Rl~Qe~~Lg~agl~~L-r~---lg--------~~pdViH~ND~Haal~~lE~~R~ll~~~g~ 276 (778)
T cd04299 214 GITDRLYGGDQ-----ETRIQQEILLGIGGVRAL-RA---LG--------IKPTVYHMNEGHAAFLGLERIRELMAEGGL 276 (778)
T ss_pred ccccCCCCCcH-----HHHHHHHHHHHHHHHHHH-HH---hC--------CCCeEEEeCCCcHHHHHHHHHHHHHHHcCC
Confidence 99999999874 779999999999999875 32 23 579999999999999999999999998899
Q ss_pred ChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCc
Q 004485 270 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPV 349 (749)
Q Consensus 270 ~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~ 349 (749)
+|++|+++++.+||||||||+|||+|+||.++++++||++++ .++++++.+..+++....+.++.
T Consensus 277 ~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~---------------~lgl~~~~~~~lg~e~~~~~~~~ 341 (778)
T cd04299 277 SFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAR---------------ELGLSRDRFLALGRENPGDDPEP 341 (778)
T ss_pred CHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHH---------------HcCCCHHHHhhhccccccCccCc
Confidence 999999999999999999999999999999999999987753 47888888888887442001247
Q ss_pred cchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCC---ccccccCCCcccccccCChhhhHHHHhhcCccccccC
Q 004485 350 VRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTN 426 (749)
Q Consensus 350 vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k---~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~ 426 (749)
|||+++||++|++|||||++|++++++ ||++++..+|.+ |.+||||||+++|+ ||+++++|.+++|+ +|.++
T Consensus 342 ~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~~~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~ 416 (778)
T cd04299 342 FNMAVLALRLAQRANGVSRLHGEVSRE-MFAGLWPGFPVEEVPIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRER 416 (778)
T ss_pred eeHHHHHHHhcCeeeeecHHHHHHHHH-HhhhhhccCCcccCceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhc
Confidence 999999999999999999999999996 888877777654 99999999999996 69999999999994 89988
Q ss_pred hhhHhhh--hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------CCCCCCCCeeEeEccccccccc
Q 004485 427 LDLLVGL--RQFADNTELQAEWESAKMASKKHLADYIWRVT-----------------GVTIDPNSLFDIQVKRIHEYKR 487 (749)
Q Consensus 427 ~~~l~~l--~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-----------------g~~~d~~~~~~~~v~R~~eyKR 487 (749)
++....+ ...++|+++ | ++|++||++|+++|++++ +.++||++||||||||||+|||
T Consensus 417 ~~~~~~~~~~~~i~d~~l---w-~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR 492 (778)
T cd04299 417 PTDPELWEAVDDIPDEEL---W-EVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKR 492 (778)
T ss_pred cchHHHHhhhcCCCcHHH---H-HHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhh
Confidence 7644333 334678776 7 899999999999998876 5569999999999999999999
Q ss_pred ccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHH
Q 004485 488 QLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSV 567 (749)
Q Consensus 488 ~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~l 567 (749)
++| ||++++||.+|+. +|. .|+||||||||||+|+.||+|||+|.++++ ||++++ ||+|+|||||++
T Consensus 493 ~~L-il~dl~rl~~il~-~~~-----~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~l 559 (778)
T cd04299 493 ATL-LLRDPERLKRLLN-DPE-----RPVQFIFAGKAHPADEPGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMAL 559 (778)
T ss_pred HHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCccchHHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHH
Confidence 999 9999999999876 433 499999999999999999999999999996 899999 999999999999
Q ss_pred HHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCC
Q 004485 568 AELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKP 647 (749)
Q Consensus 568 A~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~ 647 (749)
||+|+||||||||||+||+||||||||||||||+|++||+||||.|.+ .|.|||+||.....- +..
T Consensus 560 A~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~---~g~nGwaig~~~~~~-~~~---------- 625 (778)
T cd04299 560 ARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY---DGENGWAIGDGDEYE-DDE---------- 625 (778)
T ss_pred HHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc---CCCCceEeCCCcccc-Chh----------
Confidence 999999999999999999999999999999999999999999998765 469999999854211 100
Q ss_pred ChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHH-hhC-----HHHHHHHHHHHh
Q 004485 648 DPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA-YKD-----QKKWLKMSILST 721 (749)
Q Consensus 648 ~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~-Y~d-----~~~W~~~~~~~m 721 (749)
.-+..++++||+.|++ .|... |.. |.+|.+||+++|
T Consensus 626 --------------~~d~~da~~Ly~~Le~------------------------~i~p~yy~r~~~g~p~~W~~~~k~sm 667 (778)
T cd04299 626 --------------YQDAEEAEALYDLLEN------------------------EVIPLFYDRDEGGYPPGWVAMMKHSM 667 (778)
T ss_pred --------------hcchhhHHHHHHHHHH------------------------HHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 0013468999999972 56644 553 789999999999
Q ss_pred ccC-CCCChHHHHHHHHHHHhc
Q 004485 722 AGS-GKFSSDRTIAQYAKEIWN 742 (749)
Q Consensus 722 a~~-g~FS~drsi~eY~~~iw~ 742 (749)
+.. .+|||+||+++|.++.|.
T Consensus 668 ~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 668 ATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred HhcccCCCHHHHHHHHHHHhHH
Confidence 996 499999999999999994
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=1.7e-130 Score=1131.07 Aligned_cols=568 Identities=24% Similarity=0.389 Sum_probs=485.8
Q ss_pred CCHHHHHhhhhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEee-CCceeeecccccccCCCcccccCC
Q 004485 31 HVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHD 109 (749)
Q Consensus 31 ~~~~~~~~~e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~-dG~Q~e~~d~W~~~~~pwe~~~~~ 109 (749)
||||..+++. +++||||||||||||||||||||+|++||||+|+||||+|+|+ ||||+|.|++|...+.||+.
T Consensus 4 f~~E~g~~~~--~p~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~---- 77 (601)
T TIGR02094 4 FSMEYGLHES--LPIYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEK---- 77 (601)
T ss_pred EeeccccCCC--CCccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEE----
Confidence 6788888776 5599999999999999999999999999999999999999999 99999999999999999885
Q ss_pred eeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhc
Q 004485 110 VVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQ 189 (749)
Q Consensus 110 ~~~~v~~~g~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~ 189 (749)
| . ..+|+ . ++|++|+|| +++++|+|+++++ ++++|+++++. ++|...+|
T Consensus 78 ----~------~-~~~g~-------~---~~~~v~i~g----~~~~~rlw~~~~~--~v~lylld~~~----~~n~~~~R 126 (601)
T TIGR02094 78 ----V------L-DTDGK-------W---LKISVRIRG----RDVYAKVWRVQVG--RVPLYLLDTNI----PENSEDDR 126 (601)
T ss_pred ----E------e-cCCCC-------e---EEEEEecCC----cEEEEEEEEEEeC--CCCEEEecCCC----cccchhhc
Confidence 1 1 23453 1 478999999 4899999999964 68999999886 34577899
Q ss_pred cccccccCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCC
Q 004485 190 QICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 269 (749)
Q Consensus 190 ~It~~LY~~D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l 269 (749)
.||++|||+| +++|++||+|||+|++|++ + +.+ ++|+|||||||||||+++||||+++ ++++
T Consensus 127 ~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l-~---~l~--------~~pdviH~ND~Htal~~~el~r~l~-~~~~ 188 (601)
T TIGR02094 127 WITGRLYGGD-----KEMRIAQEIVLGIGGVRAL-R---ALG--------IDPDVYHLNEGHAAFVTLERIRELI-AQGL 188 (601)
T ss_pred CccCCCCCCC-----HHHHHHHHHHHHHHHHHHH-H---HcC--------CCceEEEeCCchHHHHHHHHHHHHH-HcCC
Confidence 9999999987 4779999999999999875 2 223 6899999999999999999999998 7799
Q ss_pred ChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCc
Q 004485 270 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPV 349 (749)
Q Consensus 270 ~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~ 349 (749)
+|++||++++.+||||||||+|||+|+||.+++.++||+. .++.+|+..++. .++.... ..+++
T Consensus 189 ~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~-~~~~gl~~~~~~--------------~~~~~~~-~~~~~ 252 (601)
T TIGR02094 189 SFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDY-AANLGLPREQLL--------------ALGRENP-DDPEP 252 (601)
T ss_pred CHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhh-hhHhCCCHHHHH--------------hhhhhcc-CccCc
Confidence 9999999999999999999999999999999999999983 444455554433 3333110 01248
Q ss_pred cchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCC---ccccccCCCcccccccCChhhhHHHHhhcCccccccC
Q 004485 350 VRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTN 426 (749)
Q Consensus 350 vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k---~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~ 426 (749)
|||+++||++|++|||||++|+++++ .+|+++++++|.+ |.|||||||+++|. ||....++.++.+ ++|.++
T Consensus 253 vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~gItNGId~~~W~---~~~~~~l~~~y~~-~~w~~~ 327 (601)
T TIGR02094 253 FNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIGYVTNGVHNPTWV---APELRDLYERYLG-ENWREL 327 (601)
T ss_pred eeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCccceeCCccccccC---CHHHHHHHHHhCC-cchhcc
Confidence 99999999999999999999999998 6899988888776 99999999999995 5667777777777 589999
Q ss_pred hhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------CCCCCeeEeEccccccccccc
Q 004485 427 LDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVT-----------------IDPNSLFDIQVKRIHEYKRQL 489 (749)
Q Consensus 427 ~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~-----------------~d~~~~~~~~v~R~~eyKR~~ 489 (749)
+++++.|.++ + ....++++++|++||++|+++|++++|.. +||++|+|+||||||+|||++
T Consensus 328 ~~~~~~~~~~-~-~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~d 405 (601)
T TIGR02094 328 LADEELWEAI-D-DIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRAD 405 (601)
T ss_pred chhhhhhhhc-c-cccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHH
Confidence 9998888775 2 22334444899999999999999876655 999999999999999999999
Q ss_pred chhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHH
Q 004485 490 LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 569 (749)
Q Consensus 490 Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~ 569 (749)
| |++++++|.+|++ ||. .|+||||+|||||+|.+||++|++|+++++ +|++++ ||+|++|||+++||
T Consensus 406 L-il~~i~~l~~i~~-~~~-----~pvq~V~~Gka~p~d~~gk~~i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~ 472 (601)
T TIGR02094 406 L-IFRDLERLARILN-NPE-----RPVQIVFAGKAHPADGEGKEIIQRIVEFSK----RPEFRG--RIVFLENYDINLAR 472 (601)
T ss_pred H-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCcccchHHHHHHHHHHHHh----cccCCC--CEEEEcCCCHHHHH
Confidence 9 9999999999876 443 499999999999999999999999999996 789999 99999999999999
Q ss_pred hhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCCh
Q 004485 570 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDP 649 (749)
Q Consensus 570 ~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~ 649 (749)
+|+||||||||+|++|+|||||||||||+||+|++||+||||+|.. ++.|||+||+..+... .
T Consensus 473 ~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~---~~~nGf~f~~~~~~~~---------~----- 535 (601)
T TIGR02094 473 YLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY---DGDNGWAIGDGEEYDD---------E----- 535 (601)
T ss_pred HHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC---CCCcEEEECCCccccc---------c-----
Confidence 9999999999999999999999999999999999999999998765 4579999997533211 0
Q ss_pred hHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHH-HHh-hC-----HHHHHHHHHHHhc
Q 004485 650 RFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVD-QAY-KD-----QKKWLKMSILSTA 722 (749)
Q Consensus 650 ~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~-~~Y-~d-----~~~W~~~~~~~ma 722 (749)
..-+++++++|++.|. ++. ..| ++ |+.|.+||+++|+
T Consensus 536 -----------~~~d~~da~~l~~~L~-------------------------~ai~~~yy~~~~~~~p~~W~~~~k~am~ 579 (601)
T TIGR02094 536 -----------EEQDRLDAEALYDLLE-------------------------NEVIPLYYDRDEKGIPADWVEMMKESIA 579 (601)
T ss_pred -----------ccccCCCHHHHHHHHH-------------------------HHHHHHHhcCCcccCcHHHHHHHHHHHh
Confidence 0113567999999997 544 665 44 6679999999999
Q ss_pred cCC-CCChHHHHHHHHHHHhc
Q 004485 723 GSG-KFSSDRTIAQYAKEIWN 742 (749)
Q Consensus 723 ~~g-~FS~drsi~eY~~~iw~ 742 (749)
..+ +|||+||+++|.+..|.
T Consensus 580 ~~~~~fsw~r~a~~Y~~~yy~ 600 (601)
T TIGR02094 580 TIAPRFSTNRMVREYVDKFYL 600 (601)
T ss_pred ccCCCCCHHHHHHHHHHHhCC
Confidence 964 89999999999998874
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-57 Score=507.63 Aligned_cols=382 Identities=20% Similarity=0.213 Sum_probs=319.5
Q ss_pred ccccccCcchhhhHHhhhhhhcccc--ccccCC-CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcE
Q 004485 168 FNLFQFNDGQYESAAQLHSRAQQIC--AVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVA 244 (749)
Q Consensus 168 ~~l~~~~~~~~~~a~~~~~~~~~It--~~LY~~-D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~v 244 (749)
+++++++++.+++ | ..+|+. |+.+ |+.+|+.|+++.+= .+ ... +.|||
T Consensus 83 v~~~lid~~~~f~-----------r~~~~~~~~~d~~~--------Rf~~F~~a~~~~~~-----~~----~~~-~~pDI 133 (487)
T COG0297 83 VDLYLIDNPALFK-----------RPDSTLYGYYDNAE--------RFAFFSLAAAELAP-----LG----LIS-WLPDI 133 (487)
T ss_pred CcEEEecChhhcC-----------ccccccCCCCcHHH--------HHHHHHHHHHHHhh-----hc----CCC-CCCCE
Confidence 7788888888876 3 356664 5544 99999999997531 11 112 68999
Q ss_pred EEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHH
Q 004485 245 VQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAM 323 (749)
Q Consensus 245 iHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~-lp~~~~ii~~in~~~~~~ 323 (749)
||+||||+||+ |.+|+.... . ....++|||+||+.+||+ |+...+..+ ||.
T Consensus 134 vH~hDWqt~L~-~~~lk~~~~--------~--~~~i~tVfTIHNl~~qG~--~~~~~~~~lgLp~--------------- 185 (487)
T COG0297 134 VHAHDWQTGLL-PAYLKQRYR--------S--GYIIPTVFTIHNLAYQGL--FRLQYLEELGLPF--------------- 185 (487)
T ss_pred EEeecHHHHHH-HHHHhhccc--------c--cccCCeEEEEeeceeecc--cchhhHHHhcCCH---------------
Confidence 99999999998 889887430 1 134679999999999999 875555543 443
Q ss_pred HHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhc-Chhhh---cCCCccccccCCCc
Q 004485 324 VRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITP 399 (749)
Q Consensus 324 ~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~-~~~~l---~p~k~~~ItNGI~~ 399 (749)
+.+. +-..+. ++++|+++.||.+|+.|||||++|++++.++.|+ +++++ ...+++||.||||.
T Consensus 186 ---------~~~~-~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~ 252 (487)
T COG0297 186 ---------EAYA-SFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDY 252 (487)
T ss_pred ---------HHhh-hceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEe
Confidence 2221 111232 3579999999999999999999999999999998 67776 36789999999999
Q ss_pred ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEc
Q 004485 400 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 479 (749)
Q Consensus 400 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v 479 (749)
..| ||+.+.++..+++ .++ + ..|.+||..|++ ++|++.+.+.|+.++|
T Consensus 253 ~~w----np~~d~~~~~~y~-----------------~~~------~-~~k~~nk~~L~~----~~gL~~~~~~pl~~~v 300 (487)
T COG0297 253 DLW----NPETDPYIAANYS-----------------AEV------L-PAKAENKVALQE----RLGLDVDLPGPLFGFV 300 (487)
T ss_pred ccc----CcccccchhccCC-----------------ccc------h-hhhHHHHHHHHH----HhCCCCCCCCcEEEEe
Confidence 999 9999999998887 444 5 469999999995 9999999999999999
Q ss_pred ccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 004485 480 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 559 (749)
Q Consensus 480 ~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF 559 (749)
+|+++||+.|| ++.+++.+++ . ..|+|+.|+|+|.++.+ +..++++ +++ ++.+
T Consensus 301 sRl~~QKG~dl-~~~~i~~~l~--~----------~~~~vilG~gd~~le~~------~~~la~~------~~~--~~~~ 353 (487)
T COG0297 301 SRLTAQKGLDL-LLEAIDELLE--Q----------GWQLVLLGTGDPELEEA------LRALASR------HPG--RVLV 353 (487)
T ss_pred eccccccchhH-HHHHHHHHHH--h----------CceEEEEecCcHHHHHH------HHHHHHh------cCc--eEEE
Confidence 99999999999 9999999976 2 48999999999999984 7999987 777 9999
Q ss_pred EcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhh
Q 004485 560 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 639 (749)
Q Consensus 560 ~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~ 639 (749)
...|++.+||+|++|||+|+|||+ +||||++||.||+||++|| +++||| ++|||.+.+
T Consensus 354 ~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpI----------v~~tGG--------LadTV~~~~-- 411 (487)
T COG0297 354 VIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPI----------VRETGG--------LADTVVDRN-- 411 (487)
T ss_pred EeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcce----------EcccCC--------ccceecCcc--
Confidence 999999999999999999999999 9999999999999999999 889999 999999743
Q ss_pred ccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHH-HHHHH
Q 004485 640 REDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK-WLKMS 717 (749)
Q Consensus 640 ~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~-W~~~~ 717 (749)
++. ....+||+ |.+.+++++..+|. +|...|.+++. |..++
T Consensus 412 ----~~~--------~~~~gtGf~f~~~~~~~l~~al~-------------------------rA~~~y~~~~~~w~~~~ 454 (487)
T COG0297 412 ----EWL--------IQGVGTGFLFLQTNPDHLANALR-------------------------RALVLYRAPPLLWRKVQ 454 (487)
T ss_pred ----chh--------ccCceeEEEEecCCHHHHHHHHH-------------------------HHHHHhhCCHHHHHHHH
Confidence 321 12468995 88889999999998 99999988777 99999
Q ss_pred HHHhccCCCCChHHHHHHHHHH
Q 004485 718 ILSTAGSGKFSSDRTIAQYAKE 739 (749)
Q Consensus 718 ~~~ma~~g~FS~drsi~eY~~~ 739 (749)
.++|.. +||||.|+.+|.+-
T Consensus 455 ~~~m~~--d~sw~~sa~~y~~l 474 (487)
T COG0297 455 PNAMGA--DFSWDLSAKEYVEL 474 (487)
T ss_pred Hhhccc--ccCchhHHHHHHHH
Confidence 999996 99999999999763
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.6e-52 Score=489.93 Aligned_cols=463 Identities=16% Similarity=0.217 Sum_probs=349.5
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..|-.=.||||--++..-++++.+|.-+.-+--.|. ++..+.+ .+ ....+. .+
T Consensus 490 E~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~-~i~~~~~-~~-----------------~~~~~~--~~----- 543 (977)
T PLN02939 490 EMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYD-CMQYDQI-RN-----------------LKVLDV--VV----- 543 (977)
T ss_pred ccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCc-ccChhhh-hc-----------------ccccce--EE-----
Confidence 4444456899999999999999999999999988887 3322111 00 000000 00
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcc---hhhhHHhhhhhhcccccccc
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG---QYESAAQLHSRAQQICAVLY 196 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~---~~~~a~~~~~~~~~It~~LY 196 (749)
.+++.| .....++|...++ ++++|+++.. .||. |..+|
T Consensus 544 ----------------------~~~~~g----~~~~~~v~~~~~~--GV~vyfId~~~~~~fF~-----------R~~iY 584 (977)
T PLN02939 544 ----------------------ESYFDG----NLFKNKIWTGTVE--GLPVYFIEPQHPSKFFW-----------RAQYY 584 (977)
T ss_pred ----------------------EEeecC----ceeEEEEEEEEEC--CeeEEEEecCCchhccC-----------CCCCC
Confidence 011111 1223578887644 5788999742 3777 77899
Q ss_pred CC-CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHh
Q 004485 197 PG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAW 275 (749)
Q Consensus 197 ~~-D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~ 275 (749)
+. |+.+ ||.|||.|+++.+.+ .+ ++||||||||||+||++|.+++.+ ...++
T Consensus 585 g~~Dn~~--------RF~~FsrAaLe~~~~----~~--------~~PDIIH~HDW~TaLV~pll~~~y-~~~~~------ 637 (977)
T PLN02939 585 GEHDDFK--------RFSYFSRAALELLYQ----SG--------KKPDIIHCHDWQTAFVAPLYWDLY-APKGF------ 637 (977)
T ss_pred CCccHHH--------HHHHHHHHHHHHHHh----cC--------CCCCEEEECCccHHHHHHHHHHHH-hhccC------
Confidence 75 6655 999999999986421 12 789999999999999866666442 21221
Q ss_pred hhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhch
Q 004485 276 DITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANL 355 (749)
Q Consensus 276 ~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~l 355 (749)
...++|||+||+.+||. ||.+.+.. +|++++.+.+....+++ .++.+|+++.
T Consensus 638 --~~~ktVfTIHNl~yQG~--f~~~~l~~-----------------------lGL~~~~l~~~d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 638 --NSARICFTCHNFEYQGT--APASDLAS-----------------------CGLDVHQLDRPDRMQDN-AHGRINVVKG 689 (977)
T ss_pred --CCCcEEEEeCCCcCCCc--CCHHHHHH-----------------------cCCCHHHccChhhhhhc-cCCchHHHHH
Confidence 33569999999999998 88776653 23333333211111210 2358999999
Q ss_pred hhhccccchhhhhHhHHHHHhhhhc-Chhhhc---CCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 356 CVVSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 356 ai~~S~~VNgVS~~h~ei~~~~~f~-~~~~l~---p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
||++|+.|+|||++|++++++ .++ ++++++ +.++.+|.||||+..| ||..+++|+..|+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~w----nPatD~~L~~~Ys------------ 752 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTW----NPSTDRFLKVQYN------------ 752 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhc----CCccccccccccC------------
Confidence 999999999999999999887 676 676653 7789999999999999 9999999999998
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCcccc
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 510 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d-~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~ 510 (749)
++| + ++|..||.+|. +++|++.+ ++.+++++|+|++++||.++ ++.++.++.+ .
T Consensus 753 -----~~d------l-~GK~~nK~aLR----kelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~--~------ 807 (977)
T PLN02939 753 -----AND------L-QGKAANKAALR----KQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAE--L------ 807 (977)
T ss_pred -----hhh------h-hhhhhhhHHHH----HHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhh--c------
Confidence 566 7 79999999988 49998754 78899999999999999999 9998877653 1
Q ss_pred CCCCCeEEEEEecC-CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCC
Q 004485 511 KKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS 589 (749)
Q Consensus 511 ~~~~p~q~If~GKa-~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~Eas 589 (749)
++|||++|.| .+.++. .+.++++.+. ..+ +|.|+..|+..+++.+++|||++++||+ +|||
T Consensus 808 ----dvqLVIvGdGp~~~~e~------eL~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EPf 869 (977)
T PLN02939 808 ----GGQFVLLGSSPVPHIQR------EFEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEPC 869 (977)
T ss_pred ----CCEEEEEeCCCcHHHHH------HHHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCC
Confidence 5799999998 454443 4566676532 345 8999999999999999999999999999 9999
Q ss_pred CcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCCh
Q 004485 590 GTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDY 668 (749)
Q Consensus 590 GTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~ 668 (749)
|+++|.||.+|++||++ .+|| +.|+|.+++. ... + ...++|+ |.+.|.
T Consensus 870 GLvqLEAMAyGtPPVVs----------~vGG--------L~DtV~d~d~------e~i-~------~eg~NGfLf~~~D~ 918 (977)
T PLN02939 870 GLTQMIAMRYGSVPIVR----------KTGG--------LNDSVFDFDD------ETI-P------VELRNGFTFLTPDE 918 (977)
T ss_pred cHHHHHHHHCCCCEEEe----------cCCC--------CcceeecCCc------ccc-c------cCCCceEEecCCCH
Confidence 99999999999999944 7888 8888875321 100 0 0236785 888899
Q ss_pred HHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHh-hCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 004485 669 NPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY-KDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 741 (749)
Q Consensus 669 ~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y-~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw 741 (749)
++|.++|. ++...| .|++.|.+|+.++|+. +|||++++++|.+ +|
T Consensus 919 eaLa~AL~-------------------------rAL~~~~~dpe~~~~L~~~am~~--dFSWe~~A~qYee-LY 964 (977)
T PLN02939 919 QGLNSALE-------------------------RAFNYYKRKPEVWKQLVQKDMNI--DFSWDSSASQYEE-LY 964 (977)
T ss_pred HHHHHHHH-------------------------HHHHHhccCHHHHHHHHHHHHHh--cCCHHHHHHHHHH-HH
Confidence 99999997 888766 6799999999999987 8999999999964 44
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=9.3e-50 Score=453.66 Aligned_cols=456 Identities=18% Similarity=0.256 Sum_probs=345.7
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..+=.=.||||--+|..=++++.+|.-+.-+--+|+. +.+. .+|.. + ....
T Consensus 14 E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~-~~~~----~~~~~--~---------------~~~~------ 65 (489)
T PRK14098 14 EVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGT-INDR----KFRLH--D---------------VLRL------ 65 (489)
T ss_pred cchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCc-hhhh----hhccc--c---------------ceEE------
Confidence 33344567999999999999999999988888777753 2111 11110 0 0000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCC-
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG- 198 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~- 198 (749)
..+++++.+ .+...+++.+..+..++++|+++++.||+ |..+|++
T Consensus 66 -------------------~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~f~-----------r~~~y~~~ 111 (489)
T PRK14098 66 -------------------SDIEVPLKE----KTDLLHVKVTALPSSKIQTYFLYNEKYFK-----------RNGLFTDM 111 (489)
T ss_pred -------------------EEEEEeecC----eeEEEEEEEecccCCCceEEEEeCHHHcC-----------CCCcCCCC
Confidence 001111111 12233444443333357889999999998 7789974
Q ss_pred -------CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCCh
Q 004485 199 -------DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGW 271 (749)
Q Consensus 199 -------D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~ 271 (749)
|+.+ |+.|||.|+++.+ ++.+ ++||+|||||||+|++ |.+++..+...
T Consensus 112 ~~g~~~~d~~~--------rf~~f~~a~l~~~----~~~~--------~~pDiiH~hdw~t~l~-~~~l~~~~~~~---- 166 (489)
T PRK14098 112 SLGGDLKGSAE--------KVIFFNVGVLETL----QRLG--------WKPDIIHCHDWYAGLV-PLLLKTVYADH---- 166 (489)
T ss_pred ccCCCCCcHHH--------HHHHHHHHHHHHH----HhcC--------CCCCEEEecCcHHHHH-HHHHHHHhhhc----
Confidence 5555 9999999999753 1122 6899999999999998 67887654321
Q ss_pred HHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccc
Q 004485 272 DEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVR 351 (749)
Q Consensus 272 ~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vn 351 (749)
..+ .+.++|||+||+.+||. ||...+..++|... +.. .+. ..+.+|
T Consensus 167 -~~~--~~~~~V~TiHn~~~qg~--~~~~~~~~~~~~~~------------------------~~~---~~~--~~~~~n 212 (489)
T PRK14098 167 -EFF--KDIKTVLTIHNVYRQGV--LPFKVFQKLLPEEV------------------------CSG---LHR--EGDEVN 212 (489)
T ss_pred -ccc--CCCCEEEEcCCCcccCC--CCHHHHHHhCCHHh------------------------hhh---hhh--cCCccc
Confidence 111 34679999999999997 88877665555321 000 011 124799
Q ss_pred hhchhhhccccchhhhhHhHHHHHhh-hhc-Chhhh---cCCCccccccCCCcccccccCChhhhHHHHhhcCccccccC
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKAD-LFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTN 426 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~-~f~-~~~~l---~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~ 426 (749)
+++.|+..||.|+|||+.|++++++. .++ ++.++ .+.++.+|.||||+..| ||..++.+.+.++
T Consensus 213 ~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~----~p~~d~~~~~~~~------- 281 (489)
T PRK14098 213 MLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQW----NPSTDKLIKKRYS------- 281 (489)
T ss_pred HHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccccc----CCcccccccccCC-------
Confidence 99999999999999999999988763 444 45444 36799999999999999 8998888888887
Q ss_pred hhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcC
Q 004485 427 LDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS 506 (749)
Q Consensus 427 ~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~ 506 (749)
+++ + +.|..||..|+ +++|++.+++.+++++++|++++|+.++ ++.++.++.+ .
T Consensus 282 ----------~~~------~-~~k~~~k~~l~----~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~--~-- 335 (489)
T PRK14098 282 ----------IER------L-DGKLENKKALL----EEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVE--L-- 335 (489)
T ss_pred ----------cch------h-hhHHHHHHHHH----HHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHh--c--
Confidence 444 6 68999999998 4899998999999999999999999999 9999887653 1
Q ss_pred ccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc
Q 004485 507 PQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM 586 (749)
Q Consensus 507 ~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~ 586 (749)
++||+++|+|.+.++. .+.++++. +++ +|.|+..|+.++++.++++||++++||+ +
T Consensus 336 --------~~~lvivG~G~~~~~~------~l~~l~~~------~~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~ 391 (489)
T PRK14098 336 --------DIQLVICGSGDKEYEK------RFQDFAEE------HPE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--I 391 (489)
T ss_pred --------CcEEEEEeCCCHHHHH------HHHHHHHH------CCC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--C
Confidence 6899999998765543 56777764 455 8999999999999999999999999999 9
Q ss_pred cCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCC
Q 004485 587 EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGS 665 (749)
Q Consensus 587 EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~ 665 (749)
|+||+++|.||++|+++|++ .+|| +.|+|.++.. ..++|+ |.+
T Consensus 392 E~~Gl~~lEAma~G~ppVv~----------~~GG--------l~d~v~~~~~------------------~~~~G~l~~~ 435 (489)
T PRK14098 392 ESCGMLQMFAMSYGTIPVAY----------AGGG--------IVETIEEVSE------------------DKGSGFIFHD 435 (489)
T ss_pred CCchHHHHHHHhCCCCeEEe----------cCCC--------CceeeecCCC------------------CCCceeEeCC
Confidence 99999999999999999955 6788 7788764321 125775 788
Q ss_pred CChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 004485 666 YDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 741 (749)
Q Consensus 666 ~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw 741 (749)
.|.++|.++|. ++...|.|++.|.+++.++|+. +|||++++++|. ++|
T Consensus 436 ~d~~~la~ai~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~y~-~lY 483 (489)
T PRK14098 436 YTPEALVAKLG-------------------------EALALYHDEERWEELVLEAMER--DFSWKNSAEEYA-QLY 483 (489)
T ss_pred CCHHHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhcC--CCChHHHHHHHH-HHH
Confidence 88999999997 8888999999999999999987 899999999995 444
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.7e-47 Score=433.08 Aligned_cols=452 Identities=17% Similarity=0.203 Sum_probs=340.4
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|.-+-.=.||||--+|..=++++.+|.-+.-+--+|+. +. ++. ++.+
T Consensus 12 E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~-~~-~~~-~~~~------------------------------ 58 (485)
T PRK14099 12 EIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPA-VL-AGI-EDAE------------------------------ 58 (485)
T ss_pred ccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcc-hh-hhh-cCce------------------------------
Confidence 34445668999999999999999999888888777743 31 110 0000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhcccccc-ccCC
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAV-LYPG 198 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~-LY~~ 198 (749)
.+.. +.++. |. .+++|.+.++ ++++|+++++.||+ |.. +|++
T Consensus 59 ---------------~~~~--~~~~~-~~------~~~~~~~~~~--~v~~~~~~~~~~f~-----------r~~~~y~~ 101 (485)
T PRK14099 59 ---------------QVHS--FPDLF-GG------PARLLAARAG--GLDLFVLDAPHLYD-----------RPGNPYVG 101 (485)
T ss_pred ---------------EEEE--EeeeC-Cc------eEEEEEEEeC--CceEEEEeChHhhC-----------CCCCCCCC
Confidence 0000 01111 11 3567887644 68899999999997 664 7853
Q ss_pred -------CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCCh
Q 004485 199 -------DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGW 271 (749)
Q Consensus 199 -------D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~ 271 (749)
||.+ ||.|||.|+++.+ +. +..-++|||||+||||++++ |.+++..
T Consensus 102 ~~~~~~~d~~~--------rf~~f~~a~~~~~-~~---------~~~~~~pDIiH~Hdw~~~l~-~~~l~~~-------- 154 (485)
T PRK14099 102 PDGKDWPDNAQ--------RFAALARAAAAIG-QG---------LVPGFVPDIVHAHDWQAGLA-PAYLHYS-------- 154 (485)
T ss_pred ccCCCCCcHHH--------HHHHHHHHHHHHH-hh---------hccCCCCCEEEECCcHHHHH-HHHHHhC--------
Confidence 5555 9999999999753 11 10116899999999999997 6666531
Q ss_pred HHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccc
Q 004485 272 DEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVR 351 (749)
Q Consensus 272 ~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vn 351 (749)
...+.++|+|+||+.+||. |+..++..+ +++++.+...+ .+. .+.+|
T Consensus 155 ----~~~~~~~V~TiHn~~~qg~--~~~~~~~~~-----------------------~~~~~~~~~~~-~~~---~~~~~ 201 (485)
T PRK14099 155 ----GRPAPGTVFTIHNLAFQGQ--FPRELLGAL-----------------------GLPPSAFSLDG-VEY---YGGIG 201 (485)
T ss_pred ----CCCCCCEEEeCCCCCCCCc--CCHHHHHHc-----------------------CCChHHcCchh-hhh---CCCcc
Confidence 0123569999999999998 887766543 22222221111 121 34789
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhc-Chhhh---cCCCccccccCCCcccccccCChhhhHHHHhhcCccccccCh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNL 427 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~-~~~~l---~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~ 427 (749)
+++.++..|+.|+|||+.|++++++..++ +++++ .+.++.+|.||||+..| ||..++.+..+++
T Consensus 202 ~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~~-------- 269 (485)
T PRK14099 202 YLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVW----NPATDELIAATYD-------- 269 (485)
T ss_pred HHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhc----cccccchhhhcCC--------
Confidence 99999999999999999999988866554 55443 36789999999999999 9999999988887
Q ss_pred hhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCc
Q 004485 428 DLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSP 507 (749)
Q Consensus 428 ~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~ 507 (749)
+++ + +.|..||..|. +++|++.+++.+++++|+|++++|+.++ ++.++.++.+ .
T Consensus 270 ---------~~~------~-~~k~~~k~~l~----~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~--~--- 323 (485)
T PRK14099 270 ---------VET------L-AARAANKAALQ----ARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLG--E--- 323 (485)
T ss_pred ---------hhH------H-HhHHHhHHHHH----HHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHh--c---
Confidence 344 5 68999999887 4899988888999999999999999999 9999887653 1
Q ss_pred cccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCcc
Q 004485 508 QERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 587 (749)
Q Consensus 508 ~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~E 587 (749)
++++|++|.|.+.++. .+.++++. .++ +++++.+|+.++++.++++||++++||+ +|
T Consensus 324 -------~~~lvivG~G~~~~~~------~l~~l~~~------~~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E 380 (485)
T PRK14099 324 -------GAQLALLGSGDAELEA------RFRAAAQA------YPG--QIGVVIGYDEALAHLIQAGADALLVPSR--FE 380 (485)
T ss_pred -------CcEEEEEecCCHHHHH------HHHHHHHH------CCC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cC
Confidence 5799999998765543 45666654 445 7878889999999999999999999999 99
Q ss_pred CCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCC
Q 004485 588 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSY 666 (749)
Q Consensus 588 asGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~ 666 (749)
+||+++|.||.+|++||.| .+|| +.|+|.+.+. .. +. ...++|+ |.+.
T Consensus 381 ~fGl~~lEAma~G~ppVvs----------~~GG--------l~d~V~~~~~------~~---~~----~~~~~G~l~~~~ 429 (485)
T PRK14099 381 PCGLTQLCALRYGAVPVVA----------RVGG--------LADTVVDANE------MA---IA----TGVATGVQFSPV 429 (485)
T ss_pred CCcHHHHHHHHCCCCcEEe----------CCCC--------ccceeecccc------cc---cc----cCCCceEEeCCC
Confidence 9999999999999999944 6888 8888864210 00 00 0115785 8888
Q ss_pred ChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 004485 667 DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 741 (749)
Q Consensus 667 ~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw 741 (749)
|.++|.++|. ++..+|.|++.|.+|..++|+. +|||++++++|.+ +|
T Consensus 430 d~~~La~ai~-------------------------~a~~l~~d~~~~~~l~~~~~~~--~fSw~~~a~~y~~-lY 476 (485)
T PRK14099 430 TADALAAALR-------------------------KTAALFADPVAWRRLQRNGMTT--DVSWRNPAQHYAA-LY 476 (485)
T ss_pred CHHHHHHHHH-------------------------HHHHHhcCHHHHHHHHHHhhhh--cCChHHHHHHHHH-HH
Confidence 9999999997 8888899999999999999987 8999999999964 44
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=5.8e-45 Score=411.42 Aligned_cols=454 Identities=18% Similarity=0.216 Sum_probs=341.0
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..+-.-.||||.-.++.-++++.+|.-+.-+.-+|.... +.++ .. + .+.
T Consensus 9 E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~------~~~~-----------~~--~-------~~~---- 58 (473)
T TIGR02095 9 EMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE------DEVD-----------DQ--V-------KVV---- 58 (473)
T ss_pred ccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh------hhhc-----------cC--e-------EEE----
Confidence 4445567999999999999999999999999999888642 1000 00 0 000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhcccc-ccccCC
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQIC-AVLYPG 198 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It-~~LY~~ 198 (749)
....+++.| ...++++|...++ ++++|+++++.|++ + ..+|++
T Consensus 59 -------------------~~~~~~~~~----~~~~~~~~~~~~~--~v~~~~i~~~~~~~-----------r~~~~y~~ 102 (473)
T TIGR02095 59 -------------------ELVDLSVGP----RTLYVKVFEGVVE--GVPVYFIDNPSLFD-----------RPGGIYGD 102 (473)
T ss_pred -------------------EEEEEeecC----ceeEEEEEEEEEC--CceEEEEECHHHcC-----------CCCCCCCC
Confidence 001122222 2556788887653 68899999988886 5 359984
Q ss_pred CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhc
Q 004485 199 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 278 (749)
Q Consensus 199 D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~ 278 (749)
|. .-.+.|+.+|+.|+++.+.+ .+ .+||+||+||||++++ +.+++..... .
T Consensus 103 ~~-----~d~~~r~~~f~~a~~~~~~~----~~--------~~~DiiH~hdw~~~~~-~~~l~~~~~~-----------~ 153 (473)
T TIGR02095 103 DY-----PDNAERFAFFSRAAAELLSG----LG--------WQPDVVHAHDWHTALV-PALLKAVYRP-----------N 153 (473)
T ss_pred CC-----CCHHHHHHHHHHHHHHHHHh----cC--------CCCCEEEECCcHHHHH-HHHHHhhccC-----------C
Confidence 11 11234889999999875421 12 5899999999999998 5667643210 1
Q ss_pred cceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhh
Q 004485 279 TRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 358 (749)
Q Consensus 279 ~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~ 358 (749)
+.++|||+||+.+||. ||...+..+ ++++..+.... .+. .+.+||++.++.
T Consensus 154 ~~~~v~TiH~~~~~g~--~~~~~~~~~-----------------------~~~~~~~~~~~-~~~---~~~~~~~k~~~~ 204 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGV--FPADDFSEL-----------------------GLPPEYFHMEG-LEF---YGRVNFLKGGIV 204 (473)
T ss_pred CCCEEEEcCCCccCCc--CCHHHHHHc-----------------------CCChHHcCchh-hhc---CCchHHHHHHHH
Confidence 3679999999999996 887665532 22222121111 121 247999999999
Q ss_pred ccccchhhhhHhHHHHHhhhhc-Chhhh---cCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhh
Q 004485 359 SAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 434 (749)
Q Consensus 359 ~S~~VNgVS~~h~ei~~~~~f~-~~~~l---~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~ 434 (749)
.|++|++||+.|++++++..++ +++.+ .+.++..|.||||+..| ||+.++.+...++
T Consensus 205 ~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~--------------- 265 (473)
T TIGR02095 205 YADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVW----NPATDPYLKANYS--------------- 265 (473)
T ss_pred hCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCcccc----CCCCCcccccCcC---------------
Confidence 9999999999999988765555 44433 46799999999999999 8998888877776
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCC
Q 004485 435 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 514 (749)
Q Consensus 435 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~ 514 (749)
+++ + +.|..+|..|. +++|++.+++.++++++.|+.++||.++ ++.++.++.+ .
T Consensus 266 --~~~------~-~~k~~~k~~l~----~~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~---------- 319 (473)
T TIGR02095 266 --ADD------L-AGKAENKEALQ----EELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPELLE--L---------- 319 (473)
T ss_pred --ccc------h-hhhhhhHHHHH----HHcCCCccCCCCEEEEEecCccccChHH-HHHHHHHHHH--c----------
Confidence 334 5 68888888887 5899987778999999999999999999 9999888754 2
Q ss_pred CeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchh
Q 004485 515 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594 (749)
Q Consensus 515 p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~M 594 (749)
+++++++|+++|.+.. .+.++++. .++ ++.|..+|+.++++.++++||++++||+ +|+||+++|
T Consensus 320 ~~~lvi~G~g~~~~~~------~l~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~l 383 (473)
T TIGR02095 320 GGQLVVLGTGDPELEE------ALRELAER------YPG--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQL 383 (473)
T ss_pred CcEEEEECCCCHHHHH------HHHHHHHH------CCC--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHH
Confidence 5899999999876553 45666654 445 7999999999999999999999999999 999999999
Q ss_pred hHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHH
Q 004485 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLD 673 (749)
Q Consensus 595 ka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~ 673 (749)
.||.+|+++|++ .+|| ..|+|.+.+ +.. ..++|. |.+.++++|.+
T Consensus 384 EAma~G~pvI~s----------~~gg--------~~e~v~~~~------~~~----------~~~~G~l~~~~d~~~la~ 429 (473)
T TIGR02095 384 YAMRYGTVPIVR----------RTGG--------LADTVVDGD------PEA----------ESGTGFLFEEYDPGALLA 429 (473)
T ss_pred HHHHCCCCeEEc----------cCCC--------ccceEecCC------CCC----------CCCceEEeCCCCHHHHHH
Confidence 999999999955 6677 677775321 110 125674 77888999999
Q ss_pred HHhcCCCCCCCccccccCCchHHHHHHHHHHHHhh-CHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 004485 674 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK-DQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 739 (749)
Q Consensus 674 ~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~-d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~ 739 (749)
+|. ++...|. |++.|.+|..++|+. +|||++++++|.+-
T Consensus 430 ~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~ 469 (473)
T TIGR02095 430 ALS-------------------------RALRLYRQDPSLWEALQKNAMSQ--DFSWDKSAKQYVEL 469 (473)
T ss_pred HHH-------------------------HHHHHHhcCHHHHHHHHHHHhcc--CCCcHHHHHHHHHH
Confidence 997 8888776 999999999999987 89999999999753
No 15
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.6e-44 Score=408.06 Aligned_cols=444 Identities=19% Similarity=0.225 Sum_probs=333.0
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..+-.-.||||.-.+..-++++.+|..+.-+.-+|..- . +. .++ .. .+.
T Consensus 9 e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~-~-----~~----~~~----------~~------~~~---- 58 (466)
T PRK00654 9 ECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAI-R-----EK----LRD----------AQ------VVG---- 58 (466)
T ss_pred ccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcch-h-----hh----hcC----------ce------EEE----
Confidence 444455689999999999999999999999888777531 1 10 000 00 000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCC-
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG- 198 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~- 198 (749)
.+ + ..++|......+++++|+++++.|++ +..+|+.
T Consensus 59 ------------------~~--~------------~~~~~~~~~~~~gv~v~~v~~~~~~~-----------~~~~y~~~ 95 (466)
T PRK00654 59 ------------------RL--D------------LFTVLFGHLEGDGVPVYLIDAPHLFD-----------RPSGYGYP 95 (466)
T ss_pred ------------------Ee--e------------eEEEEEEeEEcCCceEEEEeCHHHcC-----------CCCCCCCc
Confidence 00 0 13444443223457788888888887 7789984
Q ss_pred CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhc
Q 004485 199 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 278 (749)
Q Consensus 199 D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~ 278 (749)
|+.+ |+.|||.|+++.+ + +.+ ++||+||+||||+|++ +.+++..+ ..+ ..
T Consensus 96 d~~~--------r~~~f~~~~~~~~-~---~~~--------~~pDiiH~h~w~~~~~-~~~l~~~~-~~~--------~~ 145 (466)
T PRK00654 96 DNGE--------RFAFFSWAAAEFA-E---GLD--------PRPDIVHAHDWHTGLI-PALLKEKY-WRG--------YP 145 (466)
T ss_pred ChHH--------HHHHHHHHHHHHH-H---hcC--------CCCceEEECCcHHHHH-HHHHHHhh-hcc--------CC
Confidence 6655 8889999999753 1 122 5899999999999998 56666432 111 13
Q ss_pred cceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhh
Q 004485 279 TRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 358 (749)
Q Consensus 279 ~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~ 358 (749)
+..+|||+||+.+||. |+.+.+..+ +++++.+. ....+. ++.+|+++.++.
T Consensus 146 ~~~~v~TiH~~~~~g~--~~~~~~~~~-----------------------~~~~~~~~-~~~~~~---~~~~~~~~~~~~ 196 (466)
T PRK00654 146 DIKTVFTIHNLAYQGL--FPAEILGEL-----------------------GLPAEAFH-LEGLEF---YGQISFLKAGLY 196 (466)
T ss_pred CCCEEEEcCCCcCCCc--CCHHHHHHc-----------------------CCChHHcC-chhhhc---CCcccHHHHHHH
Confidence 4679999999999997 877666532 22222111 111121 236899999999
Q ss_pred ccccchhhhhHhHHHHHhhhhc-Chhhh---cCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhh
Q 004485 359 SAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 434 (749)
Q Consensus 359 ~S~~VNgVS~~h~ei~~~~~f~-~~~~l---~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~ 434 (749)
.|+.|++||+.|++++++..++ ++.++ .+.|+..|.||||+..| ||..++.+...++
T Consensus 197 ~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~----~p~~~~~~~~~~~--------------- 257 (466)
T PRK00654 197 YADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIW----NPETDPLLAANYS--------------- 257 (466)
T ss_pred hcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCcccc----CCccCcccccccC---------------
Confidence 9999999999999988866665 45433 46789999999999999 8998888887776
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCC
Q 004485 435 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 514 (749)
Q Consensus 435 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~ 514 (749)
..+ + +.|..+|.+|. +++|++ +++.++++++.|++++||.++ ++.++.++.+ .
T Consensus 258 --~~~------~-~~k~~~k~~l~----~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~--~---------- 310 (466)
T PRK00654 258 --ADD------L-EGKAENKRALQ----ERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPELLE--Q---------- 310 (466)
T ss_pred --hhh------h-hchHHHHHHHH----HHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHHHh--c----------
Confidence 333 6 68888998887 488987 457899999999999999999 9998887653 1
Q ss_pred CeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchh
Q 004485 515 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594 (749)
Q Consensus 515 p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~M 594 (749)
+++++++|.+++.+.. .+.++++. +++ +|+|..+|+.++++.++++||++++||+ +|+||+++|
T Consensus 311 ~~~lvivG~g~~~~~~------~l~~l~~~------~~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~l 374 (466)
T PRK00654 311 GGQLVLLGTGDPELEE------AFRALAAR------YPG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQL 374 (466)
T ss_pred CCEEEEEecCcHHHHH------HHHHHHHH------CCC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHH
Confidence 5899999998775543 45666664 445 7888899999999999999999999999 999999999
Q ss_pred hHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHH
Q 004485 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLD 673 (749)
Q Consensus 595 ka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~ 673 (749)
.||.+|+++|+| .+|| ..|+|.+.+ ... ..++|. |.+.|+++|.+
T Consensus 375 EAma~G~p~V~~----------~~gG--------~~e~v~~~~------~~~----------~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 375 YALRYGTLPIVR----------RTGG--------LADTVIDYN------PED----------GEATGFVFDDFNAEDLLR 420 (466)
T ss_pred HHHHCCCCEEEe----------CCCC--------ccceeecCC------CCC----------CCCceEEeCCCCHHHHHH
Confidence 999999999955 6777 777775321 000 125674 78888999999
Q ss_pred HHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 004485 674 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 738 (749)
Q Consensus 674 ~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~ 738 (749)
+|. ++...|.+++.|.+|..++|+. +|||++++++|.+
T Consensus 421 ~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~ 458 (466)
T PRK00654 421 ALR-------------------------RALELYRQPPLWRALQRQAMAQ--DFSWDKSAEEYLE 458 (466)
T ss_pred HHH-------------------------HHHHHhcCHHHHHHHHHHHhcc--CCChHHHHHHHHH
Confidence 997 8888888999999999999986 8999999999965
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=7.8e-44 Score=400.73 Aligned_cols=462 Identities=19% Similarity=0.230 Sum_probs=340.6
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..+-.-.||||...++.-++++.+|..+.-+.-+|....- .++. .++ ....
T Consensus 8 E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~------~~~~-------------~~~-----~~~~---- 59 (476)
T cd03791 8 EVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILD------ELRG-------------QLL-----VLRL---- 59 (476)
T ss_pred cccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhh------Hhcc-------------CeE-----EEEE----
Confidence 44445589999999999999999999999999998886531 1000 000 0000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCCC
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD 199 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~D 199 (749)
+.+++.+ ....+++|...+ .++++|+++++.++. +..+|+..
T Consensus 60 ---------------------~~~~~~~----~~~~~~~~~~~~--~gv~~~~l~~~~~~~-----------~~~~~~~~ 101 (476)
T cd03791 60 ---------------------FGVPVGG----RPEYVGVFELPV--DGVPVYFLDNPDYFD-----------RPGLYDDS 101 (476)
T ss_pred ---------------------EeeccCC----ceeEEEEEEEEe--CCceEEEEcChHHcC-----------CCCCCCcc
Confidence 0111122 245567887764 357888888887775 44444210
Q ss_pred CchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhcc
Q 004485 200 STEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT 279 (749)
Q Consensus 200 ~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~ 279 (749)
..+-..+..++.+|+.|+++.+.+ .+ .+||+||+||||++++ +.+++..... . ...+
T Consensus 102 --~~~~~~~~~~~~~f~~~~~~~l~~----~~--------~~pDviH~hd~~t~~~-~~~l~~~~~~------~--~~~~ 158 (476)
T cd03791 102 --GYDYEDNAERFALFSRAALELLRR----LG--------WKPDIIHCHDWHTGLV-PALLKEKYAD------P--FFKN 158 (476)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHh----cC--------CCCcEEEECchHHHHH-HHHHHHhhcc------c--cCCC
Confidence 001112456899999999875321 12 6899999999999998 5666644321 0 1245
Q ss_pred ceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhc
Q 004485 280 RTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVS 359 (749)
Q Consensus 280 ~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~ 359 (749)
.++|||+||+.++|. |+...+.... ..++........+ ....+||.+.++..
T Consensus 159 ~~~v~tiH~~~~~g~--~~~~~~~~~~-----------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 210 (476)
T cd03791 159 IKTVFTIHNLAYQGV--FPLEALEDLG-----------------------LPWEELFHIDGLE---FYGQVNFLKAGIVY 210 (476)
T ss_pred CCEEEEeCCCCCCCC--CCHHHHHHcC-----------------------CCccchhhhcccc---cCCcccHHHHHHHh
Confidence 679999999999997 8776655331 1110000111111 13479999999999
Q ss_pred cccchhhhhHhHHHHHhhhhc-Chhhhc---CCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 004485 360 AHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 435 (749)
Q Consensus 360 S~~VNgVS~~h~ei~~~~~f~-~~~~l~---p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 435 (749)
|+.|++||+.|++++++..++ +++.+. +.++..|+||||...| +|..++.+...+.
T Consensus 211 ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~---------------- 270 (476)
T cd03791 211 ADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVW----NPATDPHLPANYS---------------- 270 (476)
T ss_pred cCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCccc----CccccchhhhcCC----------------
Confidence 999999999999988876555 455442 5789999999999999 8888887776665
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCC
Q 004485 436 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 515 (749)
Q Consensus 436 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p 515 (749)
.++ + +.|..+|.+|. +++|++.+++.+++++++|+.++||.++ ++.++.++.+ . +
T Consensus 271 -~~~------~-~~~~~~k~~l~----~~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~ 325 (476)
T cd03791 271 -ADD------L-EGKAENKAALQ----EELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPELLE--L----------G 325 (476)
T ss_pred -ccc------c-ccHHHHHHHHH----HHcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHHHHH--c----------C
Confidence 222 5 68899999988 4999887899999999999999999999 9998887754 2 5
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhh
Q 004485 516 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 595 (749)
Q Consensus 516 ~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mk 595 (749)
++|+++|++++.+.. .+.++++. .++ +|+|+.+|+.++++.++++||++++||+ +||||+++|.
T Consensus 326 ~~lvi~G~g~~~~~~------~~~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lE 389 (476)
T cd03791 326 GQLVILGSGDPEYEE------ALRELAAR------YPG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMY 389 (476)
T ss_pred cEEEEEecCCHHHHH------HHHHHHHh------CCC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHH
Confidence 899999999765443 55666654 345 8999999999999999999999999999 9999999999
Q ss_pred HhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHH
Q 004485 596 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDS 674 (749)
Q Consensus 596 a~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~~ 674 (749)
||.+|+++|++ .+|| ..|+|.+.. +.. ..++|. |.+.+.++|.++
T Consensus 390 Ama~G~pvI~~----------~~gg--------~~e~v~~~~------~~~----------~~~~G~~~~~~~~~~l~~~ 435 (476)
T cd03791 390 AMRYGTVPIVR----------ATGG--------LADTVIDYN------EDT----------GEGTGFVFEGYNADALLAA 435 (476)
T ss_pred HhhCCCCCEEC----------cCCC--------ccceEeCCc------CCC----------CCCCeEEeCCCCHHHHHHH
Confidence 99999999965 6777 677775421 100 135774 778889999999
Q ss_pred HhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 004485 675 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 740 (749)
Q Consensus 675 l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~i 740 (749)
|. ++...|.+++.|.++++++++. .|||++++++|.+..
T Consensus 436 i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~y 474 (476)
T cd03791 436 LR-------------------------RALALYRDPEAWRKLQRNAMAQ--DFSWDRSAKEYLELY 474 (476)
T ss_pred HH-------------------------HHHHHHcCHHHHHHHHHHHhcc--CCChHHHHHHHHHHH
Confidence 97 8888899999999999999998 799999999998753
No 17
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.6e-42 Score=414.54 Aligned_cols=430 Identities=17% Similarity=0.222 Sum_probs=315.3
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 119 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e~~d~W~~~~~pwe~~~~~~~~~v~~~g~ 119 (749)
|..|-.=.||||.-.+..-++++.+|.-+.-+.-.|.. +....+.+ + ...+.
T Consensus 596 E~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~-i~~~~~~~------------------~-----~~~~~---- 647 (1036)
T PLN02316 596 EMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDC-LNLSHVKD------------------L-----HYQRS---- 647 (1036)
T ss_pred ccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcc-cchhhccc------------------c-----eEEEE----
Confidence 44444457999999999999999999988888888873 21110000 0 00000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcc-hhhhHHhhhhhhccccccccCC
Q 004485 120 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG-QYESAAQLHSRAQQICAVLYPG 198 (749)
Q Consensus 120 ~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~-~~~~a~~~~~~~~~It~~LY~~ 198 (749)
| +..| ..+++|...++ ++++|++++. .+|. +..+|+.
T Consensus 648 ---------------------~--~~~~------~~~~v~~~~~~--GV~vyfl~~~~~~F~-----------r~~~Yg~ 685 (1036)
T PLN02316 648 ---------------------Y--SWGG------TEIKVWFGKVE--GLSVYFLEPQNGMFW-----------AGCVYGC 685 (1036)
T ss_pred ---------------------e--ccCC------EEEEEEEEEEC--CcEEEEEeccccccC-----------CCCCCCc
Confidence 0 0011 12456665533 4677777764 4665 5668874
Q ss_pred -CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhh
Q 004485 199 -DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDI 277 (749)
Q Consensus 199 -D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~ 277 (749)
|+.+ +|.|||.|+++.+.+ .+ +.||||||||||+|++ +.+++..+...+ .
T Consensus 686 ~Dd~~--------RF~~F~~Aale~l~~----~~--------~~PDIIHaHDW~talv-a~llk~~~~~~~--------~ 736 (1036)
T PLN02316 686 RNDGE--------RFGFFCHAALEFLLQ----SG--------FHPDIIHCHDWSSAPV-AWLFKDHYAHYG--------L 736 (1036)
T ss_pred hhHHH--------HHHHHHHHHHHHHHh----cC--------CCCCEEEECCChHHHH-HHHHHHhhhhhc--------c
Confidence 6665 999999999986421 22 6899999999999998 667776543222 1
Q ss_pred ccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhh
Q 004485 278 TTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCV 357 (749)
Q Consensus 278 ~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai 357 (749)
.+..+|||+||+.+++ |+++.++
T Consensus 737 ~~~p~V~TiHnl~~~~---------------------------------------------------------n~lk~~l 759 (1036)
T PLN02316 737 SKARVVFTIHNLEFGA---------------------------------------------------------NHIGKAM 759 (1036)
T ss_pred CCCCEEEEeCCcccch---------------------------------------------------------hHHHHHH
Confidence 4467999999876432 2233467
Q ss_pred hccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 004485 358 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 437 (749)
Q Consensus 358 ~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~ 437 (749)
..|+.|+|||+.|++++.+. +.+ ...+.|+.+|.||||+..| ||..+++++..|+ +
T Consensus 760 ~~AD~ViTVS~tya~EI~~~--~~l-~~~~~Kl~vI~NGID~~~w----~P~tD~~lp~~y~-----------------~ 815 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN--SAI-APHLYKFHGILNGIDPDIW----DPYNDNFIPVPYT-----------------S 815 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc--cCc-ccccCCEEEEECCcccccc----CCcccccccccCC-----------------c
Confidence 88999999999999877642 001 1124789999999999999 9999999988887 4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeE
Q 004485 438 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 517 (749)
Q Consensus 438 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q 517 (749)
+| +.++|..||..|. +++|++ +++.+++++|.||+++||.++ |++++.++++ . ++|
T Consensus 816 ~~------~~~gK~~~k~~Lr----~~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~--~----------~~q 871 (1036)
T PLN02316 816 EN------VVEGKRAAKEALQ----QRLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRTLE--R----------NGQ 871 (1036)
T ss_pred hh------hhhhhhhhHHHHH----HHhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHHhh--c----------CcE
Confidence 44 3368999999988 489987 457899999999999999999 9999888754 2 689
Q ss_pred EEEEecC-CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhH
Q 004485 518 IMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKF 596 (749)
Q Consensus 518 ~If~GKa-~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka 596 (749)
||++|.| .+.++. .+.++++.+.. .+++ +|.|...|+..++|++++|||++++||+ +||||+++|.|
T Consensus 872 lVIvG~Gpd~~~e~------~l~~La~~Lg~--~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEA 939 (1036)
T PLN02316 872 VVLLGSAPDPRIQN------DFVNLANQLHS--SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTA 939 (1036)
T ss_pred EEEEeCCCCHHHHH------HHHHHHHHhCc--cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHH
Confidence 9999998 444332 45666664321 1466 8999999999999999999999999999 99999999999
Q ss_pred hhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHH
Q 004485 597 SLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSL 675 (749)
Q Consensus 597 ~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~~l 675 (749)
|.+|++||. ..+|| +.|+|.+.+. ...... .....++|+ |.+.++++|..+|
T Consensus 940 Ma~GtppVv----------s~vGG--------L~DtV~d~d~------~~~~~~---~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 940 MRYGSIPVV----------RKTGG--------LFDTVFDVDH------DKERAQ---AQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHcCCCeEE----------EcCCC--------cHhhcccccc------cccccc---ccccCCceEEeCCCCHHHHHHHH
Confidence 999999994 48889 8899876431 100000 000135785 8899999999999
Q ss_pred hcCCCCCCCccccccCCchHHHHHHHHHHHHhhC-HHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 004485 676 EGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKD-QKKWLKMSILSTAGSGKFSSDRTIAQYAKE 739 (749)
Q Consensus 676 ~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d-~~~W~~~~~~~ma~~g~FS~drsi~eY~~~ 739 (749)
. +++..|.+ +..|.++++++|+. +|||++++++|.+-
T Consensus 993 ~-------------------------raL~~~~~~~~~~~~~~r~~m~~--dFSW~~~A~~Y~~L 1030 (1036)
T PLN02316 993 N-------------------------RAISAWYDGRDWFNSLCKRVMEQ--DWSWNRPALDYMEL 1030 (1036)
T ss_pred H-------------------------HHHhhhhhhHHHHHHHHHHHHHh--hCCHHHHHHHHHHH
Confidence 7 88888754 55569999999998 89999999999753
No 18
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.90 E-value=1.9e-24 Score=225.87 Aligned_cols=227 Identities=16% Similarity=0.210 Sum_probs=146.4
Q ss_pred hhccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceee-ecccccccCCCcccccCCeeEEEEECC
Q 004485 40 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEE-VAEDWLEKFSPWEVVRHDVVFPVRFFG 118 (749)
Q Consensus 40 e~d~~lg~GGLG~LAgd~l~s~a~l~~p~~g~Gl~Y~~GyF~Q~i~dG~Q~e-~~d~W~~~~~pwe~~~~~~~~~v~~~g 118 (749)
|..+=.-.||||..++..-++++.+|..+.-+--+|.. + +.+. .|.+ ..+ +.+.+.|
T Consensus 8 E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~-~-~~~~---~~~~~~~~-----------------~~~~~~~ 65 (245)
T PF08323_consen 8 EYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGF-I-DEEY---FQLEPVRR-----------------LSVPFGG 65 (245)
T ss_dssp -BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THH-H-HHHC---TTEEEEEE-----------------ES-STTC
T ss_pred ccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchh-h-hhhh---hcceEEEE-----------------ecccccc
Confidence 33333778999999999999999999999999988832 2 2222 1111 000 0000000
Q ss_pred eEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhhHHhhhhhhccccccccCC
Q 004485 119 SVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG 198 (749)
Q Consensus 119 ~~~~~~~g~~~w~~~~~v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~a~~~~~~~~~It~~LY~~ 198 (749)
. ++.+. . ..+++|+... +++++|+++++.|++ +..+|++
T Consensus 66 ----------------~---v~~~~-~--------~~~~v~~~~~--~~v~v~~i~~~~~f~-----------r~~iY~~ 104 (245)
T PF08323_consen 66 ----------------P---VPVGV-W--------YEVRVYRYPV--DGVPVYFIDNPEYFD-----------RPGIYGD 104 (245)
T ss_dssp ----------------E---EEEE-------------EEEEEEEE--TTEEEEEEESHHHHG-----------SSSSSBS
T ss_pred ----------------c---ccccc-c--------eEEEEEEEEc--CCccEEEecChhhcc-----------ccceecc
Confidence 0 11111 0 3467888764 478999999999997 8889975
Q ss_pred ------CCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccccccccC-CCCcEEEeCCCChhchHHHHHHHHHHhcCCCh
Q 004485 199 ------DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGW 271 (749)
Q Consensus 199 ------D~~~~gk~lRl~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l-~~~~viHlND~H~al~ipellR~l~d~~~l~~ 271 (749)
|+.+ |+.||+.|+++.+ +.+ ++||||||||||+|++ |.++|.... .
T Consensus 105 ~~~~~~d~~~--------rf~~fs~a~le~~-------------~~l~~~pDIIH~hDW~tal~-p~~lk~~~~-----~ 157 (245)
T PF08323_consen 105 NGGDYPDNAE--------RFAFFSRAALELL-------------KKLGWKPDIIHCHDWHTALA-PLYLKERYQ-----Q 157 (245)
T ss_dssp TSSBHTTHHH--------HHHHHHHHHHHHH-------------CTCT-S-SEEEEECGGGTTH-HHHHHHCCS-----S
T ss_pred CCCcchhHHH--------HHHHHHHHHHHHH-------------HhhCCCCCEEEecCchHHHH-HHHhccccc-----c
Confidence 4444 8899999999753 233 6899999999999998 788887532 2
Q ss_pred HHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccc
Q 004485 272 DEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVR 351 (749)
Q Consensus 272 ~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vn 351 (749)
+..+ .+.++|||+||+.+||. |+.+.+. .++++++.+......+. ++.+|
T Consensus 158 ~~~~--~~~~~v~TIHN~~yqg~--~~~~~~~-----------------------~~gl~~~~~~~~~~~~~---~~~in 207 (245)
T PF08323_consen 158 DPFF--ANIPTVFTIHNLEYQGI--FPPEDLK-----------------------ALGLPDEYFQNLDEYEF---YGQIN 207 (245)
T ss_dssp --------SEEEEEESSTT---E--EEGGGGG-----------------------CTT-GGGGS-STTTTEE---TTEEE
T ss_pred cccc--ccceeEEEEcccccCCc--CCHHHHH-----------------------HcCCCHHHhcccccccc---ccccC
Confidence 2233 45779999999999998 8866543 23444443322333332 35899
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhc-Chhhhc
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSLW 386 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~-~~~~l~ 386 (749)
|++.||.+|++|||||++|+++++++.++ |++++.
T Consensus 208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~~~g~GL~~~l 243 (245)
T PF08323_consen 208 FLKAGIVYADKVTTVSPTYAREIQTPEFGEGLEGLL 243 (245)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHTTSHHHHTT-HHHH
T ss_pred HHHHHHHhcCEeeeCCHHHHHHHhCcccCCChHHHh
Confidence 99999999999999999999999988887 776653
No 19
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.77 E-value=1.1e-17 Score=197.70 Aligned_cols=341 Identities=13% Similarity=0.078 Sum_probs=209.7
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 319 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~ 319 (749)
..||+||.|.|.++++. .+++.. ...+.|+|.|++... +....
T Consensus 384 ~~pDlIHahy~d~glva-~lla~~--------------lgVP~v~t~HsL~~~---K~~~~------------------- 426 (784)
T TIGR02470 384 GKPDLIIGNYSDGNLVA-SLLARK--------------LGVTQCTIAHALEKT---KYPDS------------------- 426 (784)
T ss_pred CCCCEEEECCCchHHHH-HHHHHh--------------cCCCEEEECCcchhh---ccccc-------------------
Confidence 47999999999999985 454432 335689999999332 22110
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHH--Hhhhhc-Chhhhc-CCCcccccc
Q 004485 320 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDIL--KADLFA-DYVSLW-PNKLQNKTN 395 (749)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~--~~~~f~-~~~~l~-p~k~~~ItN 395 (749)
+..+..+...-.+ .-++.--.+++..|+.|-++|. .|+. +...-. +.+..+ +..+.+|.|
T Consensus 427 ---------g~~~~~~e~~~~~-----~~r~~ae~~~~~~AD~IItsT~--qEi~~~~~~v~qY~s~~~ft~p~Ly~vvn 490 (784)
T TIGR02470 427 ---------DIYWQEFEDKYHF-----SCQFTADLIAMNAADFIITSTY--QEIAGTKDSVGQYESHQAFTMPGLYRVVH 490 (784)
T ss_pred ---------ccccccchhHHHh-----hhhhhHHHHHHhcCCEEEECcH--HHhhhhhhhhhhhhhcccccccceeeeec
Confidence 0000000000000 0022223478888999999995 3322 111100 122222 235777888
Q ss_pred CCCc-----ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 004485 396 GITP-----RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID 470 (749)
Q Consensus 396 GI~~-----~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d 470 (749)
||+. ..| +|..|.-+-..++. ....+..+.+ .+ +...-++..+. +.+|+..+
T Consensus 491 Gid~~~~Ki~VV----pPGVD~~iF~P~~~-----~~~r~~~~~~---------~i-e~ll~~~~~~~----~~~G~l~d 547 (784)
T TIGR02470 491 GIDVFDPKFNIV----SPGADESIYFPYSD-----KEKRLTNLHP---------EI-EELLFSLEDND----EHYGYLKD 547 (784)
T ss_pred CccCCcCCeEEE----CCCcChhhcCCCCc-----hhhhhhhhhc---------ch-hhhccchhhHH----HHhCCCCC
Confidence 8876 344 57766544332321 0000000000 00 00111333343 46788778
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC----cCCHHHHHHHHHHHHHHhhhc
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF----ATYTNAKRIVKLVNDVGEVVN 546 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~----P~y~~aK~iIk~I~~~a~~in 546 (749)
++.+++.++.|+...|+.+. ++..+.++.++. ..+++|+.|.+. ..+...++.++.+.++++..+
T Consensus 548 ~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~----------~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~g 616 (784)
T TIGR02470 548 PNKPIIFSMARLDRVKNLTG-LVECYGRSPKLR----------ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQ 616 (784)
T ss_pred CCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhC----------CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999 888877654432 146777776542 124444556777777777643
Q ss_pred CCcCCCCcceEEEEcC-----CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCc
Q 004485 547 TDPEVNSYLKVVFVPN-----YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 621 (749)
Q Consensus 547 ~d~~~~~~lkvvF~~n-----Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~ 621 (749)
+.+ +|.|+-- ..-++.+.+-.++|++.+||+ +||||+..+-||..|+++|+|-.|...|+++. |+
T Consensus 617 ----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~d--g~ 686 (784)
T TIGR02470 617 ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEIIQD--GV 686 (784)
T ss_pred ----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcC--CC
Confidence 667 7887542 122344445557899999999 99999999999999999998866666555543 33
Q ss_pred cEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHH
Q 004485 622 NFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 701 (749)
Q Consensus 622 n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~ 701 (749)
|||+| .+.|.+++.++|.
T Consensus 687 tGfLV-------------------------------------dp~D~eaLA~aL~------------------------- 704 (784)
T TIGR02470 687 SGFHI-------------------------------------DPYHGEEAAEKIV------------------------- 704 (784)
T ss_pred cEEEe-------------------------------------CCCCHHHHHHHHH-------------------------
Confidence 44443 4456677777776
Q ss_pred HHH-HHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 004485 702 RVD-QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKE 739 (749)
Q Consensus 702 ~~~-~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~ 739 (749)
++. ....|++.|.+|..+++... ..|||++++++|.+-
T Consensus 705 ~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 705 DFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 554 35679999999999998753 489999999999764
No 20
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.75 E-value=1.3e-16 Score=182.23 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=140.8
Q ss_pred ccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChh
Q 004485 349 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 428 (749)
Q Consensus 349 ~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~ 428 (749)
+..|=..+...||.++|||+.-+++++. +.+.-|++ =|-|||++..|- +
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~~-----Ll~~~pd~--ViPNGid~~~f~-----~------------------- 264 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAEH-----LLKRKPDV--VLPNGLNVKKFS-----A------------------- 264 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHHH-----HhCCCCCE--EeCCCcchhhcc-----c-------------------
Confidence 3446668999999999999998888873 33444566 456999999882 1
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCCeeEeE-cccccc-cccccchhhhHHHHHHHHhh
Q 004485 429 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKE 504 (749)
Q Consensus 429 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-g-~~~d~~~~~~~~-v~R~~e-yKR~~Lnil~~i~~l~~i~~ 504 (749)
..+ +...|..+|.++.++++.++ | ..++|+.+++.+ +.|+.- .||.|+ ++..+.|+.+.+.
T Consensus 265 --------~~e------~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~ 329 (590)
T cd03793 265 --------LHE------FQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLK 329 (590)
T ss_pred --------chh------hhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHH
Confidence 111 33677889999998864432 2 245677777777 799987 999999 9999999997544
Q ss_pred cCccccCCCCCe-EEEEEecCC-------cCCHHHHHHHHHHHHHHhhhcCC----------------------------
Q 004485 505 MSPQERKKTTPR-TIMIGGKAF-------ATYTNAKRIVKLVNDVGEVVNTD---------------------------- 548 (749)
Q Consensus 505 ~~~~~~~~~~p~-q~If~GKa~-------P~y~~aK~iIk~I~~~a~~in~d---------------------------- 548 (749)
.... +.+=+ .+||-++.. .+...-|++-..+.++.++|.+.
T Consensus 330 ~~~~---~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~ 406 (590)
T cd03793 330 VEGS---DTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRR 406 (590)
T ss_pred hcCC---CCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHH
Confidence 1111 11112 234445422 11222233333333332222222
Q ss_pred ---------c-----------------------CC---CCcceEEEEcCC--------CHHHHHhhccCcccccccCCCC
Q 004485 549 ---------P-----------------------EV---NSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAG 585 (749)
Q Consensus 549 ---------~-----------------------~~---~~~lkvvF~~nY--------n~~lA~~i~~gaDv~l~~S~~~ 585 (749)
| .+ .++.||+|.|.| +++. ..+++|||+++.||+
T Consensus 407 ~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~-- 483 (590)
T cd03793 407 IFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSY-- 483 (590)
T ss_pred HHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEeccc--
Confidence 1 11 457899999987 6644 456899999999999
Q ss_pred ccCCCcchhhHhhcCceeeeecCc
Q 004485 586 MEASGTSNMKFSLNGCLIIGTLDG 609 (749)
Q Consensus 586 ~EasGTs~Mka~~NG~l~istlDG 609 (749)
+|+.|..-+-||.-|++.|+|--+
T Consensus 484 yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 484 YEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred cCCCCcHHHHHHHcCCCEEEccCc
Confidence 999999999999999999988653
No 21
>PLN00142 sucrose synthase
Probab=99.71 E-value=9.2e-16 Score=181.83 Aligned_cols=194 Identities=13% Similarity=0.080 Sum_probs=142.8
Q ss_pred HhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC-CcC---CHHHHHHHHHHH
Q 004485 464 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FAT---YTNAKRIVKLVN 539 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa-~P~---y~~aK~iIk~I~ 539 (749)
++|+..+++.+++.++.|+..+|+.+. ++..+.++.++. ..++++++|.+ +|. +...++.++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~----------~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR----------ELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC----------CCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 567666788899999999999999999 988887765431 14788888866 442 333334455666
Q ss_pred HHHhhhcCCcCCCCcceEEEEcC---C--CHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHH
Q 004485 540 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 614 (749)
Q Consensus 540 ~~a~~in~d~~~~~~lkvvF~~n---Y--n~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~ 614 (749)
++++..+ +.+ +|.|+.. + +.++.+.+..++|++++||+ +|++|++-+-||..|++.|+|-.|...|+
T Consensus 633 ~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 6666533 667 7888642 2 24667666667899999999 99999999999999999999866666665
Q ss_pred HHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCch
Q 004485 615 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 694 (749)
Q Consensus 615 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~ 694 (749)
++. |+|||++ .+.|.+++.++|.
T Consensus 705 V~d--G~tG~LV-------------------------------------~P~D~eaLA~aI~------------------ 727 (815)
T PLN00142 705 IVD--GVSGFHI-------------------------------------DPYHGDEAANKIA------------------ 727 (815)
T ss_pred hcC--CCcEEEe-------------------------------------CCCCHHHHHHHHH------------------
Confidence 544 3444444 3445667777775
Q ss_pred HHHHHHHHHH-HHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 004485 695 SYLEAQDRVD-QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 740 (749)
Q Consensus 695 ~y~~~~~~~~-~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~i 740 (749)
++. ..+.|++.|.+|..++.... ..|||++++++|.+-+
T Consensus 728 -------~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 728 -------DFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 443 46789999999999987764 4899999999998744
No 22
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.61 E-value=5.3e-14 Score=158.38 Aligned_cols=255 Identities=18% Similarity=0.185 Sum_probs=159.1
Q ss_pred chhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhH
Q 004485 351 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 430 (749)
Q Consensus 351 nm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 430 (749)
.+.+.++..++.|-+||+...+.. +..+..+-|.|+.-|.||||...+ .|.-
T Consensus 176 ~~~~~~~~~ad~ii~~s~~~~~~~----~~~~~~~~~~ki~vIpnGvd~~~f----~~~~-------------------- 227 (439)
T TIGR02472 176 EAEEETLAHASLVITSTHQEIEEQ----YALYDSYQPERMQVIPPGVDLSRF----YPPQ-------------------- 227 (439)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHH----HHhccCCCccceEEECCCcChhhc----CCCC--------------------
Confidence 345567788999988886322111 111112346789999999999888 3321
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCcccc
Q 004485 431 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 510 (749)
Q Consensus 431 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~ 510 (749)
++ ..+...+..+. +.+. +++.++++++.|+.+.|++++ ++.++.++.+++.
T Consensus 228 -------~~--------~~~~~~~~~~~-----~~~~--~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~------ 278 (439)
T TIGR02472 228 -------SS--------EETSEIDNLLA-----PFLK--DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE------ 278 (439)
T ss_pred -------cc--------ccchhHHHHHH-----hhcc--ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh------
Confidence 00 00011122222 3332 456789999999999999999 9998876543322
Q ss_pred CCCCCeEEEEEecCCcCCH---HHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCc----ccccccCC
Q 004485 511 KKTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHIST 583 (749)
Q Consensus 511 ~~~~p~q~If~GKa~P~y~---~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~ga----Dv~l~~S~ 583 (749)
.+.-++++|.+..... ..++..+.+.++++.+. +.+ +|.|+....-+-...++++| |+++.||+
T Consensus 279 ---~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~----l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~ 349 (439)
T TIGR02472 279 ---MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYD----LYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL 349 (439)
T ss_pred ---hccEEEEeCCccccccccHHHHHHHHHHHHHHHHcC----CCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc
Confidence 1222345676643221 12233444455555432 677 78887654444444555554 99999999
Q ss_pred CCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCC
Q 004485 584 AGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAF 663 (749)
Q Consensus 584 ~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F 663 (749)
.|+.|+.-+-||..|.+.|+|--|...|+++. ++|||++
T Consensus 350 --~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~~G~lv------------------------------------- 388 (439)
T TIGR02472 350 --TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CRNGLLV------------------------------------- 388 (439)
T ss_pred --cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CCcEEEe-------------------------------------
Confidence 99999999999999999999977777666643 3455544
Q ss_pred CCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 004485 664 GSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 740 (749)
Q Consensus 664 ~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~i 740 (749)
.+.|.++|.++|. .+..|++.|.+|..++-+.. ..|||++++++|.+-+
T Consensus 389 ~~~d~~~la~~i~----------------------------~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 389 DVLDLEAIASALE----------------------------DALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCCHHHHHHHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 2334555655553 23457777777777664432 3899999999998753
No 23
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.60 E-value=2.3e-14 Score=173.17 Aligned_cols=334 Identities=13% Similarity=0.114 Sum_probs=202.3
Q ss_pred CcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHH
Q 004485 242 KVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFI 321 (749)
Q Consensus 242 ~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~ 321 (749)
||+||.|+|+++.+. .+++.. ....+|||.|++. -+++ ++++.
T Consensus 311 pDvIHaHyw~sG~aa-~~L~~~--------------lgVP~V~T~HSLg---r~K~-----~~ll~-------------- 353 (1050)
T TIGR02468 311 PYVIHGHYADAGDSA-ALLSGA--------------LNVPMVLTGHSLG---RDKL-----EQLLK-------------- 353 (1050)
T ss_pred CCEEEECcchHHHHH-HHHHHh--------------hCCCEEEECccch---hhhh-----hhhcc--------------
Confidence 899999999999985 455543 2256999999974 3222 11110
Q ss_pred HHHHHhcC-CCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhh----------------
Q 004485 322 AMVRSTRS-DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVS---------------- 384 (749)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~---------------- 384 (749)
-+ .+++.+...--+ ...+..-.+++..|+.|-++|+--.+++. ..|+++..
T Consensus 354 ------~g~~~~~~~~~~y~~-----~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~-~lY~~~~~~~~~~~~~~~~~gv~~ 421 (1050)
T TIGR02468 354 ------QGRMSKEEINSTYKI-----MRRIEAEELSLDASEIVITSTRQEIEEQW-GLYDGFDVILERKLRARARRGVSC 421 (1050)
T ss_pred ------cccccccccccccch-----HHHHHHHHHHHHhcCEEEEeCHHHHHHHH-HHhccCCchhhhhhhhhhcccccc
Confidence 01 011111000000 01344456789999999999987665543 34543331
Q ss_pred --hcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 004485 385 --LWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIW 462 (749)
Q Consensus 385 --l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~ 462 (749)
.+..|+.=|-||||+.++ .|.-...-....+ + +.... ..++.. + .. +.
T Consensus 422 ~g~~~~ri~VIPpGVD~~~F----~P~~~~~~~~~~~---~-------~~~~~-~~~~~~---~----~~----l~---- 471 (1050)
T TIGR02468 422 YGRFMPRMAVIPPGMEFSHI----VPHDGDMDGETEG---N-------EEHPA-KPDPPI---W----SE----IM---- 471 (1050)
T ss_pred cccCCCCeEEeCCCCcHHHc----cCCCccccchhcc---c-------ccccc-cccchh---h----HH----HH----
Confidence 123378889999999999 4521110000000 0 00000 011111 1 11 11
Q ss_pred HHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHH---HHHHHHHHH
Q 004485 463 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLVN 539 (749)
Q Consensus 463 ~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~---aK~iIk~I~ 539 (749)
+++ .+|+.+++.+|.|+...|+.+. ++.++.++.++.. ...+++ ++|.+...... .....+.+.
T Consensus 472 -r~~--~~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~--------~~nL~L-IiG~gdd~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 472 -RFF--TNPRKPMILALARPDPKKNITT-LVKAFGECRPLRE--------LANLTL-IMGNRDDIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred -hhc--ccCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc--------CCCEEE-EEecCchhhhhhccchHHHHHHH
Confidence 333 2578899999999999999999 9999888765321 113554 45654322221 122233445
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCC-CHHHHHhhccCc----ccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHH
Q 004485 540 DVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 614 (749)
Q Consensus 540 ~~a~~in~d~~~~~~lkvvF~~nY-n~~lA~~i~~ga----Dv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~ 614 (749)
.+++.+. +.+ +|.|+--- ..+++ .+|..| |++.+||+ +|+-|+.-+-||..|.+.|+|-.|...|+
T Consensus 539 ~li~~lg----L~g--~V~FlG~v~~edvp-~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EI 609 (1050)
T TIGR02468 539 KLIDKYD----LYG--QVAYPKHHKQSDVP-DIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDI 609 (1050)
T ss_pred HHHHHhC----CCC--eEEecCCCCHHHHH-HHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHH
Confidence 5555432 666 77776432 33444 445444 79999999 99999999999999999999988888777
Q ss_pred HHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCch
Q 004485 615 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 694 (749)
Q Consensus 615 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~ 694 (749)
++. ++||+++- +.|.++|.++|.
T Consensus 610 I~~--g~nGlLVd-------------------------------------P~D~eaLA~AL~------------------ 632 (1050)
T TIGR02468 610 HRV--LDNGLLVD-------------------------------------PHDQQAIADALL------------------ 632 (1050)
T ss_pred hcc--CCcEEEEC-------------------------------------CCCHHHHHHHHH------------------
Confidence 754 45666652 223455555543
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 004485 695 SYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 743 (749)
Q Consensus 695 ~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~~ 743 (749)
.+..|++.|.+|..++....-.|||++++++|.+.+=.+
T Consensus 633 ----------~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 633 ----------KLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ----------HHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 345689999999888766555799999999999877544
No 24
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.59 E-value=7.8e-14 Score=151.98 Aligned_cols=244 Identities=18% Similarity=0.180 Sum_probs=163.8
Q ss_pred hchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhh
Q 004485 353 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 432 (749)
Q Consensus 353 ~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 432 (749)
...++..++.|.+||+...+.++. .|+ ++-+.++.-|.||++...| .|.
T Consensus 138 ~~~~~~~ad~vi~~S~~~~~~~~~-~~~---~~~~~~i~vi~ng~~~~~~----~~~----------------------- 186 (388)
T TIGR02149 138 EKTAIEAADRVIAVSGGMREDILK-YYP---DLDPEKVHVIYNGIDTKEY----KPD----------------------- 186 (388)
T ss_pred HHHHHhhCCEEEEccHHHHHHHHH-HcC---CCCcceEEEecCCCChhhc----CCC-----------------------
Confidence 455677899999999987765553 222 2235678888999998877 221
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCC
Q 004485 433 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKK 512 (749)
Q Consensus 433 l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~ 512 (749)
+. ..+. +++|+ +++.+.++++.|+..+|+.++ ++..+.++..
T Consensus 187 -----~~---------------~~~~----~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~~----------- 228 (388)
T TIGR02149 187 -----DG---------------NVVL----DRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIPK----------- 228 (388)
T ss_pred -----ch---------------HHHH----HHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHhh-----------
Confidence 00 0011 25554 467789999999999999999 8888776521
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 513 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 513 ~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
+.++++.|.+.........+.+.+..+.. -.+ +|+|+.+ ++.+-...++++||+++.||+ .|+.|+
T Consensus 229 --~~~l~i~g~g~~~~~~~~~~~~~~~~~~~-------~~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~ 295 (388)
T TIGR02149 229 --DVQVVLCAGAPDTPEVAEEVRQAVALLDR-------NRT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGI 295 (388)
T ss_pred --cCcEEEEeCCCCcHHHHHHHHHHHHHhcc-------ccC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCCh
Confidence 45777776554333322222223322221 112 5788765 567777888999999999999 999999
Q ss_pred chhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHH
Q 004485 592 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPL 671 (749)
Q Consensus 592 s~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l 671 (749)
+.+-||..|.+.|+|-.|...|+++. +.||+++-....+.. ...++|
T Consensus 296 ~~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~~~~~~~~-------------------------------~~~~~l 342 (388)
T TIGR02149 296 VNLEAMACGTPVVASATGGIPEVVVD--GETGFLVPPDNSDAD-------------------------------GFQAEL 342 (388)
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcCCCCCccc-------------------------------chHHHH
Confidence 99999999999999988888887764 456777643211100 002444
Q ss_pred HHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 004485 672 LDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKE 739 (749)
Q Consensus 672 ~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~ 739 (749)
.++| .....|++.+.+|..++.... -.|||+.++++|.+-
T Consensus 343 ~~~i----------------------------~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 383 (388)
T TIGR02149 343 AKAI----------------------------NILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEM 383 (388)
T ss_pred HHHH----------------------------HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4433 334568888888888776543 279999999998753
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.51 E-value=1.8e-12 Score=142.90 Aligned_cols=242 Identities=15% Similarity=0.170 Sum_probs=161.1
Q ss_pred hhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhh
Q 004485 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 434 (749)
Q Consensus 355 lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~ 434 (749)
..+..++.|.++|+...+.+... + +..+.++.-|.|||+...| .|.
T Consensus 159 ~~~~~~d~vi~~s~~~~~~~~~~-~----~~~~~ki~vi~ngvd~~~~----~~~------------------------- 204 (405)
T TIGR03449 159 QLVDNADRLIANTDEEARDLVRH-Y----DADPDRIDVVAPGADLERF----RPG------------------------- 204 (405)
T ss_pred HHHHhcCeEEECCHHHHHHHHHH-c----CCChhhEEEECCCcCHHHc----CCC-------------------------
Confidence 34667899999999777655421 2 2335678889999998777 221
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCC
Q 004485 435 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 514 (749)
Q Consensus 435 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~ 514 (749)
+. - .. ++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .|+ .
T Consensus 205 ---~~------~-~~------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~--~-~~~-----~ 251 (405)
T TIGR03449 205 ---DR------A-TE------------RARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLD--R-DPD-----R 251 (405)
T ss_pred ---cH------H-HH------------HHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHh--h-CCC-----c
Confidence 00 0 00 124454 356788999999999999999 9998888754 2 221 1
Q ss_pred CeEEEEEecCCc-CCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 004485 515 PRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 593 (749)
Q Consensus 515 p~q~If~GKa~P-~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~ 593 (749)
.++++++|.+.+ ++..-. .+.++++.. .+.+ +|.|+..-.-+-...++++||++++||+ .|..|++-
T Consensus 252 ~~~l~ivG~~~~~g~~~~~----~l~~~~~~~----~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~ 319 (405)
T TIGR03449 252 NLRVIVVGGPSGSGLATPD----ALIELAAEL----GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVA 319 (405)
T ss_pred ceEEEEEeCCCCCcchHHH----HHHHHHHHc----CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHH
Confidence 489999996543 212212 233334332 2445 6877765444555678999999999999 89999999
Q ss_pred hhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHH
Q 004485 594 MKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLD 673 (749)
Q Consensus 594 Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~ 673 (749)
+-||..|.+.|+|-.|...|++++ +.++|++ .+.|.+++.+
T Consensus 320 lEAma~G~Pvi~~~~~~~~e~i~~--~~~g~~~-------------------------------------~~~d~~~la~ 360 (405)
T TIGR03449 320 MEAQACGTPVVAARVGGLPVAVAD--GETGLLV-------------------------------------DGHDPADWAD 360 (405)
T ss_pred HHHHHcCCCEEEecCCCcHhhhcc--CCceEEC-------------------------------------CCCCHHHHHH
Confidence 999999999999977776665543 2344433 2234566666
Q ss_pred HHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhc
Q 004485 674 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWN 742 (749)
Q Consensus 674 ~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~ 742 (749)
+|. ++ ..|++.+.+|..++....-.|||++++++|.+-..+
T Consensus 361 ~i~-------------------------~~---l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 361 ALA-------------------------RL---LDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRD 401 (405)
T ss_pred HHH-------------------------HH---HhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 654 33 346777777766655433479999999999865543
No 26
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.41 E-value=7.1e-12 Score=138.76 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=90.6
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++.+.++++.|+..+|+.++ ++..+..+.+ . + .+.+++++|.+. .... +.++.+.. .
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~-~~~~-------l~~~~~~~----~ 247 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDL-LVGIIPEICK--K-H-------PNVRFIIGGDGP-KRIL-------LEEMREKY----N 247 (398)
T ss_pred CCceEEEEEeccchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCCc-hHHH-------HHHHHHHh----C
Confidence 46788999999999999999 9998877654 2 1 268999999874 2221 23333321 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHH
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 616 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~ 616 (749)
+.+ +|.|+...+.+-...++++||++++||+ .|++|++-+-||..|.+.|+|.-|...|+++
T Consensus 248 l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~ 309 (398)
T cd03796 248 LQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLP 309 (398)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhhee
Confidence 556 7888866666677778899999999999 8999999999999999999886666655543
No 27
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.38 E-value=2.1e-11 Score=139.00 Aligned_cols=235 Identities=16% Similarity=0.153 Sum_probs=163.0
Q ss_pred chhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhH
Q 004485 351 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 430 (749)
Q Consensus 351 nm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 430 (749)
.+.+.++..|+.|.+||+...+.... + +.-++|+.-|.|||+...+. |.
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~--~----g~~~~ki~vIpNgid~~~f~----~~--------------------- 284 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIE--D----GADPEKIRVIPNGIDPERFA----PA--------------------- 284 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHH--c----CCCHHHeEEeCCCcCHHHcC----Cc---------------------
Confidence 45667888999999999976655432 1 23356788899999977661 10
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCcccc
Q 004485 431 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 510 (749)
Q Consensus 431 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~ 510 (749)
.. . ...++.+.++++.|+...|+.+. +++.+..+.+- .
T Consensus 285 -------~~--------~-------------------~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~---- 322 (475)
T cd03813 285 -------RR--------A-------------------RPEKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRKK---I---- 322 (475)
T ss_pred -------cc--------c-------------------ccCCCCcEEEEEeccccccCHHH-HHHHHHHHHHh---C----
Confidence 00 0 01245689999999999999999 99988777541 1
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCC
Q 004485 511 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 590 (749)
Q Consensus 511 ~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasG 590 (749)
.+++++++|.+.......+ .+.++++..+ +.+ +|.|+. ..++. .+++.+|+++.||+ .|++|
T Consensus 323 ---p~~~l~IvG~g~~~~~~~~----e~~~li~~l~----l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p 384 (475)
T cd03813 323 ---PDAEGWVIGPTDEDPEYAE----ECRELVESLG----LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQP 384 (475)
T ss_pred ---CCeEEEEECCCCcChHHHH----HHHHHHHHhC----CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCC
Confidence 2589999998853322222 3444444322 455 788876 34444 56789999999999 89999
Q ss_pred cchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChH
Q 004485 591 TSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYN 669 (749)
Q Consensus 591 Ts~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~ 669 (749)
+.-+-||..|.+.|+|--|...|+++..+.+ .|| .+|. +.+.|.+
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~---~~g-------------------------------~~G~lv~~~d~~ 430 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDE---ALG-------------------------------PAGEVVPPADPE 430 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCccc---ccC-------------------------------CceEEECCCCHH
Confidence 9999999999999999777777666553211 111 1232 3344567
Q ss_pred HHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 004485 670 PLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 738 (749)
Q Consensus 670 ~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~ 738 (749)
++.++|. .+..|++.|.+|..++.+.. -.|||++++++|.+
T Consensus 431 ~la~ai~----------------------------~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 431 ALARAIL----------------------------RLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHHHH----------------------------HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 7766554 34568888999888776543 38999999999976
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.32 E-value=1.2e-10 Score=126.54 Aligned_cols=239 Identities=14% Similarity=0.132 Sum_probs=161.4
Q ss_pred chhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 004485 354 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 433 (749)
Q Consensus 354 ~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 433 (749)
...+..++.|-++|+...+.+... + ...+.++.-|.||++...|. |..
T Consensus 158 ~~~~~~ad~ii~~s~~~~~~~~~~-~----~~~~~~~~vi~ng~~~~~~~----~~~----------------------- 205 (398)
T cd03800 158 ERLLRAADRVIASTPQEAEELYSL-Y----GAYPRRIRVVPPGVDLERFT----PYG----------------------- 205 (398)
T ss_pred HHHHhhCCEEEEcCHHHHHHHHHH-c----cccccccEEECCCCCcccee----ccc-----------------------
Confidence 345677999999999776665532 1 12234577888999988772 210
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCC
Q 004485 434 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 513 (749)
Q Consensus 434 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~ 513 (749)
++ . .. +++.+. .++.+.++++.|+..+|+.++ ++..+.++.+. .
T Consensus 206 ----~~------~-~~------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~------- 249 (398)
T cd03800 206 ----RA------E-AR------------RARLLR--DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R------- 249 (398)
T ss_pred ----ch------h-hH------------HHhhcc--CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C-------
Confidence 01 0 00 012232 356688999999999999998 99888887642 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 004485 514 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 593 (749)
Q Consensus 514 ~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~ 593 (749)
.++++++.|.+...+.... ...+..+++..+ ..+ +|.|+.-.+.+-...+++.||++++||. .|++|++-
T Consensus 250 ~~~~l~i~G~~~~~~~~~~--~~~~~~~~~~~~----~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l 319 (398)
T cd03800 250 ERANLVIVGGPRDDILAMD--EEELRELARELG----VID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTA 319 (398)
T ss_pred CCeEEEEEECCCCcchhhh--hHHHHHHHHhcC----CCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHH
Confidence 2688999987765543221 112333444321 334 7888877777777778888999999999 89999999
Q ss_pred hhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHH
Q 004485 594 MKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLD 673 (749)
Q Consensus 594 Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~ 673 (749)
+-||..|.+.|++-.|...|++++. ++|+++ .+.+.+++.+
T Consensus 320 ~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~-------------------------------------~~~~~~~l~~ 360 (398)
T cd03800 320 LEAMACGLPVVATAVGGPRDIVVDG--VTGLLV-------------------------------------DPRDPEALAA 360 (398)
T ss_pred HHHHhcCCCEEECCCCCHHHHccCC--CCeEEe-------------------------------------CCCCHHHHHH
Confidence 9999999999988777766655432 234333 2223455555
Q ss_pred HHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 004485 674 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 737 (749)
Q Consensus 674 ~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~ 737 (749)
.+. .+..|++.+.+|..++.... ..|||+..+++|.
T Consensus 361 ~i~----------------------------~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 361 ALR----------------------------RLLTDPALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 543 34567888888888776654 4899999999986
No 29
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.30 E-value=1.3e-10 Score=126.93 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=99.6
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhh-hcCCc
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEV-VNTDP 549 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~-in~d~ 549 (749)
++.++++++.|+.+.|++++ ++.++.++.+- .+ ...++++++.|.+.+...........+.++++. .
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~---~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~---- 276 (392)
T cd03805 209 SGKKTFLSINRFERKKNIAL-AIEAFAILKDK---LA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELL---- 276 (392)
T ss_pred CCceEEEEEeeecccCChHH-HHHHHHHHHhh---cc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhc----
Confidence 56789999999999999999 99998887642 10 002689999999877654433333455555543 2
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHH
Q 004485 550 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 616 (749)
Q Consensus 550 ~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~ 616 (749)
...+ +|.|+.....+....++.+||+++.||. .|..|++-+-||..|++.|+|.-|...|++.
T Consensus 277 ~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~ 339 (392)
T cd03805 277 LLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVV 339 (392)
T ss_pred CCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhc
Confidence 2455 8999988877777889999999999999 8999999999999999999986666555443
No 30
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.28 E-value=2e-10 Score=130.31 Aligned_cols=231 Identities=13% Similarity=0.094 Sum_probs=148.0
Q ss_pred hhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 004485 356 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 435 (749)
Q Consensus 356 ai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 435 (749)
....++.|-++|+...+.+++. ...-+.++.-|.||||...+ +|..
T Consensus 202 ~~~~ad~ii~~S~~~~~~l~~~-----~~~~~~kv~vi~nGvd~~~f----~p~~------------------------- 247 (465)
T PLN02871 202 LHRAADLTLVTSPALGKELEAA-----GVTAANRIRVWNKGVDSESF----HPRF------------------------- 247 (465)
T ss_pred HHhhCCEEEECCHHHHHHHHHc-----CCCCcCeEEEeCCccCcccc----CCcc-------------------------
Confidence 3456888999998877766532 11114577778899998877 3421
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCC
Q 004485 436 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 515 (749)
Q Consensus 436 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p 515 (749)
+.. +. +. ++.. ..++.++++++.|+..+|+.+. ++..+.++ .+
T Consensus 248 --~~~-------~~----~~--------~~~~-~~~~~~~i~~vGrl~~~K~~~~-li~a~~~~--------------~~ 290 (465)
T PLN02871 248 --RSE-------EM----RA--------RLSG-GEPEKPLIVYVGRLGAEKNLDF-LKRVMERL--------------PG 290 (465)
T ss_pred --ccH-------HH----HH--------HhcC-CCCCCeEEEEeCCCchhhhHHH-HHHHHHhC--------------CC
Confidence 110 00 11 1111 2356788999999999999988 65543321 15
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhh
Q 004485 516 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 595 (749)
Q Consensus 516 ~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mk 595 (749)
++++|+|.+. ..+ .+.++++. . +|.|+.--.-+-...++++||+++.||. .|..|+.-+-
T Consensus 291 ~~l~ivG~G~-~~~-------~l~~~~~~--------~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlE 350 (465)
T PLN02871 291 ARLAFVGDGP-YRE-------ELEKMFAG--------T--PTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLE 350 (465)
T ss_pred cEEEEEeCCh-HHH-------HHHHHhcc--------C--CeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHH
Confidence 7899999752 111 23333321 1 5666533232445568899999999998 8999999999
Q ss_pred HhhcCceeeeecCchhHHHHHHh-cCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHH
Q 004485 596 FSLNGCLIIGTLDGANVEIRQEI-GEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDS 674 (749)
Q Consensus 596 a~~NG~l~istlDG~~vE~~~~~-Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~ 674 (749)
||..|.+.|+|-.|...|+++.. .++||++| .+.|.+++.++
T Consensus 351 AmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv-------------------------------------~~~d~~~la~~ 393 (465)
T PLN02871 351 AMASGVPVVAARAGGIPDIIPPDQEGKTGFLY-------------------------------------TPGDVDDCVEK 393 (465)
T ss_pred HHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe-------------------------------------CCCCHHHHHHH
Confidence 99999999988777666666431 12344444 23345555554
Q ss_pred HhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhc
Q 004485 675 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWN 742 (749)
Q Consensus 675 l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~iw~ 742 (749)
|. ....|++.+.+|..++-.....|||+++++++.+.+|.
T Consensus 394 i~----------------------------~ll~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~ 433 (465)
T PLN02871 394 LE----------------------------TLLADPELRERMGAAAREEVEKWDWRAATRKLRNEQYS 433 (465)
T ss_pred HH----------------------------HHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 43 33457777777766664444479999999998877663
No 31
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.28 E-value=2.9e-10 Score=122.61 Aligned_cols=232 Identities=17% Similarity=0.223 Sum_probs=152.5
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+...++..++.|.++|+-..+.+++. + ..+.++.-|.||++..... |.
T Consensus 135 ~~~~~~~~~d~ii~~s~~~~~~~~~~-~-----~~~~~i~vi~n~~~~~~~~----~~---------------------- 182 (371)
T cd04962 135 ATRFSIEKSDGVTAVSESLRQETYEL-F-----DITKEIEVIPNFVDEDRFR----PK---------------------- 182 (371)
T ss_pred HHHHHHhhCCEEEEcCHHHHHHHHHh-c-----CCcCCEEEecCCcCHhhcC----CC----------------------
Confidence 34456677899999999777666532 2 1245677788998865431 10
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
.+. .. +++.+. .++..+++++.|+..+|+.+. ++..+.++.+ .
T Consensus 183 ------~~~-------~~------------~~~~~~--~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~--~------- 225 (371)
T cd04962 183 ------PDE-------AL------------KRRLGA--PEGEKVLIHISNFRPVKRIDD-VIRIFAKVRK--E------- 225 (371)
T ss_pred ------chH-------HH------------HHhcCC--CCCCeEEEEecccccccCHHH-HHHHHHHHHh--c-------
Confidence 000 00 123444 356788999999999999999 8888776643 1
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
.|.++++.|.+.. .. .+.+.++.. .+.+ +|.|+. +..++ ..++++||++++||+ .|+.|+
T Consensus 226 --~~~~l~i~G~g~~-~~-------~~~~~~~~~----~~~~--~v~~~g-~~~~~-~~~~~~~d~~v~ps~--~E~~~~ 285 (371)
T cd04962 226 --VPARLLLVGDGPE-RS-------PAERLAREL----GLQD--DVLFLG-KQDHV-EELLSIADLFLLPSE--KESFGL 285 (371)
T ss_pred --CCceEEEEcCCcC-HH-------HHHHHHHHc----CCCc--eEEEec-CcccH-HHHHHhcCEEEeCCC--cCCCcc
Confidence 2689999998742 22 223333322 1445 677766 44444 466889999999999 999999
Q ss_pred chhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHH
Q 004485 592 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPL 671 (749)
Q Consensus 592 s~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l 671 (749)
+-+-||..|.+.|+|-.|...|++++ +.|||++ .+.|.+++
T Consensus 286 ~~~EAma~g~PvI~s~~~~~~e~i~~--~~~G~~~-------------------------------------~~~~~~~l 326 (371)
T cd04962 286 AALEAMACGVPVVASNAGGIPEVVKH--GETGFLV-------------------------------------DVGDVEAM 326 (371)
T ss_pred HHHHHHHcCCCEEEeCCCCchhhhcC--CCceEEc-------------------------------------CCCCHHHH
Confidence 99999999999998865555444433 2333333 23345555
Q ss_pred HHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHH
Q 004485 672 LDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAG-SGKFSSDRTIAQYAKE 739 (749)
Q Consensus 672 ~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~-~g~FS~drsi~eY~~~ 739 (749)
.+.+. ....|++.+.+|..++-.. .-.|||+..+++|.+-
T Consensus 327 ~~~i~----------------------------~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 367 (371)
T cd04962 327 AEYAL----------------------------SLLEDDELWQEFSRAARNRAAERFDSERIVPQYEAL 367 (371)
T ss_pred HHHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 55443 3446788887777666544 2379999999999864
No 32
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.26 E-value=2.5e-10 Score=127.84 Aligned_cols=177 Identities=16% Similarity=0.106 Sum_probs=124.6
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
.+.++++.|+.++|+.+. ++..+.++.+ . + .++++++.|.|... . .+.+.++.. .+.
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~l~~--~-~-------~~~~l~ivG~G~~~----~----~l~~~~~~~----~l~ 278 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQLKE--Q-G-------VAFRYRILGIGPWE----R----RLRTLIEQY----QLE 278 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEECchhH----H----HHHHHHHHc----CCC
Confidence 356889999999999999 9998877654 1 1 26899999987421 1 233333322 145
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCC----ccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecC
Q 004485 553 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 628 (749)
Q Consensus 553 ~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~----~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~ 628 (749)
+ +|.|..-.+-+-...+++.||+++.||+.+ +|..|+.-|-||..|.+.|+|-.|...|+++. ++|||++-
T Consensus 279 ~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv~- 353 (406)
T PRK15427 279 D--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLVP- 353 (406)
T ss_pred C--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEeC-
Confidence 5 677765445445567889999999999853 58899999999999999999977777666644 34555442
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhh
Q 004485 629 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 708 (749)
Q Consensus 629 ~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~ 708 (749)
+.|.++|.++|. ....
T Consensus 354 ------------------------------------~~d~~~la~ai~----------------------------~l~~ 369 (406)
T PRK15427 354 ------------------------------------ENDAQALAQRLA----------------------------AFSQ 369 (406)
T ss_pred ------------------------------------CCCHHHHHHHHH----------------------------HHHh
Confidence 234555555543 3345
Q ss_pred -CHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 004485 709 -DQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 741 (749)
Q Consensus 709 -d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~iw 741 (749)
|++.+.+|..++-+.. ..|||++.++++++-+-
T Consensus 370 ~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 370 LDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8888888887765442 38999999999987653
No 33
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.24 E-value=9.7e-10 Score=126.37 Aligned_cols=127 Identities=15% Similarity=0.121 Sum_probs=95.8
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++.++++++.||+..|++.. ++..+.++.+ . . .++++++.|.+... + .+.+.++..+
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk--~-~-------pdirLvIVGdG~~~-e-------eLk~la~elg---- 452 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFA-WIDFAARYLQ--H-H-------PATRFVLVGDGDLR-A-------EAQKRAEQLG---- 452 (578)
T ss_pred CCCcEEEEEEEEehhcCHHH-HHHHHHHHHh--H-C-------CCeEEEEEeCchhH-H-------HHHHHHHHcC----
Confidence 45678999999999999998 8887776654 2 1 25899999987421 1 2334443321
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecC
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 628 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~ 628 (749)
+.+ +|.|+. |..++. .+++++|+++.||+ +|+.|.+-+-||..|.+.|+|-.|...|++++ |+|||++..
T Consensus 453 L~d--~V~FlG-~~~Dv~-~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp~ 522 (578)
T PRK15490 453 ILE--RILFVG-ASRDVG-YWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILDD 522 (578)
T ss_pred CCC--cEEECC-ChhhHH-HHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEECC
Confidence 445 677764 444454 57899999999999 99999999999999999999998988888765 578888743
No 34
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.24 E-value=5.5e-10 Score=117.63 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=93.3
Q ss_pred CCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 004485 470 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 549 (749)
Q Consensus 470 d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~ 549 (749)
.++.+.++++.|+.+.|+.++ ++.++.++.+- ..++++++.|++.+.+... +..+++..
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~----------~~~~~l~i~G~~~~~~~~~------~~~~~~~~---- 258 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDL-LIEAFAKLAER----------FPDWHLVIAGPDEGGYRAE------LKQIAAAL---- 258 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhh----------cCCeEEEEECCCCcchHHH------HHHHHHhc----
Confidence 356788999999999999999 99888877641 1268999999988877653 22222221
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHH
Q 004485 550 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 616 (749)
Q Consensus 550 ~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~ 616 (749)
...+ +|.|....+-+--..++..||++++||+ .|.+|++-+-||..|.+.|+|-.|...|++.
T Consensus 259 ~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~ 321 (375)
T cd03821 259 GLED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIE 321 (375)
T ss_pred Cccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhh
Confidence 2445 7888776665555667788999999999 7999999999999999999887666655543
No 35
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.23 E-value=2.2e-10 Score=121.52 Aligned_cols=233 Identities=16% Similarity=0.105 Sum_probs=156.7
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+....+..++.+-++|+-..+.+.+. + ...+.++.-|.||++...+. +.
T Consensus 133 ~~~~~~~~~d~~i~~s~~~~~~~~~~-~----~~~~~~~~vi~~~~~~~~~~----~~---------------------- 181 (365)
T cd03809 133 LLRRALRRADAIITVSEATKRDLLRY-L----GVPPDKIVVIPLGVDPRFRP----PP---------------------- 181 (365)
T ss_pred HHHHHHHHcCEEEEccHHHHHHHHHH-h----CcCHHHEEeeccccCccccC----CC----------------------
Confidence 33455678899999998777666532 2 22345677788999987662 10
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
.+ + . + .... ..++.+.++++.|+..+|+.++ ++..+..+.+ . +
T Consensus 182 ------~~--------~--~--~--------~~~~--~~~~~~~i~~~G~~~~~K~~~~-~l~~~~~~~~--~-~----- 224 (365)
T cd03809 182 ------AE--------A--E--V--------LRAL--YLLPRPYFLYVGTIEPRKNLER-LLEAFARLPA--K-G----- 224 (365)
T ss_pred ------ch--------H--H--H--------HHHh--cCCCCCeEEEeCCCccccCHHH-HHHHHHHHHH--h-c-----
Confidence 01 0 0 0 1111 1245678899999999999999 8888877754 1 1
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
.++++++.|.+.+.+......+ +. ...++ +|.|+...+.+-...+++.||+.++||+ .|..|+
T Consensus 225 --~~~~l~i~G~~~~~~~~~~~~~-------~~----~~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~ 287 (365)
T cd03809 225 --PDPKLVIVGKRGWLNEELLARL-------RE----LGLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGL 287 (365)
T ss_pred --CCCCEEEecCCccccHHHHHHH-------HH----cCCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCC
Confidence 1589999999888777643222 11 12445 7888877777777888999999999999 899999
Q ss_pred chhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHH
Q 004485 592 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPL 671 (749)
Q Consensus 592 s~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l 671 (749)
+-+-||..|.+.|++--|+..|++. ++++ .+.+.+.+++
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~----~~~~-------------------------------------~~~~~~~~~~ 326 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG----DAAL-------------------------------------YFDPLDPEAL 326 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec----Ccee-------------------------------------eeCCCCHHHH
Confidence 9999999999999774444332221 1111 1233345666
Q ss_pred HHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 004485 672 LDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 738 (749)
Q Consensus 672 ~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~ 738 (749)
.+.|. + +..|++...++..++.+....|||++.+++|.+
T Consensus 327 ~~~i~-------------------------~---l~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 327 AAAIE-------------------------R---LLEDPALREELRERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHH-------------------------H---HhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 66554 2 356788777777776444448999999999863
No 36
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.18 E-value=1.3e-09 Score=116.36 Aligned_cols=188 Identities=18% Similarity=0.225 Sum_probs=125.4
Q ss_pred ccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCC
Q 004485 359 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 438 (749)
Q Consensus 359 ~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~ 438 (749)
.++.+-++|+...+.+++ .+ ++-+.++.-|-|||+...+ .|.. ..
T Consensus 124 ~~~~vi~~s~~~~~~~~~-~~----~~~~~k~~~i~ngi~~~~~----~~~~--------------------------~~ 168 (355)
T cd03819 124 RGDRVIAVSNFIADHIRE-NY----GVDPDRIRVIPRGVDLDRF----DPGA--------------------------VP 168 (355)
T ss_pred hcCEEEEeCHHHHHHHHH-hc----CCChhhEEEecCCcccccc----Cccc--------------------------cc
Confidence 467788899877777662 22 2334677888999998876 2210 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEE
Q 004485 439 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 518 (749)
Q Consensus 439 d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~ 518 (749)
+.+ + .. ++++.+. .++.+.++++.|+..+|+++. ++..+..+.+. ..++++
T Consensus 169 ~~~----~--------~~----~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~----------~~~~~l 219 (355)
T cd03819 169 PER----I--------LA----LAREWPL--PKGKPVILLPGRLTRWKGQEV-FIEALARLKKD----------DPDVHL 219 (355)
T ss_pred hHH----H--------HH----HHHHcCC--CCCceEEEEeeccccccCHHH-HHHHHHHHHhc----------CCCeEE
Confidence 100 1 00 2235453 456788999999999999999 88888776541 126899
Q ss_pred EEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccC-CCCccCCCcchhhHh
Q 004485 519 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS-TAGMEASGTSNMKFS 597 (749)
Q Consensus 519 If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S-~~~~EasGTs~Mka~ 597 (749)
++.|.+.+.....+.+.+.+.+.. ..+ +|.|+.. ..+++ .++++||++++|| . .|..|++-+-||
T Consensus 220 ~ivG~~~~~~~~~~~~~~~~~~~~--------~~~--~v~~~g~-~~~~~-~~l~~ad~~i~ps~~--~e~~~~~l~EA~ 285 (355)
T cd03819 220 LIVGDAQGRRFYYAELLELIKRLG--------LQD--RVTFVGH-CSDMP-AAYALADIVVSASTE--PEAFGRTAVEAQ 285 (355)
T ss_pred EEEECCcccchHHHHHHHHHHHcC--------Ccc--eEEEcCC-cccHH-HHHHhCCEEEecCCC--CCCCchHHHHHH
Confidence 999998776544333333332222 334 5666654 44454 5678899999999 6 899999999999
Q ss_pred hcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 598 LNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 598 ~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
..|.+.|++-.|...|++... .+|+++
T Consensus 286 a~G~PvI~~~~~~~~e~i~~~--~~g~~~ 312 (355)
T cd03819 286 AMGRPVIASDHGGARETVRPG--ETGLLV 312 (355)
T ss_pred hcCCCEEEcCCCCcHHHHhCC--CceEEe
Confidence 999999999777776666442 244444
No 37
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.17 E-value=5.3e-10 Score=127.31 Aligned_cols=254 Identities=13% Similarity=0.102 Sum_probs=151.0
Q ss_pred CCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHH
Q 004485 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 320 (749)
Q Consensus 241 ~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~ 320 (749)
..|+||+||-|..++ |.++|... .+.+.+|+.|+|-|.. +.+ +.+|...+|+..+
T Consensus 131 ~~d~iwihDyhl~ll-p~~lr~~~-------------~~~~i~~f~HipfP~~------e~~-~~lp~~~~ll~~~---- 185 (460)
T cd03788 131 PGDLVWVHDYHLLLL-PQMLRERG-------------PDARIGFFLHIPFPSS------EIF-RCLPWREELLRGL---- 185 (460)
T ss_pred CCCEEEEeChhhhHH-HHHHHhhC-------------CCCeEEEEEeCCCCCh------HHH-hhCCChHHHHHHH----
Confidence 568999999999987 88888642 3467999999996443 123 3467655554433
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcc
Q 004485 321 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 400 (749)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~ 400 (749)
++-| ++.+ .....+.--+..|+.+-+++......++ +.+ ...++.-|-||||+.
T Consensus 186 -------l~~D--------~igF----~t~~~~~~Fl~~~~~~l~~~~~~~~~i~---~~g----~~~~i~vip~GID~~ 239 (460)
T cd03788 186 -------LGAD--------LIGF----QTERYARNFLSCCSRLLGLEVTDDGGVE---YGG----RRVRVGAFPIGIDPD 239 (460)
T ss_pred -------hcCC--------EEEE----CCHHHHHHHHHHHHHHcCCcccCCceEE---ECC----EEEEEEEEeCeEcHH
Confidence 1211 1111 1122233333445555555544311111 111 133567778999987
Q ss_pred cccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcc
Q 004485 401 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480 (749)
Q Consensus 401 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~ 480 (749)
.+ .|.. .+++ .+...+ ++. +. .++.++++++.
T Consensus 240 ~f----~~~~---------------------------~~~~-------~~~~~~-~~~-------~~--~~~~~~il~vg 271 (460)
T cd03788 240 AF----RKLA---------------------------ASPE-------VQERAA-ELR-------ER--LGGRKLIVGVD 271 (460)
T ss_pred HH----HHHh---------------------------cCch-------hHHHHH-HHH-------Hh--cCCCEEEEEec
Confidence 66 2211 1111 111100 111 11 24678899999
Q ss_pred cccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 004485 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 559 (749)
Q Consensus 481 R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y-~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF 559 (749)
|+...|+.++ ++..+.++.+ . .|..+ ..+++++.|.+.-++ ....++.+.+.+++..+|..-...+.-.|+|
T Consensus 272 Rl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~ 344 (460)
T cd03788 272 RLDYSKGIPE-RLLAFERLLE--R-YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRY 344 (460)
T ss_pred CccccCCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEE
Confidence 9999999999 9999888764 2 33211 136777776543222 2223456677777776653211111124777
Q ss_pred EcCC-CHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCce
Q 004485 560 VPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 602 (749)
Q Consensus 560 ~~nY-n~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l 602 (749)
+.++ +-+--..++++||+++.||+ .|.-|+.-+-||.-|.+
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDD 386 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecC
Confidence 7654 56666678899999999999 89999999999999986
No 38
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.17 E-value=1.2e-09 Score=120.77 Aligned_cols=240 Identities=15% Similarity=0.176 Sum_probs=158.5
Q ss_pred hchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhh
Q 004485 353 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 432 (749)
Q Consensus 353 ~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 432 (749)
..+++..++.|-++|+...+.+.. .++.++.-|.|||+...+ .|.-
T Consensus 150 ~~~~~~~ad~vi~~s~~~~~~~~~--------~~~~ki~vI~ngvd~~~f----~~~~---------------------- 195 (396)
T cd03818 150 ILLALAQADAGVSPTRWQRSTFPA--------ELRSRISVIHDGIDTDRL----RPDP---------------------- 195 (396)
T ss_pred hHHHHHhCCEEECCCHHHHhhCcH--------hhccceEEeCCCcccccc----CCCc----------------------
Confidence 446778899999999876665432 224678889999998877 2310
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEccc-ccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 433 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 433 l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R-~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
. - ..+ + ..+..+.++.++++++.| +..+|+.++ ++..+.++.+ . .
T Consensus 196 ------~------~-~~~------~------~~~~~~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~--~-~----- 241 (396)
T cd03818 196 ------Q------A-RLR------L------PNGRVLTPGDEVITFVARNLEPYRGFHV-FMRALPRLLR--A-R----- 241 (396)
T ss_pred ------h------h-hhc------c------cccccCCCCCeEEEEECCCcccccCHHH-HHHHHHHHHH--H-C-----
Confidence 0 0 000 0 011124467788999998 999999999 9999888764 2 1
Q ss_pred CCCCeEEEEEecCCcCCHH----HH-HHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTN----AK-RIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM 586 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~----aK-~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~ 586 (749)
.++++++.|.+.|.|.. +. ..-+.+.+++... -.+ +|.|+....-+-...+++.||+++.||+ .
T Consensus 242 --~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~ 310 (396)
T cd03818 242 --PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRL-----DLS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--P 310 (396)
T ss_pred --CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhccc-----Ccc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--c
Confidence 25889999986654421 10 0011233333211 123 7888876665566678899999999999 8
Q ss_pred cCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCC
Q 004485 587 EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY 666 (749)
Q Consensus 587 EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~ 666 (749)
|..|.+-+-||.-|.+.|+|-.|...|+++. ++||+++ .+.
T Consensus 311 e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~~G~lv-------------------------------------~~~ 351 (396)
T cd03818 311 FVLSWSLLEAMACGCLVVGSDTAPVREVITD--GENGLLV-------------------------------------DFF 351 (396)
T ss_pred cccchHHHHHHHCCCCEEEcCCCCchhhccc--CCceEEc-------------------------------------CCC
Confidence 9999999999999999999976666555543 2344433 223
Q ss_pred ChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 004485 667 DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 738 (749)
Q Consensus 667 ~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~ 738 (749)
|.++|.++|. + +..|++.+.+|..++-+.. ..|||++++++|.+
T Consensus 352 d~~~la~~i~-------------------------~---ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 352 DPDALAAAVI-------------------------E---LLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CHHHHHHHHH-------------------------H---HHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 4566655554 2 3457777777777665543 26999999999863
No 39
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.17 E-value=1.5e-09 Score=118.31 Aligned_cols=121 Identities=20% Similarity=0.202 Sum_probs=85.4
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++.++++++.|+.++|++++ ++..+.++.+ . .|. ...++++++.|.+... . .+.+.++.. .
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~~---~~~~~~l~i~G~g~~~----~----~~~~~~~~~----~ 252 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPT-LVRAFALLVR--Q-LPE---GAERLRLVIVGDGPAR----G----ACEQMVRAA----G 252 (374)
T ss_pred CCCeEEEEEecCCcccCHHH-HHHHHHHHHH--h-Ccc---cccceEEEEecCCchH----H----HHHHHHHHc----C
Confidence 46789999999999999999 9998888764 2 111 0125899999976422 1 223333321 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHH
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 616 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~ 616 (749)
+.. .+++.++..++ ..++++||++++||+ .|++|++-+-||..|.+.|+|--|...|+++
T Consensus 253 ~~~---~v~~~g~~~~~-~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~ 312 (374)
T TIGR03088 253 LAH---LVWLPGERDDV-PALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQ 312 (374)
T ss_pred Ccc---eEEEcCCcCCH-HHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhc
Confidence 333 44445554444 567799999999999 9999999999999999999886555555543
No 40
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.15 E-value=2.2e-09 Score=113.90 Aligned_cols=178 Identities=12% Similarity=0.091 Sum_probs=123.3
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHH-HHHHHHHHhhhcCCc
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 549 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~i-Ik~I~~~a~~in~d~ 549 (749)
++.+.++++.|+.++|+.+. ++..+.++.+ . + .++++++.|.+++.....+.. .+++.++
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~~~~i~~~-------- 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLLVA--K-H-------PDVRLLVAGETHPDLERYRGEAYALAERL-------- 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHHHh--h-C-------CCeEEEEeccCccchhhhhhhhHhHHHhc--------
Confidence 45688899999999999999 9988887754 2 1 268999999988766542211 0012221
Q ss_pred CCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCcc--CCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 550 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGME--ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 550 ~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~E--asGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
...+ +|.|+.+ ...+-...+++.||++++||+ .| ..|..-+-||..|.+.|++-.|. .|.+.. +.++++
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~--~~~g~~- 315 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD--GGTGLL- 315 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeee--CCCcEE-
Confidence 2455 7999988 555566778889999999999 88 66677778999999999775544 322211 122222
Q ss_pred cCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHH
Q 004485 627 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 706 (749)
Q Consensus 627 G~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~ 706 (749)
+.+.|.+++.++|. .+
T Consensus 316 ------------------------------------~~~~d~~~~~~~l~----------------------------~l 331 (366)
T cd03822 316 ------------------------------------VPPGDPAALAEAIR----------------------------RL 331 (366)
T ss_pred ------------------------------------EcCCCHHHHHHHHH----------------------------HH
Confidence 22334566655553 33
Q ss_pred hhCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 004485 707 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 739 (749)
Q Consensus 707 Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~ 739 (749)
..|++.+.+|..++......|||++.+++|.+-
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 364 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWERVAERYLRL 364 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 467888888888876665569999999999764
No 41
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.15 E-value=2.9e-09 Score=111.71 Aligned_cols=124 Identities=17% Similarity=0.154 Sum_probs=89.4
Q ss_pred HhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 004485 464 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 543 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~ 543 (749)
++++ +++.++++++.|+..+|+.++ ++..+.++.+ . . .+++++++|++....... .... +
T Consensus 186 ~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~-----~~~~--~ 245 (365)
T cd03807 186 ELGL--PEDTFLIGIVARLHPQKDHAT-LLRAAALLLK--K-F-------PNARLLLVGDGPDRANLE-----LLAL--K 245 (365)
T ss_pred hcCC--CCCCeEEEEecccchhcCHHH-HHHHHHHHHH--h-C-------CCeEEEEecCCcchhHHH-----HHHH--H
Confidence 4454 366789999999999999999 9998877754 1 1 268999999886554431 1111 1
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHH
Q 004485 544 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 617 (749)
Q Consensus 544 ~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~ 617 (749)
.. ..++ +|.|+.. ..++ ..+++.||+.+.||+ .|..|++-+-||..|.+.|++.-|+..|++.+
T Consensus 246 ~~----~~~~--~v~~~g~-~~~~-~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~ 309 (365)
T cd03807 246 EL----GLED--KVILLGE-RSDV-PALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD 309 (365)
T ss_pred hc----CCCc--eEEEccc-cccH-HHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc
Confidence 11 1444 5666543 3344 468899999999999 79999999999999999998876766555543
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.14 E-value=4.6e-09 Score=113.15 Aligned_cols=174 Identities=18% Similarity=0.178 Sum_probs=119.4
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
.+.++++.|+..+|+.+. ++..+..+.+ . + .++.++++|.+. +. ..+.++++.. .++
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~--~~------~~~~~~~~~~----~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFARLAR--R-V-------PEVRLVIIGDGP--LL------AALEALARAL----GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCch--HH------HHHHHHHHHc----CCC
Confidence 356889999999999999 8888877754 1 1 258999999753 11 1234444331 134
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCC----ccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecC
Q 004485 553 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 628 (749)
Q Consensus 553 ~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~----~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~ 628 (749)
+ +|.|+...+-+--..+++.||+++.||+.+ .|++|++-+-||..|.+.|++-.|...|++++ +++|++|
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~--~~~g~~~-- 318 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED--GETGLLV-- 318 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec--CCeeEEE--
Confidence 5 788887776666667889999999999732 48999999999999999998876666554433 2344443
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhh
Q 004485 629 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 708 (749)
Q Consensus 629 ~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~ 708 (749)
.+.|.++|.++|. + ...
T Consensus 319 -----------------------------------~~~d~~~l~~~i~-------------------------~---l~~ 335 (367)
T cd05844 319 -----------------------------------PEGDVAALAAALG-------------------------R---LLA 335 (367)
T ss_pred -----------------------------------CCCCHHHHHHHHH-------------------------H---HHc
Confidence 2234556655554 2 335
Q ss_pred CHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 004485 709 DQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 738 (749)
Q Consensus 709 d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~ 738 (749)
|++.+.++..++.... -.|||++.+++|.+
T Consensus 336 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 336 DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 7777777766654432 27999999998754
No 43
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.12 E-value=2.6e-09 Score=114.01 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=85.6
Q ss_pred HhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 004485 464 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 543 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~ 543 (749)
..++ +++.+++.++.|+..+|+.++ ++..+.++.+ . . .+++|+|.|.+.-. + .+.+..+
T Consensus 181 ~~~~--~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~~~----~----~~~~~~~ 239 (360)
T cd04951 181 ALGV--KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLS--D-Y-------LDIKLLIAGDGPLR----A----TLERLIK 239 (360)
T ss_pred HcCc--CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCCcH----H----HHHHHHH
Confidence 4454 466789999999999999999 8888877654 1 1 25899999975422 1 2223333
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHH
Q 004485 544 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 615 (749)
Q Consensus 544 ~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~ 615 (749)
..+ ..+ +|.|+. +-.++ ..++.+||+++.||+ .|..|..-+-||..|.+.|++--|...|++
T Consensus 240 ~~~----~~~--~v~~~g-~~~~~-~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i 301 (360)
T cd04951 240 ALG----LSN--RVKLLG-LRDDI-AAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVV 301 (360)
T ss_pred hcC----CCC--cEEEec-ccccH-HHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEe
Confidence 221 334 577765 33334 467899999999999 899999999999999999987555554433
No 44
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.10 E-value=2e-09 Score=117.92 Aligned_cols=186 Identities=17% Similarity=0.127 Sum_probs=127.0
Q ss_pred HhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 004485 464 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 543 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~ 543 (749)
++|+ +++.++++++.||+.+|+.++ ++.++.++.+.. .+++++++|.+.+.....+++.+.+.+..
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~----------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~- 248 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFG-VIDAYRKVKERV----------PDPQLVLVGSGATDDPEGWIVYEEVLEYA- 248 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHH-HHHHHHHHHhhC----------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-
Confidence 4564 467899999999999999999 999888775421 25799999998765443333334433322
Q ss_pred hhcCCcCCCCcceEEEEcCC--CHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCc
Q 004485 544 VVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 621 (749)
Q Consensus 544 ~in~d~~~~~~lkvvF~~nY--n~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~ 621 (749)
...+ +|.|+... +-+....++++||++++||+ .|..|++-+-||..|.+.|++--|...|++.. +.
T Consensus 249 ------~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~--~~ 316 (372)
T cd03792 249 ------EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIED--GE 316 (372)
T ss_pred ------CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhccc--CC
Confidence 1344 67777664 56666778999999999999 99999999999999999997754444333321 23
Q ss_pred cEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHH
Q 004485 622 NFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 701 (749)
Q Consensus 622 n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~ 701 (749)
+++++. +.+++..
T Consensus 317 ~g~~~~---------------------------------------~~~~~a~---------------------------- 329 (372)
T cd03792 317 TGFLVD---------------------------------------TVEEAAV---------------------------- 329 (372)
T ss_pred ceEEeC---------------------------------------CcHHHHH----------------------------
Confidence 333321 1122222
Q ss_pred HHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 004485 702 RVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIWN 742 (749)
Q Consensus 702 ~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~iw~ 742 (749)
.+.....|++.+.+|..++-... -.|||++++++|.+-+.+
T Consensus 330 ~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 33334567777877777664432 279999999999887654
No 45
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.09 E-value=7.4e-09 Score=123.05 Aligned_cols=126 Identities=16% Similarity=0.194 Sum_probs=95.5
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
.+.++++++.|+.++|++++ ++..+.++.+ + . .+++++|.|.+. +.. .+.++++..+
T Consensus 515 ~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~-------p~~~LvIvG~G~--~~~------~L~~l~~~lg---- 571 (694)
T PRK15179 515 DARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-H-------PKVRFIMVGGGP--LLE------SVREFAQRLG---- 571 (694)
T ss_pred CCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-C-------cCeEEEEEccCc--chH------HHHHHHHHcC----
Confidence 45788999999999999999 9998888764 2 1 258999999874 221 2344444322
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
+.+ +|.| .+|--.+. .++++||+++.||+ +|..|.+=+-||..|.+.|+|.-|...|++++ ++|||++.
T Consensus 572 L~~--~V~f-lG~~~dv~-~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~ 640 (694)
T PRK15179 572 MGE--RILF-TGLSRRVG-YWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLP 640 (694)
T ss_pred CCC--cEEE-cCCcchHH-HHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeC
Confidence 445 5555 55654554 67899999999999 99999999999999999999988888787765 46777764
No 46
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.08 E-value=4.1e-09 Score=112.28 Aligned_cols=181 Identities=14% Similarity=0.084 Sum_probs=124.1
Q ss_pred hhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 004485 356 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 435 (749)
Q Consensus 356 ai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 435 (749)
.+..|+.|.++|+...+.++.. + -.+.+...|.||++...|. +.
T Consensus 134 ~~~~~d~vi~~s~~~~~~~~~~-~-----~~~~~~~~i~~gi~~~~~~----~~-------------------------- 177 (357)
T cd03795 134 FLRRADAIVATSPNYAETSPVL-R-----RFRDKVRVIPLGLDPARYP----RP-------------------------- 177 (357)
T ss_pred HHHhcCEEEeCcHHHHHHHHHh-c-----CCccceEEecCCCChhhcC----Cc--------------------------
Confidence 5667899999999877765421 1 1235678888999988772 11
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCC
Q 004485 436 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 515 (749)
Q Consensus 436 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p 515 (749)
. . .+. +.... ..+.+.+++++|+.++|+.+. ++.++.++. +
T Consensus 178 ---~------~--~~~-----------~~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~ 218 (357)
T cd03795 178 ---D------A--LEE-----------AIWRR--AAGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------D 218 (357)
T ss_pred ---c------h--hhh-----------HhhcC--CCCCcEEEEecccccccCHHH-HHHHHHhcc--------------C
Confidence 0 0 000 01112 235578999999999999998 777665531 4
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhh
Q 004485 516 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 595 (749)
Q Consensus 516 ~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mk 595 (749)
+.++++|.+..... +.++++. ..... +|.|+...+-+....+++.||+.++||....|+.|++-+-
T Consensus 219 ~~l~i~G~g~~~~~--------~~~~~~~----~~~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E 284 (357)
T cd03795 219 APLVIVGEGPLEAE--------LEALAAA----LGLLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE 284 (357)
T ss_pred cEEEEEeCChhHHH--------HHHHHHh----cCCcc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence 78999998753222 2233322 12344 7999888887777788899999999998768999999999
Q ss_pred HhhcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 596 FSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 596 a~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
||..|.+.|+|-.|...|.+.. .++||+++
T Consensus 285 a~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~ 314 (357)
T cd03795 285 AMAFGKPVISTEIGTGGSYVNL-HGVTGLVV 314 (357)
T ss_pred HHHcCCCEEecCCCCchhHHhh-CCCceEEe
Confidence 9999999999876666554443 23455444
No 47
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.05 E-value=1.5e-08 Score=112.70 Aligned_cols=173 Identities=12% Similarity=0.100 Sum_probs=116.0
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+.+..+..++.|.+||+...+.+++. .+-+.++.-|.|||+...+. |.
T Consensus 164 ~~~~~~~~ad~ii~~S~~~~~~~~~~------~~~~~~i~vi~ngvd~~~~~----~~---------------------- 211 (412)
T PRK10307 164 FERSLLRRFDNVSTISRSMMNKAREK------GVAAEKVIFFPNWSEVARFQ----PV---------------------- 211 (412)
T ss_pred HHHHHHhhCCEEEecCHHHHHHHHHc------CCCcccEEEECCCcCHhhcC----CC----------------------
Confidence 34456668999999999877776532 23356788889999987772 21
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
.+. .. .. +++++|+ +++.++++++.|+.++|+.+. ++..+.++. . .
T Consensus 212 ------~~~-------~~-~~--------~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l~---~-~----- 257 (412)
T PRK10307 212 ------ADA-------DV-DA--------LRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRLR---D-R----- 257 (412)
T ss_pred ------Ccc-------ch-HH--------HHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHhc---c-C-----
Confidence 000 00 00 1134454 356788999999999999998 888876542 2 1
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
.+++++++|.+. ..+ .+.++++..+ . + +|.|+.-...+-...++++||+++.||+ .|+.|.
T Consensus 258 --~~~~l~ivG~g~-~~~-------~l~~~~~~~~----l-~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~ 318 (412)
T PRK10307 258 --PDLIFVICGQGG-GKA-------RLEKMAQCRG----L-P--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADL 318 (412)
T ss_pred --CCeEEEEECCCh-hHH-------HHHHHHHHcC----C-C--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccc
Confidence 258999999764 111 2344444321 2 2 5888765566777788999999999999 687664
Q ss_pred c----hhhHhhcCceeeeecCc
Q 004485 592 S----NMKFSLNGCLIIGTLDG 609 (749)
Q Consensus 592 s----~Mka~~NG~l~istlDG 609 (749)
. -.-||..|.+.|+|..|
T Consensus 319 ~~p~kl~eama~G~PVi~s~~~ 340 (412)
T PRK10307 319 VLPSKLTNMLASGRNVVATAEP 340 (412)
T ss_pred cCcHHHHHHHHcCCCEEEEeCC
Confidence 3 24578999999988543
No 48
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.05 E-value=6e-09 Score=110.96 Aligned_cols=170 Identities=16% Similarity=0.116 Sum_probs=119.8
Q ss_pred hhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 004485 356 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 435 (749)
Q Consensus 356 ai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 435 (749)
.+..++.+.++|+...+.+++. + +..+.++.-|.||++...+. +.
T Consensus 127 ~~~~~~~vi~~s~~~~~~l~~~-~----~~~~~~~~vi~~~~d~~~~~----~~-------------------------- 171 (355)
T cd03799 127 KLARADFVVAISEYNRQQLIRL-L----GCDPDKIHVVHCGVDLERFP----PR-------------------------- 171 (355)
T ss_pred HHhhCCEEEECCHHHHHHHHHh-c----CCCcccEEEEeCCcCHHHcC----Cc--------------------------
Confidence 3456888889999887777642 1 23345677788988866551 10
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCC
Q 004485 436 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 515 (749)
Q Consensus 436 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p 515 (749)
. ...+++.+.++++.|+..+|+.++ ++..+.++.+ . + .+
T Consensus 172 ------------~------------------~~~~~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~--~-~-------~~ 210 (355)
T cd03799 172 ------------P------------------PPPPGEPLRILSVGRLVEKKGLDY-LLEALALLKD--R-G-------ID 210 (355)
T ss_pred ------------c------------------ccccCCCeEEEEEeeeccccCHHH-HHHHHHHHhh--c-C-------CC
Confidence 0 001234567889999999999999 9998887654 1 1 26
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc------cCC
Q 004485 516 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM------EAS 589 (749)
Q Consensus 516 ~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~------Eas 589 (749)
++++|.|.+.+..+ +.+..+..+ .++ +|.|.....-+-...+++.||+.+.||+ . |+.
T Consensus 211 ~~l~i~G~~~~~~~--------~~~~~~~~~----~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~ 274 (355)
T cd03799 211 FRLDIVGDGPLRDE--------LEALIAELG----LED--RVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGL 274 (355)
T ss_pred eEEEEEECCccHHH--------HHHHHHHcC----CCC--eEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCc
Confidence 89999998876433 223333221 344 6778777766667788899999999999 6 999
Q ss_pred CcchhhHhhcCceeeeecCchhHHHHHH
Q 004485 590 GTSNMKFSLNGCLIIGTLDGANVEIRQE 617 (749)
Q Consensus 590 GTs~Mka~~NG~l~istlDG~~vE~~~~ 617 (749)
|++-+-||..|.+.|++..|+.-|+++.
T Consensus 275 ~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~ 302 (355)
T cd03799 275 PVVLMEAMAMGLPVISTDVSGIPELVED 302 (355)
T ss_pred cHHHHHHHHcCCCEEecCCCCcchhhhC
Confidence 9999999999999998866666555543
No 49
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.03 E-value=1.8e-08 Score=105.25 Aligned_cols=172 Identities=16% Similarity=0.108 Sum_probs=120.3
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++.+.++++.|+..+|+.++ ++..+.++.+ + + .+++|++.|.+.+.+...+. .+.+ . .
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~~~------~~~~-~----~ 243 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDE-LLEAARILKA--K-G-------PNVRLLLVGDGDEENPAAIL------EIEK-L----G 243 (359)
T ss_pred CCCcEEEEEeccccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCCcchhhHHH------HHHh-c----C
Confidence 46689999999999999999 9888877654 1 1 26899999999887775432 1111 1 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCcc
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 630 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~ 630 (749)
... +|.|+.. . +-...+++.||+++.||+ .|.+|++-+-||..|.+.|+|-.|...|++++ +++|+++
T Consensus 244 ~~~--~v~~~g~-~-~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~---- 311 (359)
T cd03808 244 LEG--RVEFLGF-R-DDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLV---- 311 (359)
T ss_pred Ccc--eEEEeec-c-ccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEE----
Confidence 233 5666554 3 335567889999999999 69999999999999999998866655554433 2344433
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCH
Q 004485 631 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 710 (749)
Q Consensus 631 d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~ 710 (749)
.+.+.+++.+++. ....|+
T Consensus 312 ---------------------------------~~~~~~~~~~~i~----------------------------~l~~~~ 330 (359)
T cd03808 312 ---------------------------------PPGDAEALADAIE----------------------------RLIEDP 330 (359)
T ss_pred ---------------------------------CCCCHHHHHHHHH----------------------------HHHhCH
Confidence 2223455555443 234677
Q ss_pred HHHHHHHHHHhcc-CCCCChHHHHHHHH
Q 004485 711 KKWLKMSILSTAG-SGKFSSDRTIAQYA 737 (749)
Q Consensus 711 ~~W~~~~~~~ma~-~g~FS~drsi~eY~ 737 (749)
+.+.++..++... ...|||++.+++|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 331 ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 7788777776554 34899999999885
No 50
>PHA01633 putative glycosyl transferase group 1
Probab=99.00 E-value=4.6e-09 Score=115.07 Aligned_cols=186 Identities=13% Similarity=0.111 Sum_probs=127.0
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
|+.+.++++.|++.+|++++ ++.++.++.+ . .|.. ...++++++|.+ .+.++ .
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~--~-~p~~---~~~i~l~ivG~~------------~~~~l--------~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNT--K-YPDI---AKKIHFFVISHK------------QFTQL--------E 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHH--h-CCCc---cccEEEEEEcHH------------HHHHc--------C
Confidence 46688999999999999999 9999988764 2 2210 013678887731 12221 2
Q ss_pred CCCcceEEEEcCCC---HHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 551 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 551 ~~~~lkvvF~~nYn---~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
+++ +|.|+-.++ -+-...++++||++++||+ .|++|+..+-||..|++.|++.-|...|+ +|+..+++|
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei---~g~~~~~Li- 270 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF---TSWQWNLLI- 270 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee---cCCccceee-
Confidence 556 788876442 3445679999999999999 89999999999999999999887777554 454333554
Q ss_pred CccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHH
Q 004485 628 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 706 (749)
Q Consensus 628 ~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~ 706 (749)
..|+|.++.. + .-+.|. |.++++++|.++|. ++...
T Consensus 271 -~~~~v~~~~~-----~------------~~g~g~~~~~~d~~~la~ai~-------------------------~~~~~ 307 (335)
T PHA01633 271 -KSSKVEEYYD-----K------------EHGQKWKIHKFQIEDMANAII-------------------------LAFEL 307 (335)
T ss_pred -CCCCHHHhcC-----c------------ccCceeeecCCCHHHHHHHHH-------------------------HHHhc
Confidence 4566665421 1 014564 77889999999997 66665
Q ss_pred hhCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 004485 707 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 738 (749)
Q Consensus 707 Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~ 738 (749)
+ ++..= .+..+..+. .|+|++-.++|.+
T Consensus 308 ~-~~~~~-~~~~~~~a~--~f~~~~~~~~~~~ 335 (335)
T PHA01633 308 Q-DREER-SMKLKELAK--KYDIRNLYTRFLE 335 (335)
T ss_pred c-Chhhh-hHHHHHHHH--hcCHHHHHHHhhC
Confidence 5 33221 222233344 8999999888753
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.99 E-value=2.3e-08 Score=106.88 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=146.4
Q ss_pred hccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 004485 358 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 437 (749)
Q Consensus 358 ~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~ 437 (749)
..+..+-++|....+.+++. + .+-+.++.-|.|||+...+ .|.
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~-~----~~~~~~~~vi~ngi~~~~~----~~~---------------------------- 176 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSS-S----LFKGIPIEVIPNGIDTTIF----RPR---------------------------- 176 (365)
T ss_pred cCCcEEEehhHHHHHHHHhc-c----ccCCCceEEeCCCCccccc----CCC----------------------------
Confidence 45667788888766666532 1 1224578888899998877 221
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccc--cccccchhhhHHHHHHHHhhcCccccCCCCC
Q 004485 438 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTP 515 (749)
Q Consensus 438 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~e--yKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p 515 (749)
+ -... ++..+++ ++..++.+..|... +|+.++ ++..+..+.+- . ..+
T Consensus 177 -~------~~~~------------~~~~~~~--~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~-~--------~~~ 225 (365)
T cd03825 177 -D------KREA------------RKRLGLP--ADKKIILFGAVGGTDPRKGFDE-LIEALKRLAER-W--------KDD 225 (365)
T ss_pred -c------HHHH------------HHHhCCC--CCCeEEEEEecCCCccccCHHH-HHHHHHHhhhc-c--------CCC
Confidence 0 0000 1234443 45566667777665 899999 88888766431 0 126
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCC-HHHHHhhccCcccccccCCCCccCCCcchh
Q 004485 516 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNM 594 (749)
Q Consensus 516 ~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn-~~lA~~i~~gaDv~l~~S~~~~EasGTs~M 594 (749)
+++++.|.+.+.... . ... +|.|+.... .+.-..+++.||+.++||+ .|+.|++-+
T Consensus 226 ~~~~i~G~~~~~~~~------------~-------~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFGASDPEIPP------------D-------LPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAI 282 (365)
T ss_pred eEEEEeCCCchhhhc------------c-------CCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHH
Confidence 899999988764331 0 233 577777766 5566778899999999999 999999999
Q ss_pred hHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHH
Q 004485 595 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDS 674 (749)
Q Consensus 595 ka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~ 674 (749)
-||..|.+.|++-.|...|++.. ++++|+ +...+.+++.++
T Consensus 283 Eam~~g~PvI~~~~~~~~e~~~~--~~~g~~-------------------------------------~~~~~~~~~~~~ 323 (365)
T cd03825 283 EALACGTPVVAFDVGGIPDIVDH--GVTGYL-------------------------------------AKPGDPEDLAEG 323 (365)
T ss_pred HHHhcCCCEEEecCCCChhheeC--CCceEE-------------------------------------eCCCCHHHHHHH
Confidence 99999999998866555444322 122322 223345666665
Q ss_pred HhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 004485 675 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 741 (749)
Q Consensus 675 l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~~iw 741 (749)
|. + ...|++.+.++..++-+.. -.|||++.+++|.+-..
T Consensus 324 l~-------------------------~---l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 324 IE-------------------------W---LLADPDEREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HH-------------------------H---HHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 54 2 2346666666666554332 27999999999986543
No 52
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.96 E-value=6.5e-08 Score=101.26 Aligned_cols=175 Identities=20% Similarity=0.174 Sum_probs=122.2
Q ss_pred hhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhh
Q 004485 355 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 434 (749)
Q Consensus 355 lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~ 434 (749)
..+..++.+.++|+...+.+++. + ....++.-+.||++...+. +.
T Consensus 144 ~~~~~~d~ii~~s~~~~~~~~~~-~-----~~~~~~~~i~~~~~~~~~~----~~------------------------- 188 (377)
T cd03798 144 RALRRADAVIAVSEALADELKAL-G-----IDPEKVTVIPNGVDTERFS----PA------------------------- 188 (377)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHh-c-----CCCCceEEcCCCcCcccCC----Cc-------------------------
Confidence 34456788889999888777642 1 2345778888999987772 21
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCC
Q 004485 435 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 514 (749)
Q Consensus 435 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~ 514 (749)
.. .+. .+.+. +.+.+.+++++|+...|+.+. ++..+.++.+. ..
T Consensus 189 ---~~---------~~~-----------~~~~~--~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~~----------~~ 232 (377)
T cd03798 189 ---DR---------AEA-----------RKLGL--PEDKKVILFVGRLVPRKGIDY-LIEALARLLKK----------RP 232 (377)
T ss_pred ---ch---------HHH-----------HhccC--CCCceEEEEeccCccccCHHH-HHHHHHHHHhc----------CC
Confidence 00 000 12222 345688999999999999999 88887776541 12
Q ss_pred CeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchh
Q 004485 515 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594 (749)
Q Consensus 515 p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~M 594 (749)
++++++.|.+.+... +.+..+. ...+. +|.+....+-+-...++..||+.++||+ .|+.|++-+
T Consensus 233 ~~~l~i~g~~~~~~~--------~~~~~~~----~~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~ 296 (377)
T cd03798 233 DVHLVIVGDGPLREA--------LEALAAE----LGLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLL 296 (377)
T ss_pred CeEEEEEcCCcchHH--------HHHHHHh----cCCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHH
Confidence 689999998765432 2222221 12444 6777777776667788889999999999 799999999
Q ss_pred hHhhcCceeeeecCchhHHHHH
Q 004485 595 KFSLNGCLIIGTLDGANVEIRQ 616 (749)
Q Consensus 595 ka~~NG~l~istlDG~~vE~~~ 616 (749)
-||..|.+.|++-.|+..|.++
T Consensus 297 Ea~~~G~pvI~~~~~~~~~~~~ 318 (377)
T cd03798 297 EAMACGLPVVATDVGGIPEIIT 318 (377)
T ss_pred HHHhcCCCEEEecCCChHHHhc
Confidence 9999999999887776655443
No 53
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.95 E-value=3.8e-08 Score=112.26 Aligned_cols=253 Identities=12% Similarity=0.115 Sum_probs=145.3
Q ss_pred CCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHH
Q 004485 241 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 320 (749)
Q Consensus 241 ~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~ 320 (749)
+-|+|.+||-|=.++ |.++|.+. ...++.|.-|+| ||..-+=+.||..-+|+..+-
T Consensus 127 ~~d~vwvhDYhl~l~-p~~lr~~~-------------~~~~igfFlHip-------fP~~e~f~~lp~r~~il~gll--- 182 (456)
T TIGR02400 127 PGDIVWVHDYHLMLL-PAMLRELG-------------VQNKIGFFLHIP-------FPSSEIYRTLPWRRELLEGLL--- 182 (456)
T ss_pred CCCEEEEecchhhHH-HHHHHhhC-------------CCCeEEEEEeCC-------CCChHHHhhCCcHHHHHHHHh---
Confidence 347999999999887 89999752 346789999987 443333346887777666542
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcc
Q 004485 321 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 400 (749)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~ 400 (749)
+-| +|.++-....=|+...|-+ +-|+......+ .+ .-...++.-+-||||+.
T Consensus 183 --------~~d--------ligF~t~~~~~~Fl~~~~~----~l~~~~~~~~~----~~----~g~~~~v~viP~GID~~ 234 (456)
T TIGR02400 183 --------AYD--------LVGFQTYDDARNFLSAVSR----ELGLETLPNGV----ES----GGRTVRVGAFPIGIDVD 234 (456)
T ss_pred --------cCC--------EEEECCHHHHHHHHHHHHH----HhCCcccCCce----EE----CCcEEEEEEecCcCCHH
Confidence 221 1111000002244332221 11211100000 00 01234577788999988
Q ss_pred cccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcc
Q 004485 401 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 480 (749)
Q Consensus 401 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~ 480 (749)
++. |.. .+++. +.. .+.+++++ ++..+++.|.
T Consensus 235 ~f~----~~~---------------------------~~~~~-------~~~-----~~~lr~~~-----~~~~vIl~Vg 266 (456)
T TIGR02400 235 RFA----EQA---------------------------KKPSV-------QKR-----IAELRESL-----KGRKLIIGVD 266 (456)
T ss_pred HHH----HHh---------------------------cChhH-------HHH-----HHHHHHHc-----CCCeEEEEcc
Confidence 872 211 11111 111 11122333 2557888999
Q ss_pred cccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 004485 481 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 559 (749)
Q Consensus 481 R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF 559 (749)
|++..|+.+. ++..++++++ + +|..+ ..+++++.|... .....-.++.+.+.+++..||..-...+...|++
T Consensus 267 RLd~~KGi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~ 339 (456)
T TIGR02400 267 RLDYSKGLPE-RLLAFERFLE--E-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339 (456)
T ss_pred ccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEE
Confidence 9999999999 9999999865 3 34321 136666554322 1112223455667777766663211111112666
Q ss_pred EcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCce
Q 004485 560 VPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 602 (749)
Q Consensus 560 ~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l 602 (749)
+.+ .+-+---.+|++||+++.||+ .|.-|+.-+-||.-|.+
T Consensus 340 l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P 381 (456)
T TIGR02400 340 LNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDP 381 (456)
T ss_pred EcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCC
Confidence 654 445555678899999999999 89999999999988876
No 54
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.95 E-value=1e-07 Score=99.12 Aligned_cols=288 Identities=17% Similarity=0.136 Sum_probs=182.2
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 319 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~ 319 (749)
.+||+||++.+++..... +.. ...+..++++.|...+... .........
T Consensus 84 ~~~Dii~~~~~~~~~~~~-~~~--------------~~~~~~~i~~~h~~~~~~~--~~~~~~~~~-------------- 132 (374)
T cd03801 84 ERFDVVHAHDWLALLAAA-LAA--------------RLLGIPLVLTVHGLEFGRP--GNELGLLLK-------------- 132 (374)
T ss_pred cCCcEEEEechhHHHHHH-HHH--------------HhcCCcEEEEeccchhhcc--ccchhHHHH--------------
Confidence 478999999999988643 111 1144678999999877643 111000000
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCc
Q 004485 320 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 399 (749)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~ 399 (749)
....+....+..++.+.++|+...+.++.. + ..-+.++.-+.||++.
T Consensus 133 ----------------------------~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-~----~~~~~~~~~i~~~~~~ 179 (374)
T cd03801 133 ----------------------------LARALERRALRRADRIIAVSEATREELREL-G----GVPPEKITVIPNGVDT 179 (374)
T ss_pred ----------------------------HHHHHHHHHHHhCCEEEEecHHHHHHHHhc-C----CCCCCcEEEecCcccc
Confidence 011223344556788888998777766532 1 1113567778899988
Q ss_pred ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEc
Q 004485 400 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 479 (749)
Q Consensus 400 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v 479 (749)
..+. +.- . ..+ .. ....++.+.++++
T Consensus 180 ~~~~----~~~--------~----------------------------~~~------------~~--~~~~~~~~~i~~~ 205 (374)
T cd03801 180 ERFR----PAP--------R----------------------------AAR------------RR--LGIPEDEPVILFV 205 (374)
T ss_pred cccC----ccc--------h----------------------------HHH------------hh--cCCcCCCeEEEEe
Confidence 7772 210 0 000 01 1223566889999
Q ss_pred ccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 004485 480 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 559 (749)
Q Consensus 480 ~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF 559 (749)
.|+...|+.+. ++..+..+.+ . . ..+++++.|.+.. .. .+..+.+. ...+. +|.|
T Consensus 206 g~~~~~k~~~~-~i~~~~~~~~--~-~-------~~~~l~i~G~~~~-~~-------~~~~~~~~----~~~~~--~v~~ 260 (374)
T cd03801 206 GRLVPRKGVDL-LLEALAKLRK--E-Y-------PDVRLVIVGDGPL-RE-------ELEALAAE----LGLGD--RVTF 260 (374)
T ss_pred cchhhhcCHHH-HHHHHHHHhh--h-c-------CCeEEEEEeCcHH-HH-------HHHHHHHH----hCCCc--ceEE
Confidence 99999999998 8888777654 1 1 2589999993321 11 22222222 12445 7888
Q ss_pred EcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhh
Q 004485 560 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 639 (749)
Q Consensus 560 ~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~ 639 (749)
....+-+-...++..||++++||+ .|++|++-+-||..|.+.|++-.|+.-|+++. +.+++++
T Consensus 261 ~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~------------- 323 (374)
T cd03801 261 LGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLV------------- 323 (374)
T ss_pred EeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEe-------------
Confidence 887775667777888999999999 69999999999999999998877776555543 2333333
Q ss_pred ccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHH
Q 004485 640 REDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSIL 719 (749)
Q Consensus 640 ~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~ 719 (749)
.+.+.+++.++|. .+..|++.+.++..+
T Consensus 324 ------------------------~~~~~~~l~~~i~----------------------------~~~~~~~~~~~~~~~ 351 (374)
T cd03801 324 ------------------------PPGDPEALAEAIL----------------------------RLLDDPELRRRLGEA 351 (374)
T ss_pred ------------------------CCCCHHHHHHHHH----------------------------HHHcChHHHHHHHHH
Confidence 2223455555543 234577777777766
Q ss_pred Hhcc-CCCCChHHHHHHHHHH
Q 004485 720 STAG-SGKFSSDRTIAQYAKE 739 (749)
Q Consensus 720 ~ma~-~g~FS~drsi~eY~~~ 739 (749)
+.+. ...|||++.+++|.+-
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~ 372 (374)
T cd03801 352 ARERVAERFSWDRVAARTEEV 372 (374)
T ss_pred HHHHHHHhcCHHHHHHHHHHh
Confidence 5411 1289999999998763
No 55
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.94 E-value=2.9e-08 Score=104.79 Aligned_cols=187 Identities=17% Similarity=0.175 Sum_probs=129.3
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+.+-.+..++.+.++|+...+.++.. + .+.++.-+.||++...+. +.
T Consensus 141 ~~~~~~~~~d~i~~~s~~~~~~~~~~--~-----~~~~~~vi~~~~~~~~~~----~~---------------------- 187 (374)
T cd03817 141 LSRRFYNRCDAVIAPSEKIADLLREY--G-----VKRPIEVIPTGIDLDRFE----PV---------------------- 187 (374)
T ss_pred HHHHHhhhCCEEEeccHHHHHHHHhc--C-----CCCceEEcCCccchhccC----cc----------------------
Confidence 44455667889999999766666532 1 133466678888876661 11
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
+.. . . +++.+. +++.+.+++++|+..+|+.+. ++..+.++.+-
T Consensus 188 ------~~~-----~-~-------------~~~~~~--~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~~--------- 230 (374)
T cd03817 188 ------DGD-----D-E-------------RRKLGI--PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLKE--------- 230 (374)
T ss_pred ------chh-----H-H-------------HHhcCC--CCCCeEEEEEeeeecccCHHH-HHHHHHHHHHh---------
Confidence 000 0 0 123333 356688999999999999998 88888776541
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
..++++++.|.+... + .+.+.++..+ ..+ +|.|+...+-+-...+++.||+.++||+ .|..|+
T Consensus 231 -~~~~~l~i~G~~~~~----~----~~~~~~~~~~----~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~ 293 (374)
T cd03817 231 -EPDVKLVIVGDGPER----E----ELEELARELG----LAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGL 293 (374)
T ss_pred -CCCeEEEEEeCCchH----H----HHHHHHHHcC----CCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcCh
Confidence 126899999976432 1 2233333211 344 7888888777778888999999999999 899999
Q ss_pred chhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 592 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 592 s~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
+-+-||..|.+.|++-.|+..|+++. +++|+++.
T Consensus 294 ~~~Ea~~~g~PvI~~~~~~~~~~i~~--~~~g~~~~ 327 (374)
T cd03817 294 VLLEAMAAGLPVVAVDAPGLPDLVAD--GENGFLFP 327 (374)
T ss_pred HHHHHHHcCCcEEEeCCCChhhheec--CceeEEeC
Confidence 99999999999999988888776654 25566554
No 56
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.90 E-value=5e-08 Score=108.15 Aligned_cols=137 Identities=15% Similarity=0.142 Sum_probs=100.6
Q ss_pred HhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCH-HHHHHHHHHHHHH
Q 004485 464 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT-NAKRIVKLVNDVG 542 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~-~aK~iIk~I~~~a 542 (749)
+.|. +++...+.++.|+..+|+.+. ++.++.++.+ . . .++++++.|.+..... ......+.+.+++
T Consensus 186 ~~~~--~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~--~-~-------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~ 252 (380)
T PRK15484 186 QLNI--SPDETVLLYAGRISPDKGILL-LMQAFEKLAT--A-H-------SNLKLVVVGDPTASSKGEKAAYQKKVLEAA 252 (380)
T ss_pred HhCC--CCCCeEEEEeccCccccCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCccccccchhHHHHHHHHHH
Confidence 4454 345678899999999999999 9998888754 2 1 2589999997753221 1123334566666
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc-cCCCcchhhHhhcCceeeeecCchhHHHHHHhcCc
Q 004485 543 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 621 (749)
Q Consensus 543 ~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~-EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~ 621 (749)
+. ... +|.|+....-+-...++++||+++.||+ + |+.|+.-+-||..|.+.|+|--|...|+++. +.
T Consensus 253 ~~------l~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~ 320 (380)
T PRK15484 253 KR------IGD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GI 320 (380)
T ss_pred Hh------cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CC
Confidence 54 334 6888776665666788999999999998 6 9999999999999999999988887777654 35
Q ss_pred cEEe
Q 004485 622 NFFL 625 (749)
Q Consensus 622 n~~~ 625 (749)
|||+
T Consensus 321 ~G~~ 324 (380)
T PRK15484 321 TGYH 324 (380)
T ss_pred ceEE
Confidence 6654
No 57
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.89 E-value=2.9e-08 Score=105.25 Aligned_cols=122 Identities=14% Similarity=0.067 Sum_probs=85.8
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 553 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 553 (749)
..++++.|+...|++++ ++....+ .++.+++.|.+....... ..+.+.. ...+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~-li~~~~~---------------~~~~l~i~G~~~~~~~~~-------~~~~~~~----~~~~ 224 (335)
T cd03802 172 DYLLFLGRISPEKGPHL-AIRAARR---------------AGIPLKLAGPVSDPDYFY-------REIAPEL----LDGP 224 (335)
T ss_pred CEEEEEEeeccccCHHH-HHHHHHh---------------cCCeEEEEeCCCCHHHHH-------HHHHHhc----ccCC
Confidence 35789999999999998 6664221 157899999886543322 1112110 0234
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 554 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 554 ~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
+|.|+..-+-.-...+++++|++++||+ ..|.+|++-+-||..|.+.|++--|...|+++. +.||+++.
T Consensus 225 --~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~--~~~g~l~~ 293 (335)
T cd03802 225 --DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED--GVTGFLVD 293 (335)
T ss_pred --cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeC--CCcEEEeC
Confidence 7888876665555678899999999997 239999999999999999998877777665543 34666553
No 58
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.86 E-value=3.4e-08 Score=105.71 Aligned_cols=176 Identities=15% Similarity=0.096 Sum_probs=121.6
Q ss_pred chhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 004485 354 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 433 (749)
Q Consensus 354 ~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 433 (749)
...+..++.+.+||+-..+.+... ..+.++.-|.|||+...+. +.
T Consensus 132 ~~~~~~~~~~i~~s~~~~~~~~~~-------~~~~~~~vi~ngvd~~~~~----~~------------------------ 176 (358)
T cd03812 132 KLINRLATDYLACSEEAGKWLFGK-------VKNKKFKVIPNGIDLEKFI----FN------------------------ 176 (358)
T ss_pred HHHHhcCCEEEEcCHHHHHHHHhC-------CCcccEEEEeccCcHHHcC----CC------------------------
Confidence 345556788889998766554421 2356788889999987762 11
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCC
Q 004485 434 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 513 (749)
Q Consensus 434 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~ 513 (749)
+. . +. + ++..+ ..++.+.++++.|+..+|+.++ ++..+.++.+. .
T Consensus 177 ----~~------~---~~--~-------~~~~~--~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~~---~------- 221 (358)
T cd03812 177 ----EE------I---RK--K-------RRELG--ILEDKFVIGHVGRFSEQKNHEF-LIEIFAELLKK---N------- 221 (358)
T ss_pred ----ch------h---hh--H-------HHHcC--CCCCCEEEEEEeccccccChHH-HHHHHHHHHHh---C-------
Confidence 00 0 00 0 12333 3467799999999999999999 99988887652 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 004485 514 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 593 (749)
Q Consensus 514 ~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~ 593 (749)
.++++++.|.+.... .+.+.++.. ...+ +|.|+. +..++. .++..||++++||+ .|.+|++-
T Consensus 222 ~~~~l~ivG~g~~~~--------~~~~~~~~~----~~~~--~v~~~g-~~~~~~-~~~~~adi~v~ps~--~E~~~~~~ 283 (358)
T cd03812 222 PNAKLLLVGDGELEE--------EIKKKVKEL----GLED--KVIFLG-VRNDVP-ELLQAMDVFLFPSL--YEGLPLVL 283 (358)
T ss_pred CCeEEEEEeCCchHH--------HHHHHHHhc----CCCC--cEEEec-ccCCHH-HHHHhcCEEEeccc--ccCCCHHH
Confidence 268999999876432 123333321 1444 566654 444444 57889999999999 89999999
Q ss_pred hhHhhcCceeeeecCchhHHHHHH
Q 004485 594 MKFSLNGCLIIGTLDGANVEIRQE 617 (749)
Q Consensus 594 Mka~~NG~l~istlDG~~vE~~~~ 617 (749)
+-||..|++.|+|-.|..-|+++.
T Consensus 284 lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 284 IEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred HHHHHhCCCEEEEcCCchhhhhcc
Confidence 999999999999977777665544
No 59
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.85 E-value=9.6e-08 Score=100.86 Aligned_cols=229 Identities=14% Similarity=0.121 Sum_probs=149.7
Q ss_pred chhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 004485 354 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 433 (749)
Q Consensus 354 ~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 433 (749)
+..+..++.|-++|+...+.++.. .+.+.++.-|.||++...+. +.
T Consensus 160 ~~~~~~~d~vi~~s~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~----~~------------------------ 205 (394)
T cd03794 160 RLIYRRADAIVVISPGMREYLVRR------GVPPEKISVIPNGVDLELFK----PP------------------------ 205 (394)
T ss_pred HHHHhcCCEEEEECHHHHHHHHhc------CCCcCceEEcCCCCCHHHcC----Cc------------------------
Confidence 445667889999999777666511 22345677788998876551 11
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCC
Q 004485 434 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 513 (749)
Q Consensus 434 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~ 513 (749)
.. ..+ . ++.+ ..++.+.++++.|+..+|+.++ ++..+.++.+.
T Consensus 206 ----~~--------~~~------~-----~~~~--~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~----------- 248 (394)
T cd03794 206 ----PA--------DES------L-----RKEL--GLDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR----------- 248 (394)
T ss_pred ----cc--------hhh------h-----hhcc--CCCCcEEEEEecCcccccCHHH-HHHHHHHHhhc-----------
Confidence 00 000 0 1222 2356789999999999999999 88888776441
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCC-Ccc
Q 004485 514 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS-GTS 592 (749)
Q Consensus 514 ~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~Eas-GTs 592 (749)
.++++++.|++...... .+.... ...+ +|.|+...+-+-...++..||+.+.||. .|.. |.+
T Consensus 249 ~~~~l~i~G~~~~~~~~--------~~~~~~----~~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~ 311 (394)
T cd03794 249 PDIRFLIVGDGPEKEEL--------KELAKA----LGLD---NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGV 311 (394)
T ss_pred CCeEEEEeCCcccHHHH--------HHHHHH----cCCC---cEEEeCCCChHHHHHHHHhhCeeEEecc--Cccccccc
Confidence 26899999987653322 221111 1122 5888887776777788899999999999 6665 333
Q ss_pred ----hhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCCh
Q 004485 593 ----NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDY 668 (749)
Q Consensus 593 ----~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~ 668 (749)
-+-||..|.+.|++-.|..-|+.... +++++ +.+.+.
T Consensus 312 ~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~~-------------------------------------~~~~~~ 352 (394)
T cd03794 312 SPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGLV-------------------------------------VPPGDP 352 (394)
T ss_pred CchHHHHHHHCCCcEEEecCCCchhhhccC--CcceE-------------------------------------eCCCCH
Confidence 48899999999988666654443221 22222 223345
Q ss_pred HHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCC-CCChHHHHHHHH
Q 004485 669 NPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSG-KFSSDRTIAQYA 737 (749)
Q Consensus 669 ~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g-~FS~drsi~eY~ 737 (749)
+++.+.|. ++ ..|++.|.++..++....- .|||++.+++|.
T Consensus 353 ~~l~~~i~-------------------------~~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 353 EALAAAIL-------------------------EL---LDDPEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHH-------------------------HH---HhChHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 66666664 33 3688888888777665543 799999999873
No 60
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.83 E-value=1.3e-07 Score=108.77 Aligned_cols=290 Identities=16% Similarity=0.200 Sum_probs=158.5
Q ss_pred hhhhhhhhhHHHHHHHHHHcccccccccCCCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCc
Q 004485 211 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 290 (749)
Q Consensus 211 Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~ 290 (749)
.-..||.++-+- +..|.+.. .. ..+.+.|+|||.+++. +.++|.. .....||||||--+
T Consensus 120 ea~~Fgyava~f-i~~f~~~~----~~--~~~ViaHfHEWmaG~g-ll~lr~~-------------~~~VaTvFTTHAT~ 178 (633)
T PF05693_consen 120 EAVMFGYAVAWF-IEEFYKFY----EE--KPKVIAHFHEWMAGVG-LLYLRKR-------------KPDVATVFTTHATL 178 (633)
T ss_dssp HHHHHHHHHHHH-HHHHHHH-----S---SEEEEEEEESGGGTTH-HHHHHHT-------------T-SCEEEEEESS-H
T ss_pred HHHHHHHHHHHH-HHHHHHhh----cC--CCcEEEEechHhHhHH-HHHHhcc-------------CCCeeEEEEecccc
Confidence 456788777543 45454332 11 4678899999999998 4566653 14577999999544
Q ss_pred h-----hhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCccccc-ccccccCCCCCCccchhchhhhccccch
Q 004485 291 P-----EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP-SMCILDNNPKKPVVRMANLCVVSAHTVN 364 (749)
Q Consensus 291 ~-----qG~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~-~~~iie~~~~~~~vnm~~lai~~S~~VN 364 (749)
. +|. .++... |+ ..+.++.. ..++ . .+..|-+.|-..||..+
T Consensus 179 lGR~l~~~~----~~~Y~~-L~---------------------~~~~d~eA~~~~i-~-----~k~~iEraaA~~AdvFT 226 (633)
T PF05693_consen 179 LGRYLAANN----KDFYNN-LD---------------------KFNGDQEAGERNI-Y-----HKHSIERAAAHYADVFT 226 (633)
T ss_dssp HHHHHTTTS----S-TTTS-GT---------------------TS-HHHHHHHTT--H-----HHHHHHHHHHHHSSEEE
T ss_pred hhhHhhcCC----CcHHHH-hh---------------------ccCccccccCccc-h-----HHHHHHHHHHHhcCeee
Confidence 2 110 000000 00 01111110 1111 1 15688889999999999
Q ss_pred hhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHH
Q 004485 365 GVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQA 444 (749)
Q Consensus 365 gVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~ 444 (749)
|||..=+.+.+. .++. -|+-+. -||++.... |+ ..+
T Consensus 227 TVSeITa~Ea~~-LL~r----~pDvV~--pNGl~v~~~-----~~-----------------------------~~e--- 262 (633)
T PF05693_consen 227 TVSEITAKEAEH-LLKR----KPDVVT--PNGLNVDKF-----PA-----------------------------LHE--- 262 (633)
T ss_dssp ESSHHHHHHHHH-HHSS------SEE------B-GGGT-----SS-----------------------------TTH---
T ss_pred ehhhhHHHHHHH-HhCC----CCCEEc--CCCcccccc-----cc-----------------------------chH---
Confidence 999998888763 2321 132222 499987765 21 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-C-CCCCCC-CeeEeEcccc-cccccccchhhhHHHHHHHHhhcCccccCCCCCeE-EE
Q 004485 445 EWESAKMASKKHLADYIWRVT-G-VTIDPN-SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IM 519 (749)
Q Consensus 445 ~~~~~K~~nK~~L~~~i~~~~-g-~~~d~~-~~~~~~v~R~-~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q-~I 519 (749)
++..|..+|+++.++++..+ | .++|++ .+++.-+.|. =.-||.|+ .+..+.||.+.+..... .+.|. ||
T Consensus 263 -fqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~-fieAL~rLn~~lk~~~~----~~tVVaFi 336 (633)
T PF05693_consen 263 -FQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV-FIEALARLNHRLKQAGS----DKTVVAFI 336 (633)
T ss_dssp -HHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH-HHHHHHHHHHHHHHTT-----S-EEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH-HHHHHHHHHHHHhhcCC----CCeEEEEE
Confidence 44678999999999998875 3 356654 6777777888 47799999 99999999875431111 11222 32
Q ss_pred EEecCCcCC----HHHHHHHHHHH----HHHhhh----------------------------------------------
Q 004485 520 IGGKAFATY----TNAKRIVKLVN----DVGEVV---------------------------------------------- 545 (749)
Q Consensus 520 f~GKa~P~y----~~aK~iIk~I~----~~a~~i---------------------------------------------- 545 (749)
+.=...-.+ -.|..+.|.+. ++.+.|
T Consensus 337 i~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH 416 (633)
T PF05693_consen 337 IVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTH 416 (633)
T ss_dssp E---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSE
T ss_pred EecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeee
Confidence 221111111 11111111111 111110
Q ss_pred -----cCCcC------------CCCcceEEEEcCC--------CHHHHHhhccCcccccccCCCCccCCCcchhhHhhcC
Q 004485 546 -----NTDPE------------VNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 600 (749)
Q Consensus 546 -----n~d~~------------~~~~lkvvF~~nY--------n~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG 600 (749)
.+||- -.++.||+|+|.| |+.- .-++.|||+-.-||. |||-|-.-+-+...|
T Consensus 417 ~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y-~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~g 493 (633)
T PF05693_consen 417 NLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDY-YDFVRGCDLGVFPSY--YEPWGYTPLECTAFG 493 (633)
T ss_dssp EETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-H-HHHHHHSSEEEE--S--SBSS-HHHHHHHHTT
T ss_pred CCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCH-HHHhccCceeeeccc--cccccCChHHHhhcC
Confidence 12221 2356899999976 4433 346789999999999 999999999999999
Q ss_pred ceeeee
Q 004485 601 CLIIGT 606 (749)
Q Consensus 601 ~l~ist 606 (749)
+++|.|
T Consensus 494 VPsITT 499 (633)
T PF05693_consen 494 VPSITT 499 (633)
T ss_dssp --EEEE
T ss_pred Cceeec
Confidence 999977
No 61
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.77 E-value=5.9e-07 Score=100.84 Aligned_cols=135 Identities=14% Similarity=0.083 Sum_probs=92.3
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++..+++.+.|+...|+.+. ++.++.++.+... ... ...++.++++|.|.- . . .+.+.++..+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G~~--~--~----~l~~~~~~~~---- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKGPL--K--E----KYLERIKELK---- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecCcc--H--H----HHHHHHHHcC----
Confidence 34467778899999999999 9999888764210 000 012489999998742 1 1 2333333211
Q ss_pred CCCcceEEEEcCC-CHHHHHhhccCcccccccCCCC-ccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 551 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 551 ~~~~lkvvF~~nY-n~~lA~~i~~gaDv~l~~S~~~-~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
+. .++|+.+| ..+-...++++||+++.++... .|..++.-+-||.-|.+.|+|--|...|++++ ++||++++
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~ 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC
Confidence 33 48888775 5555667999999998543311 35567778999999999999988888888865 47888874
No 62
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.76 E-value=1e-06 Score=93.28 Aligned_cols=169 Identities=16% Similarity=0.143 Sum_probs=120.3
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
++.+.+++++|+...|+.+. ++..+.++.+. .+++++++|.+.-... +. .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~~-----------~~~~l~i~G~~~~~~~--------~~---~------- 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRRR-----------PPVRLVIVGDGPARAR--------LE---A------- 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhhc-----------CCceEEEEeCCchHHH--------Hh---c-------
Confidence 45678899999999999998 88877766431 2689999997532211 11 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCcc
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 630 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~ 630 (749)
... +|.|..-...+-...+++.||+++.||. .|.+|++-+-||..|.+.|++-.|...|+++. +.+|++
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~--~~~g~~----- 313 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTD--GENGLL----- 313 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcC--CcceEE-----
Confidence 233 6778776677777789999999999999 89999999999999999998866655444432 123332
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCH
Q 004485 631 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 710 (749)
Q Consensus 631 d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~ 710 (749)
+.+.+.+++.+.+. ....|+
T Consensus 314 --------------------------------~~~~~~~~l~~~i~----------------------------~l~~~~ 333 (364)
T cd03814 314 --------------------------------VEPGDAEAFAAALA----------------------------ALLADP 333 (364)
T ss_pred --------------------------------cCCCCHHHHHHHHH----------------------------HHHcCH
Confidence 23334455555443 335678
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 004485 711 KKWLKMSILSTAGSGKFSSDRTIAQYAKEI 740 (749)
Q Consensus 711 ~~W~~~~~~~ma~~g~FS~drsi~eY~~~i 740 (749)
+.+.+|..++......|||++.+++|.+-+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 334 ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 888888777766555799999999998643
No 63
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.68 E-value=3.9e-07 Score=94.75 Aligned_cols=127 Identities=16% Similarity=0.099 Sum_probs=92.1
Q ss_pred CCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 004485 470 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 549 (749)
Q Consensus 470 d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~ 549 (749)
+++.+.++++.|+.+.|+.++ ++..+.++.+- ..++++++.|.+...... .+..+..+
T Consensus 186 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~~----------~~~~~l~i~G~~~~~~~~--------~~~~~~~~--- 243 (353)
T cd03811 186 PPDGPVILAVGRLSPQKGFDT-LIRAFALLRKE----------GPDARLVILGDGPLREEL--------EALAKELG--- 243 (353)
T ss_pred CCCceEEEEEecchhhcChHH-HHHHHHHhhhc----------CCCceEEEEcCCccHHHH--------HHHHHhcC---
Confidence 456788999999999999999 88887776541 126899999987644332 22222211
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 550 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 550 ~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
..+ +|.|....+ + ...++..||+++.||+ .|..|++-+-||..|.+.|++-.|...|++++ +.+|+++.
T Consensus 244 -~~~--~v~~~g~~~-~-~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 312 (353)
T cd03811 244 -LAD--RVHFLGFQS-N-PYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILED--GENGLLVP 312 (353)
T ss_pred -CCc--cEEEecccC-C-HHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC--CCceEEEC
Confidence 334 566655433 3 4568999999999999 89999999999999999999988877666654 35566553
No 64
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.61 E-value=5.8e-07 Score=103.71 Aligned_cols=176 Identities=16% Similarity=0.138 Sum_probs=121.7
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 553 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 553 (749)
..++++.|+.+.|+.+. ++.++.++.+ . . .++++++.|.+... ..+.++++.. ...+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l~~--~-~-------p~~~l~i~G~G~~~--------~~l~~~i~~~----~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKAKK--S-V-------PELTFDIYGEGGEK--------QKLQKIINEN----QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHHHh--h-C-------CCeEEEEEECchhH--------HHHHHHHHHc----CCCC
Confidence 46889999999999999 9998888764 2 1 26899999987531 1234444331 1344
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCc-hhHHHHHHhcCccEEeecCcccc
Q 004485 554 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVAEQ 632 (749)
Q Consensus 554 ~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG-~~vE~~~~~Gg~n~~~fG~~~d~ 632 (749)
+|.|+. +. +++ .+++.||++++||+ .|+.|++-|-||..|.+.|+|--| ...|+++. |+||+++-...|
T Consensus 377 --~V~f~G-~~-~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~~~~~- 446 (500)
T TIGR02918 377 --YIHLKG-HR-NLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIPIDEE- 446 (500)
T ss_pred --eEEEcC-CC-CHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEeCCcc-
Confidence 566654 53 555 46899999999999 999999999999999999998744 67787765 578888743211
Q ss_pred chhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHH
Q 004485 633 VPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712 (749)
Q Consensus 633 v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~ 712 (749)
+.+++++.++|. +++..++ +++.
T Consensus 447 --------------------------------~~d~~~~~~~la------------------------~~I~~ll-~~~~ 469 (500)
T TIGR02918 447 --------------------------------EDDEDQIITALA------------------------EKIVEYF-NSND 469 (500)
T ss_pred --------------------------------ccchhHHHHHHH------------------------HHHHHHh-ChHH
Confidence 011233333332 1333334 4556
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHH
Q 004485 713 WLKMSILSTAGSGKFSSDRTIAQYAKE 739 (749)
Q Consensus 713 W~~~~~~~ma~~g~FS~drsi~eY~~~ 739 (749)
+.+|..++...+-.|||++.+++|.+-
T Consensus 470 ~~~~~~~a~~~a~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 470 IDAFHEYSYQIAEGFLTANIIEKWKKL 496 (500)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 788877776655689999999998754
No 65
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.60 E-value=1.4e-06 Score=105.58 Aligned_cols=249 Identities=15% Similarity=0.155 Sum_probs=144.2
Q ss_pred CcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHH
Q 004485 242 KVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFI 321 (749)
Q Consensus 242 ~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~~~ 321 (749)
-|+|=+||-|=-++ |.+||... .+.++.|.-|+| ||..-+=+.||+.-+|+..+-
T Consensus 148 ~d~vWvhDYhL~ll-p~~lR~~~-------------~~~~igfFlHiP-------FPs~e~fr~lp~r~~il~gll---- 202 (797)
T PLN03063 148 GDVVWCHDYHLMFL-PQYLKEYN-------------NKMKVGWFLHTP-------FPSSEIYKTLPSRSELLRAVL---- 202 (797)
T ss_pred CCEEEEecchhhhH-HHHHHHhC-------------CCCcEEEEecCC-------CCCHHHHhhCCCHHHHHHHHh----
Confidence 37889999999887 89999752 346799999999 555444457898777776542
Q ss_pred HHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCccc
Q 004485 322 AMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRR 401 (749)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~ 401 (749)
+-| +|.+ ...+.+.-=+..|+.+-|++.....+ .+. -...++.-|-||||+..
T Consensus 203 -------~aD--------ligF----~t~~y~r~Fl~~~~r~l~~~~~~~~i----~~~----gr~~~I~viP~GID~~~ 255 (797)
T PLN03063 203 -------TAD--------LIGF----HTYDFARHFLSACTRILGVEGTHEGV----VDQ----GKVTRVAVFPIGIDPER 255 (797)
T ss_pred -------cCC--------EEEe----CCHHHHHHHHHHHHHHhCccccCCce----EEC----CeEEEEEEEecccCHHH
Confidence 221 1221 11222222233344444444321111 011 11234667789999876
Q ss_pred ccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEccc
Q 004485 402 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 481 (749)
Q Consensus 402 Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R 481 (749)
+. +. ...++ .++.. .+ +++.++ +..++..|.|
T Consensus 256 f~----~~---------------------------~~~~~-------~~~~~-~~----lr~~~~-----~~~lIl~VgR 287 (797)
T PLN03063 256 FI----NT---------------------------CELPE-------VKQHM-KE----LKRFFA-----GRKVILGVDR 287 (797)
T ss_pred HH----HH---------------------------hcChh-------HHHHH-HH----HHHhcC-----CCeEEEEecc
Confidence 62 11 11111 11110 01 222332 3568889999
Q ss_pred ccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEE-EecC---CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceE
Q 004485 482 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKA---FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 557 (749)
Q Consensus 482 ~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If-~GKa---~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkv 557 (749)
++..|+..+ ++...+++++ . .|..+ ..+.+|. +|.. -|.|. ++-+.+.++..+||..-......-|
T Consensus 288 Ld~~KGi~~-lL~Afe~lL~--~-~P~~~---~kvvLvqia~psr~~~~~y~---~l~~~v~~l~g~In~~~g~~~~~pv 357 (797)
T PLN03063 288 LDMIKGIPQ-KYLAFEKFLE--E-NPEWR---DKVMLVQIAVPTRNDVPEYQ---KLKSQVHELVGRINGRFGSVSSVPI 357 (797)
T ss_pred cccccCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEecCCCCchHHHH---HHHHHHHHHHHHhhcccccCCCcee
Confidence 999999999 9999999875 3 34321 1356553 3322 13333 3445666666556532111111235
Q ss_pred EEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCce
Q 004485 558 VFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 602 (749)
Q Consensus 558 vF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l 602 (749)
.++.+ .+-+--..+|++||+++.||. .|.=|+.-+-||.-|..
T Consensus 358 ~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p 401 (797)
T PLN03063 358 HHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKA 401 (797)
T ss_pred EEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecC
Confidence 56654 344444568899999999999 99999999999888863
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.58 E-value=2.4e-07 Score=100.87 Aligned_cols=167 Identities=20% Similarity=0.163 Sum_probs=115.8
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 553 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 553 (749)
..++++.|+...|+.+. ++.++.++.+ . . .++.++|.|.+...... ....+. ...++
T Consensus 205 ~~i~~vgrl~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~~~~~~--------~~~~~~----~~~~~ 261 (372)
T cd04949 205 HKIITVARLAPEKQLDQ-LIKAFAKVVK--Q-V-------PDATLDIYGYGDEEEKL--------KELIEE----LGLED 261 (372)
T ss_pred CeEEEEEccCcccCHHH-HHHHHHHHHH--h-C-------CCcEEEEEEeCchHHHH--------HHHHHH----cCCcc
Confidence 56789999999999999 9998888765 2 1 25789999988654322 222221 12444
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCc-hhHHHHHHhcCccEEeecCcccc
Q 004485 554 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVAEQ 632 (749)
Q Consensus 554 ~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG-~~vE~~~~~Gg~n~~~fG~~~d~ 632 (749)
+|.|. +|..++ ..+++.||+++.||+ .|+.|++.+-||..|.+.|++--| ...|+++. ++||+++
T Consensus 262 --~v~~~-g~~~~~-~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv------ 327 (372)
T cd04949 262 --YVFLK-GYTRDL-DEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLV------ 327 (372)
T ss_pred --eEEEc-CCCCCH-HHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEe------
Confidence 45554 465554 457888999999999 899999999999999999987433 23333321 2333332
Q ss_pred chhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHH
Q 004485 633 VPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712 (749)
Q Consensus 633 v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~ 712 (749)
.+.+.++|.++|. .+..|++.
T Consensus 328 -------------------------------~~~d~~~la~~i~----------------------------~ll~~~~~ 348 (372)
T cd04949 328 -------------------------------PKGDIEALAEAII----------------------------ELLNDPKL 348 (372)
T ss_pred -------------------------------CCCcHHHHHHHHH----------------------------HHHcCHHH
Confidence 2334566666554 34568889
Q ss_pred HHHHHHHHhccCCCCChHHHHHHH
Q 004485 713 WLKMSILSTAGSGKFSSDRTIAQY 736 (749)
Q Consensus 713 W~~~~~~~ma~~g~FS~drsi~eY 736 (749)
|.++..++.+.+..|||++.+++|
T Consensus 349 ~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 349 LQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999999988777799999998764
No 67
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.57 E-value=2.3e-06 Score=96.20 Aligned_cols=113 Identities=12% Similarity=-0.062 Sum_probs=75.5
Q ss_pred CCCeeEeEccccccc--ccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 471 PNSLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 471 ~~~~~~~~v~R~~ey--KR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
++.+.++++.|+..+ |+.+. ++..+.++ . .++++++.|++.+...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~l----~---------~~~~L~ivG~g~~~~~------------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMAL----G---------DKIELHTFGKFSPFTA------------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHhC----C---------CCeEEEEEcCCCcccc-------------------
Confidence 455677788885444 55555 55554432 1 1578999998755321
Q ss_pred cCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeec
Q 004485 549 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 627 (749)
Q Consensus 549 ~~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG 627 (749)
. +|.++.- .+..--..++++||++++||+ .|+.|+.-+-||..|++.|+|-=|...|+++. +||+++.
T Consensus 286 ----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv~ 354 (405)
T PRK10125 286 ----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTVS 354 (405)
T ss_pred ----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEEC
Confidence 1 2222210 133333457899999999999 99999999999999999999977777666543 3666663
No 68
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.56 E-value=8.1e-07 Score=86.18 Aligned_cols=130 Identities=22% Similarity=0.237 Sum_probs=94.2
Q ss_pred CCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 469 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 469 ~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
...+.+++.++.|+...|+.++ ++.++.++.+-+. ..+.++|.|++..... +...++..+
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~~~~~~~--------~~~~~~~~~-- 70 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVGDGEYKKE--------LKNLIEKLN-- 70 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEESHCCHHHH--------HHHHHHHTT--
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEcccccccc--------ccccccccc--
Confidence 3467799999999999999999 9999988864211 2689999994433333 233333321
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 549 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 549 ~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
.+. +|.|+....-+--..++..||+++.||+ .|..|++-+-||..|.++|++.-|...|++... .||++|
T Consensus 71 --~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~ 140 (172)
T PF00534_consen 71 --LKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLF 140 (172)
T ss_dssp --CGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEE
T ss_pred --ccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc--cceEEe
Confidence 445 6888887776666778888999999999 799999999999999999999877776666442 345544
No 69
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.56 E-value=2.4e-06 Score=102.86 Aligned_cols=128 Identities=12% Similarity=0.166 Sum_probs=86.2
Q ss_pred CCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC----CcCCHHHHHHHHHHHHHHhhhcC
Q 004485 472 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA----FATYTNAKRIVKLVNDVGEVVNT 547 (749)
Q Consensus 472 ~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa----~P~y~~aK~iIk~I~~~a~~in~ 547 (749)
+..++..|.|++..|+... ++...+++++ . .|..+ ..+++++.|.+ -|.|. ++-+.+.+++.+||.
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~ll~--~-~p~~~---~~v~lv~v~~~sr~~~~~~~---~l~~~~~~~v~~in~ 333 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERFLE--K-NPEWR---GKVRLVQVAVPSRTGVPQYQ---EMKREIDELVGRING 333 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcchHHHH---HHHHHHHHHHHHHHh
Confidence 5578999999999999999 9999999865 3 34321 14677766532 24443 344566677766653
Q ss_pred CcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhc-----CceeeeecCchh
Q 004485 548 DPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGAN 611 (749)
Q Consensus 548 d~~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~N-----G~l~istlDG~~ 611 (749)
.-...+...|+++.+ .+-+---.+|++||+++.||. .|.=|+.-+-||.- |.+.+|+.-|+-
T Consensus 334 ~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 334 EFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred hcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchh
Confidence 211111113555554 455555678999999999999 89989888888887 567776644443
No 70
>PLN02949 transferase, transferring glycosyl groups
Probab=98.54 E-value=1.1e-06 Score=100.54 Aligned_cols=119 Identities=16% Similarity=0.130 Sum_probs=87.8
Q ss_pred CCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 472 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 472 ~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
+.+.+.++.||...|+.++ +++.+.++.+-. +. ...+..++++|.+. +.+..- .+.+.++++.. .
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~---~~~~~~LvIvG~~~~~~~~~~---~~eL~~la~~l----~ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKL---DA---DVPRPKLQFVGSCRNKEDEER---LQKLKDRAKEL----G 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---cc---cCCCcEEEEEeCCCCcccHHH---HHHHHHHHHHc----C
Confidence 3467788999999999999 999998876421 10 11257899999873 333321 22444555432 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD 608 (749)
+.+ +|.|+.+-.-+--..+++.||+++.||. .|.-|++-+-||..|+++|++-.
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~ 386 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNS 386 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCC
Confidence 566 7999988766666678899999999999 99999999999999999998743
No 71
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.51 E-value=5e-07 Score=93.92 Aligned_cols=170 Identities=17% Similarity=0.147 Sum_probs=113.3
Q ss_pred CCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 004485 472 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 551 (749)
Q Consensus 472 ~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~ 551 (749)
+...++++.|+...|+.+. ++..+.++.+ . . .++++++.|.+..... +.+..+..+ .
T Consensus 177 ~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~--------~~~~~~~~~----~ 233 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDL-LIEAWAKIAK--K-H-------PDWKLRIVGDGPEREA--------LEALIKELG----L 233 (348)
T ss_pred CCcEEEEEEeeccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEeCCCCHHH--------HHHHHHHcC----C
Confidence 4567889999999999999 8888877754 1 1 2689999998754322 222233221 3
Q ss_pred CCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhH-HHHHHhcCccEEeecCcc
Q 004485 552 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV-EIRQEIGEENFFLFGAVA 630 (749)
Q Consensus 552 ~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~v-E~~~~~Gg~n~~~fG~~~ 630 (749)
.. +|.|.. +. +-...+++.||+.+.||+ +|..|++-+-||..|.+.|++-.+... |+++. +++|++
T Consensus 234 ~~--~v~~~g-~~-~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~----- 300 (348)
T cd03820 234 ED--RVILLG-FT-KNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLL----- 300 (348)
T ss_pred CC--eEEEcC-Cc-chHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEE-----
Confidence 33 555554 43 445567888999999999 899999999999999999977433321 22211 123333
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCH
Q 004485 631 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 710 (749)
Q Consensus 631 d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~ 710 (749)
+.+.|.+++.+++. + +..|+
T Consensus 301 --------------------------------~~~~~~~~~~~~i~-------------------------~---ll~~~ 320 (348)
T cd03820 301 --------------------------------VPNGDVEALAEALL-------------------------R---LMEDE 320 (348)
T ss_pred --------------------------------eCCCCHHHHHHHHH-------------------------H---HHcCH
Confidence 33334566666554 2 34578
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHH
Q 004485 711 KKWLKMSILSTAGSGKFSSDRTIAQYA 737 (749)
Q Consensus 711 ~~W~~~~~~~ma~~g~FS~drsi~eY~ 737 (749)
+.+.+|..++.+..-.|||++.+++|.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 321 ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 888887777643334799999999885
No 72
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.45 E-value=5.2e-06 Score=97.63 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=78.3
Q ss_pred EeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcc
Q 004485 476 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 555 (749)
Q Consensus 476 ~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~l 555 (749)
..+|.|++..|+.+. ++..+..+.+ . ...++++++|.|.-. . .+.+.++.. . +
T Consensus 549 iLfVGRLa~EKGld~-LLeAla~L~~--~--------~pnvrLvIVGDGP~r-e-------eLe~la~eL------g--L 601 (794)
T PLN02501 549 AYFLGKMVWAKGYRE-LIDLLAKHKN--E--------LDGFNLDVFGNGEDA-H-------EVQRAAKRL------D--L 601 (794)
T ss_pred eEEEEcccccCCHHH-HHHHHHHHHh--h--------CCCeEEEEEcCCccH-H-------HHHHHHHHc------C--C
Confidence 567899999999999 8888776643 1 125899999988532 2 234444321 1 2
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchh
Q 004485 556 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 611 (749)
Q Consensus 556 kvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~ 611 (749)
+|.|+.. .+.+..+++++||+.+||+ .|.-|+.-+-||..|.+.|+|-.|.+
T Consensus 602 ~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~ 653 (794)
T PLN02501 602 NLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSN 653 (794)
T ss_pred EEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCC
Confidence 5777643 3455678999999999999 99999999999999999998855543
No 73
>PHA01630 putative group 1 glycosyl transferase
Probab=98.45 E-value=1.2e-06 Score=96.05 Aligned_cols=186 Identities=11% Similarity=-0.030 Sum_probs=118.6
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
.+++++++|+.++|+.++ ++..+.++.+ . . .+.++++.|.+ +... .+ .. +.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~--~-~-------~~~~llivG~~-~~~~-------~l---~~-------~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQN--E-G-------YDFYFLIKSSN-MLDP-------RL---FG-------LN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCc-ccch-------hh---cc-------cc
Confidence 357789999999999999 9998877654 1 1 25889999843 1111 01 00 22
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCcccc
Q 004485 553 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 632 (749)
Q Consensus 553 ~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~ 632 (749)
+ ...++ .-+--..++++||++++||+ .|+-|+.-+-||..|.+.|+|-.|.+-|++.+ ++||+++....-.
T Consensus 193 ~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~~~~~ 263 (331)
T PHA01630 193 G--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKSGRKP 263 (331)
T ss_pred c--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeeecccc
Confidence 2 11112 22344567899999999999 89999999999999999999999998887755 5788887533210
Q ss_pred chhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHH
Q 004485 633 VPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 712 (749)
Q Consensus 633 v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~ 712 (749)
.. .. -++ ...|.+.+.+.+++.+.+. ++.... ++++
T Consensus 264 ~~-~~----~~~-------------~~~G~~v~~~~~~~~~~ii-------------------------~~l~~~-~~~~ 299 (331)
T PHA01630 264 KL-WY----TNP-------------IHVGYFLDPDIEDAYQKLL-------------------------EALANW-TPEK 299 (331)
T ss_pred cc-cc----cCC-------------cccccccCCCHHHHHHHHH-------------------------HHHhCC-CHHH
Confidence 00 00 001 1345544556666666554 333221 1345
Q ss_pred HHHHHHHHhcc-CCCCChHHHHHHHHHHH
Q 004485 713 WLKMSILSTAG-SGKFSSDRTIAQYAKEI 740 (749)
Q Consensus 713 W~~~~~~~ma~-~g~FS~drsi~eY~~~i 740 (749)
+.+++.++-.. .-.|||++++++|.+-+
T Consensus 300 ~~~~~~~~~~~~~~~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 300 KKENLEGRAILYRENYSYNAIAKMWEKIL 328 (331)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55555544221 23899999999987643
No 74
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.43 E-value=1.5e-06 Score=93.06 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=78.0
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 553 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 553 (749)
.+++++.|+.++|+.++ ++..+.++.+ ++++++.|.+.......+ .+.+.. ...+
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l~~-------------~~~l~ivG~~~~~~~~~~----~~~~~~-------~~~~ 248 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKSNS-------------GKKLVIVGNADHNTPYGK----LLKEKA-------AADP 248 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhhcc-------------CceEEEEcCCCCcchHHH----HHHHHh-------CCCC
Confidence 45679999999999998 8777654311 578999999855443322 222111 1334
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCc-cCCCcchhhHhhcCceeeeecCchhHH
Q 004485 554 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVE 613 (749)
Q Consensus 554 ~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~-EasGTs~Mka~~NG~l~istlDG~~vE 613 (749)
+|.|+.-..-+-....+..||+++.||. . |.+|++-+-||..|.+.|+|-.|...|
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e 305 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNRE 305 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccce
Confidence 6777765444444456667899999998 6 999999999999999999885554433
No 75
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.38 E-value=6.6e-06 Score=90.08 Aligned_cols=122 Identities=11% Similarity=0.046 Sum_probs=82.6
Q ss_pred CeeEeEccccccc--ccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 473 SLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 473 ~~~~~~v~R~~ey--KR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
.+.++++.|+..+ |+.+. ++..+.++ + .++++++.|.+.. .+ .+.+.++..+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~-l~~a~~~~---~----------~~~~l~ivG~g~~-~~-------~l~~~~~~~~---- 233 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKE-LFDGLSQT---T----------GEWQLHIIGDGSD-FE-------KCKAYSRELG---- 233 (359)
T ss_pred CcEEEEEEEEecccCcCHHH-HHHHHHhh---C----------CCeEEEEEeCCcc-HH-------HHHHHHHHcC----
Confidence 4667899999754 77766 66654432 1 1689999998743 22 2344444321
Q ss_pred CCCcceEEEEcCCCH--HHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeec-CchhHHHHHHhcCccEEee
Q 004485 551 VNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~--~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istl-DG~~vE~~~~~Gg~n~~~f 626 (749)
+++ +|.|..--+. +.....++.||+++.||+ .|+.|++-.-||..|.+.|++- .|...|+++. +.||+++
T Consensus 234 l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv 306 (359)
T PRK09922 234 IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELY 306 (359)
T ss_pred CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEE
Confidence 555 6777754332 445567788999999999 9999999999999999999885 4555555543 3455555
No 76
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.36 E-value=6.9e-07 Score=88.11 Aligned_cols=120 Identities=18% Similarity=0.125 Sum_probs=95.3
Q ss_pred EcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceE
Q 004485 478 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 557 (749)
Q Consensus 478 ~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkv 557 (749)
++.|+..+|+.++ ++..+.++.+- . .+++++|.|++.+.+...+. +... ...+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~---~-------~~~~~~i~G~~~~~~~~~~~----~~~~--------~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKER---G-------PDLKLVIAGDGPEREYLEEL----LAAL--------LLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHh---C-------CCeEEEEEeCCCChHHHHHH----HHhc--------CCcc--cE
Confidence 8899999999999 98888887642 1 26899999999987765431 1111 1344 78
Q ss_pred EEEcCC-CHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 558 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 558 vF~~nY-n~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
.|+..+ ..+....++++||+.+.||+ .|++|++-+-||..|.+.|+|-+|++-|++.. +++||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 888887 67788888889999999999 89999999999999999999999999776544 3567664
No 77
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.36 E-value=1.2e-05 Score=84.88 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=88.0
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
.+.+.++++.|+..+|+.++ ++..+..+.+ . ++++++.|.+...+...+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~----------~~~l~i~G~~~~~~~~~~~~-------~-------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR--G----------DIELVIVGNGLELEEESYEL-------E-------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh--c----------CcEEEEEcCchhhhHHHHhh-------c--------
Confidence 34578899999999999999 8887776543 1 58999999987776642211 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHH
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 615 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~ 615 (749)
... +|.|....+-+....+++.||+.++||+ ..|.+|++-+-||..|.+.|+|--|..-|++
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i 302 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELV 302 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHh
Confidence 233 6888888877777889999999999986 2499999999999999999988656554444
No 78
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.30 E-value=8.6e-06 Score=91.32 Aligned_cols=228 Identities=17% Similarity=0.170 Sum_probs=148.7
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+....+..++.|.+||+-..+.+++ .|+ ..++++.-|.||++..... .
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~~-~~~----~~~~ki~vi~~gv~~~~~~---------------~------------ 223 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQK-RYP----AYKEKIKVSYLGVSDPGII---------------S------------ 223 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHH-HCC----CccccEEEEECCccccccc---------------C------------
Confidence 3344466789999999988877764 333 2345666677888754331 0
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
. ....+.+.+++++|+..+||.+. ++..+.++.+ . .|+
T Consensus 224 ----------------~-------------------~~~~~~~~il~~Grl~~~Kg~~~-li~a~~~l~~--~-~p~--- 261 (407)
T cd04946 224 ----------------K-------------------PSKDDTLRIVSCSYLVPVKRVDL-IIKALAALAK--A-RPS--- 261 (407)
T ss_pred ----------------C-------------------CCCCCCEEEEEeeccccccCHHH-HHHHHHHHHH--h-CCC---
Confidence 0 00123467899999999999999 9998888765 2 221
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCC-HHHHHhhc-cCcccccccCCCCccCC
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLI-PGSELSQHISTAGMEAS 589 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn-~~lA~~i~-~gaDv~l~~S~~~~Eas 589 (749)
..+.+++.|.+... . .+.++++.. ...+ +|.|+--.+ .++.+.+- +.+|++.+||. .|.-
T Consensus 262 --~~l~~~iiG~g~~~-~-------~l~~~~~~~----~~~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~ 323 (407)
T cd04946 262 --IKIKWTHIGGGPLE-D-------TLKELAESK----PENI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGL 323 (407)
T ss_pred --ceEEEEEEeCchHH-H-------HHHHHHHhc----CCCc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccc
Confidence 25677888876532 1 233333321 1233 677765443 34555544 35899999999 9999
Q ss_pred CcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChH
Q 004485 590 GTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYN 669 (749)
Q Consensus 590 GTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~ 669 (749)
|++-|-||..|.+.|+|--|...|++++ ++||+++-.. .+.+
T Consensus 324 p~~llEAma~G~PVIas~vgg~~e~i~~--~~~G~l~~~~------------------------------------~~~~ 365 (407)
T cd04946 324 PVSIMEAMSFGIPVIATNVGGTPEIVDN--GGNGLLLSKD------------------------------------PTPN 365 (407)
T ss_pred cHHHHHHHHcCCCEEeCCCCCcHHHhcC--CCcEEEeCCC------------------------------------CCHH
Confidence 9999999999999999977777666654 3455555321 1245
Q ss_pred HHHHHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 004485 670 PLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 737 (749)
Q Consensus 670 ~l~~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~ 737 (749)
++.++|. ++ ..|++.+.+|..++-... -.|||+...++|+
T Consensus 366 ~la~~I~-------------------------~l---l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLS-------------------------KF---IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHH-------------------------HH---HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 5555554 32 347777777776665542 3899999998876
No 79
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.20 E-value=1.5e-05 Score=88.47 Aligned_cols=224 Identities=7% Similarity=0.037 Sum_probs=137.5
Q ss_pred chhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 004485 354 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 433 (749)
Q Consensus 354 ~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 433 (749)
+..+..++.|-+||+.-.+.+++. + ...+.++.-|.||||...+ .|.
T Consensus 167 ~~~~~~ad~vi~~S~~~~~~l~~~-~----~~~~~~v~vipngvd~~~f----~~~------------------------ 213 (397)
T TIGR03087 167 RAIAARFDAATFVSRAEAELFRRL-A----PEAAGRITAFPNGVDADFF----SPD------------------------ 213 (397)
T ss_pred HHHHhhCCeEEEcCHHHHHHHHHh-C----CCCCCCeEEeecccchhhc----CCC------------------------
Confidence 445567899999999766665531 1 1224678888999998776 221
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHH-HHhhcCccccCC
Q 004485 434 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK-KLKEMSPQERKK 512 (749)
Q Consensus 434 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~-~i~~~~~~~~~~ 512 (749)
.+ . . ....++.++++++.|+..+|+.+. ++..+.... .++...
T Consensus 214 ----~~------~-~------------------~~~~~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~------ 257 (397)
T TIGR03087 214 ----RD------Y-P------------------NPYPPGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR------ 257 (397)
T ss_pred ----cc------c-c------------------CCCCCCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC------
Confidence 00 0 0 011245578899999999999987 765444322 222201
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcc
Q 004485 513 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS 592 (749)
Q Consensus 513 ~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs 592 (749)
.++++++.|.+.. . .+.+++. .. +|.|...-+ ++ ..++++||+++.||+. .|..|+.
T Consensus 258 -p~~~l~ivG~g~~--~-------~~~~l~~--------~~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~-~eG~~~~ 314 (397)
T TIGR03087 258 -PAAEFYIVGAKPS--P-------AVRALAA--------LP--GVTVTGSVA-DV-RPYLAHAAVAVAPLRI-ARGIQNK 314 (397)
T ss_pred -CCcEEEEECCCCh--H-------HHHHhcc--------CC--CeEEeeecC-CH-HHHHHhCCEEEecccc-cCCcccH
Confidence 2589999998753 1 1233332 12 355553333 34 4678999999999972 2556667
Q ss_pred hhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHH
Q 004485 593 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLL 672 (749)
Q Consensus 593 ~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~ 672 (749)
-+-||..|.+.|+|-.|.. +... ++ +.|.+.+.|.+++.
T Consensus 315 ~lEAma~G~PVV~t~~~~~--~i~~-~~--------------------------------------~~g~lv~~~~~~la 353 (397)
T TIGR03087 315 VLEAMAMAKPVVASPEAAE--GIDA-LP--------------------------------------GAELLVAADPADFA 353 (397)
T ss_pred HHHHHHcCCCEEecCcccc--cccc-cC--------------------------------------CcceEeCCCHHHHH
Confidence 8899999999998843311 0000 00 12221123456666
Q ss_pred HHHhcCCCCCCCccccccCCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 004485 673 DSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 738 (749)
Q Consensus 673 ~~l~~~~~~~~~d~~~~~~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~~ 738 (749)
+++. ....|++.+.+|..++-+.. ..|||++++++|.+
T Consensus 354 ~ai~----------------------------~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~ 392 (397)
T TIGR03087 354 AAIL----------------------------ALLANPAEREELGQAARRRVLQHYHWPRNLARLDA 392 (397)
T ss_pred HHHH----------------------------HHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6554 34568888888877765443 38999999999854
No 80
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.18 E-value=1.1e-05 Score=91.00 Aligned_cols=193 Identities=15% Similarity=0.094 Sum_probs=128.0
Q ss_pred hhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 004485 352 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 431 (749)
Q Consensus 352 m~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 431 (749)
+-.+++..|+.|-++|.--.+.+++ .|+. +.++.-|.|||+...+. |
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~-~~~~-----~~~~~vi~~gvd~~~~~----~----------------------- 228 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS-LWKR-----NTKPSIVYPPCDVEELL----K----------------------- 228 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH-HhCc-----CCCcEEEcCCCCHHHhc----c-----------------------
Confidence 4456778899999999865555553 2321 23677778888865441 0
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccC
Q 004485 432 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 511 (749)
Q Consensus 432 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~ 511 (749)
. - . ..+++.+.++++.|+...|+.++ +++.+.++.+- .|..
T Consensus 229 -------~------~-~-------------------~~~~~~~~il~vgr~~~~K~~~~-li~A~~~l~~~---~~~~-- 269 (419)
T cd03806 229 -------L------P-L-------------------DEKTRENQILSIAQFRPEKNHPL-QLRAFAKLLKR---LPEE-- 269 (419)
T ss_pred -------c------c-c-------------------ccccCCcEEEEEEeecCCCCHHH-HHHHHHHHHHh---Cccc--
Confidence 0 0 0 00234578999999999999999 99998887652 1210
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 004485 512 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 591 (749)
Q Consensus 512 ~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGT 591 (749)
...+++++++|.+...+.. +..+.+.++++..+ +.+ +|.|+..-+-+--..+++.||+++.+|. .|+-|.
T Consensus 270 ~~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l~----l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi 339 (419)
T cd03806 270 IKEKIKLVLIGSCRNEDDE--KRVEDLKLLAKELG----LED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGI 339 (419)
T ss_pred ccCceEEEEEcCCCCcccH--HHHHHHHHHHHHhC----CCC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCccc
Confidence 0025899999987544321 12234555555432 556 8999987666666788899999999999 899999
Q ss_pred chhhHhhcCceeeeecCch-hHHHHHHh-cCccEEee
Q 004485 592 SNMKFSLNGCLIIGTLDGA-NVEIRQEI-GEENFFLF 626 (749)
Q Consensus 592 s~Mka~~NG~l~istlDG~-~vE~~~~~-Gg~n~~~f 626 (749)
+-.-||..|.++|++-.|. ..|+++.. .|++||++
T Consensus 340 ~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 340 GVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred HHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 9999999999999886533 33444311 23455553
No 81
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.03 E-value=2.1e-05 Score=85.05 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=80.6
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 553 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 553 (749)
.++.++.|+..+|+++. ++..+.++ |+++++.|.+.... .+.+ . ..+
T Consensus 196 ~~il~~G~~~~~K~~~~-li~a~~~~---------------~~~l~ivG~g~~~~--------~l~~---~------~~~ 242 (351)
T cd03804 196 DYYLSVGRLVPYKRIDL-AIEAFNKL---------------GKRLVVIGDGPELD--------RLRA---K------AGP 242 (351)
T ss_pred CEEEEEEcCccccChHH-HHHHHHHC---------------CCcEEEEECChhHH--------HHHh---h------cCC
Confidence 45779999999999998 77765431 46799999875321 1111 1 234
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHH
Q 004485 554 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 615 (749)
Q Consensus 554 ~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~ 615 (749)
+|.|+..-+-+-...++++||+++.||+ |..|++-+-||..|.+.|++..|...|++
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i 299 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETV 299 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCccee
Confidence 7999988888888899999999999987 89999999999999999988666655444
No 82
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.98 E-value=4.7e-05 Score=87.14 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=88.7
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
.+...+|.|++..|+.+. ++..+.++.+ . . ..+.+++.|.|.-..+ +.+.++..+ +
T Consensus 228 ~~~~l~vGRL~~eK~~~~-Li~a~~~l~~--~-~-------~~~~l~ivGdGp~~~~--------L~~~a~~l~----l- 283 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKE-LLKLLHKHQK--E-L-------SGLEVDLYGSGEDSDE--------VKAAAEKLE----L- 283 (462)
T ss_pred ceEEEEEecCcccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEECCCccHHH--------HHHHHHhcC----C-
Confidence 345789999999999999 9888777654 1 1 2578999999943322 445554321 2
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEee
Q 004485 553 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 626 (749)
Q Consensus 553 ~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 626 (749)
.+.|+.++. ..+.+++++|||++||+ .|--|+.-+-||..|.+.|++-.|.+ |++.. +.|++++
T Consensus 284 ---~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~ 347 (462)
T PLN02846 284 ---DVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTY 347 (462)
T ss_pred ---cEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEec
Confidence 344566764 34579999999999999 99999999999999999999977764 65554 3566555
No 83
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=97.84 E-value=0.00016 Score=78.98 Aligned_cols=110 Identities=14% Similarity=0.052 Sum_probs=88.2
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
.+...++.++|+.--||.|| ++.+|.+..+- . ..+.|||+|-|-..+.. .++-++..
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~~---~-------p~vrfii~GDGPk~i~l--------ee~lEk~~---- 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCDK---H-------PEVRFIIIGDGPKRIDL--------EEMLEKLF---- 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHhc---C-------CCeeEEEecCCcccchH--------HHHHHHhh----
Confidence 34589999999999999999 99999998762 1 25899999999777663 33333321
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeec
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 607 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istl 607 (749)
..+ ||+++-.-.=+--+.++.-.|+|+|+|. .||=|+.-.-||--|=+.+||.
T Consensus 250 l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTr 302 (426)
T KOG1111|consen 250 LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTR 302 (426)
T ss_pred ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEee
Confidence 455 8999887766666666666699999999 9999999999999999999993
No 84
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.70 E-value=0.0026 Score=73.44 Aligned_cols=137 Identities=13% Similarity=0.101 Sum_probs=92.6
Q ss_pred HHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCc-CCHHHHHHHHHHH
Q 004485 461 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA-TYTNAKRIVKLVN 539 (749)
Q Consensus 461 i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P-~y~~aK~iIk~I~ 539 (749)
+++++| +..++..|.|+..-||... .|...+++++ + +|..+ ..+++|..|.+.- .-..-.++.+.+.
T Consensus 278 lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~--~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~~v~ 345 (487)
T TIGR02398 278 IRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLE--R-RPELL---GKVTLVTACVPAASGMTIYDELQGQIE 345 (487)
T ss_pred HHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEeCCCcccchHHHHHHHHHH
Confidence 335666 3568889999999999999 9999999875 4 55532 2477777665542 2223345668888
Q ss_pred HHHhhhcCCcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHh-----hcCceeeeecCchh
Q 004485 540 DVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-----LNGCLIIGTLDGAN 611 (749)
Q Consensus 540 ~~a~~in~d~~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~-----~NG~l~istlDG~~ 611 (749)
+++.+||..=.-.+---|+++.+ +.-+---.+|..|||++-||+ .|.=++.-.-++ ..|.|.+|-.-|+-
T Consensus 346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGaa 421 (487)
T TIGR02398 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGAA 421 (487)
T ss_pred HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccch
Confidence 88998875422222223555555 466666779999999999999 776665554443 35788887655544
No 85
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.25 E-value=0.011 Score=72.87 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=79.6
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEE---ecC-CcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG---GKA-FATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~---GKa-~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
..++.-|-|+..-|+... .|...+++++ + +|.-+ ..+++|=. -.. -|.|. ++-+.+.+++.+||..
T Consensus 363 ~kiIlgVDRLD~~KGI~~-kL~AfE~fL~--~-~Pe~r---~kVVLvQIa~psr~~v~eY~---~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQ-KILAFEKFLE--E-NPEWR---DKVVLLQIAVPTRTDVPEYQ---KLTSQVHEIVGRINGR 432 (934)
T ss_pred ceEEEEeeccccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEcCCCCCCcHHHH---HHHHHHHHHHHHHhhh
Confidence 458889999999999998 9999999865 3 45532 12333322 211 24444 3446677778887743
Q ss_pred cCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHhhc-----CceeeeecCch
Q 004485 549 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGA 610 (749)
Q Consensus 549 ~~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~N-----G~l~istlDG~ 610 (749)
=...+..-|.++.. +..+----+|.+|||++.||. .|--++--+-+|.- |+|.+|-.-|+
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGa 498 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGA 498 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCch
Confidence 21222223665544 444444468999999999999 77767766666554 77777544333
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=97.07 E-value=0.0035 Score=69.46 Aligned_cols=136 Identities=14% Similarity=0.109 Sum_probs=92.4
Q ss_pred eeEeEcccccccccccchhhhHHHHHHHHhhcCccc-------cCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhc
Q 004485 474 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 546 (749)
Q Consensus 474 ~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~-------~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in 546 (749)
.++..+.|+..+|+.+. ++..+..+......-... .....+++|++.|.|.-. + .+.+.++..+
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-~-------~l~~~~~~~~ 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK-A-------MYEEKISRLN 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCH-H-------HHHHHHHHcC
Confidence 45668899999999999 888877764211000000 000125899999998532 2 2333333211
Q ss_pred CCcCCCCcceEEEEcCC-CHHHHHhhccCcccccccCCCC-ccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEE
Q 004485 547 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 624 (749)
Q Consensus 547 ~d~~~~~~lkvvF~~nY-n~~lA~~i~~gaDv~l~~S~~~-~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~ 624 (749)
+. +|+|..+| ..+--..++++||+++.++... .|..|..-+-||.-|.+.|+|..|...|++++ ++|||
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G~ 355 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNGL 355 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCeE
Confidence 33 48888774 4555567899999998754321 27778888999999999999999999888876 57899
Q ss_pred eec
Q 004485 625 LFG 627 (749)
Q Consensus 625 ~fG 627 (749)
++.
T Consensus 356 lv~ 358 (371)
T PLN02275 356 LFS 358 (371)
T ss_pred EEC
Confidence 986
No 87
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.03 E-value=0.012 Score=60.11 Aligned_cols=118 Identities=18% Similarity=0.199 Sum_probs=82.4
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
...+.++.|+.+.|+.++ ++..+..+.+.. ....+++.|.+... ++ .+..+..... ..
T Consensus 199 ~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~----------~~~~~~~~g~~~~~----~~---~~~~~~~~~~----~~ 256 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDL-LIEAAAKLKKRG----------PDIKLVIVGDGPER----RE---ELEKLAKKLG----LE 256 (381)
T ss_pred ceEEEEeeccChhcCHHH-HHHHHHHhhhhc----------CCeEEEEEcCCCcc----HH---HHHHHHHHhC----CC
Confidence 478889999999999999 888877765411 12789999998876 11 1222333211 12
Q ss_pred CcceEEEEcCCC-HHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHH
Q 004485 553 SYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 617 (749)
Q Consensus 553 ~~lkvvF~~nYn-~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~ 617 (749)
. +|.|+-.-. ..+.. ++..||++++||. .|+-|..-+-||..|++.|++.=|...|++.+
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~ 317 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVED 317 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcC
Confidence 3 577743334 45555 8888899999999 69999999999999988888766666555433
No 88
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=96.96 E-value=0.0049 Score=70.72 Aligned_cols=132 Identities=17% Similarity=0.107 Sum_probs=91.9
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEec--CCcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK--AFATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GK--a~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
-...|+.-+-||..-|+++| ++.+..++..... +++ ......+|+|+ -.+...+-.+.++.+.++.+..+
T Consensus 271 ~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-- 342 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-- 342 (495)
T ss_pred ccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC--
Confidence 34588889999999999999 9998877765322 222 23567778873 35666666777888888888643
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHH
Q 004485 549 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 615 (749)
Q Consensus 549 ~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~ 615 (749)
...+ .|.|+.--+=.---++++-|.+.+-+|. .|+=|+--.-||-.|-+.|+|--|-=+||+
T Consensus 343 -l~g~--~v~~~~s~~~~~~yrl~adt~~v~~qPa--~E~FGiv~IEAMa~glPvvAt~~GGP~EiV 404 (495)
T KOG0853|consen 343 -LLGQ--FVWFLPSTTRVAKYRLAADTKGVLYQPA--NEHFGIVPIEAMACGLPVVATNNGGPAEIV 404 (495)
T ss_pred -ccCc--eEEEecCCchHHHHHHHHhcceEEecCC--CCCccceeHHHHhcCCCEEEecCCCceEEE
Confidence 1234 5666666555444555556666665555 899999999999999999999544444444
No 89
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=96.22 E-value=0.25 Score=54.39 Aligned_cols=110 Identities=14% Similarity=-0.014 Sum_probs=65.4
Q ss_pred eeEeEcccc-cccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 004485 474 LFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 552 (749)
Q Consensus 474 ~~~~~v~R~-~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~ 552 (749)
.+.+...|. ...|+... ++..+.++.+ . . .+++++|.|-+.| ...+ .+ .+... ..
T Consensus 199 ~vl~~~hr~~~~~k~~~~-ll~a~~~l~~--~-~-------~~~~~vi~~~~~~--~~~~----~~---~~~~~----~~ 254 (365)
T TIGR00236 199 YILLTLHRRENVGEPLEN-IFKAIREIVE--E-F-------EDVQIVYPVHLNP--VVRE----PL---HKHLG----DS 254 (365)
T ss_pred EEEEecCchhhhhhHHHH-HHHHHHHHHH--H-C-------CCCEEEEECCCCh--HHHH----HH---HHHhC----CC
Confidence 455555554 23466666 7777776643 1 1 1467888753333 2111 11 22111 23
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC-chhHHHHH
Q 004485 553 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQ 616 (749)
Q Consensus 553 ~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD-G~~vE~~~ 616 (749)
+ +|.|+...+..---.+++.||+++.+| |+.++-||.-|.+.|.+.+ |.+.|+++
T Consensus 255 ~--~v~~~~~~~~~~~~~~l~~ad~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~ 310 (365)
T TIGR00236 255 K--RVHLIEPLEYLDFLNLAANSHLILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETVE 310 (365)
T ss_pred C--CEEEECCCChHHHHHHHHhCCEEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHHh
Confidence 3 688887655544457789999987554 6668999999999998754 44445443
No 90
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.14 E-value=0.045 Score=60.66 Aligned_cols=161 Identities=10% Similarity=0.019 Sum_probs=95.6
Q ss_pred chhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccccccCChhhhHHHHhhcCccccccChhhH
Q 004485 351 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 430 (749)
Q Consensus 351 nm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 430 (749)
.+....+..|+.|-++|+.-.+.++.. ..++.-|.||||...+ .|.. .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~---------~~~i~~i~ngvd~~~f----~~~~--------~----------- 192 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRRL---------NPNVVLVPNGVDYEHF----AAAR--------D----------- 192 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhhC---------CCCEEEcccccCHHHh----hccc--------c-----------
Confidence 344556677899999999766554421 1567778999998776 2210 0
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCcccc
Q 004485 431 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 510 (749)
Q Consensus 431 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~ 510 (749)
... ..+ .+. ..+.+.++++.++.+.+..+| +..+.+ . .
T Consensus 193 ------~~~--------~~~-----~~~-----------~~~~~~i~y~G~l~~~~d~~l-----l~~la~--~-~---- 230 (373)
T cd04950 193 ------PPP--------PPA-----DLA-----------ALPRPVIGYYGAIAEWLDLEL-----LEALAK--A-R---- 230 (373)
T ss_pred ------cCC--------Chh-----HHh-----------cCCCCEEEEEeccccccCHHH-----HHHHHH--H-C----
Confidence 000 000 000 124578999999998433333 222322 1 1
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc---c
Q 004485 511 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM---E 587 (749)
Q Consensus 511 ~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~---E 587 (749)
...+|+|.|.+++..... .+. .. . +|.|+.--.-+-....++++|+.++|++..- +
T Consensus 231 ---p~~~~vliG~~~~~~~~~--------~~~-------~~-~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~ 289 (373)
T cd04950 231 ---PDWSFVLIGPVDVSIDPS--------ALL-------RL-P--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRA 289 (373)
T ss_pred ---CCCEEEEECCCcCccChh--------Hhc-------cC-C--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhc
Confidence 157999999884333221 111 12 2 5888775555556678899999999998432 2
Q ss_pred CCCcchhhHhhcCceeeee
Q 004485 588 ASGTSNMKFSLNGCLIIGT 606 (749)
Q Consensus 588 asGTs~Mka~~NG~l~ist 606 (749)
.+++--+-+|.-|.+.|+|
T Consensus 290 ~~P~Kl~EylA~G~PVVat 308 (373)
T cd04950 290 TSPLKLFEYLAAGKPVVAT 308 (373)
T ss_pred CCcchHHHHhccCCCEEec
Confidence 2333344588999999977
No 91
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=95.97 E-value=0.012 Score=65.87 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=75.5
Q ss_pred ccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccc-cCCCcccccccCChhhhHHHHhhcCccccccCh
Q 004485 349 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKT-NGITPRRWLRFCNPELSKIITKWLKTDQWVTNL 427 (749)
Q Consensus 349 ~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~It-NGI~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~ 427 (749)
+.-|-.+|..++|.-+|||++-+-+... +...|-..|| ||...-.+.+
T Consensus 242 rYC~ERaa~h~AhVFTTVSeITa~EAeH--------lLkRKPD~itPNGLNV~KFsA----------------------- 290 (692)
T KOG3742|consen 242 RYCLERAAAHTAHVFTTVSEITALEAEH--------LLKRKPDVITPNGLNVKKFSA----------------------- 290 (692)
T ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHHHH--------HHhcCCCeeCCCCcceeehhH-----------------------
Confidence 5688899999999999999987755432 1112223332 7777655521
Q ss_pred hhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCCeeEeEcccc-cccccccchhhhHHHHHHHHh
Q 004485 428 DLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLK 503 (749)
Q Consensus 428 ~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g--~~~d-~~~~~~~~v~R~-~eyKR~~Lnil~~i~~l~~i~ 503 (749)
+ .+ ++..|..+|.+..++|+-++. +++| ...++.-.+.|. -..||+|+ .+..+.||..++
T Consensus 291 ---------~--HE----FQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDm-FiEsLaRLN~~L 354 (692)
T KOG3742|consen 291 ---------V--HE----FQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADM-FIESLARLNYLL 354 (692)
T ss_pred ---------H--HH----HHHHHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHH-HHHHHHHhHHHH
Confidence 1 11 456789999999999998873 3333 245666566776 46799999 999999999765
Q ss_pred h
Q 004485 504 E 504 (749)
Q Consensus 504 ~ 504 (749)
.
T Consensus 355 k 355 (692)
T KOG3742|consen 355 K 355 (692)
T ss_pred e
Confidence 5
No 92
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=95.39 E-value=0.031 Score=51.92 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=64.5
Q ss_pred CCeeEeEcccccccccccchhhh-HHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 004485 472 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 550 (749)
Q Consensus 472 ~~~~~~~v~R~~eyKR~~Lnil~-~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~ 550 (749)
|.++++.+.+++.+|+.+. +++ ++.++.+ . . .+++++|.|.+.+ . +.++.
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~--~-~-------p~~~l~i~G~~~~--~--------l~~~~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKE--K-H-------PDIELIIIGNGPD--E--------LKRLR-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHH--H-S-------TTEEEEEECESS---H--------HCCHH--------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHH--H-C-------cCEEEEEEeCCHH--H--------HHHhc--------
Confidence 4588999999999999998 888 8877765 2 1 2599999999555 1 22221
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC
Q 004485 551 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 551 ~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD 608 (749)
.+ +|.|.... .++ ..++++||+.+.|++. -|.+++.-+-+|..|.+.|++-.
T Consensus 52 ~~---~v~~~g~~-~e~-~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 52 RP---NVRFHGFV-EEL-PEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp HC---TEEEE-S--HHH-HHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH
T ss_pred CC---CEEEcCCH-HHH-HHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc
Confidence 11 68888887 455 4557889999998862 34677888999999999997743
No 93
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.37 E-value=0.38 Score=56.40 Aligned_cols=177 Identities=14% Similarity=0.135 Sum_probs=110.5
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc-
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP- 549 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~- 549 (749)
+..++-+.|-|+ +.|..+- ++..+.++.+ . +| .+++.|-|.+.+... .+.+-+.|.++....+.+.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~--~-~p-------~~~L~~~gy~~~~~~-~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYIL--K-NP-------DYELKILTYNNDNDI-TQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHh--h-CC-------CeEEEEEEecCchhH-HHHHHHHHHHHHhhhchhhh
Confidence 344555556699 9999999 8888888875 2 22 588999999965222 2222223333322110000
Q ss_pred -----------------CCCCcceEEEEcCCCH--HHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCch
Q 004485 550 -----------------EVNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 610 (749)
Q Consensus 550 -----------------~~~~~lkvvF~~nYn~--~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~ 610 (749)
+-......+.+.+|-- ++. ..+.-+.+.+.+|+ .|.=| ++|-|+--|.+.|-- |.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqIny--g~ 459 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQINK--VE 459 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCeeec--CC
Confidence 0000003677778777 676 67788899999999 88888 899999999887710 10
Q ss_pred hHHHHHHhcCccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhcCCCCCCCcccccc
Q 004485 611 NVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVG 690 (749)
Q Consensus 611 ~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~d~~~~~ 690 (749)
-|.++. |+||++.| +.++|.++|
T Consensus 460 -~~~V~d--~~NG~li~---------------------------------------d~~~l~~al--------------- 482 (519)
T TIGR03713 460 -TDYVEH--NKNGYIID---------------------------------------DISELLKAL--------------- 482 (519)
T ss_pred -ceeeEc--CCCcEEeC---------------------------------------CHHHHHHHH---------------
Confidence 111111 24444441 233443333
Q ss_pred CCchHHHHHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHH
Q 004485 691 YDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQY 736 (749)
Q Consensus 691 ~df~~y~~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY 736 (749)
..+..+++.|.++...++..+..||++.-+.+.
T Consensus 483 -------------~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW 515 (519)
T TIGR03713 483 -------------DYYLDNLKNWNYSLAYSIKLIDDYSSENIIERL 515 (519)
T ss_pred -------------HHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 334478999999999999988899999887653
No 94
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=94.17 E-value=0.46 Score=53.45 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=66.9
Q ss_pred CCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh--hhcCCc
Q 004485 472 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE--VVNTDP 549 (749)
Q Consensus 472 ~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~--~in~d~ 549 (749)
+.++++++++. .|+.++ ++..+.++.+ . . ..+.+|++|.+ |.. ..++.+.+.+..- ..-...
T Consensus 232 ~~~vil~~~~~--~~~~~~-ll~A~~~l~~--~-~-------~~~~liivG~g-~~r--~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 232 NRPVWIAASTH--EGEEEL-VLDAHRALLK--Q-F-------PNLLLILVPRH-PER--FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred CCcEEEEeCCC--chHHHH-HHHHHHHHHH--h-C-------CCcEEEEcCCC-hhh--HHHHHHHHHhCCCcEEEccCC
Confidence 44666777764 466777 7787776643 1 1 25789999974 422 2333344433210 000000
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccc-cCCCCccCCCcchhhHhhcCceeeee
Q 004485 550 EVNSYLKVVFVPNYNVSVAELLIPGSELSQH-ISTAGMEASGTSNMKFSLNGCLIIGT 606 (749)
Q Consensus 550 ~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~-~S~~~~EasGTs~Mka~~NG~l~ist 606 (749)
..+..-..+++.+.--++ ..+|++||+... +|. .|..|++-+-||..|.+.|++
T Consensus 296 ~~~~~~~~v~l~~~~~el-~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g 350 (425)
T PRK05749 296 EPPSADTDVLLGDTMGEL-GLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISG 350 (425)
T ss_pred CCCCCCCcEEEEecHHHH-HHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEEC
Confidence 000000134444433344 478899999554 666 688999999999999999965
No 95
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=93.91 E-value=4.6 Score=46.96 Aligned_cols=129 Identities=11% Similarity=0.038 Sum_probs=80.8
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPEV 551 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~I~~~a~~in~d~~~ 551 (749)
.-++.-|-|+.--||... =|...+++++ . .|.-+ ..+++|=.+... ..-..-+++-+.|.+++.+||..=.-
T Consensus 255 ~~lilgVDRLDytKGi~~-rl~Afe~fL~--~-~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 346678999999999988 8888999876 3 56643 234454332211 11122235567888889888854333
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcch----hhHh----hcCceeeeecCchhH
Q 004485 552 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSN----MKFS----LNGCLIIGTLDGANV 612 (749)
Q Consensus 552 ~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~----Mka~----~NG~l~istlDG~~v 612 (749)
.+-.-|.++.. ++-+.---+|.+|||.+-+|.|- |.+= ..|+ ..|+|.+|-.-|+--
T Consensus 328 ~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRD----GMNLVAkEyva~q~~~~~GvLILSefAGaA~ 393 (474)
T PRK10117 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRD----GMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 393 (474)
T ss_pred CCceeEEEecCCCCHHHHHHHHHhccEEEeccccc----ccccccchheeeecCCCCccEEEecccchHH
Confidence 33334666654 44444347899999999999942 2220 0012 348999988888763
No 96
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=93.60 E-value=1.1 Score=49.46 Aligned_cols=43 Identities=12% Similarity=0.103 Sum_probs=31.4
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeee
Q 004485 556 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 606 (749)
Q Consensus 556 kvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~ist 606 (749)
+|.|+ +|-..+ ..++++||++. + ++.|++-+-||..|.+.|++
T Consensus 257 ~v~~~-g~~~~~-~~l~~~aD~~v--~----~~gg~t~~EA~a~g~PvI~~ 299 (380)
T PRK13609 257 ALKVF-GYVENI-DELFRVTSCMI--T----KPGGITLSEAAALGVPVILY 299 (380)
T ss_pred cEEEE-echhhH-HHHHHhccEEE--e----CCCchHHHHHHHhCCCEEEC
Confidence 57666 554344 46789999986 2 45677778999999998865
No 97
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=92.50 E-value=1 Score=52.28 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=71.0
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEec-CCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPEV 551 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GK-a~P~y~~aK~iIk~I~~~a~~in~d~~~ 551 (749)
.-+++-|-|+..-||..+ -|.+.+++++ + +|..+ ..+++|=.+- +-..-..-.++-+.+.+++.+||..=.-
T Consensus 276 ~~ii~gvDrld~~kGi~~-kl~Afe~fL~--~-~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~ 348 (474)
T PF00982_consen 276 RKIIVGVDRLDYTKGIPE-KLRAFERFLE--R-YPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGT 348 (474)
T ss_dssp SEEEEEE--B-GGG-HHH-HHHHHHHHHH--H--GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-B
T ss_pred cEEEEEeccchhhcCHHH-HHHHHHHHHH--h-CcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhccc
Confidence 467889999999999998 9999999976 4 67654 2455553332 2223333446778888888888863222
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhhHh--------hcCceeeeecCchh
Q 004485 552 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS--------LNGCLIIGTLDGAN 611 (749)
Q Consensus 552 ~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~--------~NG~l~istlDG~~ 611 (749)
.+.--|.++.. .+.+--=-++..||+.+-+|.+ .|.+- -|. ..|+|.+|..-|+-
T Consensus 349 ~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslr----DGmNL-va~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 349 PDWTPIIYIYRSLSFEELLALYRAADVALVTSLR----DGMNL-VAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp TTB-SEEEE-S---HHHHHHHHHH-SEEEE--SS----BS--H-HHHHHHHHS-TS--EEEEETTBGGG
T ss_pred CCceeEEEEecCCCHHHHHHHHHhhhhEEecchh----hccCC-cceEEEEEecCCCCceEeeccCCHH
Confidence 22224777776 4444444578999999999993 34432 111 45888888766654
No 98
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=92.01 E-value=2.9 Score=45.58 Aligned_cols=164 Identities=11% Similarity=-0.008 Sum_probs=96.6
Q ss_pred CCCCeeEeEccccccccccc-chhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 470 DPNSLFDIQVKRIHEYKRQL-LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 470 d~~~~~~~~v~R~~eyKR~~-Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
+++.+++.++.|....|... + +...+.++. . .+..+++.|.+.. +. +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~-l~~a~~~~~---~---------~~~~~~~~G~g~~--~~---~~~~~-~-~------ 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEA-VPEALALLP---E---------ALQVIHQTGKGDL--EE---VRAAY-A-A------ 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHhh---h---------CcEEEEEcCCCcH--HH---HHHHh-h-c------
Confidence 35667778888888777643 3 335544432 1 1456777888753 21 11111 1 1
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCc--------hhHHHHHHhcC
Q 004485 549 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG--------ANVEIRQEIGE 620 (749)
Q Consensus 549 ~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG--------~~vE~~~~~Gg 620 (749)
.+ + +.+.+|- +--..++++||+++..|- +.+-+-||.-|.+.|++-.| ++.|.+.+.
T Consensus 234 -~~----~-v~~~g~~-~~~~~~~~~~d~~i~~~g------~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-- 298 (357)
T PRK00726 234 -GI----N-AEVVPFI-DDMAAAYAAADLVICRAG------ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-- 298 (357)
T ss_pred -CC----c-EEEeehH-hhHHHHHHhCCEEEECCC------HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC--
Confidence 11 4 4455664 334578899999996441 24566999999999988542 122222221
Q ss_pred ccEEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCC--ChHHHHHHHhcCCCCCCCccccccCCchHHH
Q 004485 621 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSY--DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYL 697 (749)
Q Consensus 621 ~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-F~~~--~~~~l~~~l~~~~~~~~~d~~~~~~df~~y~ 697 (749)
+.|. ..+. ++++|.+++.
T Consensus 299 --------------------------------------~~g~~~~~~~~~~~~l~~~i~--------------------- 319 (357)
T PRK00726 299 --------------------------------------GAALLIPQSDLTPEKLAEKLL--------------------- 319 (357)
T ss_pred --------------------------------------CCEEEEEcccCCHHHHHHHHH---------------------
Confidence 2221 1111 2566666554
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 004485 698 EAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 740 (749)
Q Consensus 698 ~~~~~~~~~Y~d~~~W~~~~~~~ma~~g~FS~drsi~eY~~~i 740 (749)
..+.|++...+|..++....-.|+.++.++.+.+.+
T Consensus 320 -------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 320 -------ELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred -------HHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 345677777777777766555899999999987654
No 99
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=91.58 E-value=1.4 Score=49.05 Aligned_cols=110 Identities=9% Similarity=-0.050 Sum_probs=65.6
Q ss_pred HHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeE-EEEEecCCcCCHHHHHHHHHHHHH
Q 004485 463 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDV 541 (749)
Q Consensus 463 ~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q-~If~GKa~P~y~~aK~iIk~I~~~ 541 (749)
+++|++ |+.+++.++.|....|+... ++..+........ . ...+.| ++++|+..+.+. .+.+.
T Consensus 198 ~~~gl~--~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~-~-----~~~~~~~~vi~G~~~~~~~-------~L~~~ 261 (382)
T PLN02605 198 RELGMD--EDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN-L-----GKPIGQVVVICGRNKKLQS-------KLESR 261 (382)
T ss_pred HHcCCC--CCCcEEEEECCCcccccHHH-HHHHHHHhhcccc-c-----cCCCceEEEEECCCHHHHH-------HHHhh
Confidence 466754 77899999999999998766 6555543321000 0 012354 678887632111 22222
Q ss_pred HhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeee
Q 004485 542 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 606 (749)
Q Consensus 542 a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~ist 606 (749)
+ ... +|.| .+|-..+. .++++||+++..| .|++-+-||.-|.+.|+|
T Consensus 262 ~--------~~~--~v~~-~G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~ 308 (382)
T PLN02605 262 D--------WKI--PVKV-RGFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILN 308 (382)
T ss_pred c--------ccC--CeEE-EeccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEe
Confidence 1 112 3333 34433444 5679999999643 356678999999999977
No 100
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=91.37 E-value=1.5 Score=49.16 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=58.4
Q ss_pred HhCCCCCCCCe-eEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEE-EEecCCcCCHHHHHHHHHHHHH
Q 004485 464 VTGVTIDPNSL-FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM-IGGKAFATYTNAKRIVKLVNDV 541 (749)
Q Consensus 464 ~~g~~~d~~~~-~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~I-f~GKa~P~y~~aK~iIk~I~~~ 541 (749)
++|++ ++.+ +..++.|+...|+.+. ++.. +.+ . . .+++++ ++|+....++ .+
T Consensus 195 ~~~l~--~~~~~ilv~~G~lg~~k~~~~-li~~---~~~--~-~-------~~~~~vvv~G~~~~l~~-------~l--- 248 (391)
T PRK13608 195 DNNLD--PDKQTILMSAGAFGVSKGFDT-MITD---ILA--K-S-------ANAQVVMICGKSKELKR-------SL--- 248 (391)
T ss_pred HcCCC--CCCCEEEEECCCcccchhHHH-HHHH---HHh--c-C-------CCceEEEEcCCCHHHHH-------HH---
Confidence 56654 4444 4567899987777665 4443 222 1 1 146774 4565421111 12
Q ss_pred HhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeee
Q 004485 542 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 606 (749)
Q Consensus 542 a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~ist 606 (749)
.+..+ ..+ +|.| .+|-..+ ..++++||+++. +|.|++-.-||..|.+.|.+
T Consensus 249 ~~~~~----~~~--~v~~-~G~~~~~-~~~~~~aDl~I~------k~gg~tl~EA~a~G~PvI~~ 299 (391)
T PRK13608 249 TAKFK----SNE--NVLI-LGYTKHM-NEWMASSQLMIT------KPGGITISEGLARCIPMIFL 299 (391)
T ss_pred HHHhc----cCC--CeEE-EeccchH-HHHHHhhhEEEe------CCchHHHHHHHHhCCCEEEC
Confidence 22111 112 4543 4565444 556799999983 34577778999999998876
No 101
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=91.01 E-value=2.7 Score=52.29 Aligned_cols=107 Identities=10% Similarity=0.046 Sum_probs=69.3
Q ss_pred CCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCc
Q 004485 471 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDP 549 (749)
Q Consensus 471 ~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~I~~~a~~in~d~ 549 (749)
++..++.-|-|+.--||..+ =|...+++++ + +|..+ ..+++|=..... -.-..-+++-+.|.+++.+||..=
T Consensus 337 ~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~--~-~P~~~---gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~f 409 (854)
T PLN02205 337 QDRIMLLGVDDMDIFKGISL-KLLAMEQLLM--Q-HPEWQ---GKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETF 409 (854)
T ss_pred CCCEEEEEccCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 34568889999999999999 8888999876 4 56643 234444332211 111222345577888888888543
Q ss_pred CCCCcceEEEEcC-CCHHHHHhhccCcccccccCCC
Q 004485 550 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTA 584 (749)
Q Consensus 550 ~~~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~ 584 (749)
.-.+.--|.++.. +..+----+|..||+.+-+|+|
T Consensus 410 g~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lR 445 (854)
T PLN02205 410 GKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVR 445 (854)
T ss_pred CCCCCceEEEEecCCCHHHHHHHHHhccEEEecccc
Confidence 3334335777744 4444444579999999999985
No 102
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=89.87 E-value=16 Score=42.66 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=81.8
Q ss_pred CeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEe-cCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 004485 473 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFATYTNAKRIVKLVNDVGEVVNTDPEV 551 (749)
Q Consensus 473 ~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~G-Ka~P~y~~aK~iIk~I~~~a~~in~d~~~ 551 (749)
.-++.-+-|+..-||..- =+...+||++ + +|..+. .+.+|=.+ ...+.-+.-+.+-+.|..++.+||..=--
T Consensus 282 ~kiivgvDRlDy~kGi~~-rl~Afe~lL~--~-~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~ 354 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQ-RLLAFERLLE--E-YPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354 (486)
T ss_pred ceEEEEehhcccccCcHH-HHHHHHHHHH--h-ChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 356667889999999876 7788888875 3 566542 34444333 33334443466778889999988853222
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchh----hHh---hcCceeeeecCchhHH
Q 004485 552 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNM----KFS---LNGCLIIGTLDGANVE 613 (749)
Q Consensus 552 ~~~lkvvF~~n-Yn~~lA~~i~~gaDv~l~~S~~~~EasGTs~M----ka~---~NG~l~istlDG~~vE 613 (749)
.+.--|.|+.- .+-..--.++..||+.+-+|+| .|.+-+ .|+ .+|+|.+|-.-|+--|
T Consensus 355 ~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplr----DGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~ 420 (486)
T COG0380 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLR----DGMNLVAKEYVAAQRDKPGVLILSEFAGAASE 420 (486)
T ss_pred CCcceeEEEeccCCHHHHHHHHhhhceeeecccc----ccccHHHHHHHHhhcCCCCcEEEeccccchhh
Confidence 22223555433 4444444588999999999994 344322 122 3699999887776643
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=89.71 E-value=0.26 Score=45.90 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=44.2
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 319 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~~l~~~~lp~~~~ii~~in~~ 319 (749)
.+||+||+|.++++++ ..++|.. .+..+++|.|+........|...++.
T Consensus 72 ~~~Dvv~~~~~~~~~~-~~~~~~~--------------~~~p~v~~~h~~~~~~~~~~~~~~~~---------------- 120 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLV-AALARRR--------------RGIPLVVTVHGTLFRRGSRWKRRLYR---------------- 120 (160)
T ss_dssp ---SEEEEEHHHHHHH-HHHHHHH--------------HT--EEEE-SS-T------HHHHHHH----------------
T ss_pred cCCeEEEecccchhHH-HHHHHHc--------------cCCcEEEEECCCchhhccchhhHHHH----------------
Confidence 5789999999887765 4555522 24679999997443221111111111
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccC
Q 004485 320 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNG 396 (749)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~iie~~~~~~~vnm~~lai~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNG 396 (749)
.+....+..|+.|-++|+--.+.+.+ + ++-++|+.-|-||
T Consensus 121 -------------------------------~~~~~~~~~ad~vi~~S~~~~~~l~~--~----g~~~~ri~vipnG 160 (160)
T PF13579_consen 121 -------------------------------WLERRLLRRADRVIVVSEAMRRYLRR--Y----GVPPDRIHVIPNG 160 (160)
T ss_dssp -------------------------------HHHHHHHHH-SEEEESSHHHHHHHHH--H-------GGGEEE----
T ss_pred -------------------------------HHHHHHHhcCCEEEECCHHHHHHHHH--h----CCCCCcEEEeCcC
Confidence 12234556789999999988877764 2 2345678877787
No 104
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=86.95 E-value=9.6 Score=41.04 Aligned_cols=101 Identities=13% Similarity=0.054 Sum_probs=57.0
Q ss_pred CCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEE-EEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 004485 470 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI-MIGGKAFATYTNAKRIVKLVNDVGEVVNTD 548 (749)
Q Consensus 470 d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~-If~GKa~P~y~~aK~iIk~I~~~a~~in~d 548 (749)
+++.++++++.|...+|...-.+...+.++.+ . ++++ +++|.+.. + .+.+..+..
T Consensus 176 ~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~----------~~~~~~~~g~~~~--~-------~l~~~~~~~--- 231 (348)
T TIGR01133 176 REGKPTILVLGGSQGAKILNELVPKALAKLAE--K----------GIQIVHQTGKNDL--E-------KVKNVYQEL--- 231 (348)
T ss_pred CCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--c----------CcEEEEECCcchH--H-------HHHHHHhhC---
Confidence 35677888888887777754214444444322 1 2344 45554422 1 233333221
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCC-cchhhHhhcCceeeeecC
Q 004485 549 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 549 ~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasG-Ts~Mka~~NG~l~istlD 608 (749)
...+ +|.|. +. ++ +.++++||+++.+ || ++-+-||..|.+.|+|..
T Consensus 232 -~l~~--~v~~~--~~-~~-~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 232 -GIEA--IVTFI--DE-NM-AAAYAAADLVISR-------AGASTVAELAAAGVPAILIPY 278 (348)
T ss_pred -CceE--EecCc--cc-CH-HHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeC
Confidence 1222 33444 32 22 5788999999963 34 456699999999998743
No 105
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=82.01 E-value=27 Score=37.57 Aligned_cols=101 Identities=12% Similarity=0.028 Sum_probs=56.2
Q ss_pred CCCCeeEeEccccccccccc-chhhhHHHHHHHHhhcCccccCCCCCeE-EEEEecCCcCCHHHHHHHHHHHHHHhhhcC
Q 004485 470 DPNSLFDIQVKRIHEYKRQL-LNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDVGEVVNT 547 (749)
Q Consensus 470 d~~~~~~~~v~R~~eyKR~~-Lnil~~i~~l~~i~~~~~~~~~~~~p~q-~If~GKa~P~y~~aK~iIk~I~~~a~~in~ 547 (749)
+++..++..+.|...+|+.+ + +...+..+. + .+.+ +++.|.+. .+. +.+..+.
T Consensus 178 ~~~~~~i~~~~g~~~~~~~~~~-l~~a~~~l~---~---------~~~~~~~i~G~g~--~~~-------l~~~~~~--- 232 (350)
T cd03785 178 RPGKPTLLVFGGSQGARAINEA-VPEALAELL---R---------KRLQVIHQTGKGD--LEE-------VKKAYEE--- 232 (350)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHhh---c---------cCeEEEEEcCCcc--HHH-------HHHHHhc---
Confidence 45667777777766676543 4 334444332 1 1344 45667761 121 2222221
Q ss_pred CcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC
Q 004485 548 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 548 d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD 608 (749)
..+ +|.|.. |- +-...++++||+++.+| | |++-+-||..|.+.|++-.
T Consensus 233 ---~~~--~v~~~g-~~-~~~~~~l~~ad~~v~~s--g----~~t~~Eam~~G~Pvv~~~~ 280 (350)
T cd03785 233 ---LGV--NYEVFP-FI-DDMAAAYAAADLVISRA--G----ASTVAELAALGLPAILIPL 280 (350)
T ss_pred ---cCC--CeEEee-hh-hhHHHHHHhcCEEEECC--C----HhHHHHHHHhCCCEEEeec
Confidence 123 455544 43 33446778999999543 1 3556799999999998744
No 106
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=80.03 E-value=4.6 Score=35.29 Aligned_cols=33 Identities=3% Similarity=0.021 Sum_probs=25.7
Q ss_pred HHhhCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 004485 705 QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 737 (749)
Q Consensus 705 ~~Y~d~~~W~~~~~~~ma~~-g~FS~drsi~eY~ 737 (749)
.+.+|++.+.++..++-... ..|+|+..++++.
T Consensus 58 ~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 58 YLLENPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 33468999999988886654 3899999998865
No 107
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=80.02 E-value=2.1 Score=40.42 Aligned_cols=40 Identities=28% Similarity=0.380 Sum_probs=25.0
Q ss_pred hhccccchhhhhHhHHHHHhhhhcChhhhcCCCccccccCCCcccc
Q 004485 357 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRW 402 (749)
Q Consensus 357 i~~S~~VNgVS~~h~ei~~~~~f~~~~~l~p~k~~~ItNGI~~~~W 402 (749)
...++.+-.||+--++.+.+ ++ +-++++.=|.||||..+.
T Consensus 137 ~~~~~~ii~vS~~~~~~l~~--~~----~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 137 YKKADRIIAVSESTKDELIK--FG----IPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HCCSSEEEESSHHHHHHHHH--HT------SS-EEE----B-CCCH
T ss_pred HhcCCEEEEECHHHHHHHHH--hC----CcccCCEEEECCccHHHc
Confidence 56789999999988877764 32 346889999999998764
No 108
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=78.36 E-value=10 Score=41.17 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=61.8
Q ss_pred HhCCCCCCCCeeEeEcccccc---cccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 004485 464 VTGVTIDPNSLFDIQVKRIHE---YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 540 (749)
Q Consensus 464 ~~g~~~d~~~~~~~~v~R~~e---yKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~ 540 (749)
..|++ +...+.++..|... .|+.+. ++..+.++. . ..+++|+.| ++.... .+.+
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l~---~---------~~~~vi~~~--~~~~~~------~l~~ 248 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEE-ILEALAELA---E---------EDVPVVFPN--HPRTRP------RIRE 248 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHH-HHHHHHHHH---h---------cCCEEEEEC--CCChHH------HHHH
Confidence 44543 44566777888765 688877 777766542 1 025666544 443322 1233
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC
Q 004485 541 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 541 ~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD 608 (749)
..+.... ..+ +|.|+.--...--..++++||+++.+|- |+ +.-||..|.+.|.+-+
T Consensus 249 ~~~~~~~---~~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~~ 304 (363)
T cd03786 249 AGLEFLG---HHP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLRD 304 (363)
T ss_pred HHHhhcc---CCC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeCC
Confidence 2222110 023 5666632122234456889999997762 44 6777888898887643
No 109
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=77.62 E-value=7.8 Score=42.57 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=63.5
Q ss_pred HHhCCCCCCCCeeE-eE-cccccccccc-cchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 004485 463 RVTGVTIDPNSLFD-IQ-VKRIHEYKRQ-LLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 539 (749)
Q Consensus 463 ~~~g~~~d~~~~~~-~~-v~R~~eyKR~-~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~ 539 (749)
+++|++ ++.+++ ++ -+|..+.|+. .. ++..+..+.+ . . .+++++++|- +|.+.. .+.
T Consensus 178 ~~l~~~--~~~~~il~~~gsr~~~~~~~~~~-l~~a~~~l~~--~-~-------~~~~~ii~~~-~~~~~~------~~~ 237 (380)
T PRK00025 178 ARLGLD--PDARVLALLPGSRGQEIKRLLPP-FLKAAQLLQQ--R-Y-------PDLRFVLPLV-NPKRRE------QIE 237 (380)
T ss_pred HHcCCC--CCCCEEEEECCCCHHHHHHHHHH-HHHHHHHHHH--h-C-------CCeEEEEecC-ChhhHH------HHH
Confidence 356654 444432 33 3688887764 34 6666666543 1 1 1478888764 344332 122
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecC
Q 004485 540 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 608 (749)
Q Consensus 540 ~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlD 608 (749)
+..+. .. .+++.+..+ ++ ..++++||+++.+ ||++.+-||..|.+.|.+..
T Consensus 238 ~~~~~------~~-~~~v~~~~~---~~-~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 238 EALAE------YA-GLEVTLLDG---QK-REAMAAADAALAA-------SGTVTLELALLKVPMVVGYK 288 (380)
T ss_pred HHHhh------cC-CCCeEEEcc---cH-HHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEEc
Confidence 22221 10 113444432 23 5678999999974 59999999999999987743
No 110
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=74.37 E-value=11 Score=42.22 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=67.9
Q ss_pred HHhCCCCCCCCeeEeEc--ccccc-cccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 004485 463 RVTGVTIDPNSLFDIQV--KRIHE-YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 539 (749)
Q Consensus 463 ~~~g~~~d~~~~~~~~v--~R~~e-yKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~ 539 (749)
+++|++ ++.+++... +|.++ -|.... ++..+.++.+ . . ...++++.+-..+.... +.
T Consensus 183 ~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~--~-~-------p~~~~vi~~~~~~~~~~-------~~ 242 (385)
T TIGR00215 183 EKLGID--HNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQ--Q-E-------PDLRRVLPVVNFKRRLQ-------FE 242 (385)
T ss_pred HHcCCC--CCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCchhHHH-------HH
Confidence 356654 455555443 79998 455555 6666666643 2 1 14677665543332221 22
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhH
Q 004485 540 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV 612 (749)
Q Consensus 540 ~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~v 612 (749)
++.+... ... +|.++.+ ++ +.++++||+++-+| ||+-+-+|..|.+.|.+.---++
T Consensus 243 ~~~~~~~----~~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl 298 (385)
T TIGR00215 243 QIKAEYG----PDL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPL 298 (385)
T ss_pred HHHHHhC----CCC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHH
Confidence 2232211 122 6666654 33 35889999999766 89999999999999987655454
No 111
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=71.84 E-value=27 Score=40.33 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=56.3
Q ss_pred CeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchh
Q 004485 515 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 594 (749)
Q Consensus 515 p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~M 594 (749)
.++|=| |-+.+- . ..+.++ +. ++ .|+..++|.......++.-||++|.+|. .|.=|.+-|
T Consensus 306 d~~f~I-ga~te~--s-----~kL~~L-~~------y~---nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~ 365 (438)
T TIGR02919 306 DYHFHI-AALTEM--S-----SKLMSL-DK------YD---NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVR 365 (438)
T ss_pred CcEEEE-EecCcc--c-----HHHHHH-Hh------cC---CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHH
Confidence 588877 433331 1 145666 32 43 6999999999777799999999999999 999999999
Q ss_pred hHhhcCceeeee
Q 004485 595 KFSLNGCLIIGT 606 (749)
Q Consensus 595 ka~~NG~l~ist 606 (749)
.|+-+|-+.+|-
T Consensus 366 eA~~~G~pI~af 377 (438)
T TIGR02919 366 RAFEYNLLILGF 377 (438)
T ss_pred HHHHcCCcEEEE
Confidence 999999988843
No 112
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=66.15 E-value=1.2e+02 Score=34.37 Aligned_cols=97 Identities=20% Similarity=0.232 Sum_probs=72.1
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcc
Q 004485 513 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS 592 (749)
Q Consensus 513 ~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs 592 (749)
..|+-++++|+---...+ +-.|.+.++|++++ +++ +|.|.-|---+.-..++.-|-+-++.=- -|-=|.|
T Consensus 303 ~~~iKL~ivGScRneeD~--ervk~Lkd~a~~L~----i~~--~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIs 372 (465)
T KOG1387|consen 303 VSPIKLIIVGSCRNEEDE--ERVKSLKDLAEELK----IPK--HVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGIS 372 (465)
T ss_pred cCCceEEEEeccCChhhH--HHHHHHHHHHHhcC----Ccc--ceEEEecCCHHHHHHHhccceeehhhhh--hhhcchh
Confidence 458899999976433322 34678889999876 888 8999988666666666677777777666 7899999
Q ss_pred hhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccchhh
Q 004485 593 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKL 636 (749)
Q Consensus 593 ~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~ 636 (749)
=.-+|.-|.+|| +.+-|| ++-|-|.++
T Consensus 373 VVEyMAAGlIpi----------~h~SgG-------P~lDIV~~~ 399 (465)
T KOG1387|consen 373 VVEYMAAGLIPI----------VHNSGG-------PLLDIVTPW 399 (465)
T ss_pred HHHHHhcCceEE----------EeCCCC-------Cceeeeecc
Confidence 999999999999 444444 577877754
No 113
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=53.55 E-value=18 Score=33.54 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=24.2
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhcc-ceEEEeecCC
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT-RTVAYTNHTV 289 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~-~~~vfT~HT~ 289 (749)
.+||+||+|...|.....-+++.+ .+ ..+++|.|..
T Consensus 73 ~~~DvIh~h~~~~~~~~~~l~~~~--------------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 73 EKPDVIHCHTPSPYGLFAMLAKKL--------------LKNKKVIYTVHGS 109 (139)
T ss_pred CCCCEEEEecCChHHHHHHHHHHH--------------cCCCCEEEEecCC
Confidence 469999999999843223344322 33 5789999964
No 114
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=43.12 E-value=45 Score=32.36 Aligned_cols=46 Identities=17% Similarity=0.047 Sum_probs=33.4
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCchhhhhhccH
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 299 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~qG~e~f~~ 299 (749)
.+||+||+|++.++...+ .+.. ...+..+++|.|++.+.-...+..
T Consensus 50 ~~~D~i~~~~~~~~~~~~-~~~~-------------~~~~~~~i~~~h~~~~~~~~~~~~ 95 (229)
T cd01635 50 FKPDVVHAHGYYPAPLAL-LLAA-------------RLLGIPLVLTVHGVNRSLLEGVPL 95 (229)
T ss_pred cCCCEEEEcCCCcHHHHH-HHHH-------------hhCCCCEEEEEcCccHhhcccCcH
Confidence 479999999999998753 1111 124577999999999987755543
No 115
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=35.99 E-value=5.6e+02 Score=30.03 Aligned_cols=137 Identities=16% Similarity=0.199 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHH
Q 004485 454 KKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKR 533 (749)
Q Consensus 454 K~~L~~~i~~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~ 533 (749)
++.+++++.+++++..... .|..|+....+.+...- -..|+++-+-||=.+--..--.
T Consensus 259 ~q~~~e~l~~~L~L~~~~~-------------~~~~l~~W~~~~~~~d~---------~~~~V~IalVGKYt~l~DsY~S 316 (585)
T KOG2387|consen 259 EQGIVEYLNRRLGLSIISS-------------ERPMLDKWSNMAERYDD---------LQVPVRIALVGKYTKLSDSYLS 316 (585)
T ss_pred hhhHHHHHHHHhCCCcccc-------------chhhHHHHHHHHHhhhc---------ccCcEEEEEEeccccchHHHHH
Confidence 4557788888888764321 22445444444333220 1248999999998887777778
Q ss_pred HHHHHHHHHhhhcCCcCCCCcceEEEEcCCCH------------HHHHhhccCcccccccCCCCccCCCcchhhHh----
Q 004485 534 IVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNV------------SVAELLIPGSELSQHISTAGMEASGTSNMKFS---- 597 (749)
Q Consensus 534 iIk~I~~~a~~in~d~~~~~~lkvvF~~nYn~------------~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~---- 597 (749)
++|.+..-|-. ++.++.+.+++.=+. .-|=.++.+||=.|-|-- |-.-|+++|..+
T Consensus 317 v~KAL~Ha~~~------~~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGG--FG~RGveG~i~Aak~A 388 (585)
T KOG2387|consen 317 VVKALEHAALA------INRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGG--FGDRGVEGKILAAKWA 388 (585)
T ss_pred HHHHHHHHHHH------hcccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCc--ccccchhHHHHHHHHH
Confidence 88888877765 556788999876443 345677888999999877 999999999765
Q ss_pred -hcCceeeeecCc---hhHHHHHHhcC
Q 004485 598 -LNGCLIIGTLDG---ANVEIRQEIGE 620 (749)
Q Consensus 598 -~NG~l~istlDG---~~vE~~~~~Gg 620 (749)
-|+.+-+|+.=| |.||++|.+=|
T Consensus 389 Ren~iP~LGiCLGmQ~AvIEfaRnvLg 415 (585)
T KOG2387|consen 389 RENKIPFLGICLGMQLAVIEFARNVLG 415 (585)
T ss_pred HhcCCCeEeeehhhhHHHHHHHHHhhC
Confidence 389988988777 57899998855
No 116
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=28.62 E-value=1e+03 Score=28.01 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=50.3
Q ss_pred HHhCCCCCCCCeeEeEcccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHH
Q 004485 463 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 542 (749)
Q Consensus 463 ~~~g~~~d~~~~~~~~v~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a 542 (749)
+++|++ .+.++.+-.-++...-. - .+....++++ . -| .-.+++.. .|.... ..+-+.+.+..
T Consensus 277 ~~~gLp--~d~vvF~~fn~~~KI~p--~-~l~~W~~IL~--~-vP-------~S~L~L~~--~~~~~~-~~l~~~~~~~G 338 (468)
T PF13844_consen 277 AQYGLP--EDAVVFGSFNNLFKISP--E-TLDLWARILK--A-VP-------NSRLWLLR--FPASGE-ARLRRRFAAHG 338 (468)
T ss_dssp GGGT----SSSEEEEE-S-GGG--H--H-HHHHHHHHHH--H-ST-------TEEEEEEE--TSTTHH-HHHHHHHHHTT
T ss_pred HHcCCC--CCceEEEecCccccCCH--H-HHHHHHHHHH--h-CC-------CcEEEEee--CCHHHH-HHHHHHHHHcC
Confidence 356665 56677776666544333 3 4455555543 2 22 23444443 233222 22222222211
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHH-hhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCc
Q 004485 543 EVVNTDPEVNSYLKVVFVPNYNVSVAE-LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 609 (749)
Q Consensus 543 ~~in~d~~~~~~lkvvF~~nYn~~lA~-~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG 609 (749)
.-++ ||+|.+-=.- -.| ..+.-+||.|-++- + ..||..|-|+--|+ |+.|+-|
T Consensus 339 -------v~~~--Ri~f~~~~~~-~ehl~~~~~~DI~LDT~p--~-nG~TTt~dALwmGV-PvVTl~G 392 (468)
T PF13844_consen 339 -------VDPD--RIIFSPVAPR-EEHLRRYQLADICLDTFP--Y-NGGTTTLDALWMGV-PVVTLPG 392 (468)
T ss_dssp -------S-GG--GEEEEE---H-HHHHHHGGG-SEEE--SS--S---SHHHHHHHHHT---EEB---
T ss_pred -------CChh--hEEEcCCCCH-HHHHHHhhhCCEEeeCCC--C-CCcHHHHHHHHcCC-CEEeccC
Confidence 1235 7888763221 112 25788999999854 4 45788999888887 5546433
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=26.86 E-value=5.9e+02 Score=28.41 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=44.5
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHHHHHHhcCccEEeecCccccc
Q 004485 556 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQV 633 (749)
Q Consensus 556 kvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v 633 (749)
+|.+++..+-.---.++..||+.+-.|. .+.--|+.-|.+.|+. |.+.|+++. |.|....|...+++
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS-------ggi~EA~~lg~Pvv~l--~~R~e~~~~--g~nvl~vg~~~~~I 329 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS-------SGIIEAPSFGVPTINI--GTRQKGRLR--ADSVIDVDPDKEEI 329 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh-------hHHHhhhhcCCCEEee--cCCchhhhh--cCeEEEeCCCHHHH
Confidence 5899987777777778899999885543 2225678889988866 347676654 34554445444443
No 118
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=26.23 E-value=1e+02 Score=33.72 Aligned_cols=69 Identities=9% Similarity=0.032 Sum_probs=43.4
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhh-----------HhhcCceeeeecCchhHHHHHHhcCccEE
Q 004485 556 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK-----------FSLNGCLIIGTLDGANVEIRQEIGEENFF 624 (749)
Q Consensus 556 kvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mk-----------a~~NG~l~istlDG~~vE~~~~~Gg~n~~ 624 (749)
+|.|+.-..-+--..++++ |+.+-.... ...|+-+.+ +|..|.+.|++-+|+..|++++ +.+||
T Consensus 208 ~V~f~G~~~~eel~~~l~~-~~gLv~~~~--~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~--~~~G~ 282 (333)
T PRK09814 208 NISYKGWFDPEELPNELSK-GFGLVWDGD--TNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE--NGLGF 282 (333)
T ss_pred CeEEecCCCHHHHHHHHhc-CcCeEEcCC--CCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh--CCceE
Confidence 6888766544443444444 655532221 111222222 4999999999999999999988 47899
Q ss_pred eecCc
Q 004485 625 LFGAV 629 (749)
Q Consensus 625 ~fG~~ 629 (749)
++...
T Consensus 283 ~v~~~ 287 (333)
T PRK09814 283 VVDSL 287 (333)
T ss_pred EeCCH
Confidence 98743
No 119
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=25.94 E-value=1.9e+02 Score=32.87 Aligned_cols=111 Identities=18% Similarity=0.193 Sum_probs=70.8
Q ss_pred CCCCCeeEeEc--ccccccccccchhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhc
Q 004485 469 IDPNSLFDIQV--KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 546 (749)
Q Consensus 469 ~d~~~~~~~~v--~R~~eyKR~~Lnil~~i~~l~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in 546 (749)
++++.++++.. +|-.|=||..--++..+.++.+ . . ..++|++.. +.+.+.. .+.++.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~-~-------p~l~fvvp~-a~~~~~~------~i~~~~~~-- 240 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--Q-R-------PDLQFVVPV-APEVHEE------LIEEILAE-- 240 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--h-C-------CCeEEEEec-CCHHHHH------HHHHHHHh--
Confidence 56777888777 9999999885325666666654 2 1 257888774 3332222 23333322
Q ss_pred CCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhhHhhcCceeeeecCchhHH
Q 004485 547 TDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 613 (749)
Q Consensus 547 ~d~~~~~~lkvvF~~nYn~~lA~~i~~gaDv~l~~S~~~~EasGTs~Mka~~NG~l~istlDG~~vE 613 (749)
....+.+.++++- .+.++.+||+-+ =+|||..+-+++.|++.|.+.---++.
T Consensus 241 ----~~~~~~~~~~~~~----~~~~m~~ad~al-------~~SGTaTLE~Al~g~P~Vv~Yk~~~lt 292 (373)
T PF02684_consen 241 ----YPPDVSIVIIEGE----SYDAMAAADAAL-------AASGTATLEAALLGVPMVVAYKVSPLT 292 (373)
T ss_pred ----hCCCCeEEEcCCc----hHHHHHhCcchh-------hcCCHHHHHHHHhCCCEEEEEcCcHHH
Confidence 1122356666542 445677888765 479999999999999999886655543
No 120
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=21.65 E-value=1.9e+02 Score=31.41 Aligned_cols=37 Identities=8% Similarity=-0.123 Sum_probs=24.1
Q ss_pred CCCcEEEeCCCChhchHHHHHHHHHHhcCCChHHHhhhccceEEEeecCCch
Q 004485 240 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLP 291 (749)
Q Consensus 240 ~~~~viHlND~H~al~ipellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~ 291 (749)
.+||++|++.+.+++.. .+... ..+.+++++.|...+
T Consensus 90 ~~pDvv~~~~~~~~~~~-~~~~~--------------~~~~p~v~~~~~~~~ 126 (357)
T PRK00726 90 FKPDVVVGFGGYVSGPG-GLAAR--------------LLGIPLVIHEQNAVP 126 (357)
T ss_pred cCCCEEEECCCcchhHH-HHHHH--------------HcCCCEEEEcCCCCc
Confidence 36999999999987653 22221 134567888776433
No 121
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=20.47 E-value=86 Score=34.31 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=14.8
Q ss_pred EcCCCHHHHHhhccCcccc
Q 004485 560 VPNYNVSVAELLIPGSELS 578 (749)
Q Consensus 560 ~~nYn~~lA~~i~~gaDv~ 578 (749)
.|++++.+.+-+..|.=+.
T Consensus 283 ~Eg~g~~~lEA~a~G~Pvv 301 (372)
T cd03792 283 REGFGLTVTEALWKGKPVI 301 (372)
T ss_pred ccCCCHHHHHHHHcCCCEE
Confidence 4778889999988886553
Done!