Query 004486
Match_columns 749
No_of_seqs 330 out of 2238
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 18:14:58 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004486.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1793-1796//hhsearch_pdb/004486hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y4s_A Chaperone protein HTPG; 1.0 1 1 189.7 20.4 313 229-617 6-358 (559)
2 3peh_A Endoplasmin homolog; st 1.0 1 1 189.3 9.7 172 229-411 25-228 (281)
3 3nmq_A Heat shock protein HSP 1.0 1 1 187.1 8.0 172 228-410 17-218 (239)
4 2ioq_A Chaperone protein HTPG; 1.0 1 1 186.6 15.6 172 230-410 7-209 (624)
5 3ied_A Heat shock protein; HSP 1.0 1 1 184.6 9.0 183 216-410 13-268 (272)
6 2o1u_A Endoplasmin; GRP94, HSP 1.0 1 1 183.0 7.5 169 230-410 25-229 (666)
7 2cg9_A ATP-dependent molecular 1.0 1 1 182.9 13.7 172 229-411 5-207 (677)
8 1qy5_A Endoplasmin; GRP94, NEC 1.0 1 1 180.4 7.1 168 231-410 9-212 (269)
9 3t0h_A Heat shock protein HSP 1.0 1 1 175.9 7.7 176 224-410 6-211 (228)
10 3o0i_A HSP90AA1 protein; HSP90 1.0 1 1 174.5 7.6 173 227-410 37-239 (256)
No 1
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=189.72 Aligned_cols=313 Identities=20% Similarity=0.236 Sum_probs=183.5
Q ss_pred CEEEECCHH-HHHHHHCCCCCCHHHHHHHHHHCCCCCC----------------CCCCEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 514536988-9997300122799999999986360249----------------99519999960002589985689999
Q 004486 229 KNFVRADPS-YLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSII 291 (749)
Q Consensus 229 ~~~~~v~~~-~L~slst~h~~~pf~AIaELIDNA~DA~----------------At~I~I~i~~~~~~~~~~~~~~L~I~ 291 (749)
...|++..+ .|+.++.+.|+.+..+|+|||+||+||+ +..+.|.|.. ..+...|+|.
T Consensus 6 ~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~------d~~~~~I~I~ 79 (559)
T 1y4s_A 6 TRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSF------DKDKRTLTIS 79 (559)
T ss_dssp EEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEE------ETTTTEEEEE
T ss_pred CEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEE------ECCCCEEEEE
T ss_conf 3210303999999998743798489999999879987576777642681112678764799999------6898589999
Q ss_pred ECCCCCCHHHHHHHH-HCCCCCCC----------CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC-CCEEEEEEEEC
Q ss_conf 399889977698652-20468999----------8999654433530110011126818999852799-85059987704
Q 004486 292 DDGHGMTHQDVVRMT-YFGHKQPD----------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADS-RSIAFLSQSLN 359 (749)
Q Consensus 292 DNG~GMs~eel~~~l-~fG~S~k~----------~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~-~s~~~ls~sf~ 359 (749)
|||+||+++++.+.+ .++.|.+. ..+...||+||+||+|+++ +|++++|.|++.+. ...++.|.+
T Consensus 80 DnGiGMt~edl~~~l~tiA~Sg~~~f~e~l~~~~~~~~~~iG~fGvGfyS~f~-VadkV~V~Sr~~~~~~~~~~~w~s-- 156 (559)
T 1y4s_A 80 DNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFI-VADKVTVRTRAAGEKPENGVFWES-- 156 (559)
T ss_dssp ECSSCCCHHHHHHHHSCCSCCCCCCTTCC--------CCCCSSCCCSGGGHHH-HEEEEEEEEECSSSCGGGEEEEEE--
T ss_pred ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH-CCCEEEEEECCCCCCCCEEEEEEE--
T ss_conf 89988899999999765515562778987411111354434888763565641-457689997579988872489999--
Q ss_pred CCCEEEEEECCCCCCCCCEEEEEECCCC-CCHHHHHHHH-HHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCE
Q ss_conf 9970189705224799938999725640-0002554776-7430998502477752003468888199998126879950
Q 004486 360 QGKDNLEIPIVSYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNY 437 (749)
Q Consensus 360 ~g~~~i~VPi~~~~~~Gt~i~l~~~~~~-e~~~~~~L~~-I~kySPF~s~~I~e~~~~~~~~~~GT~IiI~nLrr~~~~~ 437 (749)
.+...+.+....-...||.|+++++.+. ++...+.++. |.+||.|..+||.-.. .+.+.|....-|.+- +..
T Consensus 157 ~g~~~~~i~~~~~~~~GT~I~L~Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~~---~e~~~~~~~~~~~~i---n~~ 230 (559)
T 1y4s_A 157 AGEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEK---REEKDGETVISWEKI---NKA 230 (559)
T ss_dssp CSSSEEEEEEECCCSCEEEEEEEECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEEE---EECSTTSCEEEEEEC---CCC
T ss_pred ECCCEEEEEECCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE---CCCCCCCCCCCEEEE---ECC
T ss_conf 37973588677778998399999765554235099999999997345787538961---145566543322897---578
Q ss_pred EEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH---CCCCEEEEECCEEECCCCCCCCCCCE
Q ss_conf 343048999999877675022012234788864566762001998886550---38984999917361330000013760
Q 004486 438 CLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIF---LVPRMKIYVQGSLVRSRPLAKSLNKT 514 (749)
Q Consensus 438 eLdF~~d~~~~~~~~~~DI~i~~~~~~~~~~q~~~~~~~~ySLRaYLsiLY---L~PrmkI~LnG~kV~~~~i~~~L~~~ 514 (749)
..-|... +.++ . +.-..++..-++ -+|-+-|..+..-
T Consensus 231 ~~lw~~~--------~~~i------------------~-~e~y~~fy~~~~~d~~~~l~~ih~~~eg------------- 270 (559)
T 1y4s_A 231 QALWTRN--------KSEI------------------T-DEEYKEFYKHIAHDFNDPLTWSHNRVEG------------- 270 (559)
T ss_dssp CCGGGSC--------GGGC------------------C-HHHHHHHHHHHHTCSSCEEEEEEECCCS-------------
T ss_pred CCCEECC--------CCCC------------------C-HHHHHHHHHHHHHHHHCCEEEEEECCCC-------------
T ss_conf 3222258--------6403------------------0-9999999876413242483899832578-------------
Q ss_pred EEECCCCCCEEEEEEECCCCCC----C-CCCCCEEEEEECCEEEEE-EEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 2220620252799998311344----3-410120999990906422-440034335788884199999418632258985
Q 004486 515 CVETGIIMGKSAHLTLGRCQLE----W-EQMNCGIFLYWHGRLIEA-YKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGL 588 (749)
Q Consensus 515 ~v~~~~~~~~~V~It~G~~~~e----~-~r~~~Gi~IY~nnRLI~~-~~kVg~q~~~~~~grGVIGVve~~~l~~p~~~~ 588 (749)
. ..+.-.+.+.... + .....|+.+|.|+|+|.- ...+-|. .-+=|-|||+.+.+ +
T Consensus 271 -----~---~~~~gll~~P~~~p~~~~~r~~~~~i~lyvn~v~I~d~~~~llP~-----~l~fv~gvVDs~dl-p----- 331 (559)
T 1y4s_A 271 -----K---QEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPN-----YLRFVRGLIDSSDL-P----- 331 (559)
T ss_dssp -----S---SCEEEEEEEESSCCTTCSSSSCCCCEEEEETTEEEEEEEGGGSCG-----GGTTCEEEEEESSS-C-----
T ss_pred -----C---EEEEEEEECCCCCCCHHHHHCCCCCEEEEECCEEEECCHHHHCHH-----HHHHEEEEECHHHC-C-----
T ss_conf -----5---699999990786761022021368769999587933612304747-----57254674076227-9-----
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 00136765766754799999999998999
Q 004486 589 VWVHNNKQGFLDCEPYARLEEWLGKVADE 617 (749)
Q Consensus 589 ~~pthnKQdFe~t~~y~~L~~~L~e~l~e 617 (749)
++-+..-+.....++.+.+++.+++.+
T Consensus 332 --lNVSRE~lq~~~~l~~I~~~l~kkv~~ 358 (559)
T 1y4s_A 332 --LNVSREILQDSTVTRNLRNALTKRVLQ 358 (559)
T ss_dssp --TTCCTTGGGGCHHHHHHHHHHHHHHHH
T ss_pred --CEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --721753442338999999999999999
No 2
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=1.00 E-value=1 Score=189.29 Aligned_cols=172 Identities=23% Similarity=0.329 Sum_probs=129.8
Q ss_pred CEEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCC----------------CCCEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 51453698-899973001227999999999863602499----------------9519999960002589985689999
Q 004486 229 KNFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSII 291 (749)
Q Consensus 229 ~~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~A----------------t~I~I~i~~~~~~~~~~~~~~L~I~ 291 (749)
...|++.- +.|..++.+.|+.+..+|+|||+||+||.+ ..+.|.|.. ..+...|.|.
T Consensus 25 ~~~Fqaei~~Ll~ll~~~lYsn~~ifLRELIsNA~DA~~k~r~~~l~d~~~~~~~~~l~I~I~~------d~~~~tLtI~ 98 (281)
T 3peh_A 25 SHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISA------NKEKNILSIT 98 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEE------ETTTTEEEEE
T ss_pred EEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEE------CCCCCEEEEE
T ss_conf 4654388999999998861488099999998686879999998852780211688844999998------2897679999
Q ss_pred ECCCCCCHHHHHHHH-HCCCCCCC---------CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCC
Q ss_conf 399889977698652-20468999---------89996544335301100111268189998527998505998770499
Q 004486 292 DDGHGMTHQDVVRMT-YFGHKQPD---------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQG 361 (749)
Q Consensus 292 DNG~GMs~eel~~~l-~fG~S~k~---------~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~~g 361 (749)
|||+||+++++.+.+ .++.|.+. ..+...||+||+||+|++| +|+++.|.|++.+. .++.|.+..
T Consensus 99 DNGiGMt~edL~~~LgtIa~Sgtk~f~e~l~~~~~d~~~IGqFGVGFySaf~-vadkV~V~Sk~~~~--~~~~Wes~g-- 173 (281)
T 3peh_A 99 DTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSAFL-VADKVIVYTKNNDD--EQYIWESTA-- 173 (281)
T ss_dssp ECSCCCCHHHHHHHHHHHHHSCHHHHHHHHHHTTCCSTTTTTTTCGGGGGGG-TEEEEEEEEECTTS--CCEEEEEET--
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC-CCCEEEEEEECCCC--CEEEEEECC--
T ss_conf 4898989999999999987676563777642024551200455732010000-16879999940788--779999889--
Q ss_pred CEEEEEECC---CCCCCCCEEEEEECCCC-CCHHHHHHHH-HHHHCCCCHHHHHH
Q ss_conf 701897052---24799938999725640-0002554776-74309985024777
Q 004486 362 KDNLEIPIV---SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE 411 (749)
Q Consensus 362 ~~~i~VPi~---~~~~~Gt~i~l~~~~~~-e~~~~~~L~~-I~kySPF~s~~I~e 411 (749)
...+.|... .-..+||.|+++++++. ++...+.++. |.+||.|..+||..
T Consensus 174 ~g~fti~~~~~~~~~~~GT~I~L~Lked~~e~le~~~ik~ivkkys~fi~~pI~l 228 (281)
T 3peh_A 174 DAKFTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKLMDLISKYSQFIQFPIYL 228 (281)
T ss_dssp TSCEEEEECTTCSTTSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCCSCEEE
T ss_pred CCCEEEEECCCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9518988767777789980899998886266517999999999861347866498
No 3
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=1.00 E-value=1 Score=187.13 Aligned_cols=172 Identities=22% Similarity=0.292 Sum_probs=130.0
Q ss_pred CCEEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC----------------CCEEEEEECCCCCCCCCCCEEEE
Q ss_conf 851453698-8999730012279999999998636024999----------------51999996000258998568999
Q 004486 228 EKNFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKAT----------------KLEISIESIYFKKAGKDIPMLSI 290 (749)
Q Consensus 228 ~~~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~At----------------~I~I~i~~~~~~~~~~~~~~L~I 290 (749)
....|++.- +.|..++.+.|+.+..+|+|||+||.||.+. .+.|.|.. ..+...|.|
T Consensus 17 e~~~Fqae~~~ll~ll~~~lYs~~~ifLRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~------d~~~~~L~I 90 (239)
T 3nmq_A 17 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIP------NPQERTLTL 90 (239)
T ss_dssp EEEECCHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEEE
T ss_pred EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEE------ECCCCEEEE
T ss_conf 14762166999999998864698099999998686879998888750680111689856999998------189657999
Q ss_pred EECCCCCCHHHHHHHH-HCCCCCC--------CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCC
Q ss_conf 9399889977698652-2046899--------989996544335301100111268189998527998505998770499
Q 004486 291 IDDGHGMTHQDVVRMT-YFGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQG 361 (749)
Q Consensus 291 ~DNG~GMs~eel~~~l-~fG~S~k--------~~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~~g 361 (749)
.|||+||+++++.+.+ .++.|.+ ...+...||+||+||++++| +|+++.|.|++.+. .++.|.+. +
T Consensus 91 ~DnGiGMt~edL~~~LgtIA~Sgtk~f~e~~~~~~d~~~IGqFGvGfySaf~-vadkv~V~Sk~~~~--~~~~W~s~--~ 165 (239)
T 3nmq_A 91 VDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVVVITKHNDD--EQYAWESS--A 165 (239)
T ss_dssp EECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTS--CCEEEEEC--S
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCEEEEEEEECCC--CEEEEEEC--C
T ss_conf 9699897999999999888225324245552036774434666754020126-58878999940788--42689977--9
Q ss_pred CEEEEEECCC--CCCCCCEEEEEECCCC-CCHHHHHHHH-HHHHCCCCHHHHH
Q ss_conf 7018970522--4799938999725640-0002554776-7430998502477
Q 004486 362 KDNLEIPIVS--YYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 410 (749)
Q Consensus 362 ~~~i~VPi~~--~~~~Gt~i~l~~~~~~-e~~~~~~L~~-I~kySPF~s~~I~ 410 (749)
...+.|.... -..+||.|+++++++. ++..++.++. |.+||.|..+||.
T Consensus 166 ~g~fti~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~~lv~kys~fi~~pI~ 218 (239)
T 3nmq_A 166 GGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPIT 218 (239)
T ss_dssp TTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEE
T ss_pred CCCEEEEECCCCCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 97679996688867899889999888857863878999999998752698638
No 4
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=186.62 Aligned_cols=172 Identities=22% Similarity=0.298 Sum_probs=127.7
Q ss_pred EEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCC----------------CCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 1453698-89997300122799999999986360249----------------995199999600025899856899993
Q 004486 230 NFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSIID 292 (749)
Q Consensus 230 ~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~----------------At~I~I~i~~~~~~~~~~~~~~L~I~D 292 (749)
..|++.. +.|+.++.+.|+.+..+|+|||+||+||+ +..+.|.|.. ..+...|+|.|
T Consensus 7 ~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~------d~~~~~I~I~D 80 (624)
T 2ioq_A 7 RGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSF------DKDKRTLTISD 80 (624)
T ss_dssp --------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEE------ETTTTEEEEEE
T ss_pred EEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE------ECCCCEEEEEE
T ss_conf 320413999999998733798579999999979986565677642681003678874799999------68974899998
Q ss_pred CCCCCCHHHHHHHH-HCCCCCCC----------CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC-CCEEEEEEEECC
Q ss_conf 99889977698652-20468999----------8999654433530110011126818999852799-850599877049
Q 004486 293 DGHGMTHQDVVRMT-YFGHKQPD----------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADS-RSIAFLSQSLNQ 360 (749)
Q Consensus 293 NG~GMs~eel~~~l-~fG~S~k~----------~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~-~s~~~ls~sf~~ 360 (749)
||+||+++++.+.+ .++.|.+. ..+...||+||+||+|+++ ++++++|.|++.+. ...++.|.+.
T Consensus 81 nGiGMt~edl~~~l~tiA~Sg~~~f~~~l~~~~~~~~~~iG~fGvGfyS~f~-VadkV~V~Sr~~~~~~~~~~~w~s~-- 157 (624)
T 2ioq_A 81 NGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFI-VADKVTVRTRAAGEKPENGVFWESA-- 157 (624)
T ss_dssp CSCCCCHHHHHHHHHHHCC---------------CCTTHHHHHHHHHHHHHH-HEEEEEEEEECTTSCGGGEEEEEEC--
T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH-CCCEEEEEECCCCCCCCEEEEEEEE--
T ss_conf 9989899999999876605561778987301111354445888843798970-5786999977899888725999993--
Q ss_pred CCEEEEEECCCCCCCCCEEEEEECCCC-CCHHHHHHHH-HHHHCCCCHHHHH
Q ss_conf 970189705224799938999725640-0002554776-7430998502477
Q 004486 361 GKDNLEIPIVSYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 410 (749)
Q Consensus 361 g~~~i~VPi~~~~~~Gt~i~l~~~~~~-e~~~~~~L~~-I~kySPF~s~~I~ 410 (749)
+...+.+....-...||.|+++++.+. ++...+.++. |.+||.|..+||.
T Consensus 158 g~~~~~i~~~~~~~~GT~I~L~Lk~d~~Efl~~~~i~~ivkkys~fi~~PI~ 209 (624)
T 2ioq_A 158 GEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVE 209 (624)
T ss_dssp SSSCCEEEEECCSSSEEEEEEEECTTCGGGGCHHHHHHHHHHHHTTCSSCEE
T ss_pred CCCEEEEEECCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 8974789888888998499999756232115089999999997235787538
No 5
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=1.00 E-value=1 Score=184.63 Aligned_cols=183 Identities=25% Similarity=0.326 Sum_probs=133.5
Q ss_pred CCCCEEEECCCCCCEEEECCHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCCC----------------------------
Q ss_conf 998215413899851453698899973-001227999999999863602499----------------------------
Q 004486 216 PEPRAVKQAGPLEKNFVRADPSYLQTL-GQAHSGWIFGAIAELVDNSRDAKA---------------------------- 266 (749)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~~L~sl-st~h~~~pf~AIaELIDNA~DA~A---------------------------- 266 (749)
+.-.+..+.++.....|+..-+-|..+ ..+.|+....+|+|||+||.||..
T Consensus 13 ~~~~~~~~~~~~e~~~Fqae~~~ll~li~~slYs~keiFlRELISNasDA~dK~r~~l~~~~~~~~~~~~~~~~~~~~~~ 92 (272)
T 3ied_A 13 GRENLYFQGSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASDACDKKRIILENNKLIKDAEVVTNEEIKNETE 92 (272)
T ss_dssp -CCCCEETTEECEEEECCHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred CHHHHHCCCCCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCC
T ss_conf 12233205665520315888999999998614787899999998726889999998613825420100011110012211
Q ss_pred ------------------------CCCEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH-HCCCCCCC-------
Q ss_conf ------------------------9519999960002589985689999399889977698652-20468999-------
Q 004486 267 ------------------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT-YFGHKQPD------- 314 (749)
Q Consensus 267 ------------------------t~I~I~i~~~~~~~~~~~~~~L~I~DNG~GMs~eel~~~l-~fG~S~k~------- 314 (749)
..+.|.|.. +.+...|+|.|||+||+++++.+.+ .++.|.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~e~~~~~~~l~I~I~~------Dk~~~tLtI~DNGiGMTkeeL~~~LgtIA~SGtk~Fle~l~ 166 (272)
T 3ied_A 93 KEKTENVNESTDKKENVEEEKNDIKKLIIKIKP------DKEKKTLTITDNGIGMDKSELINNLGTIAQSGTAKFLKQIE 166 (272)
T ss_dssp ---------------------CGGGGCCEEEEE------ETTTTEEEEEECSCCCCHHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE------ECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 123333333432112321125788873799999------08998899983898889999999999886021255788742
Q ss_pred --CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEEECCC--------CCCCCCEEEEEEC
Q ss_conf --899965443353011001112681899985279985059987704997018970522--------4799938999725
Q 004486 315 --ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVS--------YYRKGQFMELDTV 384 (749)
Q Consensus 315 --~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~~i~VPi~~--------~~~~Gt~i~l~~~ 384 (749)
..+...|||||+||++|+| +|++++|.|| .+ ..++.|.+ .+...+.|.... ...+||.|+++++
T Consensus 167 ~~~~d~~~IGqFGVGFySaFm-VAdkV~V~Sk-~d--d~~~~WeS--~g~gsfti~~~~~~~~~~g~~~~~GT~I~L~Lk 240 (272)
T 3ied_A 167 EGKADSNLIGQFGVGFYSSFL-VSNRVEVYTK-KE--DQIYRWSS--DLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLK 240 (272)
T ss_dssp TTSSCTTCGGGSCCGGGGGGG-TEEEEEEEEE-SS--SCEEEEEE--CSSSEEEEEECTTCTTCC--CCSSEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCEEHEEEC-CCCEEEEEEC-CC--CCEEEEEE--CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 144553314765600010000-5888999986-79--92599998--799977999776544456777899958999988
Q ss_pred CCC-CCHHHHHHHH-HHHHCCCCHHHHH
Q ss_conf 640-0002554776-7430998502477
Q 004486 385 VQS-EATAKYNLKS-IKEFSPFNKYLIG 410 (749)
Q Consensus 385 ~~~-e~~~~~~L~~-I~kySPF~s~~I~ 410 (749)
++. ++..++.++. |.+||.|..+||.
T Consensus 241 ed~~e~le~~~ik~likkys~fi~~PI~ 268 (272)
T 3ied_A 241 EECDEYLEDYKLKELIKKYSEFIKFPIE 268 (272)
T ss_dssp GGGGGGGSHHHHHHHHHHHCTTCCSCEE
T ss_pred CCHHHHCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 8747853999999999999757798759
No 6
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=1.00 E-value=1 Score=183.02 Aligned_cols=169 Identities=20% Similarity=0.305 Sum_probs=124.2
Q ss_pred EEEECCHH-HHHHHHCCCCCCHHHHHHHHHHCCCCCC----------------CCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 14536988-9997300122799999999986360249----------------995199999600025899856899993
Q 004486 230 NFVRADPS-YLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSIID 292 (749)
Q Consensus 230 ~~~~v~~~-~L~slst~h~~~pf~AIaELIDNA~DA~----------------At~I~I~i~~~~~~~~~~~~~~L~I~D 292 (749)
..|++.-+ .|..++.+.|+.+..+|+|||+||+||+ |..+.|.|.. ..+...|+|.|
T Consensus 25 ~~Fqaei~~Ll~li~~sLYsn~eifLRELIsNA~DA~dk~r~~~l~~~~~~~~a~~~~I~I~~------d~~~~~I~I~D 98 (666)
T 2o1u_A 25 FAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTD 98 (666)
T ss_dssp ---------CCSSSTTTTSSSCTTHHHHHHHHHHHHHHHHHHHTTSCTTSSSSCCCCCEEEEE------ETTTTEEEEEE
T ss_pred EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEE------ECCCCEEEEEE
T ss_conf 425776999999988732698239899987569999998888742680211678763799999------38977899998
Q ss_pred CCCCCCHHHHHHHH-HCCCCCCC--------C-----CCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEE
Q ss_conf 99889977698652-20468999--------8-----9996544335301100111268189998527998505998770
Q 004486 293 DGHGMTHQDVVRMT-YFGHKQPD--------A-----DDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSL 358 (749)
Q Consensus 293 NG~GMs~eel~~~l-~fG~S~k~--------~-----~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf 358 (749)
||+||+++++.+.+ .++.|.+. . .+...||+||+||+++++ +|++++|.||+.+. .++.|.+
T Consensus 99 nGiGMt~edl~~~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfySaf~-vAdkV~V~Sr~~~~--~~~~W~s- 174 (666)
T 2o1u_A 99 TGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNND--TQHIWES- 174 (666)
T ss_dssp CSCCCCHHHHHHHTTC-------------------------------CTTGGGGG-TEEEEEEEEECTTS--CCEEEEE-
T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHH-HCCEEEEEEEECCC--CEEEEEE-
T ss_conf 8989899999999765525362888998640023553205542678807885987-55888999961897--4699999-
Q ss_pred CCCCEEEEEECCC---CCCCCCEEEEEECCCC-CCHHHHHHH-HHHHHCCCCHHHHH
Q ss_conf 4997018970522---4799938999725640-000255477-67430998502477
Q 004486 359 NQGKDNLEIPIVS---YYRKGQFMELDTVVQS-EATAKYNLK-SIKEFSPFNKYLIG 410 (749)
Q Consensus 359 ~~g~~~i~VPi~~---~~~~Gt~i~l~~~~~~-e~~~~~~L~-~I~kySPF~s~~I~ 410 (749)
.+ ..+.|.... -...||.|+++++.+. ++...+.++ +|.+||.|..+||.
T Consensus 175 -~g-g~~ti~~~~~~~~~~~GT~I~L~Lk~d~~Efle~~~I~~ivkkys~fi~~PI~ 229 (666)
T 2o1u_A 175 -DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIY 229 (666)
T ss_dssp -SS-SCCEEEECTTCCSSSSEEEEEEEECTTTTTSSSTTHHHHHHHHHSTTCCSCEE
T ss_pred -EC-CEEEEEECCCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEE
T ss_conf -58-86798755667789997389999766125443188999999998743798669
No 7
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=182.93 Aligned_cols=172 Identities=22% Similarity=0.279 Sum_probs=128.9
Q ss_pred CEEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCC----------------CCCEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 51453698-899973001227999999999863602499----------------9519999960002589985689999
Q 004486 229 KNFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSII 291 (749)
Q Consensus 229 ~~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~A----------------t~I~I~i~~~~~~~~~~~~~~L~I~ 291 (749)
...|++.- +.|..++.+.|+++..+|+|||+||+||++ ..+.|.|.. ..+...|+|.
T Consensus 5 ~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~------d~~~~~I~I~ 78 (677)
T 2cg9_A 5 TFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITP------KPEQKVLEIR 78 (677)
T ss_dssp EEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEE------EGGGTEEEEE
T ss_pred CEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEE------ECCCCEEEEE
T ss_conf 3433133999999988737798158798885389999998888752691320678772899999------3897889999
Q ss_pred ECCCCCCHHHHHHHH-HCCCCCC--------CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCC
Q ss_conf 399889977698652-2046899--------9899965443353011001112681899985279985059987704997
Q 004486 292 DDGHGMTHQDVVRMT-YFGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGK 362 (749)
Q Consensus 292 DNG~GMs~eel~~~l-~fG~S~k--------~~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~~g~ 362 (749)
|||+||+++++.+++ .++.|.+ ...+...||+||+||++|+| ++++++|.||+.+. .++.|.+ .+.
T Consensus 79 DnGiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~-vadkV~V~Sk~~~~--~~~~W~s--~g~ 153 (677)
T 2cg9_A 79 DSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDD--EQYIWES--NAG 153 (677)
T ss_dssp ECSCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGG-TEEEEEEEEECTTS--CEEEEEE--CSS
T ss_pred ECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCHHHHHHH-CCCEEEEEECCCCC--CEEEEEE--CCC
T ss_conf 789898999999998767035627788863122434441787712687751-57678999726998--5699998--599
Q ss_pred EEEEEEC-C--CCCCCCCEEEEEECCCC-CCHHHHHHHH-HHHHCCCCHHHHHH
Q ss_conf 0189705-2--24799938999725640-0002554776-74309985024777
Q 004486 363 DNLEIPI-V--SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE 411 (749)
Q Consensus 363 ~~i~VPi-~--~~~~~Gt~i~l~~~~~~-e~~~~~~L~~-I~kySPF~s~~I~e 411 (749)
..+.|.. . .-..+||.|+++++.+. ++...+.++. |.+||.|..+||..
T Consensus 154 ~~~ti~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l 207 (677)
T 2cg9_A 154 GSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207 (677)
T ss_dssp SEEEEEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEE
T ss_pred CEEEEEECCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 647986567778889970899997550002366999999999998608988698
No 8
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=1.00 E-value=1 Score=180.39 Aligned_cols=168 Identities=20% Similarity=0.311 Sum_probs=125.5
Q ss_pred EEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCC----------------CCCEEEEEECCCCCCCCCCCEEEEEEC
Q ss_conf 453698-899973001227999999999863602499----------------951999996000258998568999939
Q 004486 231 FVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDD 293 (749)
Q Consensus 231 ~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~A----------------t~I~I~i~~~~~~~~~~~~~~L~I~DN 293 (749)
.|++.- +.|..++.+.|+.+..+|+|||+||+||++ ..+.|.+.. ..+...|.|.||
T Consensus 9 ~Fqaei~~Ll~li~~~lYsn~eifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~i~~------d~~~~~l~I~Dn 82 (269)
T 1qy5_A 9 AFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTDT 82 (269)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEE------ETTTTEEEEEEC
T ss_pred EEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEE------CCCCEEEEEEEC
T ss_conf 63153999999998845598059999999999998874455531581112689716999998------289139999978
Q ss_pred CCCCCHHHHHHHH-HCCCCCCC--------C-----CCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEC
Q ss_conf 9889977698652-20468999--------8-----99965443353011001112681899985279985059987704
Q 004486 294 GHGMTHQDVVRMT-YFGHKQPD--------A-----DDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLN 359 (749)
Q Consensus 294 G~GMs~eel~~~l-~fG~S~k~--------~-----~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~ 359 (749)
|+||+++++.+.+ .++.|.+. . .+...||+||+||++++| +++++.|.|++.+. .++.|.+
T Consensus 83 GiGMt~edl~~~l~tia~Sgtk~F~~kl~~~~~~~~~d~~~IG~fGvGfySaf~-va~~v~V~Sk~~~~--~~~~w~s-- 157 (269)
T 1qy5_A 83 GVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNND--TQHIWES-- 157 (269)
T ss_dssp SCCCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHTCCCHHHHHHTTCGGGGGGG-TEEEEEEEEECTTS--CCEEEEE--
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH-CCCEEEEEEEECCC--CEEEEEE--
T ss_conf 888799999988644405453878776420013443441222776600888864-26669999995588--3799998--
Q ss_pred CCCEEEEEECCC---CCCCCCEEEEEECCCC-CCHHHHHHH-HHHHHCCCCHHHHH
Q ss_conf 997018970522---4799938999725640-000255477-67430998502477
Q 004486 360 QGKDNLEIPIVS---YYRKGQFMELDTVVQS-EATAKYNLK-SIKEFSPFNKYLIG 410 (749)
Q Consensus 360 ~g~~~i~VPi~~---~~~~Gt~i~l~~~~~~-e~~~~~~L~-~I~kySPF~s~~I~ 410 (749)
.+ ..+.|.... -..+||.|+++++.+. ++...+.++ +|.+||.|..+||.
T Consensus 158 ~g-g~~~i~~~~~~~~~~~GT~I~L~Lk~d~~e~le~~~i~~lvkkys~fi~~PI~ 212 (269)
T 1qy5_A 158 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIY 212 (269)
T ss_dssp CS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGSHHHHHHHHHTTCTTCSSCEE
T ss_pred EC-CEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 09-87899865677768999089999766310133389999999854034660069
No 9
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=1.00 E-value=1 Score=175.94 Aligned_cols=176 Identities=23% Similarity=0.293 Sum_probs=130.2
Q ss_pred CCCCCCEEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC----------------CCEEEEEECCCCCCCCCCC
Q ss_conf 3899851453698-8999730012279999999998636024999----------------5199999600025899856
Q 004486 224 AGPLEKNFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKAT----------------KLEISIESIYFKKAGKDIP 286 (749)
Q Consensus 224 ~~~~~~~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~At----------------~I~I~i~~~~~~~~~~~~~ 286 (749)
........|++.- +.|..++.+.|+.+..+|+|||+||+||+++ .+.|.+.. ..+..
T Consensus 6 ~~~~~~~~Fq~ei~~ll~ll~~~lYs~~~~~lrELi~NA~DA~~k~r~~~~~~~~~~~~~~~i~I~I~~------d~~~~ 79 (228)
T 3t0h_A 6 EEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDR 79 (228)
T ss_dssp --CCEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEE------ETTTT
T ss_pred CCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE------ECCEE
T ss_conf 255542688864998999999863289099999998788989999876641573013678865999999------69922
Q ss_pred EEEEEECCCCCCHHHHHHHH-HCCCCCCC--------CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEE
Q ss_conf 89999399889977698652-20468999--------8999654433530110011126818999852799850599877
Q 004486 287 MLSIIDDGHGMTHQDVVRMT-YFGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQS 357 (749)
Q Consensus 287 ~L~I~DNG~GMs~eel~~~l-~fG~S~k~--------~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~s 357 (749)
.|.|.|||+||+++++..++ .++.|.+. ..+...+|+||+||+++++ +++++.|.||+.+. .++.|.+
T Consensus 80 ~i~V~DnG~GMs~edl~~~l~~ia~S~~~~f~~~l~~~~~~~~iG~fG~G~~S~~~-vad~v~V~Sr~~~~--~~~~w~~ 156 (228)
T 3t0h_A 80 TLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDD--EQYAWES 156 (228)
T ss_dssp EEEEEECSCCCCHHHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTS--CEEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHC-CCCEEEEEEECCCC--CCEEEEE
T ss_conf 79998699897999999998756354322245553025776667987756899864-57879999841898--7279997
Q ss_pred ECCCCEEEEEECC--CCCCCCCEEEEEECCCC-CCHHHHHHH-HHHHHCCCCHHHHH
Q ss_conf 0499701897052--24799938999725640-000255477-67430998502477
Q 004486 358 LNQGKDNLEIPIV--SYYRKGQFMELDTVVQS-EATAKYNLK-SIKEFSPFNKYLIG 410 (749)
Q Consensus 358 f~~g~~~i~VPi~--~~~~~Gt~i~l~~~~~~-e~~~~~~L~-~I~kySPF~s~~I~ 410 (749)
.+...+.+... .-...||.|+++++.+. ++...+.+. +|.+|+.|..+||.
T Consensus 157 --~g~~~~~v~~~~~~~~~~GT~I~v~Lk~~~~E~~e~~~i~~iv~~~a~~l~~Pi~ 211 (228)
T 3t0h_A 157 --SAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT 211 (228)
T ss_dssp --CSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHSTTCSSCEE
T ss_pred --CCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf --3896378755677889999389999888236540088999999999851899759
No 10
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=1.00 E-value=1 Score=174.52 Aligned_cols=173 Identities=23% Similarity=0.296 Sum_probs=128.8
Q ss_pred CCCEEEECCH-HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC----------------CCEEEEEECCCCCCCCCCCEEE
Q ss_conf 9851453698-8999730012279999999998636024999----------------5199999600025899856899
Q 004486 227 LEKNFVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKAT----------------KLEISIESIYFKKAGKDIPMLS 289 (749)
Q Consensus 227 ~~~~~~~v~~-~~L~slst~h~~~pf~AIaELIDNA~DA~At----------------~I~I~i~~~~~~~~~~~~~~L~ 289 (749)
.....|++.- +.+..++.+.|+.+..+|+|||+||+||+++ .+.|.|.. ..+...|.
T Consensus 37 ~e~~~Fqaei~~Ll~ll~~~lYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~------d~~~~~I~ 110 (256)
T 3o0i_A 37 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDRTLT 110 (256)
T ss_dssp CEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEE
T ss_pred CEEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEE------CCCCEEEE
T ss_conf 403776753999999999861588099999998686989999988860581210578855999998------29910799
Q ss_pred EEECCCCCCHHHHHHHH-HCCCCCCC--------CCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECC
Q ss_conf 99399889977698652-20468999--------8999654433530110011126818999852799850599877049
Q 004486 290 IIDDGHGMTHQDVVRMT-YFGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQ 360 (749)
Q Consensus 290 I~DNG~GMs~eel~~~l-~fG~S~k~--------~~d~~~IG~FGiGfKsAsm~Lg~~v~V~Sk~~g~~s~~~ls~sf~~ 360 (749)
|.|||+||+++++..++ .++.|... ..+...||+||+||+++++ +++++.|.||+.+. .++.|.+.
T Consensus 111 I~DnG~GMt~edl~~~l~~ia~S~~~~f~~~L~~~~~~~~iG~fG~Gf~S~f~-Vadkv~V~Sr~~~~--~g~~w~s~-- 185 (256)
T 3o0i_A 111 IVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDD--EQYAWESS-- 185 (256)
T ss_dssp EEECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTS--CEEEEEEC--
T ss_pred EECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHC-CCCEEEEEECCCCC--CEEEEEEE--
T ss_conf 96389896999999998755165440055663025786655877616788646-58869999757998--66999994--
Q ss_pred CCEEEEEECC--CCCCCCCEEEEEECCCC-CCHHHHHHH-HHHHHCCCCHHHHH
Q ss_conf 9701897052--24799938999725640-000255477-67430998502477
Q 004486 361 GKDNLEIPIV--SYYRKGQFMELDTVVQS-EATAKYNLK-SIKEFSPFNKYLIG 410 (749)
Q Consensus 361 g~~~i~VPi~--~~~~~Gt~i~l~~~~~~-e~~~~~~L~-~I~kySPF~s~~I~ 410 (749)
+...+.+... .-...||.|+++++.+. ++...+.++ +|.+||.|..+||.
T Consensus 186 gg~~~~v~~~~~~~~~~GT~I~l~LK~~~~e~~e~~~I~~iv~k~s~~l~~PI~ 239 (256)
T 3o0i_A 186 AGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT 239 (256)
T ss_dssp STTEEEEEECCSSCCSSEEEEEEEECGGGGGGGCHHHHHHHHHHHCTTCSSCEE
T ss_pred CCCEEEEEECCCCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 461378866787878999089999767622214689999999999864899859
Done!